-
1
-
-
44449158814
-
Splicing, transcription, and chromatin: A ménage à trois
-
DOI 10.1016/j.gde.2008.01.006, PII S0959437X08000105
-
Allemand E, Batsche E, Muchardt C. 2008. Splicing, transcription, and chromatin: A ménage à trois. Curr Opin Genet Dev 18: 145-151. (Pubitemid 351756536)
-
(2008)
Current Opinion in Genetics and Development
, vol.18
, Issue.2
, pp. 145-151
-
-
Allemand, E.1
Batsche, E.2
Muchardt, C.3
-
2
-
-
0030575777
-
Naturally occurring nucleosome positioning signals in human exons and introns
-
DOI 10.1006/jmbi.1996.0592
-
Baldi P, Brunak S, Chauvin Y, Krogh A. 1996. Naturally occurring nucleosome positioning signals in human exons and introns. J Mol Biol 263: 503-510. (Pubitemid 26382069)
-
(1996)
Journal of Molecular Biology
, vol.263
, Issue.4
, pp. 503-510
-
-
Baldi, P.1
Brunak, S.2
Chauvin, Y.3
Krogh, A.4
-
3
-
-
20444380510
-
Spatial distribution of di- And tri-methyl lysine 36 of histone H3 at active genes
-
DOI 10.1074/jbc.M500796200
-
Bannister AJ, Schneider R, Myers FA, Thorne AW, Crane-Robinson C, Kouzarides T. 2005. Spatial distribution of di- and tri-methyl lysine 36 of histone H3 at active genes. J Biol Chem 280: 17732-17736. (Pubitemid 41389011)
-
(2005)
Journal of Biological Chemistry
, vol.280
, Issue.18
, pp. 17732-17736
-
-
Bannister, A.J.1
Schneider, R.2
Myers, F.A.3
Thorne, A.W.4
Crane-Robinson, C.5
Kouzarides, T.6
-
4
-
-
34249026300
-
High-Resolution Profiling of Histone Methylations in the Human Genome
-
DOI 10.1016/j.cell.2007.05.009, PII S0092867407006009
-
Barski A, Cuddapah S, Cui K, Roh TY, Schones DE, Wang Z, Wei G, Chepelev I, Zhao K. 2007. High-resolution profiling of histone methylations in the human genome. Cell 129: 823-837. (Pubitemid 46802390)
-
(2007)
Cell
, vol.129
, Issue.4
, pp. 823-837
-
-
Barski, A.1
Cuddapah, S.2
Cui, K.3
Roh, T.-Y.4
Schones, D.E.5
Wang, Z.6
Wei, G.7
Chepelev, I.8
Zhao, K.9
-
5
-
-
30044441988
-
The human SWI/SNF subunit Brm is a regulator of alternative splicing
-
DOI 10.1038/nsmb1030
-
Batsche E, Yaniv M, Muchardt C. 2006. The human SWI/SNF subunit Brm is a regulator of alternative splicing. Nat Struct Mol Biol 13: 22-29. (Pubitemid 43049398)
-
(2006)
Nature Structural and Molecular Biology
, vol.13
, Issue.1
, pp. 22-29
-
-
Batsche, E.1
Yaniv, M.2
Muchardt, C.3
-
6
-
-
0026027087
-
Splice junctions follow a 205-base ladder
-
Beckmann JS, Trifonov EN. 1991. Splice junctions follow a 205-base ladder. Proc Natl Acad Sci 88: 2380-2383.
-
(1991)
Proc Natl Acad Sci
, vol.88
, pp. 2380-2383
-
-
Beckmann, J.S.1
Trifonov, E.N.2
-
7
-
-
0028895417
-
Exon recognition in vertebrate splicing
-
Berget SM. 1995. Exon recognition in vertebrate splicing. J Biol Chem 270: 2411-2414.
-
(1995)
J Biol Chem
, vol.270
, pp. 2411-2414
-
-
Berget, S.M.1
-
8
-
-
0024021747
-
Splice site selection, rate of splicing, and alternative splicing on nascent transcripts
-
Beyer AL, Osheim YN. 1988. Splice site selection, rate of splicing, and alternative splicing on nascent transcripts. Genes & Dev 2: 754-765.
-
(1988)
Genes & Dev
, vol.2
, pp. 754-765
-
-
Beyer, A.L.1
Osheim, Y.N.2
-
10
-
-
27744577727
-
Histone H3 methylation by Set2 directs deacetylation of coding regions by Rpd3S to suppress spurious intragenic transcription
-
DOI 10.1016/j.cell.2005.10.023, PII S0092867405011566
-
Carrozza MJ, Li B, Florens L, Suganuma T, Swanson SK, Lee KK, Shia WJ, Anderson S, Yates J, Washburn MP, et al. 2005. Histone H3 methylation by Set2 directs deacetylation of coding regions by Rpd3S to suppress spurious intragenic transcription. Cell 123: 581-592. (Pubitemid 41608462)
-
(2005)
Cell
, vol.123
, Issue.4
, pp. 581-592
-
-
Carrozza, M.J.1
Li, B.2
Florens, L.3
Suganuma, T.4
Swanson, S.K.5
Lee, K.K.6
Shia, W.-J.7
Anderson, S.8
Yates, J.9
Washburn, M.P.10
Workman, J.L.11
-
11
-
-
64449088698
-
Continuous base identification for single-molecule nanopore DNA sequencing
-
Clarke J, Wu HC, Jayasinghe L, Patel A, Reid S, Bayley H. 2009. Continuous base identification for single-molecule nanopore DNA sequencing. Nat Nanotechnol 4: 265-270.
-
(2009)
Nat Nanotechnol
, vol.4
, pp. 265-270
-
-
Clarke, J.1
Wu, H.C.2
Jayasinghe, L.3
Patel, A.4
Reid, S.5
Bayley, H.6
-
12
-
-
0141888375
-
A slow RNA polymerase II affects alternative splicing in vivo
-
DOI 10.1016/j.molcel.2003.08.001
-
de la Mata M, Alonso CR, Kadener S, Fededa JP, Blaustein M, Pelisch F, Cramer P, Bentley D, Kornblihtt AR. 2003. A slow RNA polymerase II affects alternative splicing in vivo. Mol Cell 12: 525-532. (Pubitemid 37238937)
-
(2003)
Molecular Cell
, vol.12
, Issue.2
, pp. 525-532
-
-
De La Mata, M.1
Alonso, C.R.2
Kadener, S.3
Fededa, J.P.4
Blaustein, M.5
Pelisch, F.6
Cramer, P.7
Bentley, D.8
Kornblihtt, A.R.9
-
13
-
-
0033178886
-
Intron-exon structures of eukaryotic model organisms
-
DOI 10.1093/nar/27.15.3219
-
Deutsch M, Long M. 1999. Intron-exon structures of eukaryotic model organisms. Nucleic Acids Res 27: 3219-3228. (Pubitemid 29355739)
-
(1999)
Nucleic Acids Research
, vol.27
, Issue.15
, pp. 3219-3228
-
-
Deutsch, M.1
Long, M.2
-
14
-
-
38549139593
-
Dynamic histone H3 methylation during gene induction: HYPB/Setd2 mediates all H3K36 trimethylation
-
Edmunds JW, Mahadevan LC, Clayton AL. 2008. Dynamic histone H3 methylation during gene induction: HYPB/Setd2 mediates all H3K36 trimethylation. EMBO J 27: 406-420.
-
(2008)
EMBO J
, vol.27
, pp. 406-420
-
-
Edmunds, J.W.1
Mahadevan, L.C.2
Clayton, A.L.3
-
15
-
-
66749175352
-
Transcription-associated recombination in eukaryotes: Link between transcription, replication, and recombination
-
Gottipati P, Helleday T. 2009. Transcription-associated recombination in eukaryotes: Link between transcription, replication, and recombination. Mutagenesis 24: 203-210.
-
(2009)
Mutagenesis
, vol.24
, pp. 203-210
-
-
Gottipati, P.1
Helleday, T.2
-
16
-
-
33847076248
-
Chromatin Challenges during DNA Replication and Repair
-
DOI 10.1016/j.cell.2007.01.030, PII S0092867407001298
-
Groth A, Rocha W, Verreault A, Almouzni G. 2007. Chromatin challenges during DNA replication and repair. Cell 128: 721-733. (Pubitemid 46273574)
-
(2007)
Cell
, vol.128
, Issue.4
, pp. 721-733
-
-
Groth, A.1
Rocha, W.2
Verreault, A.3
Almouzni, G.4
-
18
-
-
38349127601
-
Combinatorial control of exon recognition
-
Hertel KJ. 2008. Combinatorial control of exon recognition. J Biol Chem 283: 1211-1215.
-
(2008)
J Biol Chem
, vol.283
, pp. 1211-1215
-
-
Hertel, K.J.1
-
20
-
-
33846039019
-
Ensembl 2007
-
Hubbard TJ, Aken BL, Beal K, Ballester B, Caccamo M, Chen Y, Clarke L, Coates G, Cunningham F, Cutts T, et al. 2007. Ensembl 2007. Nucleic Acids Res 35: D610-D617.
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Hubbard, T.J.1
Aken, B.L.2
Beal, K.3
Ballester, B.4
Caccamo, M.5
Chen, Y.6
Clarke, L.7
Coates, G.8
Cunningham, F.9
Cutts, T.10
-
21
-
-
38649129366
-
Diverse roles of hnRNP L in mammalian mRNA processing: A combined microarray and RNAi analysis
-
DOI 10.1261/rna.725208
-
Hung LH, Heiner M, Hui J, Schreiner S, Benes V, Bindereif A. 2008. Diverse roles of hnRNP L in mammalian mRNA processing: A combined microarray and RNAi analysis. RNA 14: 284-296. (Pubitemid 351171589)
-
(2008)
RNA
, vol.14
, Issue.2
, pp. 284-296
-
-
Hung, L.-H.1
Heiner, M.2
Hui, J.3
Schreiner, S.4
Benes, V.5
Bindereif, A.6
-
22
-
-
9244252580
-
Methylated lysine 79 of histone H3 targets 53BP1 to DNA double-strand breaks
-
DOI 10.1038/nature03114
-
Huyen Y, Zgheib O, Ditullio RA Jr, Gorgoulis VG, Zacharatos P, Petty TJ, Sheston EA, Mellert HS, Stavridi ES, Halazonetis TD. 2004. Methylated lysine 79 of histone H3 targets 53BP1 to DNA double-strand breaks. Nature 432: 406-411. (Pubitemid 39551676)
-
(2004)
Nature
, vol.432
, Issue.7015
, pp. 406-411
-
-
Huyen, Y.1
Zgheib, O.2
Ditullio Jr., R.A.3
Gorgoulis, V.G.4
Zacharatos, P.5
Petty, T.J.6
Sheston, E.A.7
Mellert, H.S.8
Stavridi, E.S.9
Halazonetis, T.D.10
-
23
-
-
60349089645
-
Nucleosome positioning and gene regulation: Advances through genomics
-
Jiang C, Pugh BF. 2009. Nucleosome positioning and gene regulation: Advances through genomics. Nat Rev Genet 10: 161-172.
-
(2009)
Nat Rev Genet
, vol.10
, pp. 161-172
-
-
Jiang, C.1
Pugh, B.F.2
-
24
-
-
20444429051
-
Gene splice sites correlate with nucleosome positions
-
DOI 10.1016/j.gene.2005.03.004, PII S0378111905001071
-
Kogan S, Trifonov EN. 2005. Gene splice sites correlate with nucleosome positions. Gene 352: 57-62. (Pubitemid 40804971)
-
(2005)
Gene
, vol.352
, Issue.1-2
, pp. 57-62
-
-
Kogan, S.1
Trifonov, E.N.2
-
25
-
-
61349098460
-
Differential chromatin marking of introns and expressed exons by H3K36me3
-
Kolasinska-Zwierz P, Down T, Latorre I, Liu T, Liu XS, Ahringer J. 2009. Differential chromatin marking of introns and expressed exons by H3K36me3. Nat Genet 41: 376-381.
-
(2009)
Nat Genet
, vol.41
, pp. 376-381
-
-
Kolasinska-Zwierz, P.1
Down, T.2
Latorre, I.3
Liu, T.4
Liu, X.S.5
Ahringer, J.6
-
26
-
-
30044440197
-
Chromatin, transcript elongation, and alternative splicing
-
Kornblihtt AR. 2006. Chromatin, transcript elongation, and alternative splicing. Nat Struct Mol Biol 13: 5-7.
-
(2006)
Nat Struct Mol Biol
, vol.13
, pp. 5-7
-
-
Kornblihtt, A.R.1
-
27
-
-
42449089029
-
Coupling transcription and alternative splicing
-
Kornblihtt AR. 2007. Coupling transcription and alternative splicing. Adv Exp Med Biol 623: 175-189.
-
(2007)
Adv Exp Med Biol
, vol.623
, pp. 175-189
-
-
Kornblihtt, A.R.1
-
28
-
-
4644334742
-
Multiple links between transcription and splicing
-
Kornblihtt AR, de la Mata M, Fededa JP, Munoz MJ, Nogues G. 2004. Multiple links between transcription and splicing. RNA 10: 1489-1498.
-
(2004)
RNA
, vol.10
, pp. 1489-1498
-
-
Kornblihtt, A.R.1
De La Mata, M.2
Fededa, J.P.3
Munoz, M.J.4
Nogues, G.5
-
29
-
-
34147168036
-
Transcription through chromatin by RNA polymerase II: Histone displacement and exchange
-
DOI 10.1016/j.mrfmmm.2006.05.040, PII S0027510707000346, Chromatin: Repair, Remodeling and Regulation
-
Kulaeva OI, Gaykalova DA, Studitsky VM. 2007. Transcription through chromatin by RNA polymerase II: Histone displacement and exchange. Mutat Res 618: 116-129. (Pubitemid 46574746)
-
(2007)
Mutation Research - Fundamental and Molecular Mechanisms of Mutagenesis
, vol.618
, Issue.1-2
, pp. 116-129
-
-
Kulaeva, O.I.1
Gaykalova, D.A.2
Studitsky, V.M.3
-
30
-
-
35348993743
-
Demethylation of H3K27 regulates polycomb recruitment and H2A ubiquitination
-
DOI 10.1126/science.1149042
-
Lee MG, Villa R, Trojer P, Norman J, Yan KP, Reinberg D, Di Croce L, Shiekhattar R. 2007. Demethylation of H3K27 regulates polycomb recruitment and H2A ubiquitination. Science 318: 447-450. (Pubitemid 47614529)
-
(2007)
Science
, vol.318
, Issue.5849
, pp. 447-450
-
-
Min, G.L.1
Villa, R.2
Trojer, P.3
Norman, J.4
Yan, K.-P.5
Reinberg, D.6
Di Croce, L.7
Shiekhattar, R.8
-
31
-
-
33847070442
-
The role of chromatin during transcription
-
Li B, Carey M, Workman JL. 2007. The role of chromatin during transcription. Cell 128: 707-719.
-
(2007)
Cell
, vol.128
, pp. 707-719
-
-
Li, B.1
Carey, M.2
Workman, J.L.3
-
32
-
-
4744355045
-
The WW domain-containing proteins interact with the early spliceosome and participate in pre-mRNA splicing in vivo
-
Lin KT, Lu RM, Tarn WY. 2004. The WW domain-containing proteins interact with the early spliceosome and participate in pre-mRNA splicing in vivo. Mol Cell Biol 24: 9176-9185.
-
(2004)
Mol Cell Biol
, vol.24
, pp. 9176-9185
-
-
Lin, K.T.1
Lu, R.M.2
Tarn, W.Y.3
-
33
-
-
34547624303
-
Genome-wide maps of chromatin state in pluripotent and lineage-committed cells
-
DOI 10.1038/nature06008, PII NATURE06008
-
Mikkelsen TS, Ku M, Jaffe DB, Issac B, Lieberman E, Giannoukos G, Alvarez P, Brockman W, Kim TK, Koche RP, et al. 2007. Genome-wide maps of chromatin state in pluripotent and lineage-committed cells. Nature 448: 553-560. (Pubitemid 47206934)
-
(2007)
Nature
, vol.448
, Issue.7153
, pp. 553-560
-
-
Mikkelsen, T.S.1
Ku, M.2
Jaffe, D.B.3
Issac, B.4
Lieberman, E.5
Giannoukos, G.6
Alvarez, P.7
Brockman, W.8
Kim, T.-K.9
Koche, R.P.10
Lee, W.11
Mendenhall, E.12
O'Donovan, A.13
Presser, A.14
Russ, C.15
Xie, X.16
Meissner, A.17
Wernig, M.18
Jaenisch, R.19
Nusbaum, C.20
Lander, E.S.21
Bernstein, B.E.22
more..
-
34
-
-
0034704145
-
The splicing factor, Prp40, binds the phosphorylated carboxyl-terminal domain of RNA polymerase II
-
Morris DP, Greenleaf AL. 2000. The splicing factor, Prp40, binds the phosphorylated carboxyl-terminal domain of RNA polymerase II. J Biol Chem 275: 39935-39943.
-
(2000)
J Biol Chem
, vol.275
, pp. 39935-39943
-
-
Morris, D.P.1
Greenleaf, A.L.2
-
35
-
-
0037107547
-
On the importance of being co-transcriptional
-
Neugebauer KM. 2002. On the importance of being co-transcriptional. J Cell Sci 115: 3865-3871.
-
(2002)
J Cell Sci
, vol.115
, pp. 3865-3871
-
-
Neugebauer, K.M.1
-
36
-
-
48749100692
-
Regulation of CD45 alternative splicing by heterogeneous ribonucleoprotein, hnRNPLL
-
Oberdoerffer S, Moita LF, Neems D, Freitas RP, Hacohen N, Rao A. 2008. Regulation of CD45 alternative splicing by heterogeneous ribonucleoprotein, hnRNPLL. Science 321: 686-691.
-
(2008)
Science
, vol.321
, pp. 686-691
-
-
Oberdoerffer, S.1
Moita, L.F.2
Neems, D.3
Freitas, R.P.4
Hacohen, N.5
Rao, A.6
-
37
-
-
44649196386
-
Functional integration of transcriptional and RNA processing machineries
-
Pandit S, Wang D, Fu XD. 2008. Functional integration of transcriptional and RNA processing machineries. Curr Opin Cell Biol 20: 260-265.
-
(2008)
Curr Opin Cell Biol
, vol.20
, pp. 260-265
-
-
Pandit, S.1
Wang, D.2
Fu, X.D.3
-
38
-
-
19444363834
-
53BP1 exchanges slowly at the sites of DNA damage and appears to require RNA for its association with chromatin
-
DOI 10.1242/jcs.02336
-
Pryde F, Khalili S, Robertson K, Selfridge J, Ritchie AM, Melton DW, Jullien D, Adachi Y. 2005. 53BP1 exchanges slowly at the sites of DNA damage and appears to require RNA for its association with chromatin. J Cell Sci 118: 2043-2055. (Pubitemid 40723847)
-
(2005)
Journal of Cell Science
, vol.118
, Issue.9
, pp. 2043-2055
-
-
Pryde, F.1
Khalili, S.2
Robertson, K.3
Selfridge, J.4
Ritchie, A.-M.5
Melton, D.W.6
Jullien, D.7
Adachi, Y.8
-
39
-
-
5344244656
-
-
R Development Core Team. R Foundation for Statistical Computing, Vienna, Austria
-
R Development Core Team. 2008. R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria.
-
(2008)
R: A Language and Environment for Statistical Computing
-
-
-
40
-
-
58449116917
-
Chromatin-associated periodicity in genetic variation downstream of transcriptional start sites
-
Sasaki S, Mello CC, Shimada A, Nakatani Y, Hashimoto S, Ogawa M, Matsushima K, Gu SG, Kasahara M, Ahsan B, et al. 2009. Chromatin-associated periodicity in genetic variation downstream of transcriptional start sites. Science 323: 401-404.
-
(2009)
Science
, vol.323
, pp. 401-404
-
-
Sasaki, S.1
Mello, C.C.2
Shimada, A.3
Nakatani, Y.4
Hashimoto, S.5
Ogawa, M.6
Matsushima, K.7
Gu, S.G.8
Kasahara, M.9
Ahsan, B.10
-
41
-
-
39449088572
-
Genome-wide approaches to studying chromatin modifications
-
DOI 10.1038/nrg2270, PII NRG2270
-
Schones DE, Zhao K. 2008. Genome-wide approaches to studying chromatin modifications. Nat Rev Genet 9: 179-191. (Pubitemid 351271798)
-
(2008)
Nature Reviews Genetics
, vol.9
, Issue.3
, pp. 179-191
-
-
Schones, D.E.1
Zhao, K.2
-
42
-
-
39749145198
-
Dynamic Regulation of Nucleosome Positioning in the Human Genome
-
DOI 10.1016/j.cell.2008.02.022, PII S0092867408002705
-
Schones DE, Cui K, Cuddapah S, Roh TY, Barski A, Wang Z, Wei G, Zhao K. 2008. Dynamic regulation of nucleosome positioning in the human genome. Cell 132: 887-898. (Pubitemid 351312809)
-
(2008)
Cell
, vol.132
, Issue.5
, pp. 887-898
-
-
Schones, D.E.1
Cui, K.2
Cuddapah, S.3
Roh, T.-Y.4
Barski, A.5
Wang, Z.6
Wei, G.7
Zhao, K.8
-
43
-
-
38549165276
-
Drosophila UTX is a histone H3 Lys27 demethylase that colocalizes with the elongating form of RNA polymerase II
-
DOI 10.1128/MCB.01504-07
-
Smith ER, Lee MG, Winter B, Droz NM, Eissenberg JC, Shiekhattar R, Shilatifard A. 2008. Drosophila UTX is a histone H3 Lys27 demethylase that colocalizes with the elongating form of RNA polymerase II. Mol Cell Biol 28: 1041-1046. (Pubitemid 351160060)
-
(2008)
Molecular and Cellular Biology
, vol.28
, Issue.3
, pp. 1041-1046
-
-
Smith, E.R.1
Min, G.L.2
Winter, B.3
Droz, N.M.4
Eissenberg, J.C.5
Shiekhattar, R.6
Shilatifard, A.7
-
44
-
-
19344363599
-
Quality control of messenger ribonucleoprotein particles in the nucleus and at the pore
-
DOI 10.1016/j.ceb.2005.04.007, PII S0955067405000499, Nucleus and Gene Expression
-
Sommer P, Nehrbass U. 2005. Quality control of messenger ribonucleoprotein particles in the nucleus and at the pore. Curr Opin Cell Biol 17: 294-301. (Pubitemid 40719920)
-
(2005)
Current Opinion in Cell Biology
, vol.17
, Issue.3
, pp. 294-301
-
-
Sommer, P.1
Nehrbass, U.2
-
45
-
-
11144358198
-
A gene atlas of the mouse and human protein-encoding transcriptomes
-
DOI 10.1073/pnas.0400782101
-
Su AI, Wiltshire T, Batalov S, Lapp H, Ching KA, Block D, Zhang J, Soden R, Hayakawa M, Kreiman G, et al. 2004. A gene atlas of the mouse and human protein-encoding transcriptomes. Proc Natl Acad Sci 101: 6062-6067. (Pubitemid 38520528)
-
(2004)
Proceedings of the National Academy of Sciences of the United States of America
, vol.101
, Issue.16
, pp. 6062-6067
-
-
Su, A.I.1
Wiltshire, T.2
Batalov, S.3
Lapp, H.4
Ching, K.A.5
Block, D.6
Zhang, J.7
Soden, R.8
Hayakawa, M.9
Kreiman, G.10
Cooke, M.P.11
Walker, J.R.12
Hogenesch, J.B.13
-
46
-
-
46449103738
-
A high-resolution, nucleosome position map of C. elegans reveals a lack of universal sequence-dictated positioning
-
DOI 10.1101/gr.076463.108
-
Valouev A, Ichikawa J, Tonthat T, Stuart J, Ranade S, Peckham H, Zeng K, Malek JA, Costa G, McKernan K, et al. 2008. A high-resolution, nucleosome position map of C. elegans reveals a lack of universal sequence-dictated positioning. Genome Res 18: 1051-1063. (Pubitemid 351931156)
-
(2008)
Genome Research
, vol.18
, Issue.7
, pp. 1051-1063
-
-
Valouev, A.1
Ichikawa, J.2
Tonthat, T.3
Stuart, J.4
Ranade, S.5
Peckham, H.6
Zeng, K.7
Malek, J.A.8
Costa, G.9
McKernan, K.10
Sidow, A.11
Fire, A.12
Johnson, S.M.13
-
47
-
-
46249112085
-
Combinatorial patterns of histone acetylations and methylations in the human genome
-
DOI 10.1038/ng.154, PII NG154
-
Wang Z, Zang C, Rosenfeld JA, Schones DE, Barski A, Cuddapah S, Cui K, Roh TY, Peng W, Zhang MQ, et al. 2008. Combinatorial patterns of histone acetylations and methylations in the human genome. Nat Genet 40: 897-903. (Pubitemid 351913645)
-
(2008)
Nature Genetics
, vol.40
, Issue.7
, pp. 897-903
-
-
Wang, Z.1
Zang, C.2
Rosenfeld, J.A.3
Schones, D.E.4
Barski, A.5
Cuddapah, S.6
Cui, K.7
Roh, T.-Y.8
Peng, W.9
Zhang, M.Q.10
Zhao, K.11
-
48
-
-
57149100569
-
The impact of the nucleosome code on protein-coding sequence evolution in yeast
-
Warnecke T, Batada NN, Hurst LD. 2008. The impact of the nucleosome code on protein-coding sequence evolution in yeast. PLoS Genet 4: e1000250.
-
(2008)
PLoS Genet
, vol.4
-
-
Warnecke, T.1
Batada, N.N.2
Hurst, L.D.3
-
49
-
-
56649089682
-
Evolutionary footprints of nucleosome positions in yeast
-
Washietl S, Machne R, Goldman N. 2008. Evolutionary footprints of nucleosome positions in yeast. Trends Genet 24: 583-587.
-
(2008)
Trends Genet
, vol.24
, pp. 583-587
-
-
Washietl, S.1
Machne, R.2
Goldman, N.3
-
50
-
-
33846525436
-
The Spt6 SH2 domain binds Ser2-P RNAPII to direct Iws1-dependent mRNA splicing and export
-
DOI 10.1101/gad.1503107
-
Yoh SM, Cho H, Pickle L, Evans RM, Jones KA. 2007. The Spt6 SH2 domain binds Ser2-P RNAPII to direct Iws1-dependent mRNA splicing and export. Genes & Dev 21: 160-174. (Pubitemid 46155810)
-
(2007)
Genes and Development
, vol.21
, Issue.2
, pp. 160-174
-
-
Yoh, S.M.1
Cho, H.2
Pickle, L.3
Evans, R.M.4
Jones, K.A.5
-
51
-
-
58049206591
-
The Iws1:Spt6:CTD complex controls cotranscriptional mRNA biosynthesis and HYPB/Setd2-mediated histone H3K36 methylation
-
Yoh SM, Lucas JS, Jones KA. 2008. The Iws1:Spt6:CTD complex controls cotranscriptional mRNA biosynthesis and HYPB/Setd2-mediated histone H3K36 methylation. Genes & Dev 22: 3422-3434.
-
(2008)
Genes & Dev
, vol.22
, pp. 3422-3434
-
-
Yoh, S.M.1
Lucas, J.S.2
Jones, K.A.3
-
52
-
-
22744432660
-
Genome-scale identification of nucleosome positions in S. cerevisiae
-
Yuan GC, Liu YJ, Dion MF, Slack MD, Wu LF, Altschuler SJ, Rando OJ. 2005. Genome-scale identification of nucleosome positions in S. cerevisiae. Science 309: 626-630.
-
(2005)
Science
, vol.309
, pp. 626-630
-
-
Yuan, G.C.1
Liu, Y.J.2
Dion, M.F.3
Slack, M.D.4
Wu, L.F.5
Altschuler, S.J.6
Rando, O.J.7
-
53
-
-
67650120109
-
Heterogeneous nuclear Rribonucleoprotein L is a subunit of human KMT3a/Set2 complex required for H3 Lys-36 trimethylation activity in vivo
-
Yuan W, Xie J, Long C, Erdjument-Bromage H, Ding X, Zheng Y, Tempst P, Chen S, Zhu B, Reinberg D. 2009. Heterogeneous nuclear Rribonucleoprotein L is a subunit of human KMT3a/Set2 complex required for H3 Lys-36 trimethylation activity in vivo. J Biol Chem 284: 15701-15707.
-
(2009)
J Biol Chem
, vol.284
, pp. 15701-15707
-
-
Yuan, W.1
Xie, J.2
Long, C.3
Erdjument-Bromage, H.4
Ding, X.5
Zheng, Y.6
Tempst, P.7
Chen, S.8
Zhu, B.9
Reinberg, D.10
|