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Volumn 49, Issue 8, 2009, Pages 1963-1973

Docking and 3D-QSAR studies on isatin sulfonamide analogues as caspase-3 inhibitors

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACIDS; BINDING ENERGY; CELL DEATH; COMPUTATIONAL CHEMISTRY; HYDROPHOBICITY; LIGANDS; MOLECULAR GRAPHICS; SULFUR COMPOUNDS;

EID: 69549129599     PISSN: 15499596     EISSN: 1549960X     Source Type: Journal    
DOI: 10.1021/ci900144x     Document Type: Article
Times cited : (39)

References (34)
  • 1
    • 0030947095 scopus 로고    scopus 로고
    • Programmed cell death in animal development
    • DOI 10.1016/S0092-8674(00)81873-5
    • (1) Jacobson, M. D.; Weil, M.; Raff, M. C. Programmed cell death in animal development. Cell 1997, 88, 347-354 (Pubitemid 27131376)
    • (1997) Cell , vol.88 , Issue.3 , pp. 347-354
    • Jacobson, M.D.1    Weil, M.2    Raff, M.C.3
  • 2
    • 0028943734 scopus 로고
    • Apoptosis in the pathogenesis and treatment of disease
    • Thompson, C. B. Apoptosis in the pathogenesis and treatment of disease. Science 1995, 267, 1456-1462
    • (1995) Science , vol.267 , pp. 1456-1462
    • Thompson, C.B.1
  • 3
    • 0036463649 scopus 로고    scopus 로고
    • Apoptosis-based therapies
    • Reed, J. C. Apoptosis-based therapies. Nat. Rev. Drug Discovery 2002, 7, 111-121
    • (2002) Nat. Rev. Drug Discovery , vol.7 , pp. 111-121
    • Reed, J.C.1
  • 4
    • 35449007304 scopus 로고    scopus 로고
    • Apoptosis: Potential therapeutic targets for new drug discovery
    • DOI 10.2174/092986707781745569
    • (4) Jana, S.; Paliwal, J. Apoptosis: potential therapeutic targets for new drug discovery. Curr. Med. Chem. 2007, 14, 2369-2379 (Pubitemid 47618045)
    • (2007) Current Medicinal Chemistry , vol.14 , Issue.22 , pp. 2369-2379
    • Jana, S.1    Paliwal, J.2
  • 6
    • 0344142396 scopus 로고    scopus 로고
    • Emerging roles of caspase-3 in apoptosis
    • Porter, A. G.; Janicke, R. U. Emerging roles of caspase-3 in apoptosis. Cell Death Differ. 1999, 6, 99-104.
    • (1999) Cell Death Differ. , vol.6 , pp. 99-104
    • Porter, A.G.1    Janicke, R.U.2
  • 10
    • 28144443339 scopus 로고    scopus 로고
    • N-Benzylisatin sulfonamide analogues as potent caspase-3 inhibitors: Synthesis, in vitro activity, and molecular modeling studies
    • Chu, W.; Zhang, J.; Zeng, C.; Rothfuss, J.; Tu, Z.; Chu, Y.; Reichert, D. E.; Welch, M. J.; Mach, R. H. N-Benzylisatin sulfonamide analogues as potent caspase-3 inhibitors: Synthesis, in vitro activity, and molecular modeling studies. J. Med. Chem. 2005, 48, 7637-7647
    • (2005) J. Med. Chem. , vol.48 , pp. 7637-7647
    • Chu, W.1    Zhang, J.2    Zeng, C.3    Rothfuss, J.4    Tu, Z.5    Chu, Y.6    Reichert, D.E.7    Welch, M.J.8    Mach, R.H.9
  • 11
    • 34547593361 scopus 로고    scopus 로고
    • Isatin sulfonamide analogs containing a Michael addition acceptor: A new class of caspase 3/7 inhibitors
    • Chu, W.; Rothfuss, J.; d'Avignon, A.; Zeng, C.; Zhou, D.; Hotchkiss, R. S.; Mach, R. H. Isatin sulfonamide analogs containing a Michael addition acceptor: A new class of caspase 3/7 inhibitors. J. Med. Chem. 2007, 50, 3751-3755
    • (2007) J. Med. Chem. , vol.50 , pp. 3751-3755
    • Chu, W.1    Rothfuss, J.2    D'Avignon, A.3    Zeng, C.4    Zhou, D.5    Hotchkiss, R.S.6    Mach, R.H.7
  • 13
    • 0037027922 scopus 로고    scopus 로고
    • A Novel nonpeptidic caspase-3/7 inhibitor, (S)-(+)-5-[l-(2- methoxymethylpyrrolidinyl)sulfonyl]isatin reduces myocardial ischemic injury
    • Chapman, J. G.; Magee, W. P.; Stukenbrok, H. A.; Beckius, G. E.; Milici, A. J.; Tracey, W. R. A Novel nonpeptidic caspase-3/7 inhibitor, (S)-(+)-5-[l-(2-methoxymethylpyrrolidinyl)sulfonyl]isatin reduces myocardial ischemic injury. Eur. J. Pharmacol. 2002, 456, 59-68.
    • (2002) Eur. J. Pharmacol. , vol.456 , pp. 59-68
    • Chapman, J.G.1    Magee, W.P.2    Stukenbrok, H.A.3    Beckius, G.E.4    Milici, A.J.5    Tracey, W.R.6
  • 15
    • 10644282148 scopus 로고    scopus 로고
    • The protein structures that shape caspase activity, specificity, activation and inhibition
    • Fuentes-Prior, P.; Salvesen, G. S. The protein structures that shape caspase activity, specificity, activation and inhibition. Biochem J. 2004, 384, 201-232
    • (2004) Biochem J. , vol.384 , pp. 201-232
    • Fuentes-Prior, P.1    Salvesen, G.S.2
  • 16
    • 0038306254 scopus 로고    scopus 로고
    • Conformational restrictions in the active site of unliganded human caspase-3
    • Ni, C. Z.; Li, C.; Wu, J. C.; Spada, A. P.; Ely, K. R. Conformational restrictions in the active site of unliganded human caspase-3. J. Mol. Recognit 2003, 76, 121-124
    • (2003) J. Mol. Recognit , vol.76 , pp. 121-124
    • Ni, C.Z.1    Li, C.2    Wu, J.C.3    Spada, A.P.4    Ely, K.R.5
  • 17
    • 0023751431 scopus 로고
    • Comparative molecular field analysis (CoMFA). 1. Effect of shape on binding of steroids to carrier proteins
    • DOI 10.1021/ja00226a005
    • (17) Cramer, R.; Patterson, D.; Bunce, J. Comparative molecular field analysis (CoMFA). 1. Effect of shape on binding of steroids to carrier proteins. J. Am. Chem. Soc. 1988, 110, 5959-5967. (Pubitemid 18213690)
    • (1988) Journal of the American Chemical Society , vol.110 , Issue.18 , pp. 5959-5967
    • Cramer III, R.D.1    Patterson, D.E.2    Bunce, J.D.3
  • 18
    • 0027944195 scopus 로고
    • Molecular similarity indices in a comparative analysis (CoMSIA) of drug molecules to correlate and predict their biological activity
    • DOI 10.1021/jm00050a010
    • (18) Klebe, G.; Abraham, U.; Mietzner, T. Molecular similarity indices in a comparative analysis (CoMSIA) of drug molecules to correlate and predict their biological activity. J. Med. Chem. 1994, 37, 4130-4146 (Pubitemid 24379702)
    • (1994) Journal of Medicinal Chemistry , vol.37 , Issue.24 , pp. 4130-4146
    • Klebe, G.1    Abraham, U.2    Mietzner, T.3
  • 19
    • 33751550276 scopus 로고    scopus 로고
    • Development of quantitative structure-activity relationships and its application in rational drug design
    • DOI 10.2174/138161206779010431
    • (19) Yang, G. F.; Huang, X. Development of quantitative structure-activity relationships and its application in rational drug design. Curr. Pharm. Des. 2006, 72, 4601-4611 (Pubitemid 44835148)
    • (2006) Current Pharmaceutical Design , vol.12 , Issue.35 , pp. 4601-4611
    • Yang, G.-F.1    Huang, X.2
  • 20
    • 34547440762 scopus 로고    scopus 로고
    • Whither combine? New opportunities for receptor-based QSAR
    • Lushington, G. H.; Guo, J. X.; Wang, J. L. Whither combine? New opportunities for receptor-based QSAR. Curr. Med. Chem. 2007,14, 1863-1877
    • (2007) Curr. Med. Chem. , vol.14 , pp. 1863-1877
    • Lushington, G.H.1    Guo, J.X.2    Wang, J.L.3
  • 21
    • 4043062916 scopus 로고    scopus 로고
    • De novo drug design: Integration of structure-based and ligand-based methods
    • Dean, P. M.; Lloyd, D. G.; Todorov, N. P. De novo drug design: integration of structure-based and ligand-based methods. Curr. Opin. Drug Discovery Dev. 2004, 7, 347-353
    • (2004) Curr. Opin. Drug Discovery Dev. , vol.7 , pp. 347-353
    • Dean, P.M.1    Lloyd, D.G.2    Todorov, N.P.3
  • 23
    • 0032972812 scopus 로고    scopus 로고
    • Three-dimensional quantitative structure-activity relationship of interleukin 1-β converting enzyme inhibitors: A comparative molecular field analysis study
    • DOI 10.1021/jm9708442
    • (23) Kulkarni, S. S.; Kulkarni, V. M. Three-dimensional quantitative structure-activity relationship of interleukin 1-beta converting enzyme inhibitors: A comparative molecular field analysis study. J. Med. Chem. 1999, 42, 373-380 (Pubitemid 29085097)
    • (1999) Journal of Medicinal Chemistry , vol.42 , Issue.3 , pp. 373-380
    • Kulkarni, S.S.1    Kulkarni, V.M.2
  • 24
    • 65249096525 scopus 로고    scopus 로고
    • Synthesis and in vitro evaluation of sulfonamide isatin Michael acceptors as small molecule inhibitors of caspase-6
    • Chu, W.; Rothfuss, J.; Chu, Y.; Zhou, D.; Mach, R. H. Synthesis and in vitro evaluation of sulfonamide isatin Michael acceptors as small molecule inhibitors of caspase-6. J. Med. Chem. 2009, 52, 2188-2191
    • (2009) J. Med. Chem. , vol.52 , pp. 2188-2191
    • Chu, W.1    Rothfuss, J.2    Chu, Y.3    Zhou, D.4    Mach, R.H.5
  • 25
    • 0028854034 scopus 로고
    • Molecular recognition of receptor sites using a genetic algorithm with a description of desolvation
    • Jones, G.; Willett, P.; Glen, R. C. Molecular recognition of receptor sites using a genetic algorithm with a description of desolvation. J. Mol. Biol. 1995, 245, 43-53.
    • (1995) J. Mol. Biol. , vol.245 , pp. 43-53
    • Jones, G.1    Willett, P.2    Glen, R.C.3
  • 26
    • 0031552362 scopus 로고    scopus 로고
    • Development and validation of a genetic algorithm for flexible docking
    • Jones, G.; Willett, P.; Glen, R. C.; Leach, A. R.; Taylor, R. Development and validation of a genetic algorithm for flexible docking. J. Mol. Biol. 1997, 267, 727-748
    • (1997) J. Mol. Biol. , vol.267 , pp. 727-748
    • Jones, G.1    Willett, P.2    Glen, R.C.3    Leach, A.R.4    Taylor, R.5
  • 29
    • 36949022890 scopus 로고    scopus 로고
    • Predictive QSAR modeling workflow, model applicability domains, and virtual screening
    • DOI 10.2174/138161207782794257
    • (29) Tropsha, A.; Golbraikh, A. Predictive QSAR modeling workflow, model applicability domains, and virtual screening. Curr. Pharm. Des. 2007, 13, 3494-3504 (Pubitemid 350238939)
    • (2007) Current Pharmaceutical Design , vol.13 , Issue.34 , pp. 3494-3504
    • Tropsha, A.1    Golbraikh, A.2
  • 31
    • 0347361642 scopus 로고    scopus 로고
    • Lessons in Molecular Recognition: The Effects of Ligand and Protein Flexibility on Molecular Docking Accuracy
    • DOI 10.1021/jm030209y
    • (31) Erickson, J. A.; Jalaie, M.; Robertson, D. H.; Lewis, R. A.; Vieth, M. Lessons in Molecular Recognition: The Effects of Ligand and Protein Flexibility on Molecular Docking Accuracy. J. Med. Chem. 2004, 47, 45-55. (Pubitemid 38040489)
    • (2004) Journal of Medicinal Chemistry , vol.47 , Issue.1 , pp. 45-55
    • Erickson, J.A.1    Jalaie, M.2    Robertson, D.H.3    Lewis, R.A.4    Vieth, M.5
  • 33
    • 0002711260 scopus 로고    scopus 로고
    • 13th European Symposium on Quantitative Structure-Activity Relationships, 2001; Holtje, H. D., Sippl, W., Eds.; Prous Science
    • Clark, R. D.; Sprous, D. G.; Leonard, J. M. In Validating Models Based on Large Dataset; 13th European Symposium on Quantitative Structure-Activity Relationships, 2001; Holtje, H. D., Sippl, W., Eds.; Prous Science: 2001; pp 475-485.
    • (2001) Validating Models Based on Large Dataset , pp. 475-485
    • Clark, R.D.1    Sprous, D.G.2    Leonard, J.M.3
  • 34
    • 0028922586 scopus 로고
    • LIGPLOT: A program to generate schematic diagrams of protein-ligand interactions
    • Wallace, A. C.; Laskowski, R. A.; Thornton, J. M. LIGPLOT: a program to generate schematic diagrams of protein-ligand interactions. Protein Eng. 1995, 8, 127-134
    • (1995) Protein Eng. , vol.8 , pp. 127-134
    • Wallace, A.C.1    Laskowski, R.A.2    Thornton, J.M.3


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