-
2
-
-
0025106975
-
Sequence analysis suggests that tetra-nucleotides signal the termination of protein synthesis in eukaryotes
-
Brown C.M., Stockwell P.A., Trotman C.N., and Tate W.P. Sequence analysis suggests that tetra-nucleotides signal the termination of protein synthesis in eukaryotes. Nucleic Acids Res. 18 (1990) 6339-6345
-
(1990)
Nucleic Acids Res.
, vol.18
, pp. 6339-6345
-
-
Brown, C.M.1
Stockwell, P.A.2
Trotman, C.N.3
Tate, W.P.4
-
3
-
-
0021909735
-
Amber, ochre and opal suppressor tRNA genes derived from a human serine tRNA gene
-
Capone J.P., Sharp P.A., and RajBhandary U.L. Amber, ochre and opal suppressor tRNA genes derived from a human serine tRNA gene. EMBO J. 4 (1985) 213-221
-
(1985)
EMBO J.
, vol.4
, pp. 213-221
-
-
Capone, J.P.1
Sharp, P.A.2
RajBhandary, U.L.3
-
4
-
-
3042718952
-
Biochemical and functional analysis of a 9-nt RNA sequence that affects translation efficiency in eukaryotic cells
-
Chappell S.A., Edelman G.M., and Mauro V.P. Biochemical and functional analysis of a 9-nt RNA sequence that affects translation efficiency in eukaryotic cells. Proc. Natl. Acad. Sci. USA 101 (2004) 9590-9594
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 9590-9594
-
-
Chappell, S.A.1
Edelman, G.M.2
Mauro, V.P.3
-
5
-
-
13944276301
-
A preformed compact ribosome-binding domain in the cricket paralysis-like virus IRES RNAs
-
Costantino D., and Kieft J.S. A preformed compact ribosome-binding domain in the cricket paralysis-like virus IRES RNAs. RNA 11 (2005) 332-343
-
(2005)
RNA
, vol.11
, pp. 332-343
-
-
Costantino, D.1
Kieft, J.S.2
-
7
-
-
36749042932
-
Translation initiation by viral internal ribosome entry sites
-
Matthews M.B., Sonenberg N., and Hershey J.W.B. (Eds), Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
-
Doudna J.A., and Sarnow P. Translation initiation by viral internal ribosome entry sites. In: Matthews M.B., Sonenberg N., and Hershey J.W.B. (Eds). Translation Control in Biology and Medicine (2007), Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY 129-153
-
(2007)
Translation Control in Biology and Medicine
, pp. 129-153
-
-
Doudna, J.A.1
Sarnow, P.2
-
8
-
-
0031842442
-
Initiation of protein synthesis in mammalian cells with codons other than AUG and amino acids other than methionine
-
Drabkin H.J., and RajBhandary U.L. Initiation of protein synthesis in mammalian cells with codons other than AUG and amino acids other than methionine. Mol. Cell. Biol. 18 (1998) 5140-5147
-
(1998)
Mol. Cell. Biol.
, vol.18
, pp. 5140-5147
-
-
Drabkin, H.J.1
RajBhandary, U.L.2
-
9
-
-
0031952186
-
Initiator-elongator discrimination in vertebrate tRNAs for protein synthesis
-
Drabkin H.J., Estrella M., and RajBhandary U.L. Initiator-elongator discrimination in vertebrate tRNAs for protein synthesis. Mol. Cell. Biol. 18 (1998) 1459-1466
-
(1998)
Mol. Cell. Biol.
, vol.18
, pp. 1459-1466
-
-
Drabkin, H.J.1
Estrella, M.2
RajBhandary, U.L.3
-
10
-
-
23144433640
-
-
Academic Press, London
-
Fauquet C.M., Mayo M.A., Maniloff J., Desselberger U., and Ball L.A. Virus Taxonomy: VIIIth Report of the International Committee on Taxonomy of Viruses (2004), Academic Press, London
-
(2004)
Virus Taxonomy: VIIIth Report of the International Committee on Taxonomy of Viruses
-
-
Fauquet, C.M.1
Mayo, M.A.2
Maniloff, J.3
Desselberger, U.4
Ball, L.A.5
-
11
-
-
0037166289
-
Regulation of internal ribosomal entry site-mediated translation by phosphorylation of the translation initiation factor eIF2α
-
Fernandez J., Yaman I., Sarnow P., Snider M.D., and Hatzoglou M. Regulation of internal ribosomal entry site-mediated translation by phosphorylation of the translation initiation factor eIF2α. J. Biol. Chem. 277 (2002) 19198-19205
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 19198-19205
-
-
Fernandez, J.1
Yaman, I.2
Sarnow, P.3
Snider, M.D.4
Hatzoglou, M.5
-
12
-
-
64049105338
-
The pathway of hepatitis C virus mRNA recruitment to the human ribosome
-
Fraser C.S., Hershey J.W.B., and Doudna J.A. The pathway of hepatitis C virus mRNA recruitment to the human ribosome. Nat. Struct. Mol. Biol. 16 (2009) 397-404
-
(2009)
Nat. Struct. Mol. Biol.
, vol.16
, pp. 397-404
-
-
Fraser, C.S.1
Hershey, J.W.B.2
Doudna, J.A.3
-
13
-
-
0035396727
-
Internal ribosome entry sites in eukaryotic mRNA molecules
-
Hellen C.U.T., and Sarnow P. Internal ribosome entry sites in eukaryotic mRNA molecules. Genes Dev. 15 (2001) 1593-1612
-
(2001)
Genes Dev.
, vol.15
, pp. 1593-1612
-
-
Hellen, C.U.T.1
Sarnow, P.2
-
14
-
-
28844476749
-
Alternative mechanisms of initiating translation of mammalian mRNAs
-
Jackson R.J. Alternative mechanisms of initiating translation of mammalian mRNAs. Biochem. Soc. Trans. 33 (2005) 1231-1241
-
(2005)
Biochem. Soc. Trans.
, vol.33
, pp. 1231-1241
-
-
Jackson, R.J.1
-
15
-
-
36849089028
-
Coupled termination-reinitiation events
-
Mathews M.B., Sonenberg N., and Hershey J.W.B. (Eds), Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
-
Jackson R.J., Kaminski A., and Pördy T.A.A. Coupled termination-reinitiation events. In: Mathews M.B., Sonenberg N., and Hershey J.W.B. (Eds). Translation Control in Biology and Medicine (2007), Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY 197-223
-
(2007)
Translation Control in Biology and Medicine
, pp. 197-223
-
-
Jackson, R.J.1
Kaminski, A.2
Pördy, T.A.A.3
-
16
-
-
33646791554
-
Divergent IRES elements in invertebrates
-
Jan E. Divergent IRES elements in invertebrates. Virus Res. 119 (2006) 16-28
-
(2006)
Virus Res.
, vol.119
, pp. 16-28
-
-
Jan, E.1
-
17
-
-
0037073485
-
Factorless ribosome assembly on the internal ribosome entry site of Cricket paralysis virus
-
Jan E., and Sarnow P. Factorless ribosome assembly on the internal ribosome entry site of Cricket paralysis virus. J. Mol. Biol. 324 (2002) 889-902
-
(2002)
J. Mol. Biol.
, vol.324
, pp. 889-902
-
-
Jan, E.1
Sarnow, P.2
-
18
-
-
0346103682
-
Divergent tRNA-like element supports initiation, elongation, and termination of protein biosynthesis
-
Jan E., Kinzy T.G., and Sarnow P. Divergent tRNA-like element supports initiation, elongation, and termination of protein biosynthesis. Proc. Natl. Acad. Sci. USA 100 (2003) 15410-15415
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 15410-15415
-
-
Jan, E.1
Kinzy, T.G.2
Sarnow, P.3
-
19
-
-
0023758546
-
A segment of the 5′ nontranslated region of encephalomyocarditis virus RNA directs internal entry of ribosomes during in vitro translation
-
Jang S.K., Kräusslich H.-G., Nicklin M.J.H., Duke G.M., Palmenberg A.C., and Wimmer E. A segment of the 5′ nontranslated region of encephalomyocarditis virus RNA directs internal entry of ribosomes during in vitro translation. J. Virol. 62 (1988) 2636-2643
-
(1988)
J. Virol.
, vol.62
, pp. 2636-2643
-
-
Jang, S.K.1
Kräusslich, H.-G.2
Nicklin, M.J.H.3
Duke, G.M.4
Palmenberg, A.C.5
Wimmer, E.6
-
20
-
-
0035259873
-
A tertiary structure model of the internal ribosome entry site (IRES) for methionine-independent initiation of translation
-
Kanamori Y., and Nakashima N. A tertiary structure model of the internal ribosome entry site (IRES) for methionine-independent initiation of translation. RNA 7 (2001) 266-274
-
(2001)
RNA
, vol.7
, pp. 266-274
-
-
Kanamori, Y.1
Nakashima, N.2
-
21
-
-
46549086974
-
Viral IRES RNA structures and ribosome interactions
-
Kieft J.S. Viral IRES RNA structures and ribosome interactions. Trends Biochem. Sci. 33 (2008) 274-283
-
(2008)
Trends Biochem. Sci.
, vol.33
, pp. 274-283
-
-
Kieft, J.S.1
-
22
-
-
0033061571
-
Initiation of translation in prokaryotes and eukaryotes
-
Kozak M. Initiation of translation in prokaryotes and eukaryotes. Gene 234 (1999) 187-208
-
(1999)
Gene
, vol.234
, pp. 187-208
-
-
Kozak, M.1
-
23
-
-
0035008872
-
New ways of initiating translation in eukaryotes?
-
Kozak M. New ways of initiating translation in eukaryotes?. Mol. Cell. Biol. 21 (2001) 1899-1907
-
(2001)
Mol. Cell. Biol.
, vol.21
, pp. 1899-1907
-
-
Kozak, M.1
-
24
-
-
34748910614
-
Lessons (not) learned from mistakes about translation
-
Kozak M. Lessons (not) learned from mistakes about translation. Gene 403 (2007) 194-203
-
(2007)
Gene
, vol.403
, pp. 194-203
-
-
Kozak, M.1
-
25
-
-
0018898404
-
Characterization of cricket paralysis virus-induced polypeptides in Drosophila cells
-
Moore N.F., Kearns A., and Pallin J.S.K. Characterization of cricket paralysis virus-induced polypeptides in Drosophila cells. J. Virol. 33 (1980) 1-9
-
(1980)
J. Virol.
, vol.33
, pp. 1-9
-
-
Moore, N.F.1
Kearns, A.2
Pallin, J.S.K.3
-
26
-
-
0038750886
-
Structural elements in the internal ribosome entry site of Plautia stali intestine virus responsible for binding with ribosomes
-
Nishiyama T., Yamamoto H., Shibuya N., Hatakeyama Y., Hachimori A., Uchiumi T., and Nakashima N. Structural elements in the internal ribosome entry site of Plautia stali intestine virus responsible for binding with ribosomes. Nucleic Acids Res. 31 (2003) 2434-2442
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 2434-2442
-
-
Nishiyama, T.1
Yamamoto, H.2
Shibuya, N.3
Hatakeyama, Y.4
Hachimori, A.5
Uchiumi, T.6
Nakashima, N.7
-
27
-
-
7044228006
-
The pathway of HCV IRES-mediated translation initiation
-
Otto G.A., and Puglisi J.D. The pathway of HCV IRES-mediated translation initiation. Cell 119 (2004) 369-380
-
(2004)
Cell
, vol.119
, pp. 369-380
-
-
Otto, G.A.1
Puglisi, J.D.2
-
28
-
-
0023720048
-
Internal initiation of translation of eukaryotic mRNA directed by a sequence derived from poliovirus RNA
-
Pelletier J., and Sonenberg N. Internal initiation of translation of eukaryotic mRNA directed by a sequence derived from poliovirus RNA. Nature 334 (1988) 320-325
-
(1988)
Nature
, vol.334
, pp. 320-325
-
-
Pelletier, J.1
Sonenberg, N.2
-
29
-
-
0037439060
-
Translation elongation after assembly of ribosomes on the Cricket paralysis virus internal ribosomal entry site without initiation factors or initiator tRNA
-
Pestova T.V., and Hellen C.U.T. Translation elongation after assembly of ribosomes on the Cricket paralysis virus internal ribosomal entry site without initiation factors or initiator tRNA. Genes Dev. 17 (2003) 181-186
-
(2003)
Genes Dev.
, vol.17
, pp. 181-186
-
-
Pestova, T.V.1
Hellen, C.U.T.2
-
30
-
-
13944271964
-
Position of the CrPV IRES on the 40S subunit and factor dependence of IRES/80S ribosome assembly
-
Pestova T.V., Lomakin I.B., and Hellen C.U.T. Position of the CrPV IRES on the 40S subunit and factor dependence of IRES/80S ribosome assembly. EMBO Rep. 5 (2004) 906-913
-
(2004)
EMBO Rep.
, vol.5
, pp. 906-913
-
-
Pestova, T.V.1
Lomakin, I.B.2
Hellen, C.U.T.3
-
31
-
-
33846991130
-
The mechanism of translation initiation in eukaryotes
-
Matthews M.B., Sonenberg N., and Hershey J.W.B. (Eds), Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
-
Pestova T.V., Lorsch J.R., and Hellen C.U.T. The mechanism of translation initiation in eukaryotes. In: Matthews M.B., Sonenberg N., and Hershey J.W.B. (Eds). Translation Control in Biology and Medicine (2007), Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY 87-128
-
(2007)
Translation Control in Biology and Medicine
, pp. 87-128
-
-
Pestova, T.V.1
Lorsch, J.R.2
Hellen, C.U.T.3
-
32
-
-
33845335508
-
Structural basis for ribosome recruitment and manipulation by a viral IRES RNA
-
Pfingsten J.S., Costantino D.A., and Kieft J.S. Structural basis for ribosome recruitment and manipulation by a viral IRES RNA. Science 314 (2006) 1450-1454
-
(2006)
Science
, vol.314
, pp. 1450-1454
-
-
Pfingsten, J.S.1
Costantino, D.A.2
Kieft, J.S.3
-
33
-
-
0022423219
-
A new principle of RNA folding based on pseudoknotting
-
Pleij C.W., Rietveld K., and Bosch L. A new principle of RNA folding based on pseudoknotting. Nucleic Acids Res. 13 (1985) 1717-1731
-
(1985)
Nucleic Acids Res.
, vol.13
, pp. 1717-1731
-
-
Pleij, C.W.1
Rietveld, K.2
Bosch, L.3
-
34
-
-
0034652330
-
More surprises in translation: Initiation without the initiator tRNA
-
RajBhandary U.L. More surprises in translation: Initiation without the initiator tRNA. Proc. Natl. Acad. Sci. USA 97 (2000) 1325-1327
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 1325-1327
-
-
RajBhandary, U.L.1
-
35
-
-
0002084108
-
Initiator tRNA and initiation of protein synthesis
-
Söll D., and RajBhandary U.L. (Eds), ASM Press, Washington, DC
-
RajBhandary U.L., and Chow C.M. Initiator tRNA and initiation of protein synthesis. In: Söll D., and RajBhandary U.L. (Eds). tRNA, Structure, Biosynthesis, and Function (1995), ASM Press, Washington, DC 511-528
-
(1995)
tRNA, Structure, Biosynthesis, and Function
, pp. 511-528
-
-
RajBhandary, U.L.1
Chow, C.M.2
-
36
-
-
0032927056
-
Translation initiation at the CUU codon is mediated by the internal ribosome entry site of an insect picorna-like virus in vitro
-
Sasaki J., and Nakashima N. Translation initiation at the CUU codon is mediated by the internal ribosome entry site of an insect picorna-like virus in vitro. J. Virol. 73 (1999) 1219-1226
-
(1999)
J. Virol.
, vol.73
, pp. 1219-1226
-
-
Sasaki, J.1
Nakashima, N.2
-
37
-
-
0034652349
-
Methionine-independent initiation of translation in the capsid protein of an insect RNA virus
-
Sasaki J., and Nakashima N. Methionine-independent initiation of translation in the capsid protein of an insect RNA virus. Proc. Natl. Acad. Sci. USA 97 (2000) 1512-1515
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 1512-1515
-
-
Sasaki, J.1
Nakashima, N.2
-
38
-
-
0032565430
-
An insect picorna-like virus, Plautia stali intestine virus, has genes of capsid proteins in the 3′ part of the genome
-
Sasaki J., Nakashima N., Saito H., and Noda H. An insect picorna-like virus, Plautia stali intestine virus, has genes of capsid proteins in the 3′ part of the genome. Virology 244 (1998) 50-58
-
(1998)
Virology
, vol.244
, pp. 50-58
-
-
Sasaki, J.1
Nakashima, N.2
Saito, H.3
Noda, H.4
-
39
-
-
33845361023
-
Structure of the ribosome-bound cricket paralysis virus IRES RNA
-
Schüler M., Connell S.R., Lescoute A., Giesebrecht K., Dabrowski M., Schroeer B., Mielke T., Penczek P.A., Westhof E., and Spahn C.M. Structure of the ribosome-bound cricket paralysis virus IRES RNA. Nat. Struct. Mol. Biol. 13 (2006) 1092-1096
-
(2006)
Nat. Struct. Mol. Biol.
, vol.13
, pp. 1092-1096
-
-
Schüler, M.1
Connell, S.R.2
Lescoute, A.3
Giesebrecht, K.4
Dabrowski, M.5
Schroeer, B.6
Mielke, T.7
Penczek, P.A.8
Westhof, E.9
Spahn, C.M.10
-
40
-
-
33749354360
-
Structure of the 70S ribosome complexed with mRNA and tRNA
-
Selmer M., Dunham C.W., Murphy IV F.V., Weixlbaumer A., Petry S., Kelley A.C., Weir J.R., and Ramakrishnan V. Structure of the 70S ribosome complexed with mRNA and tRNA. Science 313 (2006) 1935-1942
-
(2006)
Science
, vol.313
, pp. 1935-1942
-
-
Selmer, M.1
Dunham, C.W.2
Murphy IV, F.V.3
Weixlbaumer, A.4
Petry, S.5
Kelley, A.C.6
Weir, J.R.7
Ramakrishnan, V.8
-
41
-
-
4644247805
-
Cryo-EM visualization of a viral internal ribosome entry site bound to human ribosomes, the IRES functions as an RNA-based translation factor
-
Spahn C.M., Jan E., Mulder A., Grassucci R.A., Sarnow P., and Frank J. Cryo-EM visualization of a viral internal ribosome entry site bound to human ribosomes, the IRES functions as an RNA-based translation factor. Cell 118 (2004) 465-475
-
(2004)
Cell
, vol.118
, pp. 465-475
-
-
Spahn, C.M.1
Jan, E.2
Mulder, A.3
Grassucci, R.A.4
Sarnow, P.5
Frank, J.6
-
42
-
-
23844558098
-
A cross-kingdom internal ribosome entry site reveals a simplified mode of internal ribosome entry
-
Terenin I.M., Dmitriev S.E., Andreev D.E., Royall E., Belsham G.J., Roberts L.O., and Shatsky I.N. A cross-kingdom internal ribosome entry site reveals a simplified mode of internal ribosome entry. Mol. Cell. Biol. 25 (2005) 7879-7888
-
(2005)
Mol. Cell. Biol.
, vol.25
, pp. 7879-7888
-
-
Terenin, I.M.1
Dmitriev, S.E.2
Andreev, D.E.3
Royall, E.4
Belsham, G.J.5
Roberts, L.O.6
Shatsky, I.N.7
-
43
-
-
0035818467
-
Internal initiation in Saccharomyces cerevisiae mediated by an initiator tRNA/eIF2 independent ribosome entry site element
-
Thompson S.R., Gulyas K.D., and Sarnow P. Internal initiation in Saccharomyces cerevisiae mediated by an initiator tRNA/eIF2 independent ribosome entry site element. Proc. Natl. Acad. Sci. USA 98 (2001) 12972-12977
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 12972-12977
-
-
Thompson, S.R.1
Gulyas, K.D.2
Sarnow, P.3
-
44
-
-
1242303422
-
Demonstrating internal ribosome entry sites in eukaryotic mRNAs using stringent RNA test procedures
-
van Eden M.E., Byrd M.P., Sherrill K.W., and Lloyd R.E. Demonstrating internal ribosome entry sites in eukaryotic mRNAs using stringent RNA test procedures. RNA 10 (2004) 720-730
-
(2004)
RNA
, vol.10
, pp. 720-730
-
-
van Eden, M.E.1
Byrd, M.P.2
Sherrill, K.W.3
Lloyd, R.E.4
-
45
-
-
0029861143
-
The N-end rule: functions, mysteries, uses
-
Varshavsky A. The N-end rule: functions, mysteries, uses. Proc. Natl. Acad. Sci. USA 93 (1996) 12142-12149
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 12142-12149
-
-
Varshavsky, A.1
-
46
-
-
0034682720
-
Initiation of protein synthesis from the A site of ribosome
-
Wilson J.E., Pestova T.V., Hellen C.U.T., and Sarnow P. Initiation of protein synthesis from the A site of ribosome. Cell 102 (2000) 511-520
-
(2000)
Cell
, vol.102
, pp. 511-520
-
-
Wilson, J.E.1
Pestova, T.V.2
Hellen, C.U.T.3
Sarnow, P.4
-
47
-
-
0033920258
-
Naturally occurring dicistronic cricket paralysis virus RNA is regulated by two internal ribosome entry sites
-
Wilson J.E., Powell M.J., Hoover S.E., and Sarnow P. Naturally occurring dicistronic cricket paralysis virus RNA is regulated by two internal ribosome entry sites. Mol. Cell. Biol. 20 (2000) 4990-4999
-
(2000)
Mol. Cell. Biol.
, vol.20
, pp. 4990-4999
-
-
Wilson, J.E.1
Powell, M.J.2
Hoover, S.E.3
Sarnow, P.4
-
48
-
-
0025113514
-
RNA pseudoknots. Stability and loop size requirements
-
Wyatt J.R., Puglisi J.D., and Tinoco Jr. I. RNA pseudoknots. Stability and loop size requirements. J. Mol. Biol. 214 (1990) 455-470
-
(1990)
J. Mol. Biol.
, vol.214
, pp. 455-470
-
-
Wyatt, J.R.1
Puglisi, J.D.2
Tinoco Jr., I.3
|