메뉴 건너뛰기




Volumn 181, Issue 4, 2009, Pages 1387-1397

High nucleotide divergence in developmental regulatory genes contrasts with the structural elements of olfactory pathways in Caenorhabditis

Author keywords

[No Author keywords available]

Indexed keywords

NUCLEOTIDE;

EID: 67650337477     PISSN: 00166731     EISSN: 00166731     Source Type: Journal    
DOI: 10.1534/genetics.107.082651     Document Type: Article
Times cited : (32)

References (101)
  • 1
    • 27644437576 scopus 로고    scopus 로고
    • Olfaction: Diverse species, conserved principles
    • ACHE, B. W., and J. M. YOUNG, 2005 Olfaction: diverse species, conserved principles. Neuron 48: 417-430.
    • (2005) Neuron , vol.48 , pp. 417-430
    • Ache, B.W.1    Young, J.M.2
  • 3
    • 0033501283 scopus 로고    scopus 로고
    • Natural and experimental associations of Caenorhabditis remanei with Trachelipus rathkii and other terrestrial isopods
    • BAIRD, S. E., 1999 Natural and experimental associations of Caenorhabditis remanei with Trachelipus rathkii and other terrestrial isopods. Nematology 1: 471-475.
    • (1999) Nematology , vol.1 , pp. 471-475
    • Baird, S.E.1
  • 4
    • 2442500522 scopus 로고    scopus 로고
    • Nucleotide Variation in the tinman and bagpipe Homeobox Genes of Drosophila melanogaster
    • DOI 10.1534/genetics.166.4.1845
    • BALAKIREV, E. S., and F. J. AYALA, 2004 Nucleotide variation in the tinman and bagpipe homeobox genes of Drosophila melanogaster. Genetics 166: 1845-1856. (Pubitemid 38621065)
    • (2004) Genetics , vol.166 , Issue.4 , pp. 1845-1856
    • Balakirev, E.S.1    Ayala, F.J.2
  • 5
    • 0027160919 scopus 로고
    • Odorant-selective genes and neurons mediate olfaction in C. elegans
    • BARGMANN, C. I., E. HARTWIEG and H. R. HORVITZ, 1993 Odorant-selective genes and neurons mediate olfaction in C. elegans. Cell 74: 515-527. (Pubitemid 23244617)
    • (1993) Cell , vol.74 , Issue.3 , pp. 515-527
    • Bargmann, C.I.1    Hartwieg, E.2    Horvitz, H.R.3
  • 6
    • 0031900020 scopus 로고    scopus 로고
    • Signal transduction in the Caenorhabditis elegans nervous system
    • BARGMANN, C. I., and J. M. KAPLAN, 1998 Signal transduction in the Caenorhabditis elegans nervous system. Annu. Rev. Neurosci. 21: 279-308.
    • (1998) Annu. Rev. Neurosci. , vol.21 , pp. 279-308
    • Bargmann, C.I.1    Kaplan, J.M.2
  • 7
  • 8
    • 21844462370 scopus 로고    scopus 로고
    • High local genetic diversity and low outcrossing rate in Caenorhabditis elegans natural populations
    • BARRIERE, A., and M. A. FELIX, 2005 High local genetic diversity and low outcrossing rate in Caenorhabditis elegans natural populations. Curr. Biol. 15: 1176-1184.
    • (2005) Curr. Biol. , vol.15 , pp. 1176-1184
    • Barriere, A.1    Felix, M.A.2
  • 9
    • 33746647402 scopus 로고    scopus 로고
    • Chemical sensitivity in Caenorhabditis elegans
    • BERGAMASCO, C., and P. BAZZICALUPO, 2006 Chemical sensitivity in Caenorhabditis elegans. Cell. Mol. Life Sci. 63: 1510-1522.
    • (2006) Cell. Mol. Life Sci. , vol.63 , pp. 1510-1522
    • Bergamasco, C.1    Bazzicalupo, P.2
  • 10
    • 0016063911 scopus 로고
    • The genetics of Caenorhabditis elegans
    • Brenner, S., 1974 The genetics of Caenorhabditis elegans. Genetics 77: 71-94.
    • (1974) Genetics , vol.77 , pp. 71-94
    • Brenner, S.1
  • 11
    • 34250760886 scopus 로고    scopus 로고
    • Small-molecule pheromones that control dauer development in Caenorhabditis elegans
    • BUTCHER, R. A., M. FUJITA, F. C. SCHROEDER and J. CLARDY, 2007 Small-molecule pheromones that control dauer development in Caenorhabditis elegans. Nat. Chem. Biol. 3: 420-422.
    • (2007) Nat. Chem. Biol. , vol.3 , pp. 420-422
    • Butcher, R.A.1    Fujita, M.2    Schroeder, F.C.3    Clardy, J.4
  • 12
    • 0242391986 scopus 로고    scopus 로고
    • Codon adaptation index as a measure of dominating codon bias
    • CARBONE, A., A. ZINOVYEV and F. KEPES, 2003 Codon adaptation index as a measure of dominating codon bias. Bioinformatics 19: 2005-2015.
    • (2003) Bioinformatics , vol.19 , pp. 2005-2015
    • Carbone, A.1    Zinovyev, A.2    Kepes, F.3
  • 14
    • 46149104377 scopus 로고    scopus 로고
    • Evo-devo and an expanding evolutionary synthesis: A genetic theory of morphological evolution
    • CARROLL, S. B., 2008 Evo-devo and an expanding evolutionary synthesis: a genetic theory of morphological evolution. Cell 134: 25-36.
    • (2008) Cell , vol.134 , pp. 25-36
    • Carroll, S.B.1
  • 16
    • 0030273625 scopus 로고    scopus 로고
    • A putative cyclic nucleotide-gated channel is required for sensory development and function in C. elegans
    • COBURN, C. M., and C. I. BARGMANN, 1996 A putative cyclic nucleotide-gated channel is required for sensory development and function in C. elegans. Neuron 17: 695-706.
    • (1996) Neuron , vol.17 , pp. 695-706
    • Coburn, C.M.1    Bargmann, C.I.2
  • 17
    • 0030776196 scopus 로고    scopus 로고
    • OSM-9, a novel protein with structural similarity to channels, is required for olfaction, mechanosensation, and olfactory adaptation in Caenorhabditis elegans
    • COLBERT, H. A., T. L. Smith and C. I. BARGMANN, 1997 OSM-9, a novel protein with structural similarity to channels, is required for olfaction, mechanosensation, and olfactory adaptation in Caenorhabditis elegans. J. Neurosci. 17: 8259-8269.
    • (1997) J. Neurosci. , vol.17 , pp. 8259-8269
    • Colbert, H.A.1    Smith, T.L.2    Bargmann, C.I.3
  • 18
    • 2542491030 scopus 로고    scopus 로고
    • The evolution of molecular genetic pathways and networks
    • DOI 10.1002/bies.20026
    • CORK, J. M., and M. D. PURUGGANAN, 2004 The evolution of molecular genetic pathways and networks. BioEssays 26: 479-484. (Pubitemid 38684963)
    • (2004) BioEssays , vol.26 , Issue.5 , pp. 479-484
    • Cork, J.M.1    Purugganan, M.D.2
  • 19
    • 33644768092 scopus 로고    scopus 로고
    • Nucleotide polymorphism and linkage disequilibrium in wild populations of the partial selfer Caenorhabditis elegans
    • DOI 10.1534/genetics.105.048207
    • CUTTER, A. D., 2006 Nucleotide polymorphism and linkage disequilibrium in wild populations of the partial selfer Caenorhabditis elegans. Genetics 172: 171-184. (Pubitemid 43345481)
    • (2006) Genetics , vol.172 , Issue.1 , pp. 171-184
    • Cutter, A.D.1
  • 20
    • 33750033346 scopus 로고    scopus 로고
    • High nucleotide polymorphism and rapid decay of linkage disequilibrium in wild populations of Caenorhabditis remanei
    • DOI 10.1534/genetics.106.061879
    • CUTTER, A. D., S. E. BAIRD and D. CHARLESWORTH, 2006a High nucleotide polymorphism and rapid decay of linkage disequilibrium in wild populations of Caenorhabditis remanei. Genetics 174: 901-913. (Pubitemid 44656477)
    • (2006) Genetics , vol.174 , Issue.2 , pp. 901-913
    • Cutter, A.D.1    Baird, S.E.2    Charlesworth, D.3
  • 21
    • 33750021975 scopus 로고    scopus 로고
    • Selection intensity on preferred codons correlates with overall codon usage bias in Caenorhabditis remanei
    • CUTTER, A. D., and B. CHARLESWORTH, 2006 Selection intensity on preferred codons correlates with overall codon usage bias in Caenorhabditis remanei. Curr. Biol. 16: 2053-2057.
    • (2006) Curr. Biol. , vol.16 , pp. 2053-2057
    • Cutter, A.D.1    Charlesworth, B.2
  • 22
    • 33747825367 scopus 로고    scopus 로고
    • Patterns of nucleotide polymorphism distinguish temperate and tropical wild isolates of Caenorhabditis briggsae
    • CUTTER, A. D., M. A. FELIX, A. BARRIERE and D. CHARLESWORTH, 2006b Patterns of nucleotide polymorphism distinguish temperate and tropical wild isolates of Caenorhabditis briggsae. Genetics 173: 2021-2031.
    • (2006) Genetics , vol.173 , pp. 2021-2031
    • Cutter, A.D.1    Felix, M.A.2    Barriere, A.3    Charlesworth, D.4
  • 23
    • 33750011953 scopus 로고    scopus 로고
    • The evolution of biased codon and amino acid usage in nematode genomes
    • CUTTER, A. D., J. D. WASMUTH and M. L. BLAXTER, 2006c The evolution of biased codon and amino acid usage in nematode genomes. Mol. Biol. Evol. 23: 2303-2315.
    • (2006) Mol. Biol. Evol. , vol.23 , pp. 2303-2315
    • Cutter, A.D.1    Wasmuth, J.D.2    Blaxter, M.L.3
  • 24
    • 0033824648 scopus 로고    scopus 로고
    • Egl-4 acts through a transforming growth factor-beta/SMAD pathway in Caenorhabditis elegans to regulate multiple neuronal circuits in response to sensory cues
    • DANIELS, S., M. AILION, J. THOMAS and P. SENGUPTA, 2000 egl-4 acts through a transforming growth factor-beta/SMAD pathway in Caenorhabditis elegans to regulate multiple neuronal circuits in response to sensory cues. Genetics 156: 123-141.
    • (2000) Genetics , vol.156 , pp. 123-141
    • Daniels, S.1    Ailion, M.2    Thomas, J.3    Sengupta, P.4
  • 25
    • 0037218032 scopus 로고    scopus 로고
    • Molecular approaches to aggregation behavior and social attachment
    • DE BONO, M., 2003 Molecular approaches to aggregation behavior and social attachment. J. Neurobiol. 54: 78-92.
    • (2003) J. Neurobiol. , vol.54 , pp. 78-92
    • De Bono, M.1
  • 26
    • 0037206880 scopus 로고    scopus 로고
    • Social feeding in Caenorhabditis elegans is induced by neurons that detect aversive stimuli
    • DE BONO, M., D. M. TOBIN, M. W. DAVIS, L. AVERY and C. I. BARGMANN, 2002 Social feeding in Caenorhabditis elegans is induced by neurons that detect aversive stimuli. Nature 419: 899-903.
    • (2002) Nature , vol.419 , pp. 899-903
    • De Bono, M.1    Tobin, D.M.2    Davis, M.W.3    Avery, L.4    Bargmann, C.I.5
  • 27
    • 30044438676 scopus 로고    scopus 로고
    • Olfactory shifts parallel superspecialism for toxic fruit in Drosophila melanogaster sibling, D. sechellia
    • DEKKER, T., I. IBBA, K. P. SIJU, M. C. STENSMYR and B. S. HANSSON, 2006 Olfactory shifts parallel superspecialism for toxic fruit in Drosophila melanogaster sibling, D. sechellia. Curr. Biol. 16: 101-109.
    • (2006) Curr. Biol. , vol.16 , pp. 101-109
    • Dekker, T.1    Ibba, I.2    Siju, K.P.3    Stensmyr, M.C.4    Hansson, B.S.5
  • 28
    • 0032006747 scopus 로고    scopus 로고
    • The evolution of 'bricolage'
    • DUBOULE, D., and A. S. WILKINS, 1998 The evolution of 'bricolage'. Trends Genet. 14: 54-59.
    • (1998) Trends Genet. , vol.14 , pp. 54-59
    • Duboule, D.1    Wilkins, A.S.2
  • 29
    • 0347356449 scopus 로고    scopus 로고
    • Selection on coding regions determined Hox7 genes evolution
    • FARES, M. A., D. BEZEMER, A. MOYA and I. MARIN, 2003 Selection on coding regions determined Hox7 genes evolution. Mol. Biol. Evol. 20: 2104-2112.
    • (2003) Mol. Biol. Evol. , vol.20 , pp. 2104-2112
    • Fares, M.A.1    Bezemer, D.2    Moya, A.3    Marin, I.4
  • 30
    • 0034924997 scopus 로고    scopus 로고
    • Positive and negative selection on the human genome
    • FAY, J. C., G. J. WYCKOFF and C. I. WU, 2001 Positive and negative selection on the human genome. Genetics 158: 1227-1234. (Pubitemid 32667107)
    • (2001) Genetics , vol.158 , Issue.3 , pp. 1227-1234
    • Fay, J.C.1    Wyckoff, G.J.2    Wu, C.-I.3
  • 31
    • 0037148774 scopus 로고    scopus 로고
    • Evolution of a transcriptional repression domain in an insect Hox protein
    • DOI 10.1038/nature717
    • Galant, R., and S. B. Carroll, 2002 Evolution of a transcriptional repression domain in an insect Hox protein. Nature 415: 910-913. (Pubitemid 34174752)
    • (2002) Nature , vol.415 , Issue.6874 , pp. 910-913
    • Galant, R.1    Carroll, S.B.2
  • 32
    • 0036263181 scopus 로고    scopus 로고
    • Levels of DNA polymorphism vary with mating system in the nematode genus Caenorhabditis
    • GRAUSTEIN, A., J. M. GASPAR, J. R. WALTERS and M. F. PALOPOLI, 2002 Levels of DNA polymorphism vary with mating system in the nematode genus Caenorhabditis. Genetics 161: 99-107.
    • (2002) Genetics , vol.161 , pp. 99-107
    • Graustein, A.1    Gaspar, J.M.2    Walters, J.R.3    Palopoli, M.F.4
  • 33
    • 17044384124 scopus 로고    scopus 로고
    • Intraspecific variation in fem-3 and tra-2, two rapidly coevolving nematode sex-determining genes
    • DOI 10.1016/j.gene.2004.12.051
    • HAAG, E. S., and A. D. ACKERMAN, 2005 Intraspecific variation in fem-3 and tra-2, two rapidly coevolving nematode sex-determining genes. Gene 349: 35-42. (Pubitemid 40501885)
    • (2005) Gene , vol.349 , pp. 35-42
    • Haag, E.S.1    Ackerman, A.D.2
  • 34
    • 14644413588 scopus 로고    scopus 로고
    • Sex determination across evolution: Connecting the dots
    • HAAG, E. S., and A. V. DOTY, 2005 Sex determination across evolution: connecting the dots. PLoS Biol. 3: e21.
    • (2005) PLoS Biol. , vol.3
    • Haag, E.S.1    Doty, A.V.2
  • 35
    • 16344381521 scopus 로고    scopus 로고
    • Comparative genomics of centrality and essentiality in three eukaryotic protein-interaction networks
    • HAHN, M. W., and A. D. KERN, 2005 Comparative genomics of centrality and essentiality in three eukaryotic protein-interaction networks. Mol. Biol. Evol. 22: 803-806.
    • (2005) Mol. Biol. Evol. , vol.22 , pp. 803-806
    • Hahn, M.W.1    Kern, A.D.2
  • 36
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • HALL, T. A., 1999 BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp. Ser. 41: 95-98.
    • (1999) Nucleic Acids Symp. Ser. , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 37
    • 0031729188 scopus 로고    scopus 로고
    • Preponderance of slightly deleterious polymorphism in mitochondrial DNA: Nonsynonymous/ synonymous rate ratio is much higher within species than between species
    • HASEGAWA, M., Y. CAO and Z. YANG, 1998 Preponderance of slightly deleterious polymorphism in mitochondrial DNA: nonsynonymous/ synonymous rate ratio is much higher within species than between species. Mol. Biol. Evol. 15: 1499-1505.
    • (1998) Mol. Biol. Evol. , vol.15 , pp. 1499-1505
    • Hasegawa, M.1    Cao, Y.2    Yang, Z.3
  • 38
    • 34547137683 scopus 로고    scopus 로고
    • Comparison of C. elegans and C. briggsae genome sequences reveals extensive conservation of chromosome organization and synteny
    • HILLIER, L. W., R. D. MILLER, S. E. BAIRD, A. CHINWALLA, L. A. FULTON et al., 2007 Comparison of C. elegans and C. briggsae genome sequences reveals extensive conservation of chromosome organization and synteny. PLoS Biol. 5: e167.
    • (2007) PLoS Biol. , vol.5
    • Hillier, L.W.1    Miller, R.D.2    Baird, S.E.3    Chinwalla, A.4    Fulton, L.A.5
  • 39
    • 10344224528 scopus 로고    scopus 로고
    • Adjusting for selection on synonymous sites in estimates of evolutionary distance
    • HIRSH, A. E., H. B. FRASER and D. P. WALL, 2005 Adjusting for selection on synonymous sites in estimates of evolutionary distance. Mol. Biol. Evol. 22: 174-177.
    • (2005) Mol. Biol. Evol. , vol.22 , pp. 174-177
    • Hirsh, A.E.1    Fraser, H.B.2    Wall, D.P.3
  • 40
    • 34247855863 scopus 로고    scopus 로고
    • The locus of evolution: Evo devo and the genetics of adaptation
    • HOEKSTRA, H. E., and J. A. COYNE, 2007 The locus of evolution: evo devo and the genetics of adaptation. Evol. Int. J. Org. Evol. 61: 995-1016.
    • (2007) Evol. Int. J. Org. Evol. , vol.61 , pp. 995-1016
    • Hoekstra, H.E.1    Coyne, J.A.2
  • 41
    • 0017771466 scopus 로고
    • Evolution and tinkering
    • JACOB, F., 1977 Evolution and tinkering. Science 196: 1161-1166.
    • (1977) Science , vol.196 , pp. 1161-1166
    • Jacob, F.1
  • 42
    • 0032904017 scopus 로고    scopus 로고
    • The complete family of genes encoding G proteins of Caenorhabditis elegans
    • JANSEN, G., K. L. THIJSSEN, P. WERNER, M. VAN DERHORST, E. HAZENDONK et al., 1999 The complete family of genes encoding G proteins of Caenorhabditis elegans. Nat. Genet. 21: 414-419.
    • (1999) Nat. Genet. , vol.21 , pp. 414-419
    • Jansen, G.1    Thijssen, K.L.2    Werner, P.3    Van Derhorst, M.4    Hazendonk, E.5
  • 43
    • 13444251248 scopus 로고    scopus 로고
    • Chemical structure and biological activity of the Caenorhabditis elegans dauer-inducing pheromone
    • DOI 10.1038/nature03201
    • JEONG, P. Y., M. JUNG, Y. H. YIM, H. KIM, M. PARK et al., 2005 Chemical structure and biological activity of the Caenorhabditis elegans dauer-inducing pheromone. Nature 433: 541-545. (Pubitemid 40204313)
    • (2005) Nature , vol.433 , Issue.7025 , pp. 541-545
    • Jeong, P.-Y.1    Jung, M.2    Yim, Y.-H.3    Kim, H.4    Park, M.5    Hong, E.6    Lee, W.7    Kim, Y.H.8    Kim, K.9    Paik, Y.-K.10
  • 44
    • 0041474709 scopus 로고    scopus 로고
    • Excess non-synonymous substitutions suggest that positive selection episodes occurred during the evolution of DNA-binding domains in the Arabidopsis R2R3-MYB gene family
    • JIA, L., M. T. CLEGG and T. JIANG, 2003 Excess non-synonymous substitutions suggest that positive selection episodes occurred during the evolution of DNA-binding domains in the Arabidopsis R2R3-MYB gene family. Plant Mol. Biol. 52: 627-642.
    • (2003) Plant Mol. Biol. , vol.52 , pp. 627-642
    • Jia, L.1    Clegg, M.T.2    Jiang, T.3
  • 45
    • 1342329848 scopus 로고    scopus 로고
    • Evolutionary dynamics of the DNA-binding domains in putative R2R3-MYB genes identified from rice subspecies indica and japonica genomes
    • JIA, L., M. T. CLEGG and T. JIANG, 2004 Evolutionary dynamics of the DNA-binding domains in putative R2R3-MYB genes identified from rice subspecies indica and japonica genomes. Plant Physiol. 134: 575-585.
    • (2004) Plant Physiol. , vol.134 , pp. 575-585
    • Jia, L.1    Clegg, M.T.2    Jiang, T.3
  • 46
    • 0038752086 scopus 로고    scopus 로고
    • Molecular evolution and quantitative variation for chemosensory behaviour in the nematode genus Caenorhabditis
    • JOVELIN, R., B. C. AJIE and P. C. PHILLIPS, 2003 Molecular evolution and quantitative variation for chemosensory behaviour in the nematode genus Caenorhabditis. Mol. Ecol. 12: 1325-1337.
    • (2003) Mol. Ecol. , vol.12 , pp. 1325-1337
    • Jovelin, R.1    Ajie, B.C.2    Phillips, P.C.3
  • 47
    • 23744479098 scopus 로고    scopus 로고
    • Functional constraint and divergence in the G protein family in Caenorhabditis elegans and Caenorhabditis briggsae
    • JOVELIN, R., and P. C. PHILLIPS, 2005 Functional constraint and divergence in the G protein family in Caenorhabditis elegans and Caenorhabditis briggsae. Mol. Genet. Genomics 273: 299-310.
    • (2005) Mol. Genet. Genomics , vol.273 , pp. 299-310
    • Jovelin, R.1    Phillips, P.C.2
  • 48
    • 0016669094 scopus 로고
    • Evolution at two levels in humans and chimpanzees
    • KING, M. C., and A. C. WILSON, 1975 Evolution at two levels in humans and chimpanzees. Science 188: 107-116.
    • (1975) Science , vol.188 , pp. 107-116
    • King, M.C.1    Wilson, A.C.2
  • 49
    • 2942669900 scopus 로고    scopus 로고
    • Caenorhabditis phylogeny predicts convergence of hermaphroditism and extensive intron loss
    • KIONTKE, K., N. P. GAVIN, Y. RAYNES, C. ROEHRIG, F. PIANO et al., 2004 Caenorhabditis phylogeny predicts convergence of hermaphroditism and extensive intron loss. Proc. Natl. Acad. Sci. USA 101: 9003-9008.
    • (2004) Proc. Natl. Acad. Sci. USA , vol.101 , pp. 9003-9008
    • Kiontke, K.1    Gavin, N.P.2    Raynes, Y.3    Roehrig, C.4    Piano, F.5
  • 50
    • 0030273005 scopus 로고    scopus 로고
    • Mutations in a cyclic nucleotide-gated channel lead to abnormal thermosensation and chemosensation in C. elegans
    • KOMATSU, H., I. MORI, J. S. RHEE, N. AKAIKE and Y. OHSHIMA, 1996 Mutations in a cyclic nucleotide-gated channel lead to abnormal thermosensation and chemosensation in C. elegans. Neuron 17: 707-718.
    • (1996) Neuron , vol.17 , pp. 707-718
    • Komatsu, H.1    Mori, I.2    Rhee, J.S.3    Akaike, N.4    Ohshima, Y.5
  • 51
    • 0033697452 scopus 로고    scopus 로고
    • Olfaction and odor discrimination are mediated by the C. elegans guanylyl cyclase ODR-1
    • L'ETOILE, N. D., and C. I. BARGMANN, 2000 Olfaction and odor discrimination are mediated by the C. elegans guanylyl cyclase ODR-1. Neuron 25: 575-586.
    • (2000) Neuron , vol.25 , pp. 575-586
    • L'Etoile, N.D.1    Bargmann, C.I.2
  • 52
    • 0141989892 scopus 로고    scopus 로고
    • Otx/otd homeobox genes specify distinct sensory neuron identities in C. elegans
    • LANJUIN, A., M. K. VANHOVEN, C. I. BARGMANN, J. K. THOMPSON and P. Sengupta, 2003 Otx/otd homeobox genes specify distinct sensory neuron identities in C. elegans. Dev. Cell 5: 621-633.
    • (2003) Dev. Cell , vol.5 , pp. 621-633
    • Lanjuin, A.1    Vanhoven, M.K.2    Bargmann, C.I.3    Thompson, J.K.4    Sengupta, P.5
  • 53
    • 4644301976 scopus 로고    scopus 로고
    • A network of stimulatory and inhibitory Galpha-subunits regulates olfaction in Caenorhabditis elegans
    • LANS, H., S. RADEMAKERS and G. JANSEN, 2004 A network of stimulatory and inhibitory Galpha-subunits regulates olfaction in Caenorhabditis elegans. Genetics 167: 1677-1687.
    • (2004) Genetics , vol.167 , pp. 1677-1687
    • Lans, H.1    Rademakers, S.2    Jansen, G.3
  • 54
    • 0038075569 scopus 로고    scopus 로고
    • Patterns of nucleotide variation in homoeologous regulatory genes in the allotetraploid Hawaiian silversword alliance (Asteraceae)
    • LAWTON-RAUH, A., R. H. ROBICHAUX and M. D. PURUGGANAN, 2003 Patterns of nucleotide variation in homoeologous regulatory genes in the allotetraploid Hawaiian silversword alliance (Asteraceae). Mol. Ecol. 12: 1301-1313.
    • (2003) Mol. Ecol. , vol.12 , pp. 1301-1313
    • Lawton-Rauh, A.1    Robichaux, R.H.2    Purugganan, M.D.3
  • 56
    • 51549097146 scopus 로고    scopus 로고
    • Resurrecting the role of transcription factor change in developmental evolution
    • LYNCH, V. J., and G. P. WAGNER, 2008 Resurrecting the role of transcription factor change in developmental evolution. Evolution 62: 2131-2154.
    • (2008) Evolution , vol.62 , pp. 2131-2154
    • Lynch, V.J.1    Wagner, G.P.2
  • 57
    • 0345255239 scopus 로고    scopus 로고
    • Adaptive evolution in the Arabidopsis MADS-box gene family inferred from its complete resolved phylogeny
    • MARTINEZ-CASTILLA, L. P., and E. R. ALVAREZ-BUYLLA, 2003 Adaptive evolution in the Arabidopsis MADS-box gene family inferred from its complete resolved phylogeny. Proc. Natl. Acad. Sci. USA 100: 13407-13412.
    • (2003) Proc. Natl. Acad. Sci. USA , vol.100 , pp. 13407-13412
    • Martinez-Castilla, L.P.1    Alvarez-Buylla, E.R.2
  • 58
    • 0026428610 scopus 로고
    • Adaptive protein evolution at the Adh locus in Drosophila
    • MCDONALD, J. H., and M. KREITMAN, 1991 Adaptive protein evolution at the Adh locus in Drosophila. Nature 351: 652-654.
    • (1991) Nature , vol.351 , pp. 652-654
    • McDonald, J.H.1    Kreitman, M.2
  • 59
    • 10344222111 scopus 로고    scopus 로고
    • Molecular population genetics of redundant floral-regulatory genes in Arabidopsis thaliana
    • MOORE, R. C., S. R. GRANT and M. D. PURUGGANAN, 2005 Molecular population genetics of redundant floral-regulatory genes in Arabidopsis thaliana. Mol. Biol. Evol. 22: 91-103.
    • (2005) Mol. Biol. Evol. , vol.22 , pp. 91-103
    • Moore, R.C.1    Grant, S.R.2    Purugganan, M.D.3
  • 60
    • 0030034357 scopus 로고    scopus 로고
    • Intraspecific nuclear DNA variation in Drosophila
    • MORIYAMA, E. N., and J. R. POWELL, 1996 Intraspecific nuclear DNA variation in Drosophila. Mol. Biol. Evol. 13: 261-277.
    • (1996) Mol. Biol. Evol. , vol.13 , pp. 261-277
    • Moriyama, E.N.1    Powell, J.R.2
  • 61
    • 14644429103 scopus 로고    scopus 로고
    • Fog-2 and the evolution of self-fertile hermaphroditism in Caenorhabditis
    • NAYAK, S., J. GOREE and T. SCHEDL, 2005 fog-2 and the evolution of self-fertile hermaphroditism in Caenorhabditis. PLoS Biol. 3: e6.
    • (2005) PLoS Biol. , vol.3
    • Nayak, S.1    Goree, J.2    Schedl, T.3
  • 63
    • 0033962299 scopus 로고    scopus 로고
    • Linkage disequilibrium, gene trees and selfing: An ancestral recombination graph with partial self-fertilization
    • NORDBORG, M., 2000 Linkage disequilibrium, gene trees and selfing: an ancestral recombination graph with partial self-fertilization. Genetics 154: 923-929.
    • (2000) Genetics , vol.154 , pp. 923-929
    • Nordborg, M.1
  • 64
    • 0036240921 scopus 로고    scopus 로고
    • Contrasting evolutionary forces in the Arabidopsis thaliana floral developmental pathway
    • OLSEN, K. M., A. WOMACK, A. R. GARRETT, J. I. SUDDITH and M. D. PURUGGANAN, 2002 Contrasting evolutionary forces in the Arabidopsis thaliana floral developmental pathway. Genetics 160: 1641-1650.
    • (2002) Genetics , vol.160 , pp. 1641-1650
    • Olsen, K.M.1    Womack, A.2    Garrett, A.R.3    Suddith, J.I.4    Purugganan, M.D.5
  • 66
    • 33746265276 scopus 로고    scopus 로고
    • One perfect worm
    • PHILLIPS, P. C., 2006 One perfect worm. Trends Genet. 22: 405-407.
    • (2006) Trends Genet. , vol.22 , pp. 405-407
    • Phillips, P.C.1
  • 67
    • 0023427397 scopus 로고
    • On the theory of partially inbreeding finite populations. I. Partial selfing
    • POLLAK, E., 1987 On the theory of partially inbreeding finite populations. I. Partial selfing. Genetics 117: 353-360.
    • (1987) Genetics , vol.117 , pp. 353-360
    • Pollak, E.1
  • 68
    • 0032999582 scopus 로고    scopus 로고
    • Patterns of evolutionary rate variation among genes of the anthocyanin biosynthetic pathway
    • RAUSHER, M. D., R. E. MILLER and P. TIFFIN, 1999 Patterns of evolutionary rate variation among genes of the anthocyanin biosynthetic pathway. Mol. Biol. Evol. 16: 266-274.
    • (1999) Mol. Biol. Evol. , vol.16 , pp. 266-274
    • Rausher, M.D.1    Miller, R.E.2    Tiffin, P.3
  • 69
    • 0001104583 scopus 로고    scopus 로고
    • Genetic and environmental regulation of dauer larva development
    • edited by D. Riddle, T. Blumenthal, B. Meyer and J. Priess. Cold Spring Harbor Laboratory Press, Plainview, NY
    • RIDDLE, D., and P. ALBERT, 1997 Genetic and environmental regulation of dauer larva development, pp. 739-768 in C. elegans II, edited by D. Riddle, T. Blumenthal, B. Meyer and J. Priess. Cold Spring Harbor Laboratory Press, Plainview, NY.
    • (1997) C. Elegans II , pp. 739-768
    • Riddle, D.1    Albert, P.2
  • 70
    • 0038075568 scopus 로고    scopus 로고
    • Contrasting selection pressures on components of the Ras-mediated signal transduction pathway in Drosophila
    • RILEY, R. M., W. JIN and G. GIBSON, 2003 Contrasting selection pressures on components of the Ras-mediated signal transduction pathway in Drosophila. Mol. Ecol. 12: 1315-1323.
    • (2003) Mol. Ecol. , vol.12 , pp. 1315-1323
    • Riley, R.M.1    Jin, W.2    Gibson, G.3
  • 71
    • 0031934849 scopus 로고    scopus 로고
    • The G alpha protein ODR-3 mediates olfactory and nociceptive function and controls cilium morphogenesis in C. elegans olfactory neurons
    • ROAYAIE, K., J. G. CRUMP, A. SAGASTI and C. I. BARGMANN, 1998 The G alpha protein ODR-3 mediates olfactory and nociceptive function and controls cilium morphogenesis in C. elegans olfactory neurons. Neuron 20: 55-67.
    • (1998) Neuron , vol.20 , pp. 55-67
    • Roayaie, K.1    Crump, J.G.2    Sagasti, A.3    Bargmann, C.I.4
  • 72
    • 0031804088 scopus 로고    scopus 로고
    • Two large families of chemoreceptor genes in the nematodes Caenorhabditis elegans and Caenorhabditis briggsae reveal extensive gene duplication, diversification, movement, and intron loss
    • ROBERTSON, H. M., 1998 Two large families of chemoreceptor genes in the nematodes Caenorhabditis elegans and Caenorhabditis briggsae reveal extensive gene duplication, diversification, movement, and intron loss. Genome Res. 8: 449-463.
    • (1998) Genome Res. , vol.8 , pp. 449-463
    • Robertson, H.M.1
  • 73
    • 0034049664 scopus 로고    scopus 로고
    • The large srh family of chemoreceptor genes in Caenorhabditis nematodes reveals processes of genome evolution involving large duplications and deletions and intron gains and losses
    • ROBERTSON, H. M., 2000 The large srh family of chemoreceptor genes in Caenorhabditis nematodes reveals processes of genome evolution involving large duplications and deletions and intron gains and losses. Genome Res. 10: 192-203.
    • (2000) Genome Res. , vol.10 , pp. 192-203
    • Robertson, H.M.1
  • 74
    • 0035111008 scopus 로고    scopus 로고
    • Updating the str and srj (stl) families of chemoreceptors in Caenorhabditis nematodes reveals frequent gene movement within and between chromosomes
    • ROBERTSON, H. M., 2001 Updating the str and srj (stl) families of chemoreceptors in Caenorhabditis nematodes reveals frequent gene movement within and between chromosomes. Chem. Senses 26: 151-159.
    • (2001) Chem. Senses , vol.26 , pp. 151-159
    • Robertson, H.M.1
  • 75
    • 0037148839 scopus 로고    scopus 로고
    • Hox protein mutation and macroevolution of the insect body plan
    • RONSHAUGEN, M., N. MCGINNIS and W. MCGINNIS, 2002 Hox protein mutation and macroevolution of the insect body plan. Nature 415: 914-917.
    • (2002) Nature , vol.415 , pp. 914-917
    • Ronshaugen, M.1    McGinnis, N.2    McGinnis, W.3
  • 76
    • 0347513220 scopus 로고    scopus 로고
    • DnaSP, DNA polymorphism analyses by the coalescent and other methods
    • ROZAS, J., J. C. SANCHEZ-DELBARRIO, X. MESSEGUER and R. ROZAS, 2003 DnaSP, DNA polymorphism analyses by the coalescent and other methods. Bioinformatics 19: 2496-2497.
    • (2003) Bioinformatics , vol.19 , pp. 2496-2497
    • Rozas, J.1    Sanchez-Delbarrio, J.C.2    Messeguer, X.3    Rozas, R.4
  • 78
    • 0033565556 scopus 로고    scopus 로고
    • Alternative olfactory neuron fates are specified by the LIM homeobox gene lim-4
    • SAGASTI, A., O. HOBERT, E. R. TROEMEL, G. RUVKUN and C. I. BARGMANN, 1999 Alternative olfactory neuron fates are specified by the LIM homeobox gene lim-4. Genes Dev. 13: 1794-1806.
    • (1999) Genes Dev. , vol.13 , pp. 1794-1806
    • Sagasti, A.1    Hobert, O.2    Troemel, E.R.3    Ruvkun, G.4    Bargmann, C.I.5
  • 79
    • 0028589124 scopus 로고
    • The C. elegans gene odr-7 encodes an olfactory-specific member of the nuclear receptor superfamily
    • SENGUPTA, P., H. A. COLBERT and C. I. BARGMANN, 1994 The C. elegans gene odr-7 encodes an olfactory-specific member of the nuclear receptor superfamily. Cell 79: 971-980.
    • (1994) Cell , vol.79 , pp. 971-980
    • Sengupta, P.1    Colbert, H.A.2    Bargmann, C.I.3
  • 80
    • 0029887597 scopus 로고    scopus 로고
    • Odr-10 encodes a seven transmembrane domain olfactory receptor required for responses to the odorant diacetyl
    • SENGUPTA, P., J. H. CHOU and C. I. BARGMANN, 1996 odr-10 encodes a seven transmembrane domain olfactory receptor required for responses to the odorant diacetyl. Cell 84: 899-909.
    • (1996) Cell , vol.84 , pp. 899-909
    • Sengupta, P.1    Chou, J.H.2    Bargmann, C.I.3
  • 81
    • 0023650543 scopus 로고
    • The codon adaptation index: A measure of directional synonymous codon usage bias, and its potential applications
    • SHARP, P. M., and W. H. LI, 1987 The codon adaptation index: a measure of directional synonymous codon usage bias, and its potential applications. Nucleic Acids Res. 15: 1281-1295.
    • (1987) Nucleic Acids Res. , vol.15 , pp. 1281-1295
    • Sharp, P.M.1    Li, W.H.2
  • 82
    • 0037274641 scopus 로고    scopus 로고
    • Population genetics of Caenorhabditis elegans: The paradox of low polymorphism in a widespread species
    • SIVASUNDAR, A., and J. HEY, 2003 Population genetics of Caenorhabditis elegans: the paradox of low polymorphism in a widespread species. Genetics 163: 147-157.
    • (2003) Genetics , vol.163 , pp. 147-157
    • Sivasundar, A.1    Hey, J.2
  • 83
    • 4243088097 scopus 로고    scopus 로고
    • The genome sequence of Caenorhabditis briggsae: A platform for comparative genomics
    • STEIN, L., Z. BAO, D. BLASIAR, T. BLUMENTHAL, M. BRENT et al., 2003 The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics. PLoS Biol. 1: 166-192.
    • (2003) PLoS Biol. , vol.1 , pp. 166-192
    • Stein, L.1    Bao, Z.2    Blasiar, D.3    Blumenthal, T.4    Brent, M.5
  • 84
    • 0344441392 scopus 로고    scopus 로고
    • Evolution of the olfactory code in the Drosophila melanogaster subgroup
    • STENSMYR, M. C., T. DEKKER and B. S. HANSSON, 2003 Evolution of the olfactory code in the Drosophila melanogaster subgroup. Proc. R. Soc. Lond. Ser. B 270: 2333-2340.
    • (2003) Proc. R. Soc. Lond. Ser. B , vol.270 , pp. 2333-2340
    • Stensmyr, M.C.1    Dekker, T.2    Hansson, B.S.3
  • 85
    • 51249106485 scopus 로고    scopus 로고
    • The loci of evolution: How predictable is genetic evolution?
    • STERN, D. L., and V. ORGOGOZO, 2008 The loci of evolution: How predictable is genetic evolution? Evolution 62: 2155-2177.
    • (2008) Evolution , vol.62 , pp. 2155-2177
    • Stern, D.L.1    Orgogozo, V.2
  • 86
    • 18844457074 scopus 로고    scopus 로고
    • High genetic diversity in the chemoreceptor superfamily of Caenorhabditis elegans
    • DOI 10.1534/genetics.104.035329
    • STEWART, M. K., N. L. CLARK, G. MERRIHEW, E. M. GALLOWAY and J. H. THOMAS, 2005 High genetic diversity in the chemoreceptor superfamily of Caenorhabditis elegans. Genetics 169: 1985-1996. (Pubitemid 40695613)
    • (2005) Genetics , vol.169 , Issue.4 , pp. 1985-1996
    • Stewart, M.K.1    Clark, N.L.2    Merrihew, G.3    Galloway, E.M.4    Thomas, J.H.5
  • 87
    • 0031436427 scopus 로고    scopus 로고
    • Rapid evolution of a homeodomain: Evidence for positive selection
    • SUTTON, K. A., and M. F. WILKINSON, 1997 Rapid evolution of a homeodomain: evidence for positive selection. J. Mol. Evol. 45: 579-588.
    • (1997) J. Mol. Evol. , vol.45 , pp. 579-588
    • Sutton, K.A.1    Wilkinson, M.F.2
  • 89
    • 0024313579 scopus 로고
    • Statistical method for testing the neutral mutation hypothesis by DNA polymorphism
    • Tajima, F., 1989 Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123: 585-595.
    • (1989) Genetics , vol.123 , pp. 585-595
    • Tajima, F.1
  • 90
    • 15444369262 scopus 로고    scopus 로고
    • Adaptive evolution in the SRZ chemoreceptor families of Caenorhabditis elegans and Caenorhabditis briggsae
    • THOMAS, J. H., J. L. KELLEY, H. M. ROBERTSON, K. LY and W. J. SWANSON, 2005 Adaptive evolution in the SRZ chemoreceptor families of Caenorhabditis elegans and Caenorhabditis briggsae. Proc. Natl. Acad. Sci. USA 102: 4476-4481.
    • (2005) Proc. Natl. Acad. Sci. USA , vol.102 , pp. 4476-4481
    • Thomas, J.H.1    Kelley, J.L.2    Robertson, H.M.3    Ly, K.4    Swanson, W.J.5
  • 91
    • 0037130468 scopus 로고    scopus 로고
    • Combinatorial expression of TRPV channel proteins defines their sensory functions and subcellular localization in C. elegans neurons
    • TOBIN, D., D. MADSEN, A. KAHN-KIRBY, E. PECKOL, G. MOULDER et al., 2002 Combinatorial expression of TRPV channel proteins defines their sensory functions and subcellular localization in C. elegans neurons. Neuron 35: 307-318.
    • (2002) Neuron , vol.35 , pp. 307-318
    • Tobin, D.1    Madsen, D.2    Kahn-Kirby, A.3    Peckol, E.4    Moulder, G.5
  • 92
    • 34250761279 scopus 로고    scopus 로고
    • Evo-devo and the evolution of social behavior
    • TOTH, A. L., and G. E. ROBINSON, 2007 Evo-devo and the evolution of social behavior. Trends Genet. 23: 334-341.
    • (2007) Trends Genet. , vol.23 , pp. 334-341
    • Toth, A.L.1    Robinson, G.E.2
  • 93
    • 0028825369 scopus 로고
    • Divergent seven transmembrane receptors are candidate chemosensory receptors in C. elegans
    • TROEMEL, E. R., J. H. CHOU, N. D. DWYER, H. A. COLBERT and C. I. Bargmann, 1995 Divergent seven transmembrane receptors are candidate chemosensory receptors in C. elegans. Cell 83: 207-218.
    • (1995) Cell , vol.83 , pp. 207-218
    • Troemel, E.R.1    Chou, J.H.2    Dwyer, N.D.3    Colbert, H.A.4    Bargmann, C.I.5
  • 94
    • 0030669834 scopus 로고    scopus 로고
    • Reprogramming chemotaxis responses: Sensory neurons define olfactory preferences in C. elegans
    • TROEMEL, E. R., B. E. KIMMEL and C. I. BARGMANN, 1997 Reprogramming chemotaxis responses: sensory neurons define olfactory preferences in C. elegans. Cell 91: 161-169.
    • (1997) Cell , vol.91 , pp. 161-169
    • Troemel, E.R.1    Kimmel, B.E.2    Bargmann, C.I.3
  • 95
    • 45349091096 scopus 로고    scopus 로고
    • The gene regulatory logic of transcription factor evolution
    • WAGNER, G. P., and V. J. LYNCH, 2008 The gene regulatory logic of transcription factor evolution. Trends Ecol. Evol. 23: 377-385.
    • (2008) Trends Ecol. Evol. , vol.23 , pp. 377-385
    • Wagner, G.P.1    Lynch, V.J.2
  • 96
    • 0016491430 scopus 로고
    • On the number of segregating sites in genetical models without recombination
    • WATTERSON, G. A., 1975 On the number of segregating sites in genetical models without recombination. Theor. Popul. Biol. 7: 256-276.
    • (1975) Theor. Popul. Biol. , vol.7 , pp. 256-276
    • Watterson, G.A.1
  • 97
    • 24344453727 scopus 로고    scopus 로고
    • Recasting developmental evolution in terms of genetic pathway and network evolution... and the implications for comparative biology
    • WILKINS, A. S., 2005 Recasting developmental evolution in terms of genetic pathway and network evolution. . . and the implications for comparative biology. Brain Res. Bull. 66: 495-509.
    • (2005) Brain Res. Bull. , vol.66 , pp. 495-509
    • Wilkins, A.S.1
  • 98
    • 29644441248 scopus 로고
    • Extraction of high molecular weight DNA from molluscs
    • DOI 10.1016/0168-9525(93)90102-N
    • WINNEPENNINCKX, B., T. BACKELJAU and R. DE WACHTER, 1993 Extraction of high molecular weight DNA from molluscs. Trends Genet. 9: 407. (Pubitemid 23361335)
    • (1993) Trends in Genetics , vol.9 , Issue.12 , pp. 407
  • 99
    • 22144453213 scopus 로고    scopus 로고
    • Predicted highly expressed genes in the genomes of Streptomyces coelicolor and Streptomyces avermitilis and the implications for their metabolism
    • WU, G., D. E. CULLEY and W. ZHANG, 2005 Predicted highly expressed genes in the genomes of Streptomyces coelicolor and Streptomyces avermitilis and the implications for their metabolism. Microbiology 151: 2175-2187.
    • (2005) Microbiology , vol.151 , pp. 2175-2187
    • Wu, G.1    Culley, D.E.2    Zhang, W.3
  • 100
    • 0030683599 scopus 로고    scopus 로고
    • PAML: A program package for phylogenetic analysis by maximum likelihood
    • YANG, Z., 1997 PAML: a program package for phylogenetic analysis by maximum likelihood. Comput. Appl. Biosci. 13: 555-556.
    • (1997) Comput. Appl. Biosci. , vol.13 , pp. 555-556
    • Yang, Z.1
  • 101
    • 0031029724 scopus 로고    scopus 로고
    • Two neuronal G proteins are involved in chemosensation of the Caenorhabditis elegans Dauer-inducing pheromone
    • ZWAAL, R. R., J. E. MENDEL, P. W. STERNBERG and R. H. PLASTERK, 1997 Two neuronal G proteins are involved in chemosensation of the Caenorhabditis elegans Dauer-inducing pheromone. Genetics 145: 715-727.
    • (1997) Genetics , vol.145 , pp. 715-727
    • Zwaal, R.R.1    Mendel, J.E.2    Sternberg, P.W.3    Plasterk, R.H.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.