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Volumn 26, Issue 5, 2004, Pages 479-484

The evolution of molecular genetic pathways and networks

Author keywords

[No Author keywords available]

Indexed keywords

ARABIDOPSIS; GENE TARGETING; MOLECULAR DYNAMICS; MOLECULAR EVOLUTION; MOLECULAR GENETICS; NONHUMAN; PHENOTYPE; PLANT GENETICS; REVIEW;

EID: 2542491030     PISSN: 02659247     EISSN: None     Source Type: Journal    
DOI: 10.1002/bies.20026     Document Type: Review
Times cited : (106)

References (52)
  • 1
    • 2542490739 scopus 로고
    • Metabolic pathways chart: An all-time bestseller
    • Dixon B. 1988. Metabolic pathways chart: an all-time bestseller. The Scientist 2:23.
    • (1988) The Scientist , vol.2 , pp. 23
    • Dixon, B.1
  • 3
    • 0036848847 scopus 로고    scopus 로고
    • Complex networks: Two ways to be robust?
    • Melian CJ, Bascompte J. 2002. Complex networks: two ways to be robust? Ecol Lett 5:705-708.
    • (2002) Ecol Lett , vol.5 , pp. 705-708
    • Melian, C.J.1    Bascompte, J.2
  • 4
    • 0035404380 scopus 로고    scopus 로고
    • Functional genomics and the study of development, variation and evolution
    • White KP. 2001. Functional genomics and the study of development, variation and evolution. Nat Rev Genet 2:528-537.
    • (2001) Nat Rev Genet , vol.2 , pp. 528-537
    • White, K.P.1
  • 5
    • 0036899286 scopus 로고    scopus 로고
    • From patterns to pathways: Gene expression data analysis comes of age
    • Slonim DK. 2002. From patterns to pathways: gene expression data analysis comes of age. Nat Genet 32:502-508.
    • (2002) Nat Genet , vol.32 , pp. 502-508
    • Slonim, D.K.1
  • 6
    • 0030669030 scopus 로고    scopus 로고
    • Exploring the metabolic and genetic control of gene expression on a genomic scale
    • DeRisi JL, Iyer VR, Brown PO. 1997. Exploring the metabolic and genetic control of gene expression on a genomic scale. Science 278: 680-686.
    • (1997) Science , vol.278 , pp. 680-686
    • DeRisi, J.L.1    Iyer, V.R.2    Brown, P.O.3
  • 8
    • 0033531783 scopus 로고    scopus 로고
    • Population and quantitative genetics of regulatory networks
    • Frank SA. 1999. Population and quantitative genetics of regulatory networks. J Theor Biol 197:281-294.
    • (1999) J Theor Biol , vol.197 , pp. 281-294
    • Frank, S.A.1
  • 9
    • 0036240921 scopus 로고    scopus 로고
    • Contrasting evolutionary forces in the Arabidopsis thaliana floral developmental pathway
    • Olsen KM, Womack A, Garrett AR, Suddith JI, Purugganan MD. 2002. Contrasting evolutionary forces in the Arabidopsis thaliana floral developmental pathway. Genetics 161:1641-1650.
    • (2002) Genetics , vol.161 , pp. 1641-1650
    • Olsen, K.M.1    Womack, A.2    Garrett, A.R.3    Suddith, J.I.4    Purugganan, M.D.5
  • 10
    • 0032999582 scopus 로고    scopus 로고
    • Patterns of evolutionary rate variation among genes of the anthocyanin biosynthetic pathway
    • Rausher MD, Miller RE, Tiffin P. 1999. Patterns of evolutionary rate variation among genes of the anthocyanin biosynthetic pathway. Mol Biol Evol 16:266-274.
    • (1999) Mol Biol Evol , vol.16 , pp. 266-274
    • Rausher, M.D.1    Miller, R.E.2    Tiffin, P.3
  • 11
    • 0242497865 scopus 로고    scopus 로고
    • Evolutionary rate variation in anthocyanin pathway genes
    • Lu Y, Rausher MD. 2003. Evolutionary rate variation in anthocyanin pathway genes. Mol Blol Evol 20:1844-1853.
    • (2003) Mol Blol Evol , vol.20 , pp. 1844-1853
    • Lu, Y.1    Rausher, M.D.2
  • 13
    • 0038075568 scopus 로고    scopus 로고
    • Contrasting selection pressures on components of Ras-mediated signal transduction in Drosophila
    • Riley RM, Jin W, Gibson G. 2003. Contrasting selection pressures on components of Ras-mediated signal transduction in Drosophila. Mol Ecol 12:1315-1324.
    • (2003) Mol Ecol , vol.12 , pp. 1315-1324
    • Riley, R.M.1    Jin, W.2    Gibson, G.3
  • 15
    • 0037338480 scopus 로고    scopus 로고
    • Sex-determination gene and pathway evolution in nematodes
    • Stothard P, Pilgrim D. 2003. Sex-determination gene and pathway evolution in nematodes. BioEssays 25:221-231.
    • (2003) BioEssays , vol.25 , pp. 221-231
    • Stothard, P.1    Pilgrim, D.2
  • 16
    • 0029742909 scopus 로고    scopus 로고
    • Aoz9 expression during gonadal development implies a conserved role for the gene in testis defferentiation in mammals and birds
    • Morais da Silva S, Hacker A, Harley V, Goodfellow P, Swain A, Lovell-Badge P. 1996. Aoz9 expression during gonadal development implies a conserved role for the gene in testis defferentiation in mammals and birds. Nat Genet 14:62-68.
    • (1996) Nat Genet , vol.14 , pp. 62-68
    • Morais Da Silva, S.1    Hacker, A.2    Harley, V.3    Goodfellow, P.4    Swain, A.5    Lovell-Badge, P.6
  • 18
    • 0031840350 scopus 로고    scopus 로고
    • The Ceratitis capitata homologue of the Drosophila sex-determining gene Sex-lethal is structurally conserved, but not sex-specifically regulated
    • Saccone G, Peluso I, Artiaco D, Giordano E, Bopp D, Polito LC. 1998. The Ceratitis capitata homologue of the Drosophila sex-determining gene Sex-lethal is structurally conserved, but not sex-specifically regulated. Development 125:1495-1500.
    • (1998) Development , vol.125 , pp. 1495-1500
    • Saccone, G.1    Peluso, I.2    Artiaco, D.3    Giordano, E.4    Bopp, D.5    Polito, L.C.6
  • 19
    • 0031864465 scopus 로고    scopus 로고
    • Sex-lethal, the master sex-determining gene in Drosophila, is not sex specifically regulated in Musca domestica
    • Meise M, Hilfiker-Kleiner D, Dubendorfer A, Brunner C, Nothinger R, Bopp D. 1998. Sex-lethal, the master sex-determining gene in Drosophila, is not sex specifically regulated in Musca domestica. Development 125:1487-1494.
    • (1998) Development , vol.125 , pp. 1487-1494
    • Meise, M.1    Hilfiker-Kleiner, D.2    Dubendorfer, A.3    Brunner, C.4    Nothinger, R.5    Bopp, D.6
  • 21
    • 0033369552 scopus 로고    scopus 로고
    • Analysis of selection on enzyme polymorphisms
    • Eanes WF. 1999. Analysis of selection on enzyme polymorphisms. Ann Rev Ecol Syst 30:301-326.
    • (1999) Ann Rev Ecol Syst , vol.30 , pp. 301-326
    • Eanes, W.F.1
  • 22
    • 0035051292 scopus 로고    scopus 로고
    • Clinal variation for amino acid polymorphisms at the Pgm locus in Drosophila melanogaster
    • Verrelli BC, Eanes WF. 2001. Clinal variation for amino acid polymorphisms at the Pgm locus in Drosophila melanogaster. Genetics 157:1649-1663.
    • (2001) Genetics , vol.157 , pp. 1649-1663
    • Verrelli, B.C.1    Eanes, W.F.2
  • 23
  • 24
    • 0034533940 scopus 로고    scopus 로고
    • Extensive amino acid polymorphism at the Pgm locus is consistent with adaptive protein evolution in Drosophila melanogaster
    • Verrelli BC, Eanes WF. 2000. Extensive amino acid polymorphism at the Pgm locus is consistent with adaptive protein evolution in Drosophila melanogaster. Genetics 156:1737-1752.
    • (2000) Genetics , vol.156 , pp. 1737-1752
    • Verrelli, B.C.1    Eanes, W.F.2
  • 25
    • 0027304241 scopus 로고
    • Evidence for adaptive evolution of the G6pd gene in the Drosophila melanogaster and D. simulans lineages
    • Eanes WF, Kirchner M, Yoon J. 1993. Evidence for adaptive evolution of the G6pd gene in the Drosophila melanogaster and D. simulans lineages. Proc Natl Acad Sci USA 90:7475-7479.
    • (1993) Proc Natl Acad Sci USA , vol.90 , pp. 7475-7479
    • Eanes, W.F.1    Kirchner, M.2    Yoon, J.3
  • 26
    • 1842407790 scopus 로고    scopus 로고
    • Structural and functional differences in the promoter and 5′ flanking region of Ldh-B within and between populations of the teleost Fundulus heteroclitus
    • Schulte PM, Gomez-Chiarri M, Powers DA. 1997. Structural and functional differences in the promoter and 5′ flanking region of Ldh-B within and between populations of the teleost Fundulus heteroclitus. Genetics 145:759-769.
    • (1997) Genetics , vol.145 , pp. 759-769
    • Schulte, P.M.1    Gomez-Chiarri, M.2    Powers, D.A.3
  • 27
    • 0017740198 scopus 로고
    • Adaptation at specific loci. I. Natural selection on phosphoglucose isomerase of Colias butterflies: Biochemical and population aspects
    • Watt WB. 1977. Adaptation at specific loci. I. Natural selection on phosphoglucose isomerase of Colias butterflies: biochemical and population aspects. Genetics 87:177-194.
    • (1977) Genetics , vol.87 , pp. 177-194
    • Watt, W.B.1
  • 29
    • 0032879544 scopus 로고    scopus 로고
    • Genetic control of flower morphogenesis in Arabidopsis thaliana: A logical analysis
    • Mendoza L, Thieffry D, Alvarez-Buylla ER. 1999. Genetic control of flower morphogenesis in Arabidopsis thaliana: a logical analysis. Bioinformatics 15:593-606.
    • (1999) Bioinformatics , vol.15 , pp. 593-606
    • Mendoza, L.1    Thieffry, D.2    Alvarez-Buylla, E.R.3
  • 30
    • 0035707602 scopus 로고    scopus 로고
    • Toward a new synthesis: Population genetics and evolutionary developmental biology
    • Johnson NA, Porter AH. 2001. Toward a new synthesis: population genetics and evolutionary developmental biology. Genetica 112-113: 45-58.
    • (2001) Genetica , vol.112-113 , pp. 45-58
    • Johnson, N.A.1    Porter, A.H.2
  • 32
    • 0035843145 scopus 로고    scopus 로고
    • The protein-protein interaction map of Heficobacter pylori
    • Rain JC, Selig L, De Reuse H, Battaglia V, Reverdy C, et al. 2001. The protein-protein interaction map of Heficobacter pylori. Nature 409:211-215.
    • (2001) Nature , vol.409 , pp. 211-215
    • Rain, J.C.1    Selig, L.2    De Reuse, H.3    Battaglia, V.4    Reverdy, C.5
  • 34
    • 0141993704 scopus 로고    scopus 로고
    • Gene-Coexpression network for global discovery of conserved genetic modules
    • Stuart JM, Segal E, Koller D, Kim SK. 2003. Gene-Coexpression network for global discovery of conserved genetic modules. Science 302:249-254.
    • (2003) Science , vol.302 , pp. 249-254
    • Stuart, J.M.1    Segal, E.2    Koller, D.3    Kim, S.K.4
  • 35
    • 0037423828 scopus 로고    scopus 로고
    • How the global structure of protein interacion networks evolves
    • Wagner A. 2003. How the global structure of protein interacion networks evolves. Proc R Soc Lond B 270:457-466.
    • (2003) Proc R Soc Lond B , vol.270 , pp. 457-466
    • Wagner, A.1
  • 36
    • 0038483826 scopus 로고    scopus 로고
    • Emergence of scaling in random networks
    • Barabasi AL, Albert R. 1999. Emergence of scaling in random networks. Science 286:509-512.
    • (1999) Science , vol.286 , pp. 509-512
    • Barabasi, A.L.1    Albert, R.2
  • 37
    • 0642285840 scopus 로고    scopus 로고
    • Preferential attachment in the protein network evolution
    • Eisenberg E, Levanon EY. 2003. Preferential attachment in the protein network evolution. Phys Rev Lett 91:138701.
    • (2003) Phys Rev Lett , vol.91 , pp. 138701
    • Eisenberg, E.1    Levanon, E.Y.2
  • 38
    • 0242300098 scopus 로고    scopus 로고
    • Evolution of the yeast protein interaction network
    • Qin H, Lu HH, Wu WB, Li WH. 2003. Evolution of the yeast protein interaction network. Proc Natl Acad Sci USA 100:12820-12824.
    • (2003) Proc Natl Acad Sci USA , vol.100 , pp. 12820-12824
    • Qin, H.1    Lu, H.H.2    Wu, W.B.3    Li, W.H.4
  • 39
    • 0842291785 scopus 로고    scopus 로고
    • No simple dependence between protein evolution rate and the number of protein-protein interactions: Only the most prolific interactors tend to evolve slowly
    • Jordan IK, Wolf YI, Koonin EV. 2003. No simple dependence between protein evolution rate and the number of protein-protein interactions: only the most prolific interactors tend to evolve slowly. BMC Evol Biol 3:1.
    • (2003) BMC Evol Biol , vol.3 , pp. 1
    • Jordan, I.K.1    Wolf, Y.I.2    Koonin, E.V.3
  • 41
    • 2542421387 scopus 로고    scopus 로고
    • Genomic function (communication arising): Rate of evolution and gene dispensability
    • Pal C, Papp B, Hurst LD. 2001. Genomic function (communication arising): Rate of evolution and gene dispensability. Nature 411:1046-1049.
    • (2001) Nature , vol.411 , pp. 1046-1049
    • Pal, C.1    Papp, B.2    Hurst, L.D.3
  • 42
    • 0036578795 scopus 로고    scopus 로고
    • Network motifs in the transcriptional regulation network of Escherichia coli
    • Shen-Orr SS, Milo R, Mangan S, Alon U. 2002. Network motifs in the transcriptional regulation network of Escherichia coli. Nat Genet 31:64-68.
    • (2002) Nat Genet , vol.31 , pp. 64-68
    • Shen-Orr, S.S.1    Milo, R.2    Mangan, S.3    Alon, U.4
  • 43
    • 0141484611 scopus 로고    scopus 로고
    • Evolutionary conservation of motif constituents in the yeast protein interaction network
    • Wuchty S, Oltavi ZN, Barabasi AL. 2003. Evolutionary conservation of motif constituents in the yeast protein interaction network. Nat Genet 35:176-179.
    • (2003) Nat Genet , vol.35 , pp. 176-179
    • Wuchty, S.1    Oltavi, Z.N.2    Barabasi, A.L.3
  • 45
    • 0037174671 scopus 로고    scopus 로고
    • Transcriptional regulatory networks in Saccharomyces cerevisiae
    • Lee TI, Rinaldi NJ, Robert F, Odom DT, Bar-Joseph Z, et al. 2002. Transcriptional regulatory networks in Saccharomyces cerevisiae. Science 298:799-804.
    • (2002) Science , vol.298 , pp. 799-804
    • Lee, T.I.1    Rinaldi, N.J.2    Robert, F.3    Odom, D.T.4    Bar-Joseph, Z.5
  • 46
    • 0034029892 scopus 로고    scopus 로고
    • Robustness against mutations in genetic networks of yeast
    • Wagner A. 2000. Robustness against mutations in genetic networks of yeast. Nat Genet 24:355-361.
    • (2000) Nat Genet , vol.24 , pp. 355-361
    • Wagner, A.1
  • 47
    • 0030450059 scopus 로고    scopus 로고
    • Functional analysis of the genes of yeast chromosome V by genetic footprinting
    • Smith V, Chou KN, Lashkari D, Botstein D, Brown PO. 1997. Functional analysis of the genes of yeast chromosome V by genetic footprinting. Science 274:2069-2074.
    • (1997) Science , vol.274 , pp. 2069-2074
    • Smith, V.1    Chou, K.N.2    Lashkari, D.3    Botstein, D.4    Brown, P.O.5
  • 48
    • 0035125780 scopus 로고    scopus 로고
    • Functional genomics: The worm scores a knockout
    • Kim SK. 2001. Functional genomics: The worm scores a knockout. Curr Biol 11:R85-R87.
    • (2001) Curr Biol , vol.11
    • Kim, S.K.1
  • 49
    • 0036724987 scopus 로고    scopus 로고
    • Biochemical networking contributes more to genetic buffering in human and mouse metabolic pathways than does gene duplication
    • Kitami T, Nadeau JH. 2002. Biochemical networking contributes more to genetic buffering in human and mouse metabolic pathways than does gene duplication. Nat Genet 32:191-194.
    • (2002) Nat Genet , vol.32 , pp. 191-194
    • Kitami, T.1    Nadeau, J.H.2
  • 50
    • 0035198377 scopus 로고    scopus 로고
    • Modelling genetic architecture: A multilinear theory of gene interaction
    • Hansen TF, Wagner GP. 2001. Modelling genetic architecture: A multilinear theory of gene interaction. Theor Pop Biol 59:61-86.
    • (2001) Theor Pop Biol , vol.59 , pp. 61-86
    • Hansen, T.F.1    Wagner, G.P.2
  • 51
    • 0034051465 scopus 로고    scopus 로고
    • Canalization in evolutionary genetics: A stabilizing theory?
    • Gibson G, Wagner GP. 2000. Canalization in evolutionary genetics: a stabilizing theory? Bioessays 22:372-380.
    • (2000) Bioessays , vol.22 , pp. 372-380
    • Gibson, G.1    Wagner, G.P.2
  • 52
    • 0034046086 scopus 로고    scopus 로고
    • Gene regulatory networks generating the phenomena of additivity, dominance and epistasis
    • Omholt SW, Plahte E, Oyehaug L, Xiang K. 2000. Gene regulatory networks generating the phenomena of additivity, dominance and epistasis. Genetics 155:969-980.
    • (2000) Genetics , vol.155 , pp. 969-980
    • Omholt, S.W.1    Plahte, E.2    Oyehaug, L.3    Xiang, K.4


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