-
1
-
-
14544279484
-
Inverse relationship between evolutionary rate and age of mammalian genes
-
Alba M.M., and Castresana J. Inverse relationship between evolutionary rate and age of mammalian genes. Mol. Biol. Evol. 22 (2004) 598-606
-
(2004)
Mol. Biol. Evol.
, vol.22
, pp. 598-606
-
-
Alba, M.M.1
Castresana, J.2
-
2
-
-
0026757345
-
Baculovirus gp64 envelope glycoprotein is sufficient to mediate pH-dependent membrane fusion
-
Blissard G.W., and Wenz J.R. Baculovirus gp64 envelope glycoprotein is sufficient to mediate pH-dependent membrane fusion. J. Virol. 66 (1992) 6829-6835
-
(1992)
J. Virol.
, vol.66
, pp. 6829-6835
-
-
Blissard, G.W.1
Wenz, J.R.2
-
3
-
-
0002433886
-
Family Baculoviridae
-
van Regenmortel M.H.V., Fauquet C.M., Bishop D.H.L., Carstens E.B., Estes M.K., Lemon S.M., Maniloff J., Mayo M.A., McGeoch D.J., Pringle C.R., and Wickner R.B. (Eds), Academic Press, San Diego, Calif
-
Blissard G.W., Black B., Crook N., Keddie B.A., Possee R., Rohrmann G., Theilmann D., and Volkman L. Family Baculoviridae. In: van Regenmortel M.H.V., Fauquet C.M., Bishop D.H.L., Carstens E.B., Estes M.K., Lemon S.M., Maniloff J., Mayo M.A., McGeoch D.J., Pringle C.R., and Wickner R.B. (Eds). Virus Taxonomy: Classification and Nomenclature of viruses. Seventh report of the International Committee on Taxonomy of Viruses (2000), Academic Press, San Diego, Calif 195-202
-
(2000)
Virus Taxonomy: Classification and Nomenclature of viruses. Seventh report of the International Committee on Taxonomy of Viruses
, pp. 195-202
-
-
Blissard, G.W.1
Black, B.2
Crook, N.3
Keddie, B.A.4
Possee, R.5
Rohrmann, G.6
Theilmann, D.7
Volkman, L.8
-
4
-
-
0029864251
-
Baculovirus-mediated gene transfer into mammalian cells
-
Boyce F.M., and Bucher N.L.R. Baculovirus-mediated gene transfer into mammalian cells. Proc. Natl. Acad. Sci. U.S.A. 93 (1996) 2348-2352
-
(1996)
Proc. Natl. Acad. Sci. U.S.A.
, vol.93
, pp. 2348-2352
-
-
Boyce, F.M.1
Bucher, N.L.R.2
-
5
-
-
0022991916
-
Autographa californica nuclear polyhedrosis virus efficiently enters but does not replicate in poikilothemic vertebrate cells
-
Brusca J., Summers M., Couch J., and Courtney L. Autographa californica nuclear polyhedrosis virus efficiently enters but does not replicate in poikilothemic vertebrate cells. Intervirology 26 (1986) 207-222
-
(1986)
Intervirology
, vol.26
, pp. 207-222
-
-
Brusca, J.1
Summers, M.2
Couch, J.3
Courtney, L.4
-
6
-
-
0032608072
-
Group II nucleopolyhedrovirus subgroups revealed by phylogenetic analysis of polyhedrin and DNA polymerase gene sequences
-
Bulach D.M., Kumar C.A., Zaia A., Liang B., and Tribe D.E. Group II nucleopolyhedrovirus subgroups revealed by phylogenetic analysis of polyhedrin and DNA polymerase gene sequences. J. Invertebr. Pathol. 73 (1999) 59-73
-
(1999)
J. Invertebr. Pathol.
, vol.73
, pp. 59-73
-
-
Bulach, D.M.1
Kumar, C.A.2
Zaia, A.3
Liang, B.4
Tribe, D.E.5
-
7
-
-
33745616793
-
Accelerated evolutionary rate may be responsible for the emergence of lineage-specific genes in ascomycoa
-
Cai J.J., Woo P.C.Y., Lau P., Smith S.K., and Yuen D.K. Accelerated evolutionary rate may be responsible for the emergence of lineage-specific genes in ascomycoa. J. Mol. Evol. 63 (2006) 1-11
-
(2006)
J. Mol. Evol.
, vol.63
, pp. 1-11
-
-
Cai, J.J.1
Woo, P.C.Y.2
Lau, P.3
Smith, S.K.4
Yuen, D.K.5
-
8
-
-
0023193484
-
Baculovirus interaction with non-target organisms: a virus-borne reporter gene is not expressed in two mammalian cell lines
-
Carbonell L.F., and Miller L.K. Baculovirus interaction with non-target organisms: a virus-borne reporter gene is not expressed in two mammalian cell lines. Appl. Environ. Microb. 53 (1987) 1412-1417
-
(1987)
Appl. Environ. Microb.
, vol.53
, pp. 1412-1417
-
-
Carbonell, L.F.1
Miller, L.K.2
-
9
-
-
52649142203
-
Genomic and host range studies of Maruca vitrata nucleopolyhedrovirus
-
Chen Y.R., Wu C.Y., Lee S.T., Wu Y.J., Lo C.F., Tsai M.F., and Wang C.H. Genomic and host range studies of Maruca vitrata nucleopolyhedrovirus. J. Gen. Virol. 89 (2008) 2315-2330
-
(2008)
J. Gen. Virol.
, vol.89
, pp. 2315-2330
-
-
Chen, Y.R.1
Wu, C.Y.2
Lee, S.T.3
Wu, Y.J.4
Lo, C.F.5
Tsai, M.F.6
Wang, C.H.7
-
10
-
-
26444621352
-
Why highly expressed proteins evolve slowly
-
Drummond D.A., Bloom J.D., Adami C., Wilke C.O., and Arnold F.H. Why highly expressed proteins evolve slowly. Proc. Natl. Acad. Sci. U.S.A. 102 (2005) 14338-14343
-
(2005)
Proc. Natl. Acad. Sci. U.S.A.
, vol.102
, pp. 14338-14343
-
-
Drummond, D.A.1
Bloom, J.D.2
Adami, C.3
Wilke, C.O.4
Arnold, F.H.5
-
11
-
-
0037177560
-
Evolutionary rate in the protein interaction network
-
Fraser H.B., Hirsh A.E., Steinmetz L.M., Scharfe C., and Feldman M.W. Evolutionary rate in the protein interaction network. Science 296 (2002) 750-752
-
(2002)
Science
, vol.296
, pp. 750-752
-
-
Fraser, H.B.1
Hirsh, A.E.2
Steinmetz, L.M.3
Scharfe, C.4
Feldman, M.W.5
-
12
-
-
2942678187
-
Evolutionary rate depends on number of protein-protein interactions independently of gene expression level
-
Fraser H.B., and Hirsh A.E. Evolutionary rate depends on number of protein-protein interactions independently of gene expression level. BMC Evol. Biol. 4 (2004) 14
-
(2004)
BMC Evol. Biol.
, vol.4
, pp. 14
-
-
Fraser, H.B.1
Hirsh, A.E.2
-
13
-
-
0036665416
-
Baculovirus as Mammalian cell expression vector for gene therapy: an emerging strategy
-
Ghosh S., Parvez M.K., Banerjee K., Sarin S.K., and Hasnain S.E. Baculovirus as Mammalian cell expression vector for gene therapy: an emerging strategy. Mol. Ther. 6 (2002) 5-11
-
(2002)
Mol. Ther.
, vol.6
, pp. 5-11
-
-
Ghosh, S.1
Parvez, M.K.2
Banerjee, K.3
Sarin, S.K.4
Hasnain, S.E.5
-
14
-
-
0038489417
-
Comparative analysis of the genomes of Rachiplusia ou and Autographa californica multiple nucleopolyhedroviruses
-
Harrison R.L., and Bonning B.C. Comparative analysis of the genomes of Rachiplusia ou and Autographa californica multiple nucleopolyhedroviruses. J. Gen. Virol. 84 (2003) 1827-1842
-
(2003)
J. Gen. Virol.
, vol.84
, pp. 1827-1842
-
-
Harrison, R.L.1
Bonning, B.C.2
-
15
-
-
0037383240
-
Genomic clocks and evolutionary timescales
-
Hedges S.B., and Kumar S. Genomic clocks and evolutionary timescales. Trends Genet. 19 (2003) 200-206
-
(2003)
Trends Genet.
, vol.19
, pp. 200-206
-
-
Hedges, S.B.1
Kumar, S.2
-
16
-
-
0034864707
-
Use of whole genome sequence data to infer baculovirus phylogeny
-
Herniou E.A., Luque T., Chen X., Vlak J.M., Winstanley D., Cory J., and O'Reilly D.R. Use of whole genome sequence data to infer baculovirus phylogeny. J. Virol. 75 (2001) 8117-8126
-
(2001)
J. Virol.
, vol.75
, pp. 8117-8126
-
-
Herniou, E.A.1
Luque, T.2
Chen, X.3
Vlak, J.M.4
Winstanley, D.5
Cory, J.6
O'Reilly, D.R.7
-
19
-
-
0141565071
-
Patterns of intra- and interhost nonsynonymous variation reveal strong purifying selection in dengue virus
-
Holmes E.C. Patterns of intra- and interhost nonsynonymous variation reveal strong purifying selection in dengue virus. J. Virol. 77 (2003) 11296-11298
-
(2003)
J. Virol.
, vol.77
, pp. 11296-11298
-
-
Holmes, E.C.1
-
20
-
-
32844463672
-
Molecular identification and phylogenetic analysis of baculoviruses from Lepidopteran
-
Jehle J.A., Lange M., Wang H., Hu Z., Wang Y., and Hauschild R. Molecular identification and phylogenetic analysis of baculoviruses from Lepidopteran. Virology 346 (2006) 180-193
-
(2006)
Virology
, vol.346
, pp. 180-193
-
-
Jehle, J.A.1
Lange, M.2
Wang, H.3
Hu, Z.4
Wang, Y.5
Hauschild, R.6
-
21
-
-
6344241652
-
Conservation and coevolution in the scale-free human gene coexpression network
-
Jordan I.K., Mariño-Ramírez L., Wolf Y.I., and Koonin E.V. Conservation and coevolution in the scale-free human gene coexpression network. Mol. Biol. Evol. 21 (2004) 2058-2070
-
(2004)
Mol. Biol. Evol.
, vol.21
, pp. 2058-2070
-
-
Jordan, I.K.1
Mariño-Ramírez, L.2
Wolf, Y.I.3
Koonin, E.V.4
-
22
-
-
13844281341
-
Comparative analysis of protein coding sequences from human, mouse and the domesticated pig
-
Jørgensen F.G., Hobolth A., Hornshøj H., Bendixen C., Fredholm M., and Schierup M.H. Comparative analysis of protein coding sequences from human, mouse and the domesticated pig. BMC Biology 3 (2005) 2
-
(2005)
BMC Biology
, vol.3
, pp. 2
-
-
Jørgensen, F.G.1
Hobolth, A.2
Hornshøj, H.3
Bendixen, C.4
Fredholm, M.5
Schierup, M.H.6
-
23
-
-
4344670467
-
Molecular evolution and circulation patterns of human respiratory syncytial virus subgroup A: positively selected sites in the attachment G glycoprotein
-
Kalina T.Z., Lemey P., Vandamme A.M., and Ranst M.V. Molecular evolution and circulation patterns of human respiratory syncytial virus subgroup A: positively selected sites in the attachment G glycoprotein. J. Virol. 78 (2004) 4675-4683
-
(2004)
J. Virol.
, vol.78
, pp. 4675-4683
-
-
Kalina, T.Z.1
Lemey, P.2
Vandamme, A.M.3
Ranst, M.V.4
-
24
-
-
3242810318
-
MEGA3.0: An integrated software for molecular evolutionary genetics analysis and sequence alignment
-
Kumar S., Tamura K., and Nei M. MEGA3.0: An integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform. 5 (2004) 150-163
-
(2004)
Brief Bioinform.
, vol.5
, pp. 150-163
-
-
Kumar, S.1
Tamura, K.2
Nei, M.3
-
25
-
-
20044381494
-
The GP64 protein of Autographa californica multiple nucleopolyhedrovirus rescues Helicoverpa armigera nucleopoly hedrovirus transduction in mammalian cells
-
Liang C., Song J., and Chen X. The GP64 protein of Autographa californica multiple nucleopolyhedrovirus rescues Helicoverpa armigera nucleopoly hedrovirus transduction in mammalian cells. J. Gen. Virol. 86 (2005) 1629-1635
-
(2005)
J. Gen. Virol.
, vol.86
, pp. 1629-1635
-
-
Liang, C.1
Song, J.2
Chen, X.3
-
26
-
-
0037213637
-
Ac23, an envelope fusion protein homolog in the baculovirus Autographa californica multicapsid nucleopolyhedrovirus, is a viral pathoge.nicity factor
-
Lung O.Y., Cruz-Alvarez M., and Blissard G.W. Ac23, an envelope fusion protein homolog in the baculovirus Autographa californica multicapsid nucleopolyhedrovirus, is a viral pathoge.nicity factor. J. Virol. 77 (2003) 328-339
-
(2003)
J. Virol.
, vol.77
, pp. 328-339
-
-
Lung, O.Y.1
Cruz-Alvarez, M.2
Blissard, G.W.3
-
27
-
-
0035012056
-
Synonymous codon usage, accuracy of translation, and gene length in Caenorhabditis elegants
-
Marais G., and Duret L. Synonymous codon usage, accuracy of translation, and gene length in Caenorhabditis elegants. J. Mol. Evol. 52 (2001) 275-280
-
(2001)
J. Mol. Evol.
, vol.52
, pp. 275-280
-
-
Marais, G.1
Duret, L.2
-
28
-
-
42749083794
-
AcMNPV ac143(odv-e18) is essential for mediating budded virus production and is the 30th baculovirus core gene
-
McCarthy C.B., and Theilmann D.A. AcMNPV ac143(odv-e18) is essential for mediating budded virus production and is the 30th baculovirus core gene. Virology 375 (2008) 277-291
-
(2008)
Virology
, vol.375
, pp. 277-291
-
-
McCarthy, C.B.1
Theilmann, D.A.2
-
29
-
-
0004156707
-
-
Miller L.K. (Ed), Plenum Press, New York, N.Y
-
In: Miller L.K. (Ed). The Baculoviruses (1997), Plenum Press, New York, N.Y
-
(1997)
The Baculoviruses
-
-
-
30
-
-
0029898597
-
The GP64 envelope fusion protein is an essential baculovirus protein required for cell-to-cell transmission of infection
-
Monsma S.A., Oomens A.G., and Blissard G.W. The GP64 envelope fusion protein is an essential baculovirus protein required for cell-to-cell transmission of infection. J. Virol. 70 (1996) 4607-4616
-
(1996)
J. Virol.
, vol.70
, pp. 4607-4616
-
-
Monsma, S.A.1
Oomens, A.G.2
Blissard, G.W.3
-
32
-
-
0033557048
-
Requirement for GP64 to drive efficient budding of Autographa californica multicapsid Nucleopolyhedrovirus
-
Oomens A.G.P., and Blissard G.W. Requirement for GP64 to drive efficient budding of Autographa californica multicapsid Nucleopolyhedrovirus. Virology 254 (1999) 297-314
-
(1999)
Virology
, vol.254
, pp. 297-314
-
-
Oomens, A.G.P.1
Blissard, G.W.2
-
33
-
-
0034978556
-
Highly expressed genes in yeast evolve slowly
-
Pal C., Papp B., and Hurst L.D. Highly expressed genes in yeast evolve slowly. Genetics 158 (2001) 927-931
-
(2001)
Genetics
, vol.158
, pp. 927-931
-
-
Pal, C.1
Papp, B.2
Hurst, L.D.3
-
34
-
-
1242284655
-
An analysis of determinants of amino acid substitution rates in bacterial proteins
-
Rocha E.P., and Danchin A. An analysis of determinants of amino acid substitution rates in bacterial proteins. Mol. Biol. Evol. 21 (2004) 108-116
-
(2004)
Mol. Biol. Evol.
, vol.21
, pp. 108-116
-
-
Rocha, E.P.1
Danchin, A.2
-
35
-
-
0035967987
-
The origins of acquired immune deficiency syndrome viruses: where and when?
-
Sharp P.M., Bailes E., Chaudhuri R.R., Rodenburg C.M., Santiago M.O., and Hahn B.H. The origins of acquired immune deficiency syndrome viruses: where and when?. Philos. Trans. R. Soc. Lond. Biol. Sci. 356 (2001) 867-876
-
(2001)
Philos. Trans. R. Soc. Lond. Biol. Sci.
, vol.356
, pp. 867-876
-
-
Sharp, P.M.1
Bailes, E.2
Chaudhuri, R.R.3
Rodenburg, C.M.4
Santiago, M.O.5
Hahn, B.H.6
-
36
-
-
17244367886
-
Functional genomic analysis of the rates of protein evolution
-
Wall D.P., Hirsh A.E., Fraser H.B., Kumm J., Giaever G., Eisen M.B., and Feldman M.W. Functional genomic analysis of the rates of protein evolution. Proc. Natl. Acad. Sci. U.S.A. 102 (2005) 5483-5488
-
(2005)
Proc. Natl. Acad. Sci. U.S.A.
, vol.102
, pp. 5483-5488
-
-
Wall, D.P.1
Hirsh, A.E.2
Fraser, H.B.3
Kumm, J.4
Giaever, G.5
Eisen, M.B.6
Feldman, M.W.7
-
38
-
-
52649112215
-
The F-like protein Ac23 enhances the infectivity of the budded virus of gp64-null AcMNPV pseudotyped with baculovirus envelope fusion protein F
-
Wang M., Tan Y., Yin F., Deng F., Vlak J.M., Hu Z., and Wang H. The F-like protein Ac23 enhances the infectivity of the budded virus of gp64-null AcMNPV pseudotyped with baculovirus envelope fusion protein F. J. Virol. 82 (2008) 9800-9804
-
(2008)
J. Virol.
, vol.82
, pp. 9800-9804
-
-
Wang, M.1
Tan, Y.2
Yin, F.3
Deng, F.4
Vlak, J.M.5
Hu, Z.6
Wang, H.7
-
39
-
-
0037213893
-
Early synthesis of budded virus envelope fusion protein GP64 enhances Autographa californic multicapsid nucleopolyhedrovirus virulence in orally infected heliothis virescens
-
Washburn J.O., Chan E.Y., Volkman L.E., Aumiller J.J., and Jarvis D.L. Early synthesis of budded virus envelope fusion protein GP64 enhances Autographa californic multicapsid nucleopolyhedrovirus virulence in orally infected heliothis virescens. J. Virol. 77 (2003) 280-290
-
(2003)
J. Virol.
, vol.77
, pp. 280-290
-
-
Washburn, J.O.1
Chan, E.Y.2
Volkman, L.E.3
Aumiller, J.J.4
Jarvis, D.L.5
-
40
-
-
22644432782
-
Sequence analysis of the complete genome of Trichoplusia ni single nucleopolyhedrovirus and the identification of a baculoviral phololyase gene
-
Willis L.G., Siepp R., Stewart T.M., Erlandson M.A., and Theilmann D.A. Sequence analysis of the complete genome of Trichoplusia ni single nucleopolyhedrovirus and the identification of a baculoviral phololyase gene. Virology 338 (2005) 209-226
-
(2005)
Virology
, vol.338
, pp. 209-226
-
-
Willis, L.G.1
Siepp, R.2
Stewart, T.M.3
Erlandson, M.A.4
Theilmann, D.A.5
-
41
-
-
0038708556
-
Rate of protein evolution versus fitness effect of gene deletion
-
Yang J., Gu Z.L., and Li W.H. Rate of protein evolution versus fitness effect of gene deletion. Mol. Biol. Evol. 20 (2003) 772-774
-
(2003)
Mol. Biol. Evol.
, vol.20
, pp. 772-774
-
-
Yang, J.1
Gu, Z.L.2
Li, W.H.3
-
42
-
-
0029892459
-
Approximate methods for estimating the pattern of nucleotide substitution and the variation of substitution rates among sites
-
Yang Z., and Kumar S. Approximate methods for estimating the pattern of nucleotide substitution and the variation of substitution rates among sites. Mol. Biol. Evol. 13 (1996) 650-659
-
(1996)
Mol. Biol. Evol.
, vol.13
, pp. 650-659
-
-
Yang, Z.1
Kumar, S.2
-
43
-
-
0030683599
-
PAML: a program package for phylogenetic analysis by maximum likelihood
-
Yang Z. PAML: a program package for phylogenetic analysis by maximum likelihood. Comput. Appl. Biosci. 13 (1997) 555-556
-
(1997)
Comput. Appl. Biosci.
, vol.13
, pp. 555-556
-
-
Yang, Z.1
-
44
-
-
0031897964
-
Likelihood ratio tests for detecting positive selection and application to primate lysozyme evolution
-
Yang Z. Likelihood ratio tests for detecting positive selection and application to primate lysozyme evolution. Mol. Biol. Evol. 15 (1998) 568-573
-
(1998)
Mol. Biol. Evol.
, vol.15
, pp. 568-573
-
-
Yang, Z.1
-
45
-
-
0033979433
-
Estimating synonymous and nonsynonymous substitution rates under realistic evolutionary models
-
Yang Z., and Nielsen R. Estimating synonymous and nonsynonymous substitution rates under realistic evolutionary models. Mol. Biol. Evol. 17 (2000) 32-43
-
(2000)
Mol. Biol. Evol.
, vol.17
, pp. 32-43
-
-
Yang, Z.1
Nielsen, R.2
-
46
-
-
16344369543
-
Significant impact of protein dispensability on the instantaneous rate of protein evolution
-
Zhang J., and He X. Significant impact of protein dispensability on the instantaneous rate of protein evolution. Mol. Biol. Evol. 22 (2005) 1147-1155
-
(2005)
Mol. Biol. Evol.
, vol.22
, pp. 1147-1155
-
-
Zhang, J.1
He, X.2
-
47
-
-
0017184736
-
Evolutionary processes and evolutionary noise at the molecular level. I. Functional density in proteins
-
Zuckerkandl E. Evolutionary processes and evolutionary noise at the molecular level. I. Functional density in proteins. J. Mol. Evol. 7 (1976) 269-311
-
(1976)
J. Mol. Evol.
, vol.7
, pp. 269-311
-
-
Zuckerkandl, E.1
|