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Volumn 17, Issue 5, 2009, Pages 844-850

Analysis of lentiviral vector integration in HIV+ study subjects receiving autologous infusions of gene modified CD4+ T cells

Author keywords

[No Author keywords available]

Indexed keywords

LENTIVIRUS VECTOR;

EID: 67349132909     PISSN: 15250016     EISSN: 15250024     Source Type: Journal    
DOI: 10.1038/mt.2009.16     Document Type: Article
Times cited : (126)

References (38)
  • 4
    • 0037448352 scopus 로고    scopus 로고
    • A serious adverse event after successful gene therapy for X-linked severe combined immunodeficiency
    • Hacein-Bey-Abina, S, von Kalle, C, Schmidt, M, Le Deist, F, Wulffraat, N, McIntyre, E et al. (2003). A serious adverse event after successful gene therapy for X-linked severe combined immunodeficiency. N Engl J Med 348: 255-256.
    • (2003) N Engl J Med , vol.348 , pp. 255-256
    • Hacein-Bey-Abina, S.1    von Kalle, C.2    Schmidt, M.3    Le Deist, F.4    Wulffraat, N.5    McIntyre, E.6
  • 5
    • 51349090473 scopus 로고    scopus 로고
    • Insertional oncogenesis in 4 patients after retrovirus-mediated gene therapy of SCID-X1
    • Hacein-Bey-Abina, S, Garrigue, A, Wang, GP, Soulier, J, Lim, A, Morillon, E et al. (2008). Insertional oncogenesis in 4 patients after retrovirus-mediated gene therapy of SCID-X1. J Clin Invest 118: 3132-3142.
    • (2008) J Clin Invest , vol.118 , pp. 3132-3142
    • Hacein-Bey-Abina, S.1    Garrigue, A.2    Wang, G.P.3    Soulier, J.4    Lim, A.5    Morillon, E.6
  • 6
    • 34249906359 scopus 로고    scopus 로고
    • Vector integration is nonrandom and clustered and influences the fate of lymphopoiesis in SCID-X1 gene therapy
    • Deichmann, A, Hacein-Bey-Abina, S, Schmidt, M, Garrigue, A, Brugman, MH, Hu, J et al. (2007). Vector integration is nonrandom and clustered and influences the fate of lymphopoiesis in SCID-X1 gene therapy. J Clin Invest 117: 2225-2232.
    • (2007) J Clin Invest , vol.117 , pp. 2225-2232
    • Deichmann, A.1    Hacein-Bey-Abina, S.2    Schmidt, M.3    Garrigue, A.4    Brugman, M.H.5    Hu, J.6
  • 7
    • 51349158298 scopus 로고    scopus 로고
    • Insertional mutagenesis combined with acquired somatic mutations causes leukemogenesis following gene therapy of SCID-X1 patients
    • Howe, SJ, Mansour, MR, Schwarzwaelder, K, Bartholomae, C, Hubank, M, Kempski, H et al. (2008). Insertional mutagenesis combined with acquired somatic mutations causes leukemogenesis following gene therapy of SCID-X1 patients. J Clin Invest 118: 3143-3150.
    • (2008) J Clin Invest , vol.118 , pp. 3143-3150
    • Howe, S.J.1    Mansour, M.R.2    Schwarzwaelder, K.3    Bartholomae, C.4    Hubank, M.5    Kempski, H.6
  • 10
    • 33745108790 scopus 로고    scopus 로고
    • Hematopoietic stem cell gene transfer in a tumor-prone mouse model uncovers low genotoxicity of lentiviral vector integration
    • Montini, E, Cesana, D, Schmidt, M, Sanvito, F, Ponzoni, M, Bartholomae, C et al. (2006). Hematopoietic stem cell gene transfer in a tumor-prone mouse model uncovers low genotoxicity of lentiviral vector integration. Nat Biotechnol 24: 687-696.
    • (2006) Nat Biotechnol , vol.24 , pp. 687-696
    • Montini, E.1    Cesana, D.2    Schmidt, M.3    Sanvito, F.4    Ponzoni, M.5    Bartholomae, C.6
  • 11
    • 0037162715 scopus 로고    scopus 로고
    • HIV-1 integration in the human genome favors active genes and local hotspots
    • Schroder, AR, Shinn, P, Chen, H, Berry, C, Ecker, JR and Bushman, F (2002). HIV-1 integration in the human genome favors active genes and local hotspots. Cell 110: 521-529.
    • (2002) Cell , vol.110 , pp. 521-529
    • Schroder, A.R.1    Shinn, P.2    Chen, H.3    Berry, C.4    Ecker, J.R.5    Bushman, F.6
  • 13
    • 33745363486 scopus 로고    scopus 로고
    • HIV integration site selection: Targeting in macrophages and the effects of different routes of viral entry
    • Barr, SD, Ciuffi, A, Leipzig, J, Shinn, P, Ecker, JR and Bushman, FD (2006). HIV integration site selection: Targeting in macrophages and the effects of different routes of viral entry. Mol Ther 14: 218-225.
    • (2006) Mol Ther , vol.14 , pp. 218-225
    • Barr, S.D.1    Ciuffi, A.2    Leipzig, J.3    Shinn, P.4    Ecker, J.R.5    Bushman, F.D.6
  • 14
    • 33751418954 scopus 로고    scopus 로고
    • Selection of target sites for mobile DNA integration in the human genome
    • Berry, C, Hannenhalli, S, Leipzig, J and Bushman, FD (2006). Selection of target sites for mobile DNA integration in the human genome. PLoS Comput Biol 2: E157.
    • (2006) PLoS Comput Biol , vol.2
    • Berry, C.1    Hannenhalli, S.2    Leipzig, J.3    Bushman, F.D.4
  • 15
    • 0037841763 scopus 로고    scopus 로고
    • Transcription start regions in the human genome are favored targets for MLV integration
    • Wu, X, Li, Y, Crise, B and Burgess, SM (2003). Transcription start regions in the human genome are favored targets for MLV integration. Science 300: 1749-1751.
    • (2003) Science , vol.300 , pp. 1749-1751
    • Wu, X.1    Li, Y.2    Crise, B.3    Burgess, S.M.4
  • 16
    • 15244346492 scopus 로고    scopus 로고
    • Promoter trapping reveals significant differences in integration site selection between MLV and HIV vectors in primary hematopoetic cells
    • De Palma, M, Montini, E, Santoni de Sio, FR, Benedicenti, F, Gentile, A, Medico, E et al. (2005). Promoter trapping reveals significant differences in integration site selection between MLV and HIV vectors in primary hematopoetic cells. Blood 105: 2307-2315.
    • (2005) Blood , vol.105 , pp. 2307-2315
    • De Palma, M.1    Montini, E.2    Santoni de Sio, F.R.3    Benedicenti, F.4    Gentile, A.5    Medico, E.6
  • 18
    • 34547635063 scopus 로고    scopus 로고
    • HIV integration site selection: Analysis by massively parallel pyrosequencing reveals association with epigenetic modifications
    • Wang, GP, Ciuffi, A, Leipzig, J, Berry, CC and Bushman, FD (2007). HIV integration site selection: Analysis by massively parallel pyrosequencing reveals association with epigenetic modifications. Genome Res 17: 1186-1194.
    • (2007) Genome Res , vol.17 , pp. 1186-1194
    • Wang, G.P.1    Ciuffi, A.2    Leipzig, J.3    Berry, C.C.4    Bushman, F.D.5
  • 19
    • 44349158394 scopus 로고    scopus 로고
    • DNA bar coding and pyrosequencing to analyze adverse events in therapeutic gene transfer
    • Wang, GP, Garrigue, A, Ciuffi, A, Ronen, K, Leipzig, J, Berry, C et al. (2008). DNA bar coding and pyrosequencing to analyze adverse events in therapeutic gene transfer. Nucleic Acids Res 36: e49.
    • (2008) Nucleic Acids Res , vol.36
    • Wang, G.P.1    Garrigue, A.2    Ciuffi, A.3    Ronen, K.4    Leipzig, J.5    Berry, C.6
  • 20
    • 2942639506 scopus 로고    scopus 로고
    • Antisense-mediated inhibition of human immunodeficiency virus (HIV) replication by use of an HIV type 1-based vector results in severely attenuated mutants incapable of developing resistance
    • Lu, X, Yu, Q, Binder, GK, Chen, Z, Slepushkina, T, Rossi, J et al. (2004). Antisense-mediated inhibition of human immunodeficiency virus (HIV) replication by use of an HIV type 1-based vector results in severely attenuated mutants incapable of developing resistance. J Virol 78: 7079-7088.
    • (2004) J Virol , vol.78 , pp. 7079-7088
    • Lu, X.1    Yu, Q.2    Binder, G.K.3    Chen, Z.4    Slepushkina, T.5    Rossi, J.6
  • 21
    • 33645734405 scopus 로고    scopus 로고
    • Correction of X-linked chronic granulomatous disease by gene therapy, augmented by insertional activation of MDS1-EVI1, PRDM16 or SETBP1
    • Ott, MG, Schmidt, M, Schwarzwaelder, K, Stein, S, Siler, U, Koehl, U et al. (2006). Correction of X-linked chronic granulomatous disease by gene therapy, augmented by insertional activation of MDS1-EVI1, PRDM16 or SETBP1. Nat Med 12: 401-409.
    • (2006) Nat Med , vol.12 , pp. 401-409
    • Ott, M.G.1    Schmidt, M.2    Schwarzwaelder, K.3    Stein, S.4    Siler, U.5    Koehl, U.6
  • 22
  • 25
    • 34547834963 scopus 로고    scopus 로고
    • The use of coded PCR primers enables high-throughput sequencing of multiple homolog amplification products by 454 parallel sequencing
    • Binladen, J, Gilbert, MT, Bollback, JP, Panitz, F, Bendixen, C, Nielsen, R et al. (2007). The use of coded PCR primers enables high-throughput sequencing of multiple homolog amplification products by 454 parallel sequencing. PLoS ONE 2: E197.
    • (2007) PLoS ONE , vol.2
    • Binladen, J.1    Gilbert, M.T.2    Bollback, J.P.3    Panitz, F.4    Bendixen, C.5    Nielsen, R.6
  • 26
    • 40149103278 scopus 로고    scopus 로고
    • Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex
    • Hamady, M, Walker, JJ, Harris, JK, Gold, NJ and Knight, R (2008). Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex. Nat Methods 5: 235-237.
    • (2008) Nat Methods , vol.5 , pp. 235-237
    • Hamady, M.1    Walker, J.J.2    Harris, J.K.3    Gold, N.J.4    Knight, R.5
  • 27
    • 0029838374 scopus 로고    scopus 로고
    • Sequence analysis of the human DNA flanking sites of human immunodeficiency virus type 1 integration
    • Stevens, SW and Griffith, JD (1996). Sequence analysis of the human DNA flanking sites of human immunodeficiency virus type 1 integration. J Virol 70: 6459-6462.
    • (1996) J Virol , vol.70 , pp. 6459-6462
    • Stevens, S.W.1    Griffith, J.D.2
  • 28
    • 0031957564 scopus 로고    scopus 로고
    • Chromosome structure and HIV-1 cDNA integration: Centromeric alphoid repeats are a disfavored target
    • Carteau, S, Hoffmann, C and Bushman, FD (1998). Chromosome structure and HIV-1 cDNA integration: Centromeric alphoid repeats are a disfavored target. J Virol 72: 4005-4014.
    • (1998) J Virol , vol.72 , pp. 4005-4014
    • Carteau, S.1    Hoffmann, C.2    Bushman, F.D.3
  • 29
    • 17844381584 scopus 로고    scopus 로고
    • Symmetrical base preferences surrounding HIV-1, avian sarcoma/leukosis virus, and murine leukemia virus integration sites
    • Holman, AG and Coffin, JM (2005). Symmetrical base preferences surrounding HIV-1, avian sarcoma/leukosis virus, and murine leukemia virus integration sites. Proc Natl Acad Sci USA 102: 6103-6107.
    • (2005) Proc Natl Acad Sci USA , vol.102 , pp. 6103-6107
    • Holman, A.G.1    Coffin, J.M.2
  • 30
    • 16244386233 scopus 로고    scopus 로고
    • Weak palindromic consensus sequences are a common feature found at the integration target sites of many retroviruses
    • Wu, X, Li, Y, Crise, B, Burgess, SM and Munroe, DJ (2005). Weak palindromic consensus sequences are a common feature found at the integration target sites of many retroviruses. J Virol 79: 5211-5214.
    • (2005) J Virol , vol.79 , pp. 5211-5214
    • Wu, X.1    Li, Y.2    Crise, B.3    Burgess, S.M.4    Munroe, D.J.5
  • 31
    • 30344434648 scopus 로고    scopus 로고
    • Integration site selection by HIV-based vectors in dividing and growth-arrested IMR-90 lung fibroblasts
    • Ciuffi, A, Mitchell, RS, Hoffmann, C, Leipzig, J, Shinn, P, Ecker, JR et al. (2006). Integration site selection by HIV-based vectors in dividing and growth-arrested IMR-90 lung fibroblasts. Mol Ther 13: 366-373.
    • (2006) Mol Ther , vol.13 , pp. 366-373
    • Ciuffi, A.1    Mitchell, R.S.2    Hoffmann, C.3    Leipzig, J.4    Shinn, P.5    Ecker, J.R.6
  • 32
    • 34249026300 scopus 로고    scopus 로고
    • High-resolution profiling of histone methylations in the human genome
    • Barski, A, Cuddapah, S, Cui, K, Roh, TY, Schones, DE, Wang, Z et al. (2007). High-resolution profiling of histone methylations in the human genome. Cell 129: 823-837.
    • (2007) Cell , vol.129 , pp. 823-837
    • Barski, A.1    Cuddapah, S.2    Cui, K.3    Roh, T.Y.4    Schones, D.E.5    Wang, Z.6
  • 33
    • 0026696624 scopus 로고
    • Nucleosomes, DNA-binding proteins, and DNA sequence modulate retroviral integration target site selection
    • Pryciak, PM and Varmus, HE (1992). Nucleosomes, DNA-binding proteins, and DNA sequence modulate retroviral integration target site selection. Cell 69: 769-780.
    • (1992) Cell , vol.69 , pp. 769-780
    • Pryciak, P.M.1    Varmus, H.E.2
  • 34
    • 0026567862 scopus 로고
    • Retroviral integration into minichromosomes in vitro
    • Pryciak, PM, Sil, A and Varmus, HE (1992). Retroviral integration into minichromosomes in vitro. EMBO J 11: 291-303.
    • (1992) EMBO J , vol.11 , pp. 291-303
    • Pryciak, P.M.1    Sil, A.2    Varmus, H.E.3
  • 35
    • 0026713302 scopus 로고
    • Simian virus 40 minichromosomes as targets for retroviral integration in vivo
    • Pryciak, PM, Müller, HP and Varmus, HE (1992). Simian virus 40 minichromosomes as targets for retroviral integration in vivo. Proc Natl Acad Sci USA 89: 9237-9241.
    • (1992) Proc Natl Acad Sci USA , vol.89 , pp. 9237-9241
    • Pryciak, P.M.1    Müller, H.P.2    Varmus, H.E.3
  • 36
    • 0028264042 scopus 로고
    • Human immunodeficiency virus integrase directs integration to sites of severe DNA distortion within the nucleosome core
    • Pruss, D, Bushman, FD and Wolffe, AP (1994). Human immunodeficiency virus integrase directs integration to sites of severe DNA distortion within the nucleosome core. Proc Natl Acad Sci USA 91: 5913-5917.
    • (1994) Proc Natl Acad Sci USA , vol.91 , pp. 5913-5917
    • Pruss, D.1    Bushman, F.D.2    Wolffe, A.P.3
  • 37
    • 0028125005 scopus 로고
    • The influence of DNA and nucleosome structure on integration events directed by HIV integrase
    • Pruss, D, Reeves, R, Bushman, FD and Wolffe, AP (1994). The influence of DNA and nucleosome structure on integration events directed by HIV integrase. J Biol Chem 269: 25031-25041.
    • (1994) J Biol Chem , vol.269 , pp. 25031-25041
    • Pruss, D.1    Reeves, R.2    Bushman, F.D.3    Wolffe, A.P.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.