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Volumn 106, Issue 13, 2009, Pages 5288-5293

H3 trimethyl K9 and H3 acetyl K9 chromatin modifications are associated with class switch recombination

Author keywords

Activation induced cytoside deaminase; B cells; ChIP; Immunoglobulin

Indexed keywords

ACETIC ACID DERIVATIVE; ALKYL GROUP; HISTONE; TRIMETHYL DERIVATIVE; UNCLASSIFIED DRUG;

EID: 65249129851     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.0901368106     Document Type: Article
Times cited : (51)

References (40)
  • 1
    • 0034268780 scopus 로고    scopus 로고
    • Classswitch recombination and hypermutation require activationinduced cytidine deaminase (AID), a potential RNA editing enzyme
    • Muramatsu M, et al. (2000) Classswitch recombination and hypermutation require activationinduced cytidine deaminase (AID), a potential RNA editing enzyme. Cell 102:553-563.
    • (2000) Cell , vol.102 , pp. 553-563
    • Muramatsu, M.1
  • 2
    • 42649124572 scopus 로고    scopus 로고
    • The biochemistry of somatic hypermutation
    • Peled JU, et al. (2008) The biochemistry of somatic hypermutation. Annu Rev Immunol 26:481-511.
    • (2008) Annu Rev Immunol , vol.26 , pp. 481-511
    • Peled, J.U.1
  • 3
    • 42649123314 scopus 로고    scopus 로고
    • Mechanism and regulation of class switch recombination
    • Stavnezer J, Guikema JE, Schrader CE (2008) Mechanism and regulation of class switch recombination. Annu Rev Immunol 26:261-292.
    • (2008) Annu Rev Immunol , vol.26 , pp. 261-292
    • Stavnezer, J.1    Guikema, J.E.2    Schrader, C.E.3
  • 4
    • 2442586542 scopus 로고    scopus 로고
    • DNA acrobats of the Ig class switch
    • Wang CL, Wabl M (2004) DNA acrobats of the Ig class switch. J Immunol 172:5815-5821.
    • (2004) J Immunol , vol.172 , pp. 5815-5821
    • Wang, C.L.1    Wabl, M.2
  • 6
    • 0346362489 scopus 로고    scopus 로고
    • Transcription-coupled events associating with immunoglobulin switch region chromatin
    • Nambu Y, et al. (2003) Transcription-coupled events associating with immunoglobulin switch region chromatin. Science 302:2137-2140.
    • (2003) Science , vol.302 , pp. 2137-2140
    • Nambu, Y.1
  • 7
    • 0037452080 scopus 로고    scopus 로고
    • Transcription-targeted DNA deamination by the AID antibody diversification enzyme
    • Chaudhuri J, et al. (2003) Transcription-targeted DNA deamination by the AID antibody diversification enzyme. Nature 422:726-730.
    • (2003) Nature , vol.422 , pp. 726-730
    • Chaudhuri, J.1
  • 8
    • 33847076849 scopus 로고    scopus 로고
    • Chromatin modifications and their function
    • Kouzarides T(2007) Chromatin modifications and their function. Cell 128:693-705.
    • (2007) Cell , vol.128 , pp. 693-705
    • Kouzarides, T.1
  • 9
    • 35848936709 scopus 로고    scopus 로고
    • Cross-regulation of histone modifications
    • Latham JA, Dent SY (2007) Cross-regulation of histone modifications. Nat Struct Mol Biol 14:1017-1024.
    • (2007) Nat Struct Mol Biol , vol.14 , pp. 1017-1024
    • Latham, J.A.1    Dent, S.Y.2
  • 10
    • 33747849302 scopus 로고    scopus 로고
    • Cobb RM, Oestreich KJ, Osipovich OA, Oltz EM (2006) Accessibility control of V(D) J recombination. Adv Immunol 91:45-109.
    • Cobb RM, Oestreich KJ, Osipovich OA, Oltz EM (2006) Accessibility control of V(D) J recombination. Adv Immunol 91:45-109.
  • 11
    • 35349024178 scopus 로고    scopus 로고
    • A plant homeodomain in RAG-2 that binds hypermethylated lysine 4 of histone H3 is necessary for efficient antigen receptor gene rearrangement
    • Liu Y, Subrahmanyam R, Chakraborty T, Sen R, Desiderio S (2007) A plant homeodomain in RAG-2 that binds hypermethylated lysine 4 of histone H3 is necessary for efficient antigen receptor gene rearrangement. Immunity 27:561-571.
    • (2007) Immunity , vol.27 , pp. 561-571
    • Liu, Y.1    Subrahmanyam, R.2    Chakraborty, T.3    Sen, R.4    Desiderio, S.5
  • 12
    • 37249041657 scopus 로고    scopus 로고
    • Matthews AG, et al. (2007) RAG2 PHD finger couples histone H3 lysine 4 trimethylation with V(D) J recombination. Nature 450:1106-1110.
    • Matthews AG, et al. (2007) RAG2 PHD finger couples histone H3 lysine 4 trimethylation with V(D) J recombination. Nature 450:1106-1110.
  • 13
    • 7444234734 scopus 로고    scopus 로고
    • Differential regulation of histone acetylation and generation of mutations in switch regions is associated with Ig class switching
    • Li Z, Luo Z, Scharff MD (2004) Differential regulation of histone acetylation and generation of mutations in switch regions is associated with Ig class switching. Proc Natl Acad Sci USA 101:15428-15433.
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 15428-15433
    • Li, Z.1    Luo, Z.2    Scharff, M.D.3
  • 14
    • 31344445404 scopus 로고    scopus 로고
    • AID-dependent histone acetylation is detected in immunoglobulin S regions
    • Wang L, Whang N, Wuerffel R, Kenter AL (2006) AID-dependent histone acetylation is detected in immunoglobulin S regions. J Exp Med 203:215-226.
    • (2006) J Exp Med , vol.203 , pp. 215-226
    • Wang, L.1    Whang, N.2    Wuerffel, R.3    Kenter, A.L.4
  • 15
    • 0035818990 scopus 로고    scopus 로고
    • AID is required to initiate Nbs1/γ-H2AX focus formation and mutations at sites of class switching
    • Petersen S, et al. (2001) AID is required to initiate Nbs1/γ-H2AX focus formation and mutations at sites of class switching. Nature 414:660-665.
    • (2001) Nature , vol.414 , pp. 660-665
    • Petersen, S.1
  • 17
    • 36148940618 scopus 로고    scopus 로고
    • S-S synapsis during class switch recombination is promoted by distantly located transcriptional elements and activation-induced deaminase
    • Wuerffel R, et al. (2007) S-S synapsis during class switch recombination is promoted by distantly located transcriptional elements and activation-induced deaminase. Immunity 27:711-722.
    • (2007) Immunity , vol.27 , pp. 711-722
    • Wuerffel, R.1
  • 18
    • 0021685705 scopus 로고
    • Clonal analysis of B cells induced to secrete IgG by T cell-derived lymphokine(s)
    • Layton JE, Vitetta ES, Uhr JW, Krammer PH (1984) Clonal analysis of B cells induced to secrete IgG by T cell-derived lymphokine(s). J Exp Med 160:1850-1863.
    • (1984) J Exp Med , vol.160 , pp. 1850-1863
    • Layton, J.E.1    Vitetta, E.S.2    Uhr, J.W.3    Krammer, P.H.4
  • 19
    • 0027169028 scopus 로고
    • DNA rearrangement can account for in vitro switching to lgG1
    • ChuCC, Max EE, Paul WE (1993) DNA rearrangement can account for in vitro switching to lgG1. J Exp Med 178:1381-1390.
    • (1993) J Exp Med , vol.178 , pp. 1381-1390
    • Chu, C.C.1    Max, E.E.2    Paul, W.E.3
  • 20
    • 55849092898 scopus 로고    scopus 로고
    • Ubiquitylated PCNA plays a role in somatic hypermutation and class switch recombination and is required for meiotic progression
    • Roa S, et al. (2008) Ubiquitylated PCNA plays a role in somatic hypermutation and class switch recombination and is required for meiotic progression. Proc Natl Acad Sci USA 105:16248-16253.
    • (2008) Proc Natl Acad Sci USA , vol.105 , pp. 16248-16253
    • Roa, S.1
  • 21
    • 0023889066 scopus 로고
    • Mitogen- and IL4-regulated expression of germ-line Ig7gamma;2b transcripts: Evidence for directed heavy chain class switching
    • Lutzker S, Rothman P, Pollock R, Coffman R, Alt FW (1988) Mitogen- and IL4-regulated expression of germ-line Ig7gamma;2b transcripts: Evidence for directed heavy chain class switching. Cell 53:177-184.
    • (1988) Cell , vol.53 , pp. 177-184
    • Lutzker, S.1    Rothman, P.2    Pollock, R.3    Coffman, R.4    Alt, F.W.5
  • 22
    • 0037128169 scopus 로고    scopus 로고
    • μ region: Implication of AID involvement in a common step of class switch recombination and somatic hypermutation
    • μ region: Implication of AID involvement in a common step of class switch recombination and somatic hypermutation. J Exp Med 195:529-534.
    • (2002) J Exp Med , vol.195 , pp. 529-534
    • Nagaoka, H.1    Muramatsu, M.2    Yamamura, N.3    Kinoshita, K.4    Honjo, T.5
  • 23
    • 0242473148 scopus 로고    scopus 로고
    • γ regions prior to class switch recombination
    • γ regions prior to class switch recombination. EMBO J 22:5893-5903.
    • (2003) EMBO J , vol.22 , pp. 5893-5903
    • Schrader, C.E.1
  • 26
    • 0041474757 scopus 로고    scopus 로고
    • Germ-line transcription occurs on both the functional and the nonfunctional alleles of immunoglobulin constant heavy chain genes
    • Delpy L, Le Bert M, Cogne M, Khamlichi AA(2003) Germ-line transcription occurs on both the functional and the nonfunctional alleles of immunoglobulin constant heavy chain genes, Eur J Immunol 33:2108-2113.
    • (2003) Eur J Immunol , vol.33 , pp. 2108-2113
    • Delpy, L.1    Le Bert, M.2    Cogne, M.3    Khamlichi, A.A.4
  • 27
    • 0345671747 scopus 로고
    • Class switch recombination is IgG 1-specific on active and inactive IgH loci of lgG1-secreting B cell blasts
    • Radbruch A, Muller W, Rajewsky K (1986) Class switch recombination is IgG 1-specific on active and inactive IgH loci of lgG1-secreting B cell blasts. Proc Natl Acad Sci USA 83:3954-3957.
    • (1986) Proc Natl Acad Sci USA , vol.83 , pp. 3954-3957
    • Radbruch, A.1    Muller, W.2    Rajewsky, K.3
  • 28
    • 0037162518 scopus 로고    scopus 로고
    • Internal IgH class switch region deletions are positionindependent and enhanced by AID expression
    • Dudley DD, et al. (2002) Internal IgH class switch region deletions are positionindependent and enhanced by AID expression. Proc Natl Acad Sci USA 99:9984-9989.
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 9984-9989
    • Dudley, D.D.1
  • 30
    • 42049085369 scopus 로고    scopus 로고
    • Differentially expressed genesare marked by histone 3 lysine 9 trimethylation in human cancer cells
    • Wiencke JK, Zheng S, Morrison Z, Yeh RF (2008) Differentially expressed genesare marked by histone 3 lysine 9 trimethylation in human cancer cells. Oncogene 27:2412-2421.
    • (2008) Oncogene , vol.27 , pp. 2412-2421
    • Wiencke, J.K.1    Zheng, S.2    Morrison, Z.3    Yeh, R.F.4
  • 31
    • 57349114640 scopus 로고    scopus 로고
    • Analysisof intergenictranscription and histone modification across the human immunoglobulin heavy-chain locus
    • Chowdhury M, et al. (2008) Analysisof intergenictranscription and histone modification across the human immunoglobulin heavy-chain locus. Proc Natl Acad Sci USA 105:15872-15877.
    • (2008) Proc Natl Acad Sci USA , vol.105 , pp. 15872-15877
    • Chowdhury, M.1
  • 32
    • 34147177521 scopus 로고    scopus 로고
    • Organismal differences in post-translational modifications in histones H3 and H4
    • Garcia BA, et al. (2007) Organismal differences in post-translational modifications in histones H3 and H4. J Biol Chem 282:7641-7655.
    • (2007) J Biol Chem , vol.282 , pp. 7641-7655
    • Garcia, B.A.1
  • 33
    • 46249112085 scopus 로고    scopus 로고
    • Combinatorial patterns of histone acetylations and methylations in the human genome
    • Wang Z, et al. (2008) Combinatorial patterns of histone acetylations and methylations in the human genome. Nat Genet 40:897-903.
    • (2008) Nat Genet , vol.40 , pp. 897-903
    • Wang, Z.1
  • 34
    • 0041381361 scopus 로고    scopus 로고
    • AID mutant analyses indicate requirement for class switch-specific cofactors
    • Ta VT, et al. (2003) AID mutant analyses indicate requirement for class switch-specific cofactors. Nat Immunol 4:843-848.
    • (2003) Nat Immunol , vol.4 , pp. 843-848
    • Ta, V.T.1
  • 35
    • 17944380227 scopus 로고    scopus 로고
    • Loss of the Suv39h histone methyltransf erases impairs mammalian heterochromatin and genome stability
    • Peters AH, et al. (2001) Loss of the Suv39h histone methyltransf erases impairs mammalian heterochromatin and genome stability. Cell 107:323-337.
    • (2001) Cell , vol.107 , pp. 323-337
    • Peters, A.H.1
  • 36
    • 33745829068 scopus 로고    scopus 로고
    • The histone methyltransferase Suv39h1 increases class switch recombination specifically to IgA
    • Bradley SP, Kaminski DA, Peters AH, Jenuwein T, Stavnezer J (2006) The histone methyltransferase Suv39h1 increases class switch recombination specifically to IgA. J Immunol 177:1179-1188.
    • (2006) J Immunol , vol.177 , pp. 1179-1188
    • Bradley, S.P.1    Kaminski, D.A.2    Peters, A.H.3    Jenuwein, T.4    Stavnezer, J.5
  • 37
    • 0037099413 scopus 로고    scopus 로고
    • G9a histone methyltransf erase plays a dominant role in euchromatic histone H3 lysine 9 methylation and is essential for early embryogenesis
    • Tachibana M, et al. (2002) G9a histone methyltransf erase plays a dominant role in euchromatic histone H3 lysine 9 methylation and is essential for early embryogenesis. Genes Dev 1/16:1779-1791.
    • (2002) Genes Dev , vol.1 , Issue.16 , pp. 1779-1791
    • Tachibana, M.1
  • 38
    • 47949091985 scopus 로고    scopus 로고
    • Functional analysis of histone methyltransf erase g9a in B and T lymphocytes
    • Thomas LR, et al. (2008) Functional analysis of histone methyltransf erase g9a in B and T lymphocytes. J Immunol 181:485-493.
    • (2008) J Immunol , vol.181 , pp. 485-493
    • Thomas, L.R.1
  • 39
    • 35349006314 scopus 로고    scopus 로고
    • Histone lysine demethylases: Emerging roles in development, physiology and disease
    • Shi Y(2007) Histone lysine demethylases: Emerging roles in development, physiology and disease. Nat Rev Genet 8:829-833.
    • (2007) Nat Rev Genet , vol.8 , pp. 829-833
    • Shi, Y.1
  • 40
    • 39749093046 scopus 로고    scopus 로고
    • Analysis of protein cooccupancy by quantitative sequential chromatin immunoprecipitation
    • Wiley, New York
    • Geisberg JV Struhl K (2005) Analysis of protein cooccupancy by quantitative sequential chromatin immunoprecipitation. Current Protocols in Molecular Biology (Wiley, New York).
    • (2005) Current Protocols in Molecular Biology
    • Geisberg, J.V.1    Struhl, K.2


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