Membranes and transport proteins of thermophilic microorganisms

Thermophiles: Biology and Technology at High Temperatures

Volumn , Issue , 2007, Pages 39-54

  Albers, Sonja Verena ^a   Driessen, Arnold J M ^a  

^a UNIVERSITY OF GRONINGEN   (Netherlands)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 58149275149     PISSN: None     EISSN: None     Source Type: Book    
DOI: None     Document Type: Chapter

References (80)

1. Melchior, D. L. 1982. Lipid phase transitions and regulation of membrane fluidity in prokaryotes. Curr. Top. Membr. Transp. 17:263-316.
2. Kates, M. 1996. Structural analysis of phospholipids and glycolipids in extremely halophilic archaebacteria. J. Microbiol. Meth. 25:113-128.
3. Kates, M., N. Moldoveanu, and L. C. Stewart. 1993. On the revised structure of the major phospholipid of Halobacterium salinarium. Biochim. Biophys. Acta 1169:46-53.
4. Upasani, V. N., S. G. Desai, N. Moldoveanu, and M. Kates. 1994. Lipids of extremely halophilic archaeobacteria from saline environments in India: a novel glycolipid in Natronobacterium strains. Microbiology 140:1959-1966.
5. De Rosa, M., A. Trincone, B. Nicolaus, and A. Gambacorta. 1991. Archaebacteria: lipids, membrane structures, and adaptations to environmental stresses. In G. di Prisco (ed.), Life under extreme conditions. Springer-Verlag, Berlin Heidelberg, pp. 61-87.
6. Elferink, M. G. L., J. G. De Wit, R. Demel, A. J. M. Driessen, and W. N. Konings. 1992. Functional reconstitution of membrane proteins in monolayer liposomes from bipolar lipids of Sulfolobus acidocaldarius. J. Biol. Chem. 267:1375-1381.
7. Langworthy, T. A. 1982. Lipids of Thermoplasma. Methods Enzymol. 88:369-406.
8. De Rosa, M. and A. Gambacorta. 1988. The lipids of archaebacteria. Prog. Lipid Res. 27:153-175.
9. Sprott, G. D., M. Meloche, and J. C. Richards. 1991. Proportions of diether, macrocyclic diether, and tetraether lipids in Methanococcus jannaschii grown at different temperatures. J. Bacteriol. 173:3907-3910.
10. Hamill, O. P. and B. Martinac. 2001. Molecular basis of mechanotransduction in living cells. Physiol. Rev. 81:685-740.
11. Kloda, A. and B. Martinac. 2001. Molecular identification of a mechanosensitive channel in archaea. Biophys. J. 80:229-240.
12. Le Dain, A. C., N. Saint, A. Kloda, A. Ghazi, and B. Martinac. 1998. Mechanosensitive ion channels of the archaeon Haloferax volcanii. J. Biol. Chem. 273:12116-12119.
13. Kloda, A. and B. Martinac. 2001. Mechanosensitive channel of Thermoplasma, the cell wall-less archaea: cloning and molecular characterization. Cell Biochem. Biophys. 34:321-347.
14. Kloda, A. and B. Martinac. 2001. Structural and functional differences between two homologous mechanosensitive channels of Methanococcus jannaschii. EMBO J. 20:1888-1896.
15. Martinac, B. 2004. Mechanosensitive ion channels: molecules of mechanotransduction. J. Cell Sci. 117:2449-2460.
16. Jiang, Y., A. Lee, J. Chen, M. Cadene, B. T. Chait, and R. MacKinnon. 2002. Crystal structure and mechanism of a calcium-gated potassium channel. Nature 417:515-522.
17. + channel. Nature 423:33-41.
18. + channel. Nature 422:180-185.
19. + channel. Nature 423:42-48.
20. Chanda, B., O. Kwame Asamoah, R. Blunck, B. Roux, and F. Bezanilla. 2005. Gating charge displacement in voltage-gated ion channels involves limited transmembrane movement. Nature 436:852-856.
21. Revell Phillips, L., M. Milescu, Y. Li-Smerin, J. A. Mindell, J. I. Kim, and K. J. Swartz. 2005. Voltagesensor activation with a tarantula toxin as cargo. Nature 436:857-860.
22. Eshaghi, S., D. Niegowski, A. Kohl, M. D. Martinez, S. A. Lesley, and P. Nordlund. 2006. Crystal structure of a divalent metal ion transporter CorA at 2.9 angstrom resolution. Science 313:354-357.
23. 2+ transporter. Nature 440:833-837.
24. 2+ homeostasis and the CorA translocation cycle. EMBO J. 25:3762-3773.
25. Bartolucci, S., M. Rossi, and R. Cannio. 2003. Characterization and functional complementation of a nonlethal deletion in the chromosome of a beta-glycosidase mutant of Sulfolobus solfataricus. J. Bacteriol. 185:3948-3957.
26. Prisco, A., M. Moracci, M. Rossi, and M. Ciaramella. 1995. A gene encoding a putative membrane protein homologous to the major facilitator superfamily of transporters maps upstream of the β-glycosidase gene in the Archaeon Sulfolobus solfataricus. J. Bacteriol. 177:1614-1619.
27. Proctor, L. M., R. Lai, and R. P. Gunsalus. 1997. The methanogenic archaeon Methanosarcina thermophila TM-1 possesses a high-affinity glycine betaine transporter involved in osmotic adaptation. Appl. Environ. Microbiol. 63:2252-2257.
28. Lai, M. C., T. Y. Hong, and R. P. Gunsalus. 2000. Glycine betaine transport in the obligate halophilic archaeon Methanohalophilus portucalensis. J. Bacteriol. 182:5020-5024.
29. Yernool, D., O. Boudker, Y. Jin, and E. Gouaux. 2004. Structure of a glutamate transporter homologue from Pyrococcus horikoshii. Nature 431:811-818.
30. Raunser, S., M. Appel, C. Ganea, U. Geldmacher-Kaufer, K. Fendler, and W. Kuhlbrandt. 2006. Structure and function of prokaryotic glutamate transporters from Escherichia coli and Pyrococcus horikoshii. Biochemistry 45:12796-12805.
31. Boudker, O., R. M. Ryan, D. Yernool, K. Shimamoto, and E. Gouaux. 2007. Coupling substrate and ion binding to extracellular gate of a sodium-dependent aspartate transporter. Nature 445:387-393.
32. Dassa, E. and M. Hofnung. 1985. Sequence of gene malG in E. coli K12: homologies between integral membrane components from binding protein-dependent transport systems. EMBO J. 4:2287-2293.
33. Schneider, E. 2001. ABC transporters catalyzing carbohydrate uptake. Res. Microbiol. 152:303-310.
34. Koning, S. M., M. G. Elferink, W. N. Konings, and A. J. M. Driessen. 2001. Cellobiose uptake in the hyperthermophilic archaeon Pyrococcus furiosus is mediated by an inducible, high-affinity ABC transporter. J. Bacteriol. 183:4979-4984.
35. Elferink, M. G. L., S.-V. Albers, W. N. Konings, and A. J. M. Driessen. 2001. Sugar transport in Sulfolobus solfataricus is mediated by two families of binding protein-dependent ABC transporters. Mol. Microbiol. 39:1494-1503.
36. Nelson, K. E., R. A. Clayton, S. R. Gill, M. L. Gwinn, R. J. Dodson, D. H. Haft, E. K. Hickey, J. D. Peterson, W. C. Nelson, K. A. Ketchum, L. McDonald, T. R. Utterback, J. A. Malek, K. D. Linher, M. M. Garrett, A. M. Stewart, M. D. Cotton, M. S. Pratt, C. A. Phillips, D. Richardson, J. Heidelberg, G. G. Sutton, R. D. Fleischmann, J. A. Eisen, and C. M. Fraser. 1999. Evidence for lateral gene transfer between Archaea and bacteria from genome sequence of Thermotoga maritima. Nature 399:323-329.
37. Chhabra, S. R., K. R. Shockley, S. B. Conners, K. L. Scott, R. D. Wolfinger, and R. M. Kelly. 2003. Carbohydrate-induced differential gene expression patterns in the hyperthermophilic bacterium Thermotoga maritima. J. Biol. Chem. 278:7540-7552.
38. Nanavati, D. M., K. Thirangoon, and K. M. Noll. 2006. Several archaeal homologs of putative oligopeptide- binding proteins encoded by Thermotoga maritima bind sugars. Appl. Environ. Microbiol. 72:1336-1345.
39. Horlacher, R., K. B. Xavier, H. Santos, J. DiRuggiero, M. Kossmann, and W. Boos. 1998. Archaeal binding protein-dependent ABC transporter: molecular and biochemical analysis of the trehalose/maltose transport system of the hyperthermophilic archaeon Thermococcus litoralis. J. Bacteriol. 180:680-689.
40. Greller, G., R. Horlacher, J. DiRuggiero, and W. Boos. 1999. Molecular and biochemical analysis of MalK, the ATP-hydrolyzing subunit of the trehalose/maltose transport system of the hyperthermophilic archaeon Thermococcus litoralis. J. Biol. Chem. 274:20259-20264.
41. Diederichs, K., J. Diez, G. Greller, C. Muller, J. Breed, C. Schnell, C. Vonrhein, W. Boos, and W. Welte. 2000. Crystal structure of MalK, the ATPase subunit of the trehalose/maltose ABC transporter of the archaeon Thermococcus litoralis. EMBO J. 19:5951-5961.
42. Diez, J., K. Diederichs, G. Greller, R. Horlacher, W. Boos, and W. Welte. 2001. The Crystal Structure of a Liganded Trehalose/Maltose-binding Protein from the Hyperthermophilic Archaeon Thermococcus litoralis at 1.85 Å. J. Mol. Biol. 305:905-915.
43. Greller, G., R. Riek, and W. Boos. 2001. Purification and characterization of the heterologously expressed trehalose/maltose ABC transporter complex of the hyperthermophilic archaeon Thermococcus litoralis. Eur. J. Biochem. 268:4011-4018.
44. Reich-Slotky, R., C. Panagiotidis, M. Reyes, and H. A. Shuman. 2000. The detergent-soluble maltose transporter is activated by maltose binding protein and verapamil. J. Bacteriol. 182:993-1000.
45. Quiocho, F. A. and P. S. Ledvina. 1996. Atomic structure and specificity of bacterial periplasmic receptors for active transport and chemotaxis: variation of common themes. Mol. Microbiol. 20:17-25.
46. Evdokimov, A. G., D. E. Anderson, K. M. Routzahn, and D. S. Waugh. 2001. Structural basis for oligosaccharide recognition by Pyrococcus furiosus maltodextrin-binding protein. J. Mol. Biol. 305:891-904.
47. Schiefner, A., G. Holtmann, K. Diederichs, W. Welte, and E. Bremer. 2004. Structural basis for the binding of compatible solutes by ProX from the hyperthermophilic archaeon Archaeoglobus fulgidus. J. Biol. Chem. 279:48270-48281.
48. Holtmann, G. 2004. Thesis. University of Marbug, Germany.
49. Bevers, L. E., P. L. Hagedoorn, G. C. Krijger, and W. R. Hagen. 2006. Tungsten transport protein A (WtpA) in Pyrococcus furiosus: the first member of a new class of tungstate and molybdate transporters. J. Bacteriol. 188:6498-6505.
50. Erra-Pujada, M., P. Debeire, F. Duchiron, and M. J. O’Donohue. 1999. The type II pullulanase of Thermococcus hydrothermalis: molecular characterization of the gene and expression of the catalytic domain. J. Bacteriol. 181:3284-3287.
51. Hettmann, T., C. L. Schmidt, S. Anemuller, U. Zahringer, H. Moll, A. Petersen, and G. Schafer. 1998. Cytochrome b558/566 from the archaeon Sulfolobus acidocaldarius. A novel highly glycosylated, membrane-bound b-type hemoprotein. J. Biol. Chem. 273:12032-12040.
52. Sumper, M., E. Berg, R. Mengele, and I. Strobel. 1990. Primary structure and glycosylation of the S-layer protein of Haloferax volcanii. J. Bacteriol. 172:7111-7118.
53. Koning, S. M., W. N. Konings, and A. J. M. Driessen. 2002. Biochemical evidence for the presence of two α-glucoside ABC-transport systems in the hyperthermophilic archaeon Pyroccocus furiosus. Archaea 1:19-25.
54. Konings, S. M., S.-V. Albers, W.N. Konings, and A. J. M. Driessen. 2002. Sugar Transport in (Hyper-) thermophilic Achaea. Res. Microbiol. 153: 61-67.
55. Albers, S. V., M. G. Elferink, R. L. Charlebois, C. W. Sensen, A. J. M. Driessen, and W. N. Konings. 1999. Glucose transport in the extremely thermoacidophilic Sulfolobus solfataricus involves a highaffinity membrane-integrated binding protein. J. Bacteriol. 181:4285-4291.
56. Koenig, H. 1988. Archaeobacterial cell envelopes. Can. J. Microbiol. 34:395-406.
57. Albers, S. V., S. M. Koning, W. N. Konings, and A. J. M. Driessen. 2004. Insights into ABC transport in archaea. J. Bioenerg. Biomembr. 36:5-15.
58. Mattar, S., B. Scharf, S. B. Kent, K. Rodewald, D. Oesterhelt, and M. Engelhard. 1994. The primary structure of halocyanin, an archaeal blue copper protein, predicts a lipid anchor for membrane fixation. J. Biol. Chem. 269:14939-14945.
59. Albers, S. V., W. N. Konings, and A. J. M. Driessen. 1999. A unique short signal sequence in membrane anchored proteins of Archaea. Mol. Microbiol. 31:1595-1596.
60. Thomas, N. A., S. L. Bardy, and K. F. Jarrell. 2001. The archaeal flagellum: a different kind of prokaryotic motility structure. FEMS Microbiol. Rev. 25:147-174.
61. Albers, S. V. and A. J. M. Driessen. 2005. Analysis of ATPases of putative secretion operons in the thermoacidophilic archaeon Sulfolobus solfataricus. Microbiology 151:763-773.
62. Albers, S. V., Z. Szabó, and A. J. M. Driessen. 2003. Archaeal homolog of bacterial type IV prepilin signal peptidases with broad substrate specificity. J. Bacteriol. 185:3918-3925.
63. Bardy, S. L. and K. F. Jarrell. 2002. FlaK of the archaeon Methanococcus maripaludis possesses preflagellin peptidase activity. FEMS Microbiol. Lett. 208:53-59.
64. Bardy, S. L., S. Y. Ng, D. S. Carnegie, and K. F. Jarrell. 2005. Site-directed mutagenesis analysis of amino acids critical for activity of the type I signal peptidase of the archaeon Methanococcus voltae. J. Bacteriol. 187:1188-1191.
65. Ng, S. Y. and K. F. Jarrell. 2003. Cloning and characterization of archaeal type I signal peptidase from Methanococcus voltae. J. Bacteriol. 185:5936-5942.
66. Konrad, Z. and J. Eichler. 2002. Lipid modification of proteins in Archaea: attachment of a mevalonic acid-based lipid moiety to the surface-layer glycoprotein of Haloferax volcanii follows protein translocation. Biochem. J. 366:959-964.
67. Palmieri, G., A. Casbarra, I. Fiume, G. Catara, A. Capasso, G. Marino, S. Onesti, and M. Rossi. 2006. Identification of the first archaeal oligopeptide-binding protein from the hyperthermophile Aeropyrum pernix. Extremophiles. 10:393-402.
68. Boos, W. and H. Shuman. 1998. Maltose/maltodextrin system of Escherichia coli: transport, metabolism, and regulation. Microbiol. Mol. Biol. Rev. 62:204-229.
69. Moody, J. E., L. Millen, D. Binns, J. F. Hunt, and P. J. Thomas. 2002. Cooperative, ATP-dependent association of the nucleotide binding cassettes during the catalytic cycle of ATP-binding cassette transporters. J. Biol. Chem. 277:21111-21114.
70. Yuan, Y. R., S. Blecker, O. Martsinkevich, L. Millen, P. J. Thomas, and J. F. Hunt. 2001. The crystal structure of the MJ0796 ATP-binding cassette: Implications for the structural consequences of ATP hydrolysis in the active site of an ABC-transporter. J. Biol. Chem. 276:32313-32321.
71. Verdon, G., S. V. Albers, B. W. Dijkstra, A. J. Driessen, and A. M. Thunnissen. 2003. Crystal Structures of the ATPase Subunit of the Glucose ABC Transporter from Sulfolobus solfataricus: Nucleotide-free and Nucleotide-bound Conformations. J. Mol. Biol. 330:343-358.
72. 2+-bound dimer of GlcV, an ABC-ATPase from Sulfolobus solfataricus. J. Mol. Biol. 334:255-267.
73. Chen, J., G. Lu, J. Lin, A. L. Davidson, and F. A. Quiocho. 2003. A tweezers-like motion of the ATP-binding cassette dimer in an ABC transport cycle. Mol. Cell 12:651-661.
74. Panagiotidis, C. H., W. Boos, and H. A. Shuman. 1998. The ATP-binding cassette subunit of the maltose transporter MalK antagonizes MalT, the activator of the Escherichia coli mal regulon. Mol. Microbiol. 30:535-546.
75. Lee, S. J., A. Engelmann, R. Horlacher, Q. Qu, G. Vierke, C. Hebbeln, M. Thomm, and W. Boos. 2003. TrmB, a sugar-specific transcriptional regulator of the trehalose/maltose ABC transporter from the hyperthermophilic archaeon Thermococcus litoralis. J. Biol. Chem. 278:983-990.
76. Lee, S. J., C. Moulakakis, S. M. Koning, W. Hausner, M. Thomm, and W. Boos. 2005. TrmB, a sugar sensing regulator of ABC transporter genes in Pyrococcus furiosus exhibits dual promoter specificity and is controlled by different inducers. Mol. Microbiol. 57:1797-1807.
77. Karpowich, N., O. Martsinkevich, L. Millen, Y. R. Yuan, P. L. Dai, K. MacVey, P. J. Thomas, and J. F. Hunt. 2001. Crystal structures of the MJ1267 ATP binding cassette reveal an induced-fit effect at the ATPase active site of an ABC transporter. Structure 9:571-586.
78. Ose, T., T. Fujie, M. Yao, N. Watanabe, and I. Tanaka. 2004. Crystal structure of the ATP-binding cassette of multisugar transporter from Pyrococcus horikoshii OT3. Proteins 57:635-638.
79. Andrade, S. L., A. Dickmanns, R. Ficner, and O. Einsle. 2005. Crystal structure of the archaeal ammonium transporter Amt-1 from Archaeoglobus fulgidus. Proc. Natl. Acad. Sci. U. S. A. 102:14994-14999.
80. --dependent neurotransmitter transporters. Nature 437:215-223.