Tungsten transport protein A (WtpA) in Pyrococcus furiosus: The first member of a new class of tungstate and molybdate transporters

Journal of Bacteriology

Volumn 188, Issue 18, 2006, Pages 6498-6505

  Bevers, Loes E ^a   Hagedoorn, Peter Leon ^a   Krijger, Gerard C ^a   Hagen, Wilfred R ^a  

^a DELFT UNIVERSITY OF TECHNOLOGY   (Netherlands)

Author keywords

[No Author keywords available]

Indexed keywords

ABC TRANSPORTER; BACTERIAL PROTEIN; CARRIER PROTEIN; MOLYBDIC ACID; PROTEIN MODA; PROTEIN TUPA; PROTEIN WTPA; TUNGSTEN; UNCLASSIFIED DRUG;

ARCHAEBACTERIUM; ARTICLE; BINDING AFFINITY; BINDING SITE; CONTROLLED STUDY; DISSOCIATION CONSTANT; ESCHERICHIA COLI; ISOTHERMAL TITRATION CALORIMETRY; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN ANALYSIS; PYROCOCCUS FURIOSUS; SEQUENCE HOMOLOGY; STOICHIOMETRY;

AMINO ACID SEQUENCE; ARCHAEAL PROTEINS; ATP-BINDING CASSETTE TRANSPORTERS; BACTERIAL PROTEINS; CLONING, MOLECULAR; ESCHERICHIA COLI; ESCHERICHIA COLI PROTEINS; MEMBRANE TRANSPORT PROTEINS; MOLECULAR SEQUENCE DATA; MOLYBDENUM; PERIPLASMIC BINDING PROTEINS; PERIPLASMIC PROTEINS; PHYLOGENY; PROTEIN BINDING; PYROCOCCUS FURIOSUS; SEQUENCE HOMOLOGY, AMINO ACID; SUBSTRATE SPECIFICITY; TUNGSTEN COMPOUNDS;

ARCHAEA; ESCHERICHIA COLI; PYROCOCCUS FURIOSUS;

EID: 33748777679     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/JB.00548-06     Document Type: Article

References (39)

1. Albers, S.-V., and A. J. M. Driessen. 2002. Signal peptides of secreted proteins of the archaeon Sulfolobus solfataricus: a genomic survey. Arch. Microbiol. 177:209-216.
2. Allen, F. H., J. E. Davies, J. J. Galloy, O. Johnson, O. Kennard, C. F. Macrae, E. M. Mitchell, G. F. Mitchell, J. M. Smith, and D. G. Watson. 1991. The development of versions 3 and 4 of the Cambridge Structural Database System. J. Chem. Inf. Comput. Sci. 31:187-204.
3. Altschul, S. F., T. L. Madden, A. A. Schaffer, J. Zhang, Z. Zhang, W. Miller, and D. J. Lipman. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25:3389-3402.
4. Bates, P. A., L. A. Kelley, R. M. MacCallum, and M. J. Sternberg. 2001. Enhancement of protein modeling by human intervention in applying the automatic programs 3D-JIGSAW and 3D-PSSM. Proteins Suppl. 5:39-46.
5. Bevers, L. E., E. Bol, P.-L. Hagedoorn, and W. R. Hagen. 2005. WOR5, a novel tungsten-containing aldehyde oxidoreductase from Pyrococcus furiosus with a broad substrate specificity. J. Bacteriol. 187:7056-7061.
6. Engelman, D. M., T. A. Steitz, and A. Goldman. 1986. Identifying nonpolar transbilayer helixes in amino acid sequences of membrane proteins. Annu. Rev. Biophys. Biophys. Chem. 15:321-353.
7. Fiala, G., and K. O. Stetter. 1986. Pyrococcus furiosus sp. nov. represents a novel genus of marine heterotrophic archaebacteria growing optimally at 100°C. Arch. Microbiol. 145:56-61.
8. Hagedoorn, P. L., P. van't Slot, H. P. van Leeuwen, and W. R. Hagen. 2001. Electroanalytical determination of tungsten and molybdenum in proteins. Anal. Biochem. 297:71-78.
9. Hille, R. 2002. Molybdenum and tungsten in biology. Trends Biochem. Sci. 27:360-367.
10. Hu, Y., S. Rech, R. P. Gunsalus, and D. C. Rees. 1997. Crystal structure of the molybdate binding protein ModA. Nat. Struct. Biol. 4:703-707.
11. Hung, L. W., I. X. Wang, K. Nikaido, P. Q. Liu, G. F. Ames, and S. H. Kim. 1998. Crystal structure of the ATP-binding subunit of an ABC transporter. Nature 396:703-707.
12. Imperial, J., M. Hadi, and N. K. Amy. 1998. Molybdate binding by ModA, the periplasmic component of the Escherichia coli mod molybdate transport system. Biochim. Biophys. Acta Biomembranes 1370:337-346.
13. Kletzin, A., and M. W. W. Adams. 1996. Tungsten in biological systems. FEMS Microbiol. Rev. 18:5-63.
14. Koning, S. M., M. G. L. Elferink, W. N. Konings, and A. J. M. Driessen. 2001. Cellobiose uptake in the hyperthermophilic archaeon Pyrococcus furiosus is mediated by an inducible, high-affinity ABC transporter. J. Bacteriol. 183:4979-4984.
15. Koonin, E. V., Y. I. Wolf, and L. Aravind. 2000. Protein fold recognition using sequence profiles and its application in structural genomics. Adv. Protein Chem. 54:245-275.
16. Lawson, D. M., C. E. M. Williams, L. A. Mitchenall, and R. N. Pau. 1998. Ligand size is a major determinant of specificity in periplasmic oxyanion-binding proteins: the 1.2 Å resolution crystal structure of Azotobacter vinelandii ModA. Structure (London) 6:1529-1539.
17. Makdessi, K., J. R. Andreesen, and A. Pich. 2001. Tungstate uptake by a highly specific ABC transporter in Eubacterium acidaminophilum. J. Biol. Chem. 276:24557-24564.
18. Mendel, R. R. 2005. Molybdenum: biological activity and metabolism. Dalton Trans. 2005:3404-3409.
19. Mourez, M., M. Hofnung, and E. Dassa. 1997. Subunit interactions in ABC transporters: a conserved sequence in hydrophobic membrane proteins of periplasmic permeases defines an important site of interaction with the ATPase subunits. EMBO J. 16:3066-3077.
20. Mukund, S., and M. W. Adams. 1993. Characterization of a novel tungsten-containing formaldehyde ferredoxin oxidoreductase from the hyperthermophilic archaeon, Thermococcus litoralis, A role for tungsten in peptide catabolism. J. Biol. Chem. 268:13592-13600.
21. Mukund, S., and M. W. Adams. 1991. The novel tungsten-iron-sulfur protein of the hyperthermophilic archaebacterium, Pyrococcus furiosus, is an aldehyde ferredoxin oxidoreductase. Evidence for its participation in a unique glycolytic pathway. J. Biol. Chem. 266:14208-14216.
22. Mukund, S., and M. W. W. Adams. 1995. Glyceraldehyde-3-phosphate ferredoxin oxidoreductase, a novel tungsten-containing enzyme with a potential glycolytic role in the hyperthermophilic archaeon Pyrococcus furiosus. J. Biol. Chem. 270:8389-8392.
23. Mukund, S., and M. W. W. Adams. 1996. Molybdenum and vanadium do not replace tungsten in the catalytically active forms of the three tungstoenzymes in the hyperthermophilic archaeon Pyrococcus furiosus. J. Bacteriol. 178:163-167.
24. Pratte, B. S., and T. Thiel. 2006. High-affinity vanadate transport system in the cyanobacterium Anabaena variabilis ATCC 29413. J. Bacteriol. 188:464-468.
25. Rajagopalan, K. V., and J. L. Johnson. 1992. The pterin molybdenum cofactors. J. Biol. Chem. 267:10199-10202.
26. Rauh, D., A. Graentzdoerffer, K. Granderath, J. R. Andreesen, and A. Pich. 2004. Tungsten-containing aldehyde oxidoreductase of Eubacterium acidaminophilum. Isolation, characterization and molecular analysis. Eur. J. Biochem. 271:212-219.
27. Rech, S., U. Deppenmeier, and R. P. Gunsalus. 1995. Regulation of the molybdate transport operon, modABCD, of Escherichia coli in response to molybdate availability. J. Bacteriol. 177:1023-1029.
28. Rech, S., C. Wolin, and R. P. Gunsalus. 1996. Properties of the periplasmic ModA molybdate-binding protein of Escherichia coli. J. Biol. Chem. 271:2557-2562.
29. Robb, F. T., D. L. Maeder, J. R. Brown, J. DiRuggiero, M. D. Stump, R. K. Yeh, R. B. Weiss, and D. M. Dunn. 2001. Genomic sequence of hyperthermophile, Pyrococcus furiosus: implications for physiology and enzymology. Methods Enzymol. 330:134-157.
30. Roy, R., and M. W. W. Adams. 2002. Characterization of a fourth tungsten-containing enzyme from the hyperthermophilic archaeon Pyrococcus furiosus. J. Bacteriol. 184:6952-6956.
31. Roy, R., S. Mukund, G. J. Schut, D. M. Dunn, R. Weiss, and M. W. W. Adams. 1999. Purification and molecular characterization of the tungsten-containing formaldehyde ferredoxin oxidoreductase from the hyperthermophilic archaeon Pyrococcus furiosus: the third of a putative five-member tungstoenzyme family. J. Bacteriol. 181:1171-1180.
32. Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
33. Schmitt, L., and R. Tampe. 2002. Structure and mechanism of ABC transporters. Curr. Opin. Struct. Biol. 12:754-760.
34. Schut, G. J., S. D. Brehm, S. Datta, and M. W. W. Adams. 2003. Whole-genome DNA microarray analysis of a hyperthermophile and an archaeon: Pyrococcus furiosus grown on carbohydrates or peptides. J. Bacteriol. 185:3935-3947.
35. Schwarz, G. 2005. Molybdenum cofactor biosynthesis and deficiency. Cell. Mol. Life Sci. 62:2792-2810.
36. Siebers, B., B. Tjaden, K. Michalke, C. Doerr, H. Ahmed, M. Zaparty, P. Gordon, C. W. Sensen, A. Zibat, H.-P. Klenk, S. C. Schuster, and R. Hensel. 2004. Reconstruction of the central carbohydrate metabolism of Thermoproteus tenax by use of genomic and biochemical data. J. Bacteriol. 186:2179-2194.
37. Sigurskjold, B. W. 2000. Exact analysis of competition ligand binding by displacement isothermal titration calorimetry. Anal. Biochem. 277:260-266.
38. Weinberg, M. V., G. J. Schut, S. Brehm, S. Datta, and M. W. W. Adams. 2005. Cold shock of a hyperthermophilic archaeon: Pyrococcus furiosus exhibits multiple responses to a suboptimal growth temperature with a key role for membrane-bound glycoproteins. J. Bacteriol. 187:336-348.
39. Zdobnov, E. M., and R. Apweiler. 2001. InterProScan-an integration platform for the signature-recognition methods in InterPro. Bioinformatics (Oxford) 17:847-848.