High-temperature ethanol fermentation and transformation with linear DNA in the thermotolerant yeast Kluyveromyces marxianus DMKU3-1042

Applied and Environmental Microbiology

Volumn 74, Issue 24, 2008, Pages 7514-7521

  Nonklang, Sanom ^a   Abdel Banat, Babiker M A ^a   Cha aim, Kamonchai ^a   Moonjai, Nareerat ^b   Hoshida, Hisashi ^a   Limtong, Savitree ^c   Yamada, Mamoru ^a   Akada, Rinji ^a  

^a YAMAGUCHI UNIVERSITY GRADUATE SCHOOL OF MEDICINE   (Japan)

^b UBON RATCHATHANI UNIVERSITY   (Thailand)

^c KASETSART UNIVERSITY   (Thailand)

Author keywords

[No Author keywords available]

Indexed keywords

BIOCHEMICAL ENGINEERING; DNA; ETHANOL; GENES; GENETIC ENGINEERING; GLYCEROL; GROWTH (MATERIALS); NUCLEIC ACIDS; ORGANIC ACIDS; STRAIN; SUGAR SUBSTITUTES; SUGARS;

AMYLASE GENES; BIOETHANOL; CELLOBIOSE; ETHANOL FERMENTATIONS; ETHANOL PRODUCTIONS; HETEROLOGOUS PROTEINS; HIGH TEMPERATURES; KLUYVEROMYCES MARXIANUS; MOLECULAR GENETIC; S. CEREVISIAE; SACCHAROMYCES CEREVISIAE; SOUTHERN BLOT HYBRIDIZATIONS; TRANSFORMANTS;

DNA SEQUENCES;

ALCOHOL; DNA;

BIOFUEL; COMPARATIVE STUDY; COST-BENEFIT ANALYSIS; DNA; ETHANOL; FERMENTATION; GENE EXPRESSION; GENETIC ENGINEERING; GROWTH RATE; HIGH TEMPERATURE; PROTEIN; SUGAR; TEMPERATURE TOLERANCE; YEAST;

ALCOHOL PRODUCTION; ARTICLE; BACTERIAL GROWTH; BACTERIAL STRAIN; FERMENTATION; GENE DISRUPTION; GENE INSERTION; HEAT TOLERANCE; HIGH TEMPERATURE; KLUYVEROMYCES; KLUYVEROMYCES MARXIANUS; NONHUMAN; POLYMERASE CHAIN REACTION; SACCHAROMYCES CEREVISIAE; SOUTHERN BLOTTING;

ALPHA-AMYLASES; BASE SEQUENCE; BLOTTING, SOUTHERN; CARBOHYDRATE METABOLISM; DNA, FUNGAL; ETHANOL; FERMENTATION; FUNGAL PROTEINS; HOT TEMPERATURE; KLUYVEROMYCES; MOLECULAR SEQUENCE DATA; RECOMBINATION, GENETIC; SACCHAROMYCES CEREVISIAE; SEQUENCE ALIGNMENT; TRANSFORMATION, GENETIC;

ASPERGILLUS; KLUYVEROMYCES MARXIANUS; SACCHAROMYCES CEREVISIAE;

EID: 57449118276     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.01854-08     Document Type: Article

References (49)

1. Akada, R., T. Kitagawa, S. Kaneko, D. Toyonaga, S. Ito, Y. Kakihara, H. Hoshida, S. Morimura, A. Kondo, and K. Kida. 2006. PCR-mediated seamless gene deletion and marker recycling in Saccharomyces cerevisiae. Yeast 23:399-405.
2. Akada, R., Y. Shimizu, Y. Matsushita, M. Kawahata, H. Hoshida, and Y. Nishizawa. 2002. Use of a YAP1 overexpression cassette conferring specific resistance to cerulenin and cycloheximide as an efficient selectable marker in the yeast Saccharomyces cerevisiae. Yeast 19:17-28.
3. Anderson, P. J., K. McNeil, and K. Watson. 1986. High-efficiency carbohydrate fermentation to ethanol at temperatures above 40°C by Kluyveromyces marxianus var. marxianus isolated from sugar mills. Appl. Environ. Microbiol. 51:1314-1320.
4. Ball, M. M., A. Raynal, M. Guerineau, and F. Iborra. 1999. Construction of efficient centromeric, multicopy and expression vectors for the yeast Kluyveromyces marxianus using homologous elements and the promoter of a purine-cytosine-like permease. J. Mol. Microbiol. Biotechnol. 1:347-353.
5. Banat, I. M., P. Nigam, D. Singh, R. Marchantand, and A. P. McHale. 1998. Ethanol production at elevated temperatures and alcohol concentrations. I. Yeasts in general. World J. Microbiol. Biotechnol. 14:809-821.
6. Banat, I. M., P. Nigram, and R. Marchant. 1992. Isolation of thermotolerant, fermentative yeasts growing at 52°C and producing ethanol at 45°C and 50deg;C. World J. Microbiol. Biotechnol. 8:259-263.
7. Bartkeviciute, D., R. Siekstele, and K. Sasnauskas. 2000. Heterologous expression of the Kluyveromyces marxianus endopolygalacturonase gene (EPG1) using versatile autonomously replicating vector for a wide range of host. Enzyme Microb. Technol. 26:653-656.
8. Becker, J., and E. Boles. 2003. A modified Saccharomyces cerevisiae strain that consumes L-arabinose and produces ethanol. Appl. Environ. Microbiol. 69:4144-4150.
9. Boeke, J. D., J. Trueheart, G. Natsoulis, and G. R. Fink. 1987. 5-Fluoroorotic acid as a selective agent in yeast molecular genetics. Methods Enzymol. 154:164-175.
10. Brachmann, C. B., A. Davies, G. J. Cost, E. Caputo, J. Li, P. Hieter, and J. D. Boeke. 1998. Designer deletion strains derived from Saccharomyces cerevisiae S288C: a useful set of strains and plasmids for PCR-mediated gene disruption and other applications. Yeast 14:115-132.
11. de Sanchez, S. B., and F. J. Castillo. 1980. Effect of pH on the growth of Kluyveromyces fragilis on deproteinized whey. Acta Cient. Venez. 31:24-26.
12. Dujon, B. 1996. The yeast genome project: what did we learn? Trends Genet. 12:263-270.
13. Dujon, B., D. Sherman, G. Fischer, P. Durrens, S. Casaregola, I. Lafontaine, J. De Montigny, C. Marck, C. Neuveglise, E. Talla, N. Goffard, L. Frangeul, M. Aigle, V. Anthouard, A. Babour, V. Barbe, S. Barnay, S. Blanchin, J. M. Beckerich, E. Beyne, C. Bleykasten, A. Boisrame, J. Boyer, L. Cattolico, F. Confanioleri, A. De Daruvar, L. Despons, E. Fabre, C. Fairhead, H. Ferry-Dumazet, A. Groppi, F. Hantraye, C. Hennequin, N. Jauniaux, P. Joyet, R. Kachouri, A. Kerrest, R. Koszul, M. Lemaire, I. Lesur, L. Ma, H. Muller, J. M. Nicaud, M. Nikolski, S. Oztas, O. Ozier-Kalogeropoulos, S. Pellenz, S. Potier, G. F. Richard, M. L. Straub, A. Suleau, D. Swennen, F. Tekaia, M. Wesolowski-Louvel, E. Westhof, B. Wirth, M. Zeniou-Meyer, I. Zivanovic, M. Bolotin-Fukuhara, A. Thierry, C. Bouchier, B. Caudron, C. Scarpelli, C. Gaillardin, J. Weissenbach, P. Wincker, and J. L. Souciet. 2004. Genome evolution in yeasts. Nature 430:35-44.
14. Fonseca, G. G., E. Heinzle, C. Wittmann, and A. K. Gombert. 2008. The yeast Kluyveromyces marxianus and its biotechnological potential. Appl. Microbiol. Biotechnol. 79:339-354.
15. Gietz, R. D., and R. A. Woods. 2002. Transformation of yeast by lithium acetate/single-stranded carrier DNA/polyethylene glycol method. Methods Enzymol. 350:87-96.
16. Hahn-Hagerdal, B., K. Karhumaa, M. Jeppsson, and M. F. Gorwa-Grauslund. 2007. Metabolic engineering for pentose utilization in Saccharomyces cerevisiae. Adv. Biochem. Eng. Biotechnol. 108:147-177.
17. Hang, Y. D., E. E. Woodams, and L. E. Hang. 2003. Utilization of corn silage juice by Kluyveromyces marxianus. Bioresour. Technol. 86:305-307.
18. Hashimoto, S., M. Ogura, K. Aritomi, H. Hoshida, Y. Nishizawa, and R. Akada. 2005. Isolation of auxotrophic mutants of diploid industrial yeast strains after UV mutagenesis. Appl. Environ. Microbiol. 71:312-319.
19. Hong, J., Y. Wang, H. Kumagai, and H. Tamaki. 2007. Construction of thermotolerant yeast expressing thermostable cellulase genes. J. Biotechnol. 130:114-123.
20. Hughes, D. B., N. J. Tudroszen, and C. J. Moye. 1984. The effect of temperature on the kinetics of ethanol production by a thermotolerant strain of Kluyveromyces marxianus. Biotechnol. Lett. 6:1-6.
21. Iborra, F. 1993. High efficiency transformation of Kluyveromyces marxianus by a replicative plasmid. Curr. Genet. 24:181-183.
22. Iborra, F., and M. M. Ball. 1994. Kluyveromyces marxianus small DNA fragments contain both autonomous replicative and centromeric elements that also function in Kluyveromyces lactis. Yeast 10:1621-1629.
23. Kaiser, C., S. Michaelis, and A. Mitchell. 1994. Methods in yeast genetics. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
24. Kumar, A., M. Seringhaus, M. C. Biery, R. J. Sarnovsky, L. Umansky, S. Piccirillo, M. Heidtman, K. H. Cheung, C. J. Dobry, M. B. Gerstein, N. L. Craig, and M. Snyder. 2004. Large-scale mutagenesis of the yeast genome using a Tn7-derived multipurpose transposon. Genome Res. 14:1975-1986.
25. Laloux, O., J. P. Cassart, J. Delcour, J. Van Beeumen, and J. Vandenhaute. 1991. Cloning and sequencing of the inulinase gene of Kluyveromyces marxianus var. marxianus ATCC 12424. FEBS Lett. 289:64-68.
26. Lertwattanasakul, N., K. Sootsuwan, S. Limtong, P. Thanonkeo, and M. Yamada. 2007. Comparison of the gene expression patterns of alcohol dehydrogenase isozymes in the thermotolerant yeast Kluyveromyces marxianus and their physiological functions. Biosci. Biotechnol. Biochem. 71:1170-1182.
27. Limtong, S., C. Sringiew, and W. Yongmanitchai. 2007. Production of fuel ethanol at high temperature from sugar cane juice by a newly isolated Kluyveromyces marxianus. Bioresour. Technol. 98:3367-3374.
28. Liu, Y.-G., N. Mitsukawa, T. Oosumi, and R. Whittier. 1995. Efficient isolation and mapping of Arabidopsis thaliana T-DNA insert junctions by thermal asymmetric interlaced PCR. Plant J. 8:457-463.
29. Margaritis, A., and P. Bajpai. 1982. Direct fermentation of D-xylose to ethanol by Kluyveromyces marxianus strains. Appl. Environ. Microbiol. 44: 1039-1041.
30. Martini, A., H. J. Phaff, and S. A. Douglass. 1972. Deoxyribonucleic acid base composition of species in the yeast genus Kluyveromyces van der Walt emend. van der Walt. J. Bacteriol. 111:481-487.
31. Mrak, E. M., H. J. Phaff, R. H. Vaughn, and H. N. Hansen. 1942. Yeasts occurring in souring figs. J. Bacteriol. 44:441-450.
32. Ozmihci, S., and F. Kargi. 2007. Comparison of yeast strains for batch ethanol fermentation of cheese-whey powder (CWP) solution. Lett. Appl. Microbiol. 44:602-606.
33. Passador-Gurgel, G. C., S. A. Furlan, J. K. Meller, and R. Jonas. 1996. Application of a microtitre reader system to the screening of inulinase nulinase-producing yeasts. Appl. Microbiol. Biotechnol. 45:158-161.
34. Pecota, D. C., V. Rajgarhia, and N. A. Da Silva. 2007. Sequential gene integration for the engineering of Kluyveromyces marxianus. J. Biotechnol. 127:408-416.
35. Rajoka, M. I., M. Ferhan, and A. M. Khalid. 2005. Kinetics and thermodynamics of ethanol production by a thermotolerant mutant of Saccharomyces cerevisiae in a microprocessor-controlled bioreactor. Lett. Appl. Microbiol. 40:316-321.
36. Ribeiro, O., A. K. Gombert, J. A. Teixeira, and L. Domingues. 2007. Application of the Cre-loxP system for multiple gene disruption in the yeast Kluyveromyces marxianus. J. Biotechnol. 131:20-26.
37. Ross-Macdonald, P., P. S. Coelho, T. Roemer, S. Agarwal, A. Kumar, R. Jansen, K. H. Cheung, A. Sheehan, D. Symoniatis, L. Umansky, M. Heidtman, F. K. Nelson, H. Iwasaki, K. Hager, M. Gerstein, P. Miller, G. S. Roeder, and M. Snyder. 1999. Large-scale analysis of the yeast genome by transposon tagging and gene disruption. Nature 402:413-418.
38. Sambrook, J., and D. W. Russell (ed.). 2001. Molecular cloning: a laboratory manual, 3rd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
39. Sedlak, M., and N. W. Ho. 2001. Expression of E. coli araBAD operon encoding enzymes for metabolizing L-arabinose in Saccharomyces cerevisiae. Enzyme Microb. Technol. 28:16-24.
40. Shimoda, C., A. Itadani, A. Sugino, and M. Furusawa. 2006. Isolation of thermotolerant mutants by using proofreading-deficient DNA polymerase delta as an effective mutator in Saccharomyces cerevisiae. Genes Genet. Syst. 81:391-397.
41. Sikorski, R. S., and P. Hieter. 1989. A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae. Genetics 122:19-27.
42. Singh, D., P. Nigam, I. M. Banat, I. M. Manta, R. Marchant, and A. P. McHale. 1998. Ethanol production at elevated temperatures and alcohol concentrations. II. Use of Kluyveromyces marxianus IBM3. World J. Microbiol. Biotechnol. 14:823-834.
43. Steensma, H. Y., F. C. M. de Jongh, and M. Linnekamp. 1988. The use of electrophoretic karyotypes in the classification of yeasts: Kluyveromyces marxianus and K. lactis. Curr. Genet. 14:311-317.
44. van Maris, A. J., A. A. Winkler, M. Kuyper, W. T. de Laat, J. P. van Dijken, and J. T. Pronk. 2007. Development of efficient xylose fermentation in Saccharomyces cerevisiae: xylose isomerase as a key component. Adv. Biochem. Eng. Biotechnol. 108:179-204.
45. Vaughan-Martini, A., G. Rosini, and A. Martini. 1988. Killer sensitivity patterns as a tool for the fingerprinting of strains within the yeast species Kluyveromyces lactis and K. marxianus. Biotechnol. Tech. 2:293-296.
46. Wilkins, M. R., M. Mueller, S. Eichling, and I. M. Banat. 2008. Fermentation of xylose by the thermotolerant yeast strains Kluyveromyces marxianus IBM2, IBM4 and IBM5 under anaerobic conditions. Process. Biochem. 43:346-350.
47. Wisselink, H. W., M. J. Toirkens, M. del Rosario Franco Berriel, A. A. Winkler, J. P. van Dijken, J. T. Pronk, and A. J. van Maris. 2007. Engineering of Saccharomyces cerevisiae for efficient anaerobic alcoholic fermentation of L-arabinose. Appl. Environ. Microbiol. 73:4881-4891.
48. Workman, W. E., and D. F. Day. 1983. Purification and properties of the α-fructofuranosidase from Kluyveromyces fragilis. FEBS Lett. 160:16-20.
49. Zafar, S., and M. Owais. 2006. Ethanol production from crude whey by Kluyveromyces marxianus. Biochem. Eng. J. 27:295-298.