-
1
-
-
0033636314
-
Mechanisms for activation and antagonism of an AMPA-sensitive glutamate receptor: Crystal structures of the GluR2 ligand binding core
-
Armstrong, N., and Gouaux, E. (2000) Mechanisms for activation and antagonism of an AMPA-sensitive glutamate receptor: Crystal structures of the GluR2 ligand binding core. Neuron 28, 165-181.
-
(2000)
Neuron
, vol.28
, pp. 165-181
-
-
Armstrong, N.1
Gouaux, E.2
-
2
-
-
0036888353
-
-
Hayward, S, and Lee, R. A, 2002 Improvements in the analysis of domain motions in proteins from conformational change: DynDom version 1.50. J. Mol. Graphics Modell. 21, 181-183
-
Hayward, S., and Lee, R. A. (2002) Improvements in the analysis of domain motions in proteins from conformational change: DynDom version 1.50. J. Mol. Graphics Modell. 21, 181-183.
-
-
-
-
3
-
-
0032912771
-
The glutamate receptor ion channels
-
Dingledine, R., Borges, K., Bowie, D., and Traynelis, S. (1999) The glutamate receptor ion channels. Pharmacol. Rev. 51, 7-61.
-
(1999)
Pharmacol. Rev
, vol.51
, pp. 7-61
-
-
Dingledine, R.1
Borges, K.2
Bowie, D.3
Traynelis, S.4
-
4
-
-
0030078594
-
Ionotropic glutamate receptors. Their possible role in the expression of hippocampal synaptic plasticity
-
Asztely, F., and Gustafsson, B. (1996) Ionotropic glutamate receptors. Their possible role in the expression of hippocampal synaptic plasticity. Mol. Neurobiol. 12, 1-11.
-
(1996)
Mol. Neurobiol
, vol.12
, pp. 1-11
-
-
Asztely, F.1
Gustafsson, B.2
-
5
-
-
0043033172
-
Structural basis for partial agonist action at ionotropic glutamate receptors
-
Jin, R., Banke, T. G., Mayer, M. L., Traynelis, S. F., and Gouaux, E. (2003) Structural basis for partial agonist action at ionotropic glutamate receptors. Nat. Neurosci. 6, 803-810.
-
(2003)
Nat. Neurosci
, vol.6
, pp. 803-810
-
-
Jin, R.1
Banke, T.G.2
Mayer, M.L.3
Traynelis, S.F.4
Gouaux, E.5
-
6
-
-
0037118049
-
Mechanism of glutamate receptor desensitization
-
Sun, Y., Olson, R., Horning, M., Armstrong, N., Mayer, M., and Gouaux, E. (2002) Mechanism of glutamate receptor desensitization. Nature 417, 245-253.
-
(2002)
Nature
, vol.417
, pp. 245-253
-
-
Sun, Y.1
Olson, R.2
Horning, M.3
Armstrong, N.4
Mayer, M.5
Gouaux, E.6
-
7
-
-
0032578635
-
Structure of a glutamate-receptor ligand-binding core in complex with kainate
-
Armstrong, N., Sun, Y., Chen, G. Q., and Gouaux, E. (1998) Structure of a glutamate-receptor ligand-binding core in complex with kainate. Nature 395, 913-917.
-
(1998)
Nature
, vol.395
, pp. 913-917
-
-
Armstrong, N.1
Sun, Y.2
Chen, G.Q.3
Gouaux, E.4
-
9
-
-
42249101227
-
NMR spectroscopy of the ligand-binding core of ionotropic glutamate receptor 2 bound to 5-substituted willardiine partial agonists
-
Fenwick, M. K., and Oswald, R. E. (2008) NMR spectroscopy of the ligand-binding core of ionotropic glutamate receptor 2 bound to 5-substituted willardiine partial agonists. J. Mol. Biol. 378, 673-685.
-
(2008)
J. Mol. Biol
, vol.378
, pp. 673-685
-
-
Fenwick, M.K.1
Oswald, R.E.2
-
10
-
-
0037143575
-
Structural mobility of the extracellular ligand-binding core of an ionotropic glutamate receptor. Analysis of NMR relaxation dynamics
-
McFeeters, R. L., and Oswald, R. E. (2002) Structural mobility of the extracellular ligand-binding core of an ionotropic glutamate receptor. Analysis of NMR relaxation dynamics. Biochemistry 41, 10472-10481.
-
(2002)
Biochemistry
, vol.41
, pp. 10472-10481
-
-
McFeeters, R.L.1
Oswald, R.E.2
-
11
-
-
14644394262
-
Microsecond-to-millisecond conformational dynamics demarcate the GluR2 glutamate receptor bound to agonists glutamate, quisqualate, and AMPA
-
Valentine, E. R., and Palmer, A. G. (2005) Microsecond-to-millisecond conformational dynamics demarcate the GluR2 glutamate receptor bound to agonists glutamate, quisqualate, and AMPA. Biochemistry 44, 3410-3417.
-
(2005)
Biochemistry
, vol.44
, pp. 3410-3417
-
-
Valentine, E.R.1
Palmer, A.G.2
-
12
-
-
37849027018
-
Chemical interplay in the mechanism of partial agonist activation in α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid receptors
-
Mankiewicz, K. A., Rambhadran, A., Wathen, L., and Jayaraman, V. (2008) Chemical interplay in the mechanism of partial agonist activation in α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid receptors. Biochemistry 47, 398-404.
-
(2008)
Biochemistry
, vol.47
, pp. 398-404
-
-
Mankiewicz, K.A.1
Rambhadran, A.2
Wathen, L.3
Jayaraman, V.4
-
13
-
-
33846828754
-
Role of the chemical interactions of the agonist in controlling a-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid receptor activation
-
Mankiewicz, K. A., Rambhadran, A., Du, M., Ramanoudjame, G., and Jayaraman, V. (2007) Role of the chemical interactions of the agonist in controlling a-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid receptor activation. Biochemistry 46, 1343-1349.
-
(2007)
Biochemistry
, vol.46
, pp. 1343-1349
-
-
Mankiewicz, K.A.1
Rambhadran, A.2
Du, M.3
Ramanoudjame, G.4
Jayaraman, V.5
-
14
-
-
1542319994
-
Spectroscopic and kinetic methods for ligand-protein interactions of glutamate receptor
-
Jayaraman, V. (2004) Spectroscopic and kinetic methods for ligand-protein interactions of glutamate receptor. Methods Enzymol. 380, 170-187.
-
(2004)
Methods Enzymol
, vol.380
, pp. 170-187
-
-
Jayaraman, V.1
-
15
-
-
0036154304
-
Molecular Dynamics Simulations of the Ligand-Binding Domain of the Ionotropic Glutamate Receptor GluR2
-
Arinaminpathy, Y., Sansom, M. S., and Biggin, P. C. (2002) Molecular Dynamics Simulations of the Ligand-Binding Domain of the Ionotropic Glutamate Receptor GluR2. Biophys. J. 82, 676-683.
-
(2002)
Biophys. J
, vol.82
, pp. 676-683
-
-
Arinaminpathy, Y.1
Sansom, M.S.2
Biggin, P.C.3
-
16
-
-
35148826056
-
The free energy landscapes governing conformational changes in a glutamate receptor ligand-binding domain
-
Lau, A. Y., and Roux, B. (2007) The free energy landscapes governing conformational changes in a glutamate receptor ligand-binding domain. Structure 15, 1203-1214.
-
(2007)
Structure
, vol.15
, pp. 1203-1214
-
-
Lau, A.Y.1
Roux, B.2
-
17
-
-
27744445169
-
Protein flexibility using constraints from molecular dynamics simulations
-
Mamonova, T., Hespenheide, B., Straub, R., Thorpe, M. F., and Kurnikova, M. (2005) Protein flexibility using constraints from molecular dynamics simulations. Phys. Biol. 2, S137-S147.
-
(2005)
Phys. Biol
, vol.2
-
-
Mamonova, T.1
Hespenheide, B.2
Straub, R.3
Thorpe, M.F.4
Kurnikova, M.5
-
18
-
-
0030963093
-
Defining long range order in NMR structure determination from the dependence of heteronuclear relaxation times on rotational diffusion anisotropy
-
Tjandra, N., Garrett, D. S., Gronenborn, A. M., Bax, A., and Clore, G. M. (1997) Defining long range order in NMR structure determination from the dependence of heteronuclear relaxation times on rotational diffusion anisotropy. Nat. Struct. Biol. 4, 443-449.
-
(1997)
Nat. Struct. Biol
, vol.4
, pp. 443-449
-
-
Tjandra, N.1
Garrett, D.S.2
Gronenborn, A.M.3
Bax, A.4
Clore, G.M.5
-
20
-
-
28244465987
-
Synthesis and pharmacology of willardiine derivatives acting as antagonists of kainate receptors
-
Dolman, N. P., Troop, H. M., More, J. C., Alt, A., Knauss, J. L., Nistico, R., Jack, S., Morley, R. M., Bortolotto, Z. A., Roberts, P. J., Bleakman, D., Collingridge, G. L., and Jane, D. E. (2005) Synthesis and pharmacology of willardiine derivatives acting as antagonists of kainate receptors. J. Med. Chem. 48, 7867-7881.
-
(2005)
J. Med. Chem
, vol.48
, pp. 7867-7881
-
-
Dolman, N.P.1
Troop, H.M.2
More, J.C.3
Alt, A.4
Knauss, J.L.5
Nistico, R.6
Jack, S.7
Morley, R.M.8
Bortolotto, Z.A.9
Roberts, P.J.10
Bleakman, D.11
Collingridge, G.L.12
Jane, D.E.13
-
21
-
-
0030693165
-
Synthesis of willardiine and 6-azawillardiine analogs: Pharmacological characterization on cloned homomeric human AMPA and kainate receptor subtypes
-
Jane, D. E., Hoo, K., Kamboj, R., Deverill, M., Bleakman, D., and Mandelzys, A. (1997) Synthesis of willardiine and 6-azawillardiine analogs: Pharmacological characterization on cloned homomeric human AMPA and kainate receptor subtypes. J. Med. Chem. 40, 3645-3650.
-
(1997)
J. Med. Chem
, vol.40
, pp. 3645-3650
-
-
Jane, D.E.1
Hoo, K.2
Kamboj, R.3
Deverill, M.4
Bleakman, D.5
Mandelzys, A.6
-
23
-
-
0031471216
-
Overexpression of a glutamate receptor (GluR2) ligand binding domain in Escherichia coli: Application of a novel protein folding screen
-
Chen, G. Q., and Gouaux, E. (1997) Overexpression of a glutamate receptor (GluR2) ligand binding domain in Escherichia coli: Application of a novel protein folding screen. Proc. Natl. Acad. Sci. US.A. 94, 13431-13436.
-
(1997)
Proc. Natl. Acad. Sci. US.A
, vol.94
, pp. 13431-13436
-
-
Chen, G.Q.1
Gouaux, E.2
-
24
-
-
0004136246
-
-
Cold Spring Harbor Laboratory Press, New York
-
Maniatis, T., Fritsch, E. F., and Sambrook, J. (1982) Molecular Cloning, Cold Spring Harbor Laboratory Press, New York.
-
(1982)
Molecular Cloning
-
-
Maniatis, T.1
Fritsch, E.F.2
Sambrook, J.3
-
25
-
-
0029400480
-
NMRPipe: A multidimensional spectral processing system based on UNIX pipes
-
Delaglio, F., Grzesiek, S., Vuister, G. W., Zhu, G., Pfeifer, J., and Bax, A. (1995) NMRPipe: A multidimensional spectral processing system based on UNIX pipes. J. Biomol. NMR 6, 277-293.
-
(1995)
J. Biomol. NMR
, vol.6
, pp. 277-293
-
-
Delaglio, F.1
Grzesiek, S.2
Vuister, G.W.3
Zhu, G.4
Pfeifer, J.5
Bax, A.6
-
26
-
-
0004040543
-
-
University of California, San Francisco
-
Goddard, T. D., and Kneller, D. G. (2003) SPARKY 3, University of California, San Francisco.
-
(2003)
SPARKY 3
-
-
Goddard, T.D.1
Kneller, D.G.2
-
27
-
-
0037551646
-
Alignment of biological macromolecules in novel nonionic liquid crystalline media for NMR experiments
-
Ruckert, M., and Otting, G. (2000) Alignment of biological macromolecules in novel nonionic liquid crystalline media for NMR experiments. J. Am. Chem. Soc. 122, 7793-7797.
-
(2000)
J. Am. Chem. Soc
, vol.122
, pp. 7793-7797
-
-
Ruckert, M.1
Otting, G.2
-
28
-
-
0000578582
-
A liquid crystalline medium for measuring residual dipolar couplings over a wide range of temperatures
-
Wang, H., Eberstadt, M., Olejniczak, E. T., Meadows, R. P., and Fesik, S. W. (1998) A liquid crystalline medium for measuring residual dipolar couplings over a wide range of temperatures. J. Biomol. NMR 12, 443-446.
-
(1998)
J. Biomol. NMR
, vol.12
, pp. 443-446
-
-
Wang, H.1
Eberstadt, M.2
Olejniczak, E.T.3
Meadows, R.P.4
Fesik, S.W.5
-
29
-
-
0034755357
-
Controlling residual dipolar couplings in high-resolution NMR of proteins by strain induced alignment in a gel
-
Ishii, Y., Markus, M. A., and Tycko, R. (2001) Controlling residual dipolar couplings in high-resolution NMR of proteins by strain induced alignment in a gel. J. Biomol. NMR 21, 141-151.
-
(2001)
J. Biomol. NMR
, vol.21
, pp. 141-151
-
-
Ishii, Y.1
Markus, M.A.2
Tycko, R.3
-
30
-
-
0034066681
-
Characterization of surfactant liquid crystal phases suitable for molecular alignment and measurement of dipolar couplings
-
Barrientos, L. G., Dolan, C., and Gronenborn, A. M. (2000) Characterization of surfactant liquid crystal phases suitable for molecular alignment and measurement of dipolar couplings. J. Biomol. NMR 16, 329-337.
-
(2000)
J. Biomol. NMR
, vol.16
, pp. 329-337
-
-
Barrientos, L.G.1
Dolan, C.2
Gronenborn, A.M.3
-
31
-
-
0042367594
-
Evaluation of backbone proton positions and dynamics in a small protein by liquid crystal NMR spectroscopy
-
Ulmer, T. S., Ramirez, B. E., Delaglio, F., and Bax, A. (2003) Evaluation of backbone proton positions and dynamics in a small protein by liquid crystal NMR spectroscopy. J. Am. Chem. Soc. 125, 9179-9191.
-
(2003)
J. Am. Chem. Soc
, vol.125
, pp. 9179-9191
-
-
Ulmer, T.S.1
Ramirez, B.E.2
Delaglio, F.3
Bax, A.4
-
32
-
-
0013293280
-
The Xplor-NIH NMR molecular structure determination package
-
Schwieters, C. D., Kuszewski, J. J., Tjandra, N., and Clore, G. M. (2003) The Xplor-NIH NMR molecular structure determination package. J. Magn. Reson. 160, 65-73.
-
(2003)
J. Magn. Reson
, vol.160
, pp. 65-73
-
-
Schwieters, C.D.1
Kuszewski, J.J.2
Tjandra, N.3
Clore, G.M.4
-
33
-
-
0037048594
-
A novel approach to the retrieval of structural and dynamic information from residual dipolar couplings using several oriented media in biomolecular NMR spectroscopy
-
Tolman, J. R. (2002) A novel approach to the retrieval of structural and dynamic information from residual dipolar couplings using several oriented media in biomolecular NMR spectroscopy. J. Am. Chem. Soc. 124, 12020-12030.
-
(2002)
J. Am. Chem. Soc
, vol.124
, pp. 12020-12030
-
-
Tolman, J.R.1
-
34
-
-
42249083961
-
Backbone chemical shift assignment of a glutamate receptor ligand binding domain in complexes with five partial agonists
-
Fenwick, M. K., and Oswald, R. E. (2008) Backbone chemical shift assignment of a glutamate receptor ligand binding domain in complexes with five partial agonists. Biomol. NMR Assignments 1, 241-243.
-
(2008)
Biomol. NMR Assignments
, vol.1
, pp. 241-243
-
-
Fenwick, M.K.1
Oswald, R.E.2
-
35
-
-
0038625032
-
Tuning activation of the AMPA-sensitive GluR2 ion channel by genetic adjustment of agonist-induced conformational changes
-
Armstrong, N., Mayer, M., and Gouaux, E. (2003) Tuning activation of the AMPA-sensitive GluR2 ion channel by genetic adjustment of agonist-induced conformational changes. Proc. Natl. Acad. Sci. U.S.A. 100, 5736-5741.
-
(2003)
Proc. Natl. Acad. Sci. U.S.A
, vol.100
, pp. 5736-5741
-
-
Armstrong, N.1
Mayer, M.2
Gouaux, E.3
-
36
-
-
0032578177
-
13C dipolar couplings in a perdeuterated 30 kDa protein dissolved in a dilute liquid crystalline phase
-
13C dipolar couplings in a perdeuterated 30 kDa protein dissolved in a dilute liquid crystalline phase. J. Am. Chem. Soc. 120, 7385-7386.
-
(1998)
J. Am. Chem. Soc
, vol.120
, pp. 7385-7386
-
-
Wang, Y.X.1
Marquardt, J.L.2
Wingfield, P.T.3
Stahl, S.J.4
Lee-Huang, S.5
Torchia, D.A.6
Bax, A.7
-
37
-
-
0034602921
-
Orienting domains in proteins using dipolar couplings measured by liquid-state NMR: Differences in solution and crystal forms of maltodextrin binding protein loaded with β-cyclodextrin
-
Skrynnikov, N. R., Goto, N. K., Yang, D., Choy, W. Y., Tolman, J. R., Mueller, G. A., and Kay, L. E. (2000) Orienting domains in proteins using dipolar couplings measured by liquid-state NMR: Differences in solution and crystal forms of maltodextrin binding protein loaded with β-cyclodextrin. J. Mol. Biol. 295, 1265-1273.
-
(2000)
J. Mol. Biol
, vol.295
, pp. 1265-1273
-
-
Skrynnikov, N.R.1
Goto, N.K.2
Yang, D.3
Choy, W.Y.4
Tolman, J.R.5
Mueller, G.A.6
Kay, L.E.7
-
38
-
-
0035925113
-
Structural and dynamic analysis of residual dipolar coupling data for proteins
-
Tolman, J. R., Al-Hashimi, H. M., Kay, L. E., and Prestegard, J. H. (2001) Structural and dynamic analysis of residual dipolar coupling data for proteins. J. Am. Chem. Soc. 123, 1416-1424.
-
(2001)
J. Am. Chem. Soc
, vol.123
, pp. 1416-1424
-
-
Tolman, J.R.1
Al-Hashimi, H.M.2
Kay, L.E.3
Prestegard, J.H.4
-
39
-
-
53249114246
-
-
submitted for publication
-
Ahmed, A. H., Wang, Q., Sondermann, H., and Oswald, R. E. (2008)Structure of the S1S2 glutamate binding domain of GluR3, submitted for publication.
-
(2008)
Structure of the S1S2 glutamate binding domain of GluR3
-
-
Ahmed, A.H.1
Wang, Q.2
Sondermann, H.3
Oswald, R.E.4
-
40
-
-
0026556811
-
Activation and desensitization of AMPA/kainate receptors by novel derivatives of willardiine
-
Patneau, D. K., Mayer, M. L., Jane, D. E., and Watkins, J. C. (1992) Activation and desensitization of AMPA/kainate receptors by novel derivatives of willardiine. J. Neurosci. 12, 595-606.
-
(1992)
J. Neurosci
, vol.12
, pp. 595-606
-
-
Patneau, D.K.1
Mayer, M.L.2
Jane, D.E.3
Watkins, J.C.4
-
41
-
-
33645321641
-
Glutamate receptors at atomic resolution
-
Mayer, M. L. (2006) Glutamate receptors at atomic resolution. Nature 440, 456-462.
-
(2006)
Nature
, vol.440
, pp. 456-462
-
-
Mayer, M.L.1
-
42
-
-
17644377289
-
AMPA receptor binding cleft mutations that alter affinity, efficacy, and recovery from desensitization
-
Robert, A., Armstrong, N., Gouaux, J. E., and Howe, J. R. (2005) AMPA receptor binding cleft mutations that alter affinity, efficacy, and recovery from desensitization. J. Neurosci. 25, 3752-3762.
-
(2005)
J. Neurosci
, vol.25
, pp. 3752-3762
-
-
Robert, A.1
Armstrong, N.2
Gouaux, J.E.3
Howe, J.R.4
-
43
-
-
0038037859
-
Mechanisms of activation, inhibition and specificity: Crystal structures of the NMDA receptor NR1 ligand-binding core
-
Furukawa, H., and Gouaux, E. (2003) Mechanisms of activation, inhibition and specificity: Crystal structures of the NMDA receptor NR1 ligand-binding core. EMBO J. 22, 2873-2885.
-
(2003)
EMBO J
, vol.22
, pp. 2873-2885
-
-
Furukawa, H.1
Gouaux, E.2
-
44
-
-
20444408992
-
Mechanism of partial agonist action at the NR1 subunit of NMDA receptors
-
Inanobe, A., Furukawa, H., and Gouaux, E. (2005) Mechanism of partial agonist action at the NR1 subunit of NMDA receptors. Neuron 47, 71-84.
-
(2005)
Neuron
, vol.47
, pp. 71-84
-
-
Inanobe, A.1
Furukawa, H.2
Gouaux, E.3
-
45
-
-
38549125923
-
Structural and single-channel results indicate that the rates of ligand binding domain closing and opening directly impact AMPA receptor gating
-
Zhang, W., Cho, Y., Lolis, E., and Howe, J. R. (2008) Structural and single-channel results indicate that the rates of ligand binding domain closing and opening directly impact AMPA receptor gating. J. Neurosci. 28, 932-943.
-
(2008)
J. Neurosci
, vol.28
, pp. 932-943
-
-
Zhang, W.1
Cho, Y.2
Lolis, E.3
Howe, J.R.4
-
46
-
-
33845552240
-
Hydrogen-Bond Length and H-1-NMR Chemical Shifts in Proteins
-
Wagner, G., Pardi, A., and Wuthrich, K. (1983) Hydrogen-Bond Length and H-1-NMR Chemical Shifts in Proteins. J. Am. Chem. Soc. 105, 5948-5949.
-
(1983)
J. Am. Chem. Soc
, vol.105
, pp. 5948-5949
-
-
Wagner, G.1
Pardi, A.2
Wuthrich, K.3
-
47
-
-
0032486422
-
The tetrameric structure of a glutamate receptor channel
-
Rosenmund, C., Stern-Bach, Y., and Stevens, C. F. (1998) The tetrameric structure of a glutamate receptor channel. Science 280, 1596-1599.
-
(1998)
Science
, vol.280
, pp. 1596-1599
-
-
Rosenmund, C.1
Stern-Bach, Y.2
Stevens, C.F.3
-
48
-
-
16544383427
-
Ionotropic glutamate receptor recognition and activation
-
Oswald, R. E. (2004) Ionotropic glutamate receptor recognition and activation. Adv. Protein Chem. 68, 313-349.
-
(2004)
Adv. Protein Chem
, vol.68
, pp. 313-349
-
-
Oswald, R.E.1
-
49
-
-
0038219813
-
Probing the function, conformational plasticity, and dimer-dimer contacts of the GluR2 ligand-binding core: Studies of 5-substituted willardiines and GluR2 S1S2 in the crystal
-
Jin, R., and Gouaux, E. (2003) Probing the function, conformational plasticity, and dimer-dimer contacts of the GluR2 ligand-binding core: Studies of 5-substituted willardiines and GluR2 S1S2 in the crystal. Biochemistry 42, 5201-5213.
-
(2003)
Biochemistry
, vol.42
, pp. 5201-5213
-
-
Jin, R.1
Gouaux, E.2
|