Genome-scale model for Clostridium acetobutylicum: Part I. Metabolic network resolution and analysis

Biotechnology and Bioengineering

Volumn 101, Issue 5, 2008, Pages 1036-1052

  Senger, Ryan S ^a,b,c   Papoutsakis, Eleftherios T ^a,b,c  

^a UNIVERSITY OF DELAWARE   (United States)

^b University of Delaware   (United States)

^c Northwestern University   (United States)

Author keywords

Clostridium acetobutylicum; Genome scale model; Metabolic flux analysis

Indexed keywords

AMINES; AMINO ACIDS; AUTOMATION; BIOCHEMICAL ENGINEERING; BIOCHEMISTRY; BIOSYNTHESIS; CELL MEMBRANES; GENE ENCODING; ORGANIC ACIDS; REENGINEERING; REVERSE ENGINEERING; THERMOANALYSIS; UREA;

ARGININE BIOSYNTHESES; AUTOMATED APPROACHES; BUTYRATE KINASES; CLOSTRIDIUM ACETOBUTYLICUM; ENGINEERING ALGORITHMS; GENES ENCODING; GENOME-SCALE METABOLIC NETWORKS; GENOME-SCALE MODEL; IN SILICO; INTRACELLULAR METABOLITES; KNOCK OUTS; MEGAPLASMID; MEMBRANE TRANSPORTS; METABOLIC FLUX ANALYSIS; METABOLIC NETWORKS; METABOLIC PATHWAYS; OXOGLUTARATE; PHYSIOLOGICAL CONDITIONS; REACTION NETWORKS; SCALE MODELS; TCA CYCLES; THERMODYNAMIC ANALYSIS;

MODAL ANALYSIS;

2 OXOGLUTARIC ACID; ACETYLORNITHINE AMINOTRANSFERASE; AMINOTRANSFERASE; BACTERIAL ENZYME; BUTYRATE KINASE; GLUTAMIC ACID; PHOSPHOTRANSFERASE; UNCLASSIFIED DRUG;

ALGORITHM; AMINO ACID SYNTHESIS; ARTICLE; BACTERIAL GENOME; BACTERIAL GROWTH; BACTERIAL METABOLISM; BACTERIAL STRAIN; BIOENGINEERING; CITRIC ACID CYCLE; CLOSTRIDIUM ACETOBUTYLICUM; GENE IDENTIFICATION; MEMBRANE TRANSPORT; METABOLITE; MODEL; NONHUMAN; PLASMID; THERMODYNAMICS; UREA CYCLE;

ARGININE; CELL GROWTH PROCESSES; CLOSTRIDIUM ACETOBUTYLICUM; COMPUTATIONAL BIOLOGY; GENE KNOCKOUT TECHNIQUES; GENOME, BACTERIAL; GLUTAMIC ACID; KINETICS; METABOLIC NETWORKS AND PATHWAYS; MODELS, BIOLOGICAL; ORNITHINE; PHOSPHOTRANSFERASES (CARBOXYL GROUP ACCEPTOR); THERMODYNAMICS; TRANSAMINASES; UREA;

CLOSTRIDIA; CLOSTRIDIUM ACETOBUTYLICUM;

EID: 51849142353     PISSN: 00063592     EISSN: 10970290     Source Type: Journal    
DOI: 10.1002/bit.22010     Document Type: Article

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