-
1
-
-
0031733597
-
Adaptation of Comamonas testosteroni TA441 to utilize phenol: Organization and regulation of the genes involved in phenol degradation
-
H Arai S Akahira T Ohishi M Maeda T Kudo 1998 Adaptation of Comamonas testosteroni TA441 to utilize phenol: organization and regulation of the genes involved in phenol degradation Microbiology 144 2895 2903
-
(1998)
Microbiology
, vol.144
, pp. 2895-2903
-
-
Arai, H.1
Akahira, S.2
Ohishi, T.3
Maeda, M.4
Kudo, T.5
-
2
-
-
0033910753
-
Arrangement and regulation of the genes for meta-pathway enzymes required for degradation of phenol in Comamonas testosteroni TA441
-
H Arai T Ohishi MY Chang T Kudo 2000 Arrangement and regulation of the genes for meta-pathway enzymes required for degradation of phenol in Comamonas testosteroni TA441 Microbiology 146 1707 1715
-
(2000)
Microbiology
, vol.146
, pp. 1707-1715
-
-
Arai, H.1
Ohishi, T.2
Chang, M.Y.3
Kudo, T.4
-
3
-
-
0037183499
-
Biochemical, Mössbauer, and EPR studies of the diiron cluster of phenol hydroxylase from Pseudomonas sp. strain CF600
-
E Cadieux V Vrajmasu C Achim J Powlowski E Münck 2002 Biochemical, Mössbauer, and EPR studies of the diiron cluster of phenol hydroxylase from Pseudomonas sp. strain CF600 Biochemistry 41 10680 10691
-
(2002)
Biochemistry
, vol.41
, pp. 10680-10691
-
-
Cadieux, E.1
Vrajmasu, V.2
Achim, C.3
Powlowski, J.4
Münck, E.5
-
4
-
-
7044256746
-
Phenol hydroxylase and toluene/o-xylene monooxygenase from Pseudomonas stutzeri OX1: Interplay between two enzymes
-
V Cafaro V Izzo R Scognamiglio E Notomista P Capasso A Casbarra P Pucci A Di Donato 2004 Phenol hydroxylase and toluene/o-xylene monooxygenase from Pseudomonas stutzeri OX1: interplay between two enzymes Appl Environ Microbiol 70 2211 2219
-
(2004)
Appl Environ Microbiol
, vol.70
, pp. 2211-2219
-
-
Cafaro, V.1
Izzo, V.2
Scognamiglio, R.3
Notomista, E.4
Capasso, P.5
Casbarra, A.6
Pucci, P.7
Di Donato, A.8
-
5
-
-
0031832295
-
Structures of homologous composite transposons carrying cbaABC genes from Europe and North America
-
D Di Gioia M Peel F Fava RC Wyndham 1998 Structures of homologous composite transposons carrying cbaABC genes from Europe and North America Appl Environ Microbiol 64 1940 1946
-
(1998)
Appl Environ Microbiol
, vol.64
, pp. 1940-1946
-
-
Di Gioia, D.1
Peel, M.2
Fava, F.3
Wyndham, R.C.4
-
6
-
-
0038192439
-
The oxygenase component of phenol hydroxylase from Acinetobacter radioresistens S13
-
S Divari F Valetti P Caposio E Pessione M Cavaletto E Griva G Gribaudo G Gilardi C Giunta 2003 The oxygenase component of phenol hydroxylase from Acinetobacter radioresistens S13 Eur J Biochem 270 2244 2253
-
(2003)
Eur J Biochem
, vol.270
, pp. 2244-2253
-
-
Divari, S.1
Valetti, F.2
Caposio, P.3
Pessione, E.4
Cavaletto, M.5
Griva, E.6
Gribaudo, G.7
Gilardi, G.8
Giunta, C.9
-
7
-
-
0032053780
-
A novel phenol hydroxylase and catechol 2,3-dioxygenase from the thermophilic Bacillus thermoleovorans strain A2: Nucleotide sequence and analysis of the genes
-
FM Duffner R Muller 1998 A novel phenol hydroxylase and catechol 2,3-dioxygenase from the thermophilic Bacillus thermoleovorans strain A2: nucleotide sequence and analysis of the genes FEMS Microbiol Lett 161 37 45
-
(1998)
FEMS Microbiol Lett
, vol.161
, pp. 37-45
-
-
Duffner, F.M.1
Muller, R.2
-
8
-
-
0028786254
-
Genetic organization, nucleotide sequence and regulation of expression of genes encoding phenol hydroxylase and catechol 1,2-dioxygenase in Acinetobacter calcoaceticus NCIB8250
-
S Ehrt F Schirmer W Hillen 1995 Genetic organization, nucleotide sequence and regulation of expression of genes encoding phenol hydroxylase and catechol 1,2-dioxygenase in Acinetobacter calcoaceticus NCIB8250 Mol Microbiol 18 13 20
-
(1995)
Mol Microbiol
, vol.18
, pp. 13-20
-
-
Ehrt, S.1
Schirmer, F.2
Hillen, W.3
-
9
-
-
0025248690
-
Phenol and trichloroethylene degradation by Pseudomonas cepacia G4: Kinetics and interactions between substrates
-
BR Folsom PJ Chapman PH Pritchard 1990 Phenol and trichloroethylene degradation by Pseudomonas cepacia G4: kinetics and interactions between substrates Appl Environ Microbiol 56 1279 1285
-
(1990)
Appl Environ Microbiol
, vol.56
, pp. 1279-1285
-
-
Folsom, B.R.1
Chapman, P.J.2
Pritchard, P.H.3
-
10
-
-
0035491632
-
Group-specific monitoring of phenol hydroxylase genes for a functional assessment of phenol-stimulated trichloroethylene bioremediation
-
H Futamata S Harayama K Watanabe 2001 Group-specific monitoring of phenol hydroxylase genes for a functional assessment of phenol-stimulated trichloroethylene bioremediation Appl Environ Microbiol 67 4671 4677
-
(2001)
Appl Environ Microbiol
, vol.67
, pp. 4671-4677
-
-
Futamata, H.1
Harayama, S.2
Watanabe, K.3
-
12
-
-
0031852106
-
Phenol hydroxylase cloned from Ralstonia eutropha strain E2 exhibits novel kinetic properties
-
S Hino K Watanabe N Takahashi 1998 Phenol hydroxylase cloned from Ralstonia eutropha strain E2 exhibits novel kinetic properties Microbiology 144 1765 1772
-
(1998)
Microbiology
, vol.144
, pp. 1765-1772
-
-
Hino, S.1
Watanabe, K.2
Takahashi, N.3
-
13
-
-
0344875042
-
3- and 4-alkylphenol degradation pathway in Pseudomonas sp. strain KL28: Genetic organization of the lap gene cluster and substrate specificities of phenol hydroxylase and catechol 2,3-dioxygenase
-
JJ Jeong JH Kim CK Kim I Hwang K Lee 2003 3- and 4-alkylphenol degradation pathway in Pseudomonas sp. strain KL28: genetic organization of the lap gene cluster and substrate specificities of phenol hydroxylase and catechol 2,3-dioxygenase Microbiology 149 3265 3277
-
(2003)
Microbiology
, vol.149
, pp. 3265-3277
-
-
Jeong, J.J.1
Kim, J.H.2
Kim, C.K.3
Hwang, I.4
Lee, K.5
-
14
-
-
33748556953
-
Mutant AFM 2 of Alcaligenes faecalis for phenol biodegradation using He-Ne laser irradiation
-
Y Jiang J Wen Q Caiyin L Lin Z Hu 2006 Mutant AFM 2 of Alcaligenes faecalis for phenol biodegradation using He-Ne laser irradiation Chemosphere 65 1236 1241
-
(2006)
Chemosphere
, vol.65
, pp. 1236-1241
-
-
Jiang, Y.1
Wen, J.2
Caiyin, Q.3
Lin, L.4
Hu, Z.5
-
15
-
-
0029150754
-
Nucleotide sequence analysis of genes encoding a toluene/benzene-2- monooxygenase from Pseudomonas sp. strain JS150
-
GR Johnson RH Olsen 1995 Nucleotide sequence analysis of genes encoding a toluene/benzene-2-monooxygenase from Pseudomonas sp. strain JS150 Appl Environ Microbiol 61 3336 3346
-
(1995)
Appl Environ Microbiol
, vol.61
, pp. 3336-3346
-
-
Johnson, G.R.1
Olsen, R.H.2
-
16
-
-
0035487281
-
Genetic and functional analysis of the tbc operons for catabolism of alkyl- and chloroaromatic compounds in Burkholderia sp. strain JS150
-
HY Kahng JC Malinverni MM Majko JJ Kukor 2001 Genetic and functional analysis of the tbc operons for catabolism of alkyl- and chloroaromatic compounds in Burkholderia sp. strain JS150 Appl Environ Microbiol 67 4805 4816
-
(2001)
Appl Environ Microbiol
, vol.67
, pp. 4805-4816
-
-
Kahng, H.Y.1
Malinverni, J.C.2
Majko, M.M.3
Kukor, J.J.4
-
17
-
-
0023715368
-
Improved broad-host-range plasmids for DNA cloning in gram-negative bacteria
-
NT Keen S Tamaki D Kobayashi D Trollinger 1988 Improved broad-host-range plasmids for DNA cloning in gram-negative bacteria Gene 70 191 197
-
(1988)
Gene
, vol.70
, pp. 191-197
-
-
Keen, N.T.1
Tamaki, S.2
Kobayashi, D.3
Trollinger, D.4
-
18
-
-
0028914518
-
Characterization of the Bacillus stearothermophilus BR219 phenol hydroxylase gene
-
IC Kim PJ Oriel 1995 Characterization of the Bacillus stearothermophilus BR219 phenol hydroxylase gene Appl Environ Microbiol 61 1252 1256
-
(1995)
Appl Environ Microbiol
, vol.61
, pp. 1252-1256
-
-
Kim, I.C.1
Oriel, P.J.2
-
19
-
-
0029812685
-
Constitutive expression of the cloned phenol hydroxylase gene(s) from Alcaligenes eutrophus JMP134 and concomitant trichloroethylene oxidation
-
Y Kim P Ayoubi AR Harker 1996 Constitutive expression of the cloned phenol hydroxylase gene(s) from Alcaligenes eutrophus JMP134 and concomitant trichloroethylene oxidation Appl Environ Microbiol 62 3227 3233
-
(1996)
Appl Environ Microbiol
, vol.62
, pp. 3227-3233
-
-
Kim, Y.1
Ayoubi, P.2
Harker, A.R.3
-
21
-
-
27144478990
-
Chromosome-encoded gene cluster for the metabolic pathway that converts aniline to TCA-cycle intermediates in Delftia tsuruhatensis AD9
-
Q Liang M Takeo M Chen W Zhang Y Xu M Lin 2005 Chromosome-encoded gene cluster for the metabolic pathway that converts aniline to TCA-cycle intermediates in Delftia tsuruhatensis AD9 Microbiology 151 3435 3446
-
(2005)
Microbiology
, vol.151
, pp. 3435-3446
-
-
Liang, Q.1
Takeo, M.2
Chen, M.3
Zhang, W.4
Xu, Y.5
Lin, M.6
-
22
-
-
85010439719
-
A procedure for the isolation of deoxyribonucleic acid from microorganisms
-
J Marmur 1961 A procedure for the isolation of deoxyribonucleic acid from microorganisms J Mol Biol 3 208 218
-
(1961)
J Mol Biol
, vol.3
, pp. 208-218
-
-
Marmur, J.1
-
23
-
-
33749011395
-
Grouping of phenol hydroxylase and catechol 2,3-dioxygenase genes among phenol- and p-cresol-degrading Pseudomonas species and biotypes
-
M Merimaa E Heinaru M Liivak E Vedler A Heinaru 2006 Grouping of phenol hydroxylase and catechol 2,3-dioxygenase genes among phenol- and p-cresol-degrading Pseudomonas species and biotypes Arch Microbiol 186 287 296
-
(2006)
Arch Microbiol
, vol.186
, pp. 287-296
-
-
Merimaa, M.1
Heinaru, E.2
Liivak, M.3
Vedler, E.4
Heinaru, A.5
-
24
-
-
0033966288
-
Constitutive trichloroethylene degradation led by tac promoter chromosomally integrated upstream of phenol hydroxylase genes of Ralstonia sp. KN1 and its nucleotide sequence analysis
-
K Nakamura H Ishida T Iizumi 2000 Constitutive trichloroethylene degradation led by tac promoter chromosomally integrated upstream of phenol hydroxylase genes of Ralstonia sp. KN1 and its nucleotide sequence analysis J Biosci Bioeng 89 47 54
-
(2000)
J Biosci Bioeng
, vol.89
, pp. 47-54
-
-
Nakamura, K.1
Ishida, H.2
Iizumi, T.3
-
25
-
-
0028597452
-
Cloning and sequences of the first eight genes of the chromosomally encoded (methyl) phenol degradation pathway from Pseudomonas putida P35X
-
LC Ng V Shingler CC Sze CL Poh 1994 Cloning and sequences of the first eight genes of the chromosomally encoded (methyl) phenol degradation pathway from Pseudomonas putida P35X Gene 151 29 36
-
(1994)
Gene
, vol.151
, pp. 29-36
-
-
Ng, L.C.1
Shingler, V.2
Sze, C.C.3
Poh, C.L.4
-
26
-
-
2142659318
-
Divergence of mobile genetic elements involved in the distribution of xenobiotic-catabolic capacity
-
H Nojiri M Shintani T Omori 2004 Divergence of mobile genetic elements involved in the distribution of xenobiotic-catabolic capacity Appl Microbiol Biotechnol 64 154 174
-
(2004)
Appl Microbiol Biotechnol
, vol.64
, pp. 154-174
-
-
Nojiri, H.1
Shintani, M.2
Omori, T.3
-
27
-
-
0025602269
-
Complete nucleotide sequence and polypeptide analysis of multicomponent phenol hydroxylase from Pseudomonas sp. strain CF600
-
I Nordlund J Powlowski V Shingler 1990 Complete nucleotide sequence and polypeptide analysis of multicomponent phenol hydroxylase from Pseudomonas sp. strain CF600 J Bacteriol 172 6826 6833
-
(1990)
J Bacteriol
, vol.172
, pp. 6826-6833
-
-
Nordlund, I.1
Powlowski, J.2
Shingler, V.3
-
28
-
-
0030780752
-
Acquisition of a deliberately introduced phenol degradation operon, pheBA, by different indigenous Pseudomonas species
-
M Peters E Heinaru E Talpsep H Wand U Stottmeister A Heinaru A Nurk 1997 Acquisition of a deliberately introduced phenol degradation operon, pheBA, by different indigenous Pseudomonas species Appl Environ Microbiol 63 4899 4906
-
(1997)
Appl Environ Microbiol
, vol.63
, pp. 4899-4906
-
-
Peters, M.1
Heinaru, E.2
Talpsep, E.3
Wand, H.4
Stottmeister, U.5
Heinaru, A.6
Nurk, A.7
-
29
-
-
0027308193
-
In vivo reactivation of catechol 2,3-dioxygenase mediated by a chloroplast-type ferredoxin: A bacterial strategy to expand the substrate specificity of aromatic degradative pathways
-
A Polissi S Harayama 1993 In vivo reactivation of catechol 2,3-dioxygenase mediated by a chloroplast-type ferredoxin: a bacterial strategy to expand the substrate specificity of aromatic degradative pathways EMBO J 12 3339 3347
-
(1993)
EMBO J
, vol.12
, pp. 3339-3347
-
-
Polissi, A.1
Harayama, S.2
-
30
-
-
20444397103
-
Alcaligenes faecalis subsp. phenolicus subsp. nov. a phenol-degrading, denitrifying bacterium isolated from a graywater bioprocessor
-
M Rehfuss J Urban 2005 Alcaligenes faecalis subsp. phenolicus subsp. nov. a phenol-degrading, denitrifying bacterium isolated from a graywater bioprocessor Syst Appl Microbiol 28 421 429
-
(2005)
Syst Appl Microbiol
, vol.28
, pp. 421-429
-
-
Rehfuss, M.1
Urban, J.2
-
31
-
-
0004136246
-
-
2 Cold Spring Harbor Laboratory Press Cold Spring Harbor, New York
-
Sambrook J, Fritsch EF, Maniatis T (1989) Molecular cloning: a laboratory manual, 2nd edn, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York
-
(1989)
Molecular Cloning: A Laboratory Manual
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
32
-
-
34648825385
-
Characterization of the unique organization and co-regulation of a gene cluster required for phenol and benzene catabolism in Pseudomonas sp. M1
-
PM Santos I Sá-Correia 2007 Characterization of the unique organization and co-regulation of a gene cluster required for phenol and benzene catabolism in Pseudomonas sp. M1 J Biotechnol 131 371 378
-
(2007)
J Biotechnol
, vol.131
, pp. 371-378
-
-
Santos, P.M.1
Sá-Correia, I.2
-
33
-
-
0026567783
-
Nucleotide sequence and functional analysis of the complete phenol/3,4-dimethylphenol catabolic pathway of Pseudomonas sp. strain CF600
-
V Shingler J Powlowski U Marklund 1992 Nucleotide sequence and functional analysis of the complete phenol/3,4-dimethylphenol catabolic pathway of Pseudomonas sp. strain CF600 J Bacteriol 174 711 724
-
(1992)
J Bacteriol
, vol.174
, pp. 711-724
-
-
Shingler, V.1
Powlowski, J.2
Marklund, U.3
-
36
-
-
33751006158
-
Characterization of alkylphenol degradation gene cluster in Pseudomonas putida MT4 and evidence of oxidation of alkylphenols and alkylcatechols with medium-length alkyl chain
-
M Takeo SK Prabu C Kitamura M Hirai H Takahashi D Kato S Negoro 2006 Characterization of alkylphenol degradation gene cluster in Pseudomonas putida MT4 and evidence of oxidation of alkylphenols and alkylcatechols with medium-length alkyl chain J Biosci Bioeng 102 352 361
-
(2006)
J Biosci Bioeng
, vol.102
, pp. 352-361
-
-
Takeo, M.1
Prabu, S.K.2
Kitamura, C.3
Hirai, M.4
Takahashi, H.5
Kato, D.6
Negoro, S.7
-
37
-
-
0032898995
-
Bacterial catabolic transposons
-
HM Tan 1999 Bacterial catabolic transposons Appl Microbiol Biotechnol 51 1 12
-
(1999)
Appl Microbiol Biotechnol
, vol.51
, pp. 1-12
-
-
Tan, H.M.1
-
38
-
-
0032695056
-
Characterization of a high-affinity phenol hydroxylase from Comamonas testosteroni R5 by gene cloning, and expression in Pseudomonas aeruginosa PAO1c
-
M Teramoto H Futamata S Harayama K Watanabe 1999 Characterization of a high-affinity phenol hydroxylase from Comamonas testosteroni R5 by gene cloning, and expression in Pseudomonas aeruginosa PAO1c Mol Gen Genet 262 552 558
-
(1999)
Mol Gen Genet
, vol.262
, pp. 552-558
-
-
Teramoto, M.1
Futamata, H.2
Harayama, S.3
Watanabe, K.4
-
39
-
-
0031574072
-
The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
JD Thompson TJ Gibson F Plewniak F Jeanmougin DG Higgins 1997 The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools Nucleic Acids Res 25 4876 4882
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
40
-
-
0038820052
-
The role of mobile genetic elements in bacterial adaptation to xenobiotic organic compounds
-
EM Top D Springael 2003 The role of mobile genetic elements in bacterial adaptation to xenobiotic organic compounds Curr Opin Biotechnol 14 262 269
-
(2003)
Curr Opin Biotechnol
, vol.14
, pp. 262-269
-
-
Top, E.M.1
Springael, D.2
-
41
-
-
0036419477
-
Understanding the diversity in catabolic potential of microorganisms for the development of bioremediation strategies
-
K Watanabe H Futamata S Harayama 2002 Understanding the diversity in catabolic potential of microorganisms for the development of bioremediation strategies Antonie Van Leeuwenhoek 81 655 663
-
(2002)
Antonie Van Leeuwenhoek
, vol.81
, pp. 655-663
-
-
Watanabe, K.1
Futamata, H.2
Harayama, S.3
-
43
-
-
0031734089
-
Molecular detection, isolation, and physiological characterization of functionally dominant phenol-degrading bacteria in activated sludge
-
K Watanabe M Teramoto H Futamata S Harayama 1998 Molecular detection, isolation, and physiological characterization of functionally dominant phenol-degrading bacteria in activated sludge Appl Environ Microbiol 64 4396 4402
-
(1998)
Appl Environ Microbiol
, vol.64
, pp. 4396-4402
-
-
Watanabe, K.1
Teramoto, M.2
Futamata, H.3
Harayama, S.4
-
44
-
-
0038481531
-
Genetic organization of genes encoding phenol hydroxylase, benzoate 1,2-dioxygenase alpha subunit and its regulatory proteins in Acinetobacter calcoaceticus PHEA-2
-
Y Xu M Chen W Zhang M Lin 2003 Genetic organization of genes encoding phenol hydroxylase, benzoate 1,2-dioxygenase alpha subunit and its regulatory proteins in Acinetobacter calcoaceticus PHEA-2 Curr Microbiol 46 235 240
-
(2003)
Curr Microbiol
, vol.46
, pp. 235-240
-
-
Xu, Y.1
Chen, M.2
Zhang, W.3
Lin, M.4
-
45
-
-
4143111277
-
Microdiversity of phenol hydroxylase genes among phenol-degrading isolates of Alcaligenes sp. from an activated sludge system
-
X Zhang P Gao Q Chao L Wang E Senior L Zhao 2004 Microdiversity of phenol hydroxylase genes among phenol-degrading isolates of Alcaligenes sp. from an activated sludge system FEMS Microbiol Lett 237 369 375
-
(2004)
FEMS Microbiol Lett
, vol.237
, pp. 369-375
-
-
Zhang, X.1
Gao, P.2
Chao, Q.3
Wang, L.4
Senior, E.5
Zhao, L.6
-
46
-
-
1842844870
-
Cloning and sequencing of a phenol hydroxylase gene of Pseudomonas pseudoalcaligenes strain MH1: A bacterium able to mineralize various aromatic compounds
-
H Zouari S Moukha M Labat S Sayadi 2002 Cloning and sequencing of a phenol hydroxylase gene of Pseudomonas pseudoalcaligenes strain MH1: a bacterium able to mineralize various aromatic compounds Appl Biochem Biotechnol 102-103 261 276
-
(2002)
Appl Biochem Biotechnol
, vol.102-103
, pp. 261-276
-
-
Zouari, H.1
Moukha, S.2
Labat, M.3
Sayadi, S.4
|