-
1
-
-
0031733597
-
Adaptation of Comamonas testosteroni TA441 to utilize phenol : Organization and regulation of the genes involved in phenol degradation
-
Arai, H., Akahira, S., Ohishi, T., Maeda, M. & Kudo, T. (1998). Adaptation of Comamonas testosteroni TA441 to utilize phenol : organization and regulation of the genes involved in phenol degradation. Microbiology 144, 2895-2903.
-
(1998)
Microbiology
, vol.144
, pp. 2895-2903
-
-
Arai, H.1
Akahira, S.2
Ohishi, T.3
Maeda, M.4
Kudo, T.5
-
2
-
-
0032825377
-
Adaptation of Comamonas testosterone TA441 to utilization of phenol by spontaneous mutation of the gene for a trans-acting factor
-
Arai, H., Akahira, S., Ohishi, T. & Kudo, T. (1999a). Adaptation of Comamonas testosterone TA441 to utilization of phenol by spontaneous mutation of the gene for a trans-acting factor. Mol Microbiol 33, 1132-1140.
-
(1999)
Mol Microbiol
, vol.33
, pp. 1132-1140
-
-
Arai, H.1
Akahira, S.2
Ohishi, T.3
Kudo, T.4
-
3
-
-
0032866061
-
Genetic organization and characteristics of the 3-(3-hydroxyphenyl)propionic acid degradation pathway from Comamonas testosteroni TA441
-
Arai, H., Yamamoto, T., Ohishi, T., Shimizu,T., Nakata, T. & Kudo, T. (1999b). Genetic organization and characteristics of the 3-(3-hydroxyphenyl)propionic acid degradation pathway from Comamonas testosteroni TA441. Microbiology 145, 2813-2820.
-
(1999)
Microbiology
, vol.145
, pp. 2813-2820
-
-
Arai, H.1
Yamamoto, T.2
Ohishi, T.3
Nakata, T.4
Kudo, T.5
-
4
-
-
0017184389
-
A rapid and sensitive method for the quantisation of microgram quantities of prorein utilizing the principle of protein-dye binding
-
Bradford, M. M. (1976). A rapid and sensitive method for the quantisation of microgram quantities of prorein utilizing the principle of protein-dye binding. Anal Biochem 72, 248-254.
-
(1976)
Anal Biochem
, vol.72
, pp. 248-254
-
-
Bradford, M.M.1
-
5
-
-
0027389217
-
Nucleotide sequence and initial functional characterization of the clcR gene encoding a LysR family activator of the clcABD chlorocatechol opcron in Pseudomonas putida
-
Coco, W. M., Rothmel, R. K., Henikoff, S. & Chakrabarty, A. M. (1993). Nucleotide sequence and initial functional characterization of the clcR gene encoding a LysR family activator of the clcABD chlorocatechol opcron in Pseudomonas putida. J Bacteriol 175, 417-427.
-
(1993)
J Bacteriol
, vol.175
, pp. 417-427
-
-
Coco, W.M.1
Rothmel, R.K.2
Henikoff, S.3
Chakrabarty, A.M.4
-
6
-
-
0029083167
-
Biochemical and molecular characterization of the oxidative branch of glycerol utilization by Citrobacter freundii
-
Daniel, R., Stuertz, K. & Gottschalk, G (1995). Biochemical and molecular characterization of the oxidative branch of glycerol utilization by Citrobacter freundii. J Bacteriol 177, 4392-4401.
-
(1995)
J Bacteriol
, vol.177
, pp. 4392-4401
-
-
Daniel, R.1
Stuertz, K.2
Gottschalk, G.3
-
7
-
-
0026766452
-
Nucleotide sequencing and transcriptional mapping of genes encoding biphenyl dioxygenase, a multicomponent PCB-degrading enzyme in Pseudomonas strain LB400
-
Erickson, B. D. & Mondello, F. J. (1992). Nucleotide sequencing and transcriptional mapping of genes encoding biphenyl dioxygenase, a multicomponent PCB-degrading enzyme in Pseudomonas strain LB400. J Bacteriol 174, 2903-1912.
-
(1992)
J Bacteriol
, vol.174
, pp. 2903-11912
-
-
Erickson, B.D.1
Mondello, F.J.2
-
8
-
-
0023374169
-
Organization and nucleotide sequence determination of a gene cluster involved in 3-chlorocatechol degradation
-
Frantz, B. & Chakrabarty, A. M. (1987). Organization and nucleotide sequence determination of a gene cluster involved in 3-chlorocatechol degradation. Proc Natl Acad Sci USA 84, 4460-4464.
-
(1987)
Proc Natl Acad Sci USA
, vol.84
, pp. 4460-4464
-
-
Frantz, B.1
Chakrabarty, A.M.2
-
9
-
-
0032942360
-
NahY, a catabolic plasmid-encoding receptor required for chemotaxis of Pseudomonas putida to the aromatic hydrocarbon naphthalene
-
Grimm, A. C. & Harwood, C. S.(1999). NahY, a catabolic plasmid-encoding receptor required for chemotaxis of Pseudomonas putida to the aromatic hydrocarbon naphthalene. J Bacteriol 181, 3310-3316.
-
(1999)
J Bacteriol
, vol.181
, pp. 3310-3316
-
-
Grimm, A.C.1
Harwood, C.S.2
-
10
-
-
0025318026
-
The meta cleavage operon of TOL degradative plasmid pWWO comprises 13 genes
-
Harayama, S. & Rekik, M. (1990). The meta cleavage operon of TOL degradative plasmid pWWO comprises 13 genes. Mol Gen Genet 221, 113-120.
-
(1990)
Mol Gen Genet
, vol.221
, pp. 113-120
-
-
Harayama, S.1
Rekik, M.2
-
11
-
-
0024457019
-
Physically associated enzymes produce and metabolize 2-hydroxypent-2,4-dienoate, a chemically unstable intermediate formed in catechol metabolism via meta cleavage in Pseudomonas putida
-
Harayama, S., Rekik, M., Ngai, K.-L. &Ornston, L. N. (1989). Physically associated enzymes produce and metabolize 2-hydroxypent-2,4-dienoate, a chemically unstable intermediate formed in catechol metabolism via meta cleavage in Pseudomonas putida. J Bacteriol 171, 6251-6258.
-
(1989)
J Bacteriol
, vol.171
, pp. 6251-6258
-
-
Harayama, S.1
Rekik, M.2
Ngai, K.-L.3
Ornston, L.N.4
-
12
-
-
0027968260
-
Sequence and expression of the todGIH genes involved in the last three steps of toluene degradation by Pseudomonas putida F1
-
Lau, P. C., Bergeron, H., Labbe, D., Wang, Y., Brousseau, R. & Gibson, D. T. (1994). Sequence and expression of the todGIH genes involved in the last three steps of toluene degradation by Pseudomonas putida F1. Gene 146, 7-13.
-
(1994)
Gene
, vol.146
, pp. 7-13
-
-
Lau, P.C.1
Bergeron, H.2
Labbe, D.3
Wang, Y.4
Brousseau, R.5
Gibson, D.T.6
-
13
-
-
0025707308
-
Comparison of promoter activities in Escherichia coli and Pseudomonas aeruginosa: Use of a new broad-host-range promoter-probe plasmid
-
Lodge, J., Williams, R., Bell, A., Chan, B. & Busby, S. (1990). Comparison of promoter activities in Escherichia coli and Pseudomonas aeruginosa: use of a new broad-host-range promoter-probe plasmid. FEMS Microbiol Lett 67, 221-226.
-
(1990)
FEMS Microbiol Lett
, vol.67
, pp. 221-226
-
-
Lodge, J.1
Williams, R.2
Bell, A.3
Chan, B.4
Busby, S.5
-
14
-
-
0030974367
-
2-Chloromuconate and ClcR-mediated activation of the clcABC. Operon : In vitro transcriptional and DNase I footprint analyses
-
McFall, S. M., Parsek, M. R. & Chakrabarty, A. M. (1997). 2-Chloromuconate and ClcR-mediated activation of the clcABC. operon : in vitro transcriptional and DNase I footprint analyses. J Bacteriol 179, 3655-3663.
-
(1997)
J Bacteriol
, vol.179
, pp. 3655-3663
-
-
McFall, S.M.1
Parsek, M.R.2
Chakrabarty, A.M.3
-
15
-
-
0032570608
-
Characterisation of the urease gene cluster in Bordetella bronchiseptica
-
McMillan, D. J., Mau, M. & Walker, M. J. (1998). Characterisation of the urease gene cluster in Bordetella bronchiseptica. Gene 208, 243-251.
-
(1998)
Gene
, vol.208
, pp. 243-251
-
-
McMillan, D.J.1
Mau, M.2
Walker, M.J.3
-
16
-
-
0033064439
-
Conversion of 3-chlorocatechol by various catechol 2,3-dioxygenases and sequence analysis of the chlorocatechol dioxygenase region of Pseudomonas putida GJ31
-
Mars, A. E., Kingma, J., Kaschabek, S. R., Reineke, W. & Janssen, D. B. (1999). Conversion of 3-chlorocatechol by various catechol 2,3-dioxygenases and sequence analysis of the chlorocatechol dioxygenase region of Pseudomonas putida GJ31. J Bacteriol 181, 1309-1318.
-
(1999)
J Bacteriol
, vol.181
, pp. 1309-1318
-
-
Mars, A.E.1
Kingma, J.2
Kaschabek, S.R.3
Reineke, W.4
Janssen, D.B.5
-
17
-
-
0025806414
-
Sequence analysis of the Pseudomonas sp. strain P51 tcb gene cluster, which encodes metabolism of chlorinated catechols: Evidence for specialization of catechol 1,2-dioxygenases for chlorinated substrates
-
van der Meer, J. R., Eggen, R. I., Zehnder, A. J. & de Vos, W. M. (1991a). Sequence analysis of the Pseudomonas sp. strain P51 tcb gene cluster, which encodes metabolism of chlorinated catechols: evidence for specialization of catechol 1,2-dioxygenases for chlorinated substrates. J Bacteriol 173, 2425-2434.
-
(1991)
J Bacteriol
, vol.173
, pp. 2425-2434
-
-
Van Der Meer, J.R.1
Eggen, R.I.2
Zehnder, A.J.3
De Vos, W.M.4
-
18
-
-
0025740524
-
Characterization of the Pseudomonas sp. strain P5I gene tcbR, a LysR-type transcriptional activator of the tcbCDEF chlorocatechol oxidative operon, and analysis of the regulatory region
-
van der Meer, J. R., Frijters, A. C., Leveau, J. H., Eggen, R. I., Zehnder, A. J. & de Vos, W. M. (1991b). Characterization of the Pseudomonas sp. strain P5I gene tcbR, a LysR-type transcriptional activator of the tcbCDEF chlorocatechol oxidative operon, and analysis of the regulatory region. J Bacteriol 173, 3700-3708.
-
(1991)
J Bacteriol
, vol.173
, pp. 3700-3708
-
-
Van Der Meer, J.R.1
Frijters, A.C.2
Leveau, J.H.3
Eggen, R.I.4
Zehnder, A.J.5
De Vos, W.M.6
-
20
-
-
0030955228
-
Testosterone-regulated expression of enzymes in volved in steroid and aromatic hydrocarbon catabolism in Comamonas testosteroni
-
Möbus, Jahn, M., Schmid, R., Jahn, D. & Maser, E. (1997). Testosterone-regulated expression of enzymes in volved in steroid and aromatic hydrocarbon catabolism in Comamonas testosteroni. J Bacteriol 179, 5951-5955.
-
(1997)
J Bacteriol
, vol.179
, pp. 5951-5955
-
-
Möbus, E.1
Jahn, M.2
Schmid, R.3
Jahn, D.4
Maser, E.5
-
21
-
-
0031454105
-
Cloning and sequence analysis of a catechol 2,3-dioxygenase gene from the nitrobenzene-degrading strain Comamonas sp. JS765
-
Parales, R. E., Ontl, T. A. & Gibson, D. T. (1997). Cloning and sequence analysis of a catechol 2,3-dioxygenase gene from the nitrobenzene-degrading strain Comamonas sp. JS765. J Ind Microbiol Biotechnol 19, 385-391.
-
(1997)
J Ind Microbiol Biotechnol
, vol.19
, pp. 385-391
-
-
Parales, R.E.1
Ontl, T.A.2
Gibson, D.T.3
-
22
-
-
0026495342
-
Roles of CatR and cis,cis-muconate in activation of the CatRC operon, which is involved in benzoate degradation in Pseudomonas putida
-
Parsek, M. E., Shinabarger, D. L., Rothmel, R. K. & Chakrabarty, A. M. (1992). Roles of CatR and cis,cis-muconate in activation of the CatRC operon, which is involved in benzoate degradation in Pseudomonas putida. J Bacteriol 174, 7798-7806.
-
(1992)
J Bacteriol
, vol.174
, pp. 7798-7806
-
-
Parsek, M.E.1
Shinabarger, D.L.2
Rothmel, R.K.3
Chakrabarty, A.M.4
-
23
-
-
0028672047
-
Genetics and biochemistry of phenol degradation by Peudomonas sp. CH600
-
Powlowski, J. & Shingler, V. (1994). Genetics and biochemistry of phenol degradation by Peudomonas sp. CH600. Biodegradation 5, 219-236.
-
(1994)
Biodegradation
, vol.5
, pp. 219-236
-
-
Powlowski, J.1
Shingler, V.2
-
24
-
-
0025139202
-
Nucleotide sequencing and characterization of Pseudomonas putida catR: A positive regulator of the catBC operon is a member of the lysR family
-
Rothmel, R. K., Aldrich, T. L., Houghton, J. E., Coco, W. M., Ornston, L. N. & Chakrabarty, A. M. (1990). Nucleotide sequencing and characterization of Pseudomonas putida catR: a positive regulator of the catBC operon is a member of the lysR family. J Bacteriol 172, 922-931.
-
(1990)
J Bacteriol
, vol.172
, pp. 922-931
-
-
Rothmel, R.K.1
Aldrich, T.L.2
Houghton, J.E.3
Coco, W.M.4
Ornston, L.N.5
Chakrabarty, A.M.6
-
25
-
-
0030198501
-
Characterization and distribution of tartrate utilization genes in the grapevine pathogen Agrobacterinm vitis
-
Salomone, J.-Y., Crouzet, P., De Ruffray, P. & Otten, L. (1996). Characterization and distribution of tartrate utilization genes in the grapevine pathogen Agrobacterinm vitis. Mol Plant-Microbe Interact 9, 401-408.
-
(1996)
Mol Plant-Microbe Interact
, vol.9
, pp. 401-408
-
-
Salomone, J.-Y.1
Crouzet, P.2
De Ruffray, P.3
Otten, L.4
-
26
-
-
0003903343
-
-
Cold Spring Harbor, NY: Cold Spring Harbor Laboratory
-
Sambrook, J., Fritsch, E. F. & Maniatis, T. (1989). Molecular Cloning: a Laboratory Manual, 2nd edn. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory.
-
(1989)
Molecular Cloning: A Laboratory Manual, 2nd Edn.
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
27
-
-
0000276955
-
Metabolic and regulatory cheek points in phenol degradation by Pseudomonas sp. CF600
-
Edited by T. Nakazawa, K. Furukawa, D. Haas & S. Silver. Washington, DC: American Society for Microbiology
-
Shingler, V. (1996). Metabolic and regulatory cheek points in phenol degradation by Pseudomonas sp. CF600. In Molecular Biology of Pseudomonas, pp. 153-154. Edited by T. Nakazawa, K. Furukawa, D. Haas & S. Silver. Washington, DC: American Society for Microbiology.
-
(1996)
Molecular Biology of Pseudomonas
, pp. 153-154
-
-
Shingler, V.1
-
28
-
-
0026567783
-
Nucleotide sequence and functional analysis of the complete phenol/3,4-dimethylphenol catabolic pathway of Pseudomonas sp. strain CF600
-
Shingler, V., Powlowski, J. & Marklund, U. (1992). Nucleotide sequence and functional analysis of the complete phenol/3,4-dimethylphenol catabolic pathway of Pseudomonas sp. strain CF600. J Bacteriol 174, 711-724.
-
(1992)
J Bacteriol
, vol.174
, pp. 711-724
-
-
Shingler, V.1
Powlowski, J.2
Marklund, U.3
-
29
-
-
0027400541
-
Cloning and nucleotide sequence of the gene encoding the positive regulator (DmpR) of the phenol catabolic pathway encoded by pVII50 and identification of DmpR as a member of the NtrC family of transcriptional activators
-
Shingler, V., Bartilson, M. & Moore, T. (1993). Cloning and nucleotide sequence of the gene encoding the positive regulator (DmpR) of the phenol catabolic pathway encoded by pVII50 and identification of DmpR as a member of the NtrC family of transcriptional activators. J Bacteriol 175, 1596-1604.
-
(1993)
J Bacteriol
, vol.175
, pp. 1596-1604
-
-
Shingler, V.1
Bartilson, M.2
Moore, T.3
-
30
-
-
0021205685
-
High frequency mobilization of gram-negative bacterial replicons by the in vitro constructed Tn5-Mob transposon
-
Simon, R. (1984). High frequency mobilization of gram-negative bacterial replicons by the in vitro constructed Tn5-Mob transposon. Mol Gen Genet 196, 413-420.
-
(1984)
Mol Gen Genet
, vol.196
, pp. 413-420
-
-
Simon, R.1
-
31
-
-
0023191349
-
Analysis, cloning, and high-level expression of 2,4-dichlorophenoxyacetate monooxygenase gene tfdA of Alcaligenes eutrophus JMPI34
-
Streber, W. R., Timmis, K. N. & Zenk, M. H. (1987). Analysis, cloning, and high-level expression of 2,4-dichlorophenoxyacetate monooxygenase gene tfdA of Alcaligenes eutrophus JMPI34. J Bactteriol 169, 2950-2955.
-
(1987)
J Bactteriol
, vol.169
, pp. 2950-2955
-
-
Streber, W.R.1
Timmis, K.N.2
Zenk, M.H.3
-
32
-
-
0028840131
-
Metabolic pathway for biosynthesis of poly(3-hydroxybutyrate-co-4-hydro,\ybutyrate) from 4-hydroxyhutyrate by Alcaligenes entrophus
-
Valentin, H. E., Zwingmann, G., Schonebaum, A. & Steinbüchel, A. (1995). Metabolic pathway for biosynthesis of poly(3-hydroxybutyrate-co-4-hydro,\ybutyrate) from 4-hydroxyhutyrate by Alcaligenes entrophus. Eur J Biochem 227, 43-60.
-
(1995)
Eur J Biochem
, vol.227
, pp. 43-60
-
-
Valentin, H.E.1
Zwingmann, G.2
Schonebaum, A.3
Steinbüchel, A.4
-
33
-
-
0016214823
-
Pseudomoiuis pntida mutants defective in metabolism of the products of metafission of catechol and its methyl analogues
-
Wigmore, H. J., Bayly, R. C. & Berardino, D. (1974). Pseudomoiuis pntida mutants defective in metabolism of the products of metafission of catechol and its methyl analogues. J Bacteriol 120, 31-37.
-
(1974)
J Bacteriol
, vol.120
, pp. 31-37
-
-
Wigmore, H.J.1
Bayly, R.C.2
Berardino, D.3
-
34
-
-
0342872072
-
Novel organization of catechol meta-pathway genes in Sphingainontis sp. HV3 pSKY4 plasmid
-
Yrjälä, K., Paulin, L. & Romantschuk, M. (1997). Novel organization of catechol meta-pathway genes in Sphingainontis sp. HV3 pSKY4 plasmid. FEMS Microbiol Lett 154, 403-408.
-
(1997)
FEMS Microbiol Lett
, vol.154
, pp. 403-408
-
-
Yrjälä, K.1
Paulin, L.2
Romantschuk, M.3
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