Transforming growth factor-beta-mediated regulation of BK virus gene expression

Virology

Volumn 378, Issue 1, 2008, Pages 6-12

  Abend, Johanna R ^a   Imperiale, Michael J ^a  

^a UNIVERSITY OF MICHIGAN MEDICAL SCHOOL   (United States)

Author keywords

BK virus; Polyomavirus; Smad3; TGF

Indexed keywords

TRANSFORMING GROWTH FACTOR BETA;

ARTICLE; BK VIRUS; CONTROLLED STUDY; EPITHELIUM CELL; GENE CONTROL; GENE EXPRESSION; HUMAN; HUMAN CELL; IMMUNOSUPPRESSIVE TREATMENT; KIDNEY PROXIMAL TUBULE; KIDNEY TRANSPLANTATION; KIDNEY TUBULE EPITHELIUM; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN FUNCTION; REGULATORY MECHANISM; SITE DIRECTED MUTAGENESIS; UPREGULATION; VIRUS GENE; VIRUS REACTIVATION; VIRUS STRAIN;

BASE SEQUENCE; BK VIRUS; CELLS, CULTURED; EPITHELIAL CELLS; GENE EXPRESSION REGULATION, VIRAL; HUMANS; KIDNEY TUBULES, PROXIMAL; MOLECULAR SEQUENCE DATA; PROMOTER REGIONS (GENETICS); SMAD3 PROTEIN; TRANSFORMING GROWTH FACTOR BETA; VIRAL PROTEINS;

BK POLYOMAVIRUS; POLYOMAVIRUS;

EID: 47949125223     PISSN: 00426822     EISSN: 10960341     Source Type: Journal    
DOI: 10.1016/j.virol.2008.05.009     Document Type: Article

References (57)

1. Abend J.R., Low J.A., and Imperiale M.J. Inhibitory effect of gamma interferon on BK virus gene expression and replication. J. Virol. 81 (2007) 272-279
2. Bedi A., Miller C.B., Hanson J.L., Goodman S., Ambinder R.F., Charache P., Arthur R.R., and Jones R.J. Association of BK virus with failure of prophylaxis against hemorrhagic following bone marrow transplantation. J. Clin. Oncol. 13 (1995) 1103-1109
3. Boldorini R., Omodeo-Zorini E., Suno A., Benigni E., Nebuloni M., Garino E., Fortunato M., Monga G., and Mazzucco G. Molecular characterization and sequence analysis of polyomavirus strains isolated from needle biopsy specimens of kidney allograft recipients. Am. J. Clin. Pathol. 116 (2001) 489-494
4. Brown K.A., Pietenpol J.A., and Moses H.L. A tale of two proteins: differential roles and regulation of Smad2 and Smad3 in TGF-beta signaling. J. Cell Biochem. 101 (2007) 9-33
5. Cartharius K., Frech K., Grote K., Klocke B., Haltmeier M., Klingenhoff A., Frisch M., Bayerlein M., and Werner T. MatInspector and beyond: promoter analysis based on transcription factor binding sites. Bioinformatics 21 (2005) 2933-2942
6. Chatterjee M., Weyandt T.B., and Frisque R.J. Identification of archetype and rearranged forms of BK virus in leukocytes from healthy individuals. J. Med. Virol. 60 (2000) 353-362
7. Chesters P.M., Heritage J., and McCance D.J. Persistence of DNA sequences of BK virus and JC virus in normal human tissues and in diseased tissues. J. Infect. Dis. 147 (1983) 676-684
8. Comoli P., Binggeli S., Ginevri F., and Hirsch H.H. Polyomavirus-associated nephropathy: update on BK virus-specific immunity. Transpl. Infect Dis. 8 (2006) 86-94
9. Cubitt C.L. Molecular genetics of the BK virus. Adv. Exp. Med. Biol. 577 (2006) 85-95
10. di Renzo L., Altiok A., Klein G., and Klein E. Endogenous TGF-beta contributes to the induction of the EBV lytic cycle in two Burkitt lymphoma cell lines. Int. J. Cancer 57 (1994) 914-919
11. Doerries K. Human polyomavirus JC and BK persistent infection. Adv. Exp. Med. Biol. 577 (2006) 102-116
12. Doerries K., Vogel E., Gunther S., and Czub S. Infection of human polyomaviruses JC and BK in peripheral blood leukocytes from immunocompetent individuals. Virology 198 (1994) 59-70
13. Elsner C., and Doerries K. Evidence of human polyomavirus BK and JC infection in normal brain tissue. Virology 191 (1992) 72-80
14. Enam S., Sweet T.M., Amini S., Khalili K., and Del Valle L. Evidence for involvement of transforming growth factor beta1 signaling pathway in activation of JC virus in human immunodeficiency virus 1-associated progressive multifocal leukoencephalopathy. Arch. Pathol. Lab. Med. 128 (2004) 282-291
15. Feng X.H., and Derynck R. Specificity and versatility in TGF-beta signaling through Smads. Annu. Rev. Cell Dev. Biol. 21 (2005) 659-693
16. Fukuda M., Ikuta K., Yanagihara K., Tajima M., Kuratsune H., Kurata T., and Sairenji T. Effect of transforming growth factor-beta1 on the cell growth and Epstein-Barr virus reactivation in EBV-infected epithelial cell lines. Virology 288 (2001) 109-118
17. Gardner S.D., Field A.M., Coleman D.V., and Hulme B. New human papovavirus (B.K.) isolated from urine after renal transplantation. Lancet 1 (1971) 1253-1257
18. Gosert R., Rinaldo C.H., Funk G.A., Egli A., Ramos E., Drachenberg C.B., and Hirsch H.H. Polyomavirus BK with rearranged noncoding control region emerge in vivo in renal transplant patients and increase viral replication and cytopathology. J. Exp. Med. 205 (2008) 841-852
19. Goudsmit J., Wertheim-van Dillen P., van Strien A., and van der Noordaa J. The role of BK virus in acute respiratory tract disease and the presence of BKV DNA in tonsils. J. Med. Virol. 10 (1982) 91-99
20. Harlow E., Whyte P., Franza Jr. B.R., and Schley C. Association of adenovirus early-region 1A proteins with cellular polypeptides. Mol. Cell Biol. 6 (1986) 1579-1589
21. Heritage J., Chesters P.M., and McCance D.J. The persistence of papovavirus BK DNA sequences in normal human renal tissue. J. Med. Virol. 8 (1981) 143-150
22. Hirsch H.H., Drachenberg C.B., Steiger J., and Ramos E. Polyomavirus-associated nephropathy in renal transplantation: critical issues of screening and management. Adv. Exp. Med. Biol. 577 (2006) 160-173
23. Jonk L.J., Itoh S., Heldin C.H., ten Dijke P., and Kruijer W. Identification and functional characterization of a Smad binding element (SBE) in the JunB promoter that acts as a transforming growth factor-beta, activin, and bone morphogenetic protein-inducible enhancer. J. Biol. Chem. 273 (1998) 21145-21152
24. Josephson M.A., Williams J.W., Chandraker A., and Randhawa P.S. Polyomavirus-associated nephropathy: update on antiviral strategies. Transpl. Infect Dis. 8 (2006) 95-101
25. Khanna A., Cairns V., and Hosenpud J.D. Tacrolimus induces increased expression of transforming growth factor-beta1 in mammalian lymphoid as well as nonlymphoid cells. Transplantation 67 (1999) 614-619
26. Khanna A.K., Cairns V.R., Becker C.G., and Hosenpud J.D. Transforming growth factor (TGF)-beta mimics and anti-TGF-beta antibody abrogates the in vivo effects of cyclosporine: demonstration of a direct role of TGF-beta in immunosuppression and nephrotoxicity of cyclosporine. Transplantation 67 (1999) 882-889
27. Knowles W.A. Discovery and epidemiology of the human polyomaviruses BK virus (BKV) and JC virus (JCV). Adv. Exp. Med. Biol. 577 (2006) 19-45
28. Li M.O., Wan Y.Y., Sanjabi S., Robertson A.K., and Flavell R.A. Transforming growth factor-beta regulation of immune responses. Annu. Rev. Immunol. 24 (2006) 99-146
29. Livak K.J., and Schmittgen T.D. Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) method. Methods 25 (2001) 402-408
30. Markowitz R.B., and Dynan W.S. Binding of cellular proteins to the regulatory region of BK virus DNA. J. Virol. 62 (1988) 3388-3398
31. Markowitz R.B., Eaton B.A., Kubik M.F., Latorra D., McGregor J.A., and Dynan W.S. BK virus and JC virus shed during pregnancy have predominantly archetypal regulatory regions. J. Virol. 65 (1991) 4515-4519
32. Massague J., and Wotton D. Transcriptional control by the TGF-beta/Smad signaling system. EMBO J 19 (2000) 1745-1754
33. Massague J., Seoane J., and Wotton D. Smad transcription factors. Genes Dev. 19 (2005) 2783-2810
34. McMorrow T., Gaffney M.M., Slattery C., Campbell E., and Ryan M.P. Cyclosporine A induced epithelial-mesenchymal transition in human renal proximal tubular epithelial cells. Nephrol. Dial. Transplant 20 (2005) 2215-2225
35. Moens U., and Van Ghelue M. Polymorphism in the genome of non-passaged human polyomavirus BK: implications for cell tropism and the pathological role of the virus. Virology 331 (2005) 209-231
36. Moens U., Johansen T., Johnsen J.I., Seternes O.M., and Traavik T. Noncoding control region of naturally occurring BK virus variants: sequence comparison and functional analysis. Virus Genes 10 (1995) 261-275
37. Negrini M., Sabbioni S., Arthur R.R., Castagnoli A., and Barbanti-Brodano G. Prevalence of the archetypal regulatory region and sequence polymorphisms in nonpassaged BK virus variants. J. Virol. 65 (1991) 5092-5095
38. Nickeleit V., and Mihatsch M.J. Polyomavirus nephropathy in native kidneys and renal allografts: an update on an escalating threat. Transpl. Int. 19 (2006) 960-973
39. Pavlakis M., Haririan A., and Klassen D.K. BK virus infection after non-renal transplantation. Adv. Exp. Med. Biol. 577 (2006) 185-189
40. Postigo A.A. Opposing functions of ZEB proteins in the regulation of the TGFbeta/BMP signaling pathway. EMBO J. 22 (2003) 2443-2452
41. Postigo A.A., Depp J.L., Taylor J.J., and Kroll K.L. Regulation of Smad signaling through a differential recruitment of coactivators and corepressors by ZEB proteins. EMBO J. 22 (2003) 2453-2462
42. Ravichandran V., Jensen P.N., and Major E.O. MEK1/2 inhibitors block basal and transforming growth factor-beta1-stimulated JC virus multiplication. J. Virol. 81 (2007) 6412-6418
43. Ravichandran V., and Major E.O. Viral proteomics: a promising approach for understanding JC virus tropism. Proteomics 6 (2006) 5628-5636
44. Reed S.G. TGF-beta in infections and infectious diseases. Microbes Infect. 1 (1999) 1313-1325
45. Rubinstein R., Schoonakker B.C., and Harley E.H. Recurring theme of changes in the transcriptional control region of BK virus during adaptation to cell culture. J. Virol. 65 (1991) 1600-1604
46. Sharma P.M., Gupta G., Vats A., Shapiro R., and Randhawa P.S. Polyomavirus BK non-coding control region rearrangements in health and disease. J. Med. Virol. 79 (2007) 1199-1207
47. Shi Y., and Massague J. Mechanisms of TGF-beta signaling from cell membrane to the nucleus. Cell 113 (2003) 685-700
48. Shi Y., Wang Y.F., Jayaraman L., Yang H., Massague J., and Pavletich N.P. Crystal structure of a Smad MH1 domain bound to DNA: insights on DNA binding in TGF-beta signaling. Cell 94 (1998) 585-594
49. Shihab F.S., Andoh T.F., Tanner A.M., Noble N.A., Border W.A., Franceschini N., and Bennett W.M. Role of transforming growth factor-beta 1 in experimental chronic cyclosporine nephropathy. Kidney Int. 49 (1996) 1141-1151
50. Stoner G.L., Alappan R., Jobes D.V., Ryschkewitsch C.F., and Landry M.L. BK virus regulatory region rearrangements in brain and cerebrospinal fluid from a leukemia patient with tubulointerstitial nephritis and meningoencephalitis. Am. J. Kidney Dis. 39 (2002) 1102-1112
51. Sundsfjord A., Johansen T., Flaegstad T., Moens U., Villand P., Subramani S., and Traavik T. At least two types of control regions can be found among naturally occurring BK virus strains. J. Virol. 64 (1990) 3864-3871
52. Sundsfjord A., Flaegstad T., Flo R., Spein A.R., Pedersen M., Permin H., Julsrud J., and Traavik T. BK and JC viruses in human immunodeficiency virus type 1-infected persons: prevalence, excretion, viremia, and viral regulatory regions. J. Infect Dis. 169 (1994) 485-490
53. Sundsfjord A., Osei A., Rosenqvist H., Van Ghelue M., Silsand Y., Haga H.J., Rekvig O.P., and Moens U. BK and JC viruses in patients with systemic lupus erythematosus: prevalent and persistent BK viruria, sequence stability of the viral regulatory regions, and nondetectable viremia. J. Infect Dis. 180 (1999) 1-9
54. Takasaka T., Goya N., Tokumoto T., Tanabe K., Toma H., Ogawa Y., Hokama S., Momose A., Funyu T., Fujioka T., Omori S., Akiyama H., Chen Q., Zheng H.Y., Ohta N., Kitamura T., and Yogo Y. Subtypes of BK virus prevalent in Japan and variation in their transcriptional control region. J. Gen. Virol. 85 (2004) 2821-2827
55. Trofe J., Hirsch H.H., and Ramos E. Polyomavirus-associated nephropathy: update of clinical management in kidney transplant patients. Transpl. Infect Dis. 8 (2006) 76-85
56. Watanabe S., and Yoshiike K. Decreasing the number of 68-base-pair tandem repeats in the BK virus transcriptional control region reduces plaque size and enhances transforming capacity. J. Virol. 55 (1985) 823-825
57. Watanabe S., and Yoshiike K. Evolutionary changes of transcriptional control region in a minute-plaque viable deletion mutant of BK virus. J. Virol. 59 (1986) 260-266