-
1
-
-
0034609791
-
The large-scale organization of metabolic networks
-
Jeong, H., Tombor, B., Albert, R., Oltvai, Z. N. & Barabási, A.-L. The large-scale organization of metabolic networks. Nature 407, 651-654 (2000).
-
(2000)
Nature
, vol.407
, pp. 651-654
-
-
Jeong, H.1
Tombor, B.2
Albert, R.3
Oltvai, Z.N.4
Barabási, A.-L.5
-
2
-
-
0035823264
-
The small world inside large metabolic networks
-
Wagner, A. & Fell, D. A. The small world inside large metabolic networks. Proc. R. Soc. Lond. B 268, 1803-1810 (2001).
-
(2001)
Proc. R. Soc. Lond. B
, vol.268
, pp. 1803-1810
-
-
Wagner, A.1
Fell, D.A.2
-
3
-
-
0037199968
-
Hierarchical organization of modularity in metabolic networks
-
Ravasz, E., Somera, A. L., Mongru, D. A., Oltvai, Z. N. & Barabási, A.-L. Hierarchical organization of modularity in metabolic networks. Science 297, 1551-1555 (2002).
-
(2002)
Science
, vol.297
, pp. 1551-1555
-
-
Ravasz, E.1
Somera, A.L.2
Mongru, D.A.3
Oltvai, Z.N.4
Barabási, A.-L.5
-
4
-
-
0037345719
-
Subnetwork hierarchies of biochemical pathways
-
Holme, P., Huss, M. & Jeong, H. Subnetwork hierarchies of biochemical pathways. Bioinformatics 19, 532-538 (2003).
-
(2003)
Bioinformatics
, vol.19
, pp. 532-538
-
-
Holme, P.1
Huss, M.2
Jeong, H.3
-
8
-
-
0034625143
-
The Escherichia coli MG 1655 in silico metabolic genotype: Its definition, characteristics, and capabilities
-
Edwards, J. S. & Palsson, B. O. The Escherichia coli MG 1655 in silico metabolic genotype: its definition, characteristics, and capabilities. Proc. Natl Acad. Sci. USA 97, 5528-5533 (2000).
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 5528-5533
-
-
Edwards, J.S.1
Palsson, B.O.2
-
9
-
-
0035125986
-
In silico predictions of Escherichia coli metabolic capabilities are consistent with experimental data
-
Edwards, J. S., Ibarra, B. U. & Palsson, B. O. In silico predictions of Escherichia coli metabolic capabilities are consistent with experimental data. Nature Biotechnol. 19, 125-130 (2001).
-
(2001)
Nature Biotechnol.
, vol.19
, pp. 125-130
-
-
Edwards, J.S.1
Ibarra, B.U.2
Palsson, B.O.3
-
10
-
-
0037079023
-
Escherichia coli K-12 undergoes adaptive evolution to achieve in silico predicted optimal growth
-
Ibarra, R. U., Edwards, J. S. & Palsson, B. O. Escherichia coli K-12 undergoes adaptive evolution to achieve in silico predicted optimal growth. Nature 420, 186-189 (2002).
-
(2002)
Nature
, vol.420
, pp. 186-189
-
-
Ibarra, R.U.1
Edwards, J.S.2
Palsson, B.O.3
-
11
-
-
0037021804
-
Characterizing the metabolic phenotype: A phenotype phase plane analysis
-
Edwards, J. S., Ramakrishna, R. & Palsson, B. O. Characterizing the metabolic phenotype: a phenotype phase plane analysis. Biotechnol. Bioeng. 77, 27-36 (2002).
-
(2002)
Biotechnol. Bioeng.
, vol.77
, pp. 27-36
-
-
Edwards, J.S.1
Ramakrishna, R.2
Palsson, B.O.3
-
12
-
-
0037069467
-
Analysis of optimality in natural and perturbed metabolic networks
-
Segre, D., Vitkup, D. & Church, G. M. Analysis of optimality in natural and perturbed metabolic networks. Proc. Natl Acad. Sci. USA 99, 15112-15117 (2002).
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 15112-15117
-
-
Segre, D.1
Vitkup, D.2
Church, G.M.3
-
13
-
-
15444350252
-
The complete genome sequence of Escherichia coli K-12
-
Blattner, F. R. et al. The complete genome sequence of Escherichia coli K-12. Science 277, 1453-1474 (1997).
-
(1997)
Science
, vol.277
, pp. 1453-1474
-
-
Blattner, F.R.1
-
14
-
-
0141504252
-
Experimental determination and system level analysis of essential genes in Escherichia coli MG1655
-
Gerdes, S. Y. et al. Experimental determination and system level analysis of essential genes in Escherichia coli MG1655. J. Bacteriol. 185, 5673-5684 (2003).
-
(2003)
J. Bacteriol.
, vol.185
, pp. 5673-5684
-
-
Gerdes, S.Y.1
-
15
-
-
0036134642
-
Metabolic flux responses to pyruvate kinase knockout in Escherichia coli
-
Emmerling, M. et al. Metabolic flux responses to pyruvate kinase knockout in Escherichia coli. J. Bacteriol. 184, 152-164 (2002).
-
(2002)
J. Bacteriol.
, vol.184
, pp. 152-164
-
-
Emmerling, M.1
-
16
-
-
0021517318
-
Efficient Monte-Carlo procedures for generating points uniformly distributed over bounded regions
-
Smith, R. L. Efficient Monte-Carlo procedures for generating points uniformly distributed over bounded regions. Oper. Res. 32, 1296-1308 (1984).
-
(1984)
Oper. Res.
, vol.32
, pp. 1296-1308
-
-
Smith, R.L.1
-
17
-
-
0005342311
-
Hit-and-run mixes fast
-
Lovász, L. Hit-and-run mixes fast. Math. Program. 86, 443-461 (1999).
-
(1999)
Math. Program.
, vol.86
, pp. 443-461
-
-
Lovász, L.1
-
18
-
-
0035981014
-
Universal behavior of load distribution in scale-free networks
-
Goh, K. I., Kahng, B. & Kim, D. Universal behavior of load distribution in scale-free networks. Phys. Rev. Lett. 87, 278701 (2001).
-
(2001)
Phys. Rev. Lett.
, vol.87
, pp. 278701
-
-
Goh, K.I.1
Kahng, B.2
Kim, D.3
-
19
-
-
0038483826
-
Emergence of scaling in random networks
-
Barabási, A.-L. & Albert, R. Emergence of scaling in random networks. Science 286, 509-512 (1999).
-
(1999)
Science
, vol.286
, pp. 509-512
-
-
Barabási, A.-L.1
Albert, R.2
-
20
-
-
0037365560
-
Spatial structure of the Internet traffic
-
Barthelemy, M., Gondran, B. & Guichard, E. Spatial structure of the Internet traffic. Physica A 319, 633-642 (2003).
-
(2003)
Physica A
, vol.319
, pp. 633-642
-
-
Barthelemy, M.1
Gondran, B.2
Guichard, E.3
-
21
-
-
0042093610
-
The connectivity structure, giant strong component and centrality of metabolic networks
-
Ma, H. W. & Zeng, A. P. The connectivity structure, giant strong component and centrality of metabolic networks. Bioinformatics 19, 1423-1430 (2003).
-
(2003)
Bioinformatics
, vol.19
, pp. 1423-1430
-
-
Ma, H.W.1
Zeng, A.P.2
-
22
-
-
0033215210
-
Pathway alignment: Application to the comparative analysis of glycolytic enzymes
-
Dandekar, T., Schuster, S., Snel, B., Huynen, M. & Bork, P. Pathway alignment: application to the comparative analysis of glycolytic enzymes. Biochem. J. 343, 115-124 (1999).
-
(1999)
Biochem. J.
, vol.343
, pp. 115-124
-
-
Dandekar, T.1
Schuster, S.2
Snel, B.3
Huynen, M.4
Bork, P.5
-
23
-
-
0034064689
-
A general definition of metabolic pathways useful for systematic organization and analysis of complex metabolic networks
-
Schuster, S., Fell, D. A. & Dandekar, T. A general definition of metabolic pathways useful for systematic organization and analysis of complex metabolic networks. Nature Biotechnol. 18, 326-332 (2000).
-
(2000)
Nature Biotechnol.
, vol.18
, pp. 326-332
-
-
Schuster, S.1
Fell, D.A.2
Dandekar, T.3
-
24
-
-
0037079050
-
Metabolic network structure determines key aspects of functionality and regulation
-
Stelling, J., Klamt, S., Bettenbrock, K., Schuster, S. & Gilles, E. D. Metabolic network structure determines key aspects of functionality and regulation. Nature 420, 190-193 (2002).
-
(2002)
Nature
, vol.420
, pp. 190-193
-
-
Stelling, J.1
Klamt, S.2
Bettenbrock, K.3
Schuster, S.4
Gilles, E.D.5
-
25
-
-
0032753923
-
Metabolic flux ratio analysis of genetic and environmental modulations of Escherichia coli central carbon metabolism
-
Sauer, U. et al. Metabolic flux ratio analysis of genetic and environmental modulations of Escherichia coli central carbon metabolism. J. Bacteriol. 181, 6679-6688 (1999).
-
(1999)
J. Bacteriol.
, vol.181
, pp. 6679-6688
-
-
Sauer, U.1
-
26
-
-
0035856579
-
Metabolic flux response to phosphoglucose isomerase knock-out in Escherichia coli and impact of overexpression of the soluble transhydrogenase UdhA
-
Canonaco, F. et al. Metabolic flux response to phosphoglucose isomerase knock-out in Escherichia coli and impact of overexpression of the soluble transhydrogenase UdhA. FEMS Microbiol. Lett. 204, 247-252 (2001).
-
(2001)
FEMS Microbiol. Lett.
, vol.204
, pp. 247-252
-
-
Canonaco, F.1
-
27
-
-
0037335931
-
Metabolic flux profiling of Escherichia coli mutants in central carbon metabolism using GC-MS
-
Fischer, E. & Sauer, U. Metabolic flux profiling of Escherichia coli mutants in central carbon metabolism using GC-MS. Eur. J. Biochem. 270, 880-891 (2003).
-
(2003)
Eur. J. Biochem.
, vol.270
, pp. 880-891
-
-
Fischer, E.1
Sauer, U.2
-
28
-
-
0033518234
-
From molecular to modular cell biology
-
Hartwell, L. H., Hopfield, J. J., Leibler, S. & Murray, A. W. From molecular to modular cell biology. Nature 402, C47-C52 (1999).
-
(1999)
Nature
, vol.402
-
-
Hartwell, L.H.1
Hopfield, J.J.2
Leibler, S.3
Murray, A.W.4
-
29
-
-
0037676107
-
Motifs, modules and games in bacteria
-
Wolf, D. M. & Arkin, A. P. Motifs, modules and games in bacteria. Curr. Opin. Microbiol. 6, 125-134 (2003).
-
(2003)
Curr. Opin. Microbiol.
, vol.6
, pp. 125-134
-
-
Wolf, D.M.1
Arkin, A.P.2
|