메뉴 건너뛰기




Volumn 16, Issue 3, 2008, Pages 367-382

High-precision structural analysis of subnuclear complexes in fixed and live cells via spatially modulated illumination (SMI) microscopy

Author keywords

FPALM; Live cell imaging; Localization microscopy; Nanosizing; PALM; PALMIRA; SALM; SMI microscopy; SPDM; STORM; Vertico SMI microscope

Indexed keywords

ARTICLE; CELL NUCLEUS; CELL STRUCTURE; CYTOMETRY; FLUORESCENCE MICROSCOPY; INTERFEROMETRY; NANOANALYSIS; NUCLEAR PORE; NUCLEAR PORE COMPLEX; PRIORITY JOURNAL; SPATIALLY MODULATED ILLUMINATION; STRUCTURE ANALYSIS; TEMPERATURE; THREE DIMENSIONAL IMAGING; WATER IMMERSION;

EID: 43149096709     PISSN: 09673849     EISSN: 15736849     Source Type: Journal    
DOI: 10.1007/s10577-008-1238-2     Document Type: Article
Times cited : (57)

References (43)
  • 1
    • 0035384691 scopus 로고    scopus 로고
    • Spatially modulated illumination microscopy: Online visualization of intensity distribution and prediction of nanometer precision of axial distance measurements by computer simulations
    • Albrecht B, Failla AV, Heintzmann R, Cremer C (2001) Spatially modulated illumination microscopy: Online visualization of intensity distribution and prediction of nanometer precision of axial distance measurements by computer simulations. J Biomed Opt 6: 292-299.
    • (2001) J Biomed Opt , vol.6 , pp. 292-299
    • Albrecht, B.1    Failla, A.V.2    Heintzmann, R.3    Cremer, C.4
  • 2
    • 0036017335 scopus 로고    scopus 로고
    • Spatially modulated illumination microscopy allows axial distance resolution in the nanometer range
    • Albrecht B, Failla AV, Schweitzer A, Cremer C (2002) Spatially modulated illumination microscopy allows axial distance resolution in the nanometer range. Appl Opt 41: 80-87.
    • (2002) Appl Opt , vol.41 , pp. 80-87
    • Albrecht, B.1    Failla, A.V.2    Schweitzer, A.3    Cremer, C.4
  • 3
    • 38449114077 scopus 로고    scopus 로고
    • Nanostructure analysis using spatially modulated illumination microscopy
    • Baddeley D, Batram C, Weiland Y, Cremer C, Birk UJ (2007) Nanostructure analysis using spatially modulated illumination microscopy. Nat Protoc 2: 2640-2646.
    • (2007) Nat Protoc , vol.2 , pp. 2640-2646
    • Baddeley, D.1    Batram, C.2    Weiland, Y.3    Cremer, C.4    Birk, U.J.5
  • 4
    • 0027908738 scopus 로고
    • Enhancement of axial resolution in fluorescence microscopy by standing-wave excitation
    • Bailey B, Farkas DL, Taylor DL, Lanni F (1993) Enhancement of axial resolution in fluorescence microscopy by standing-wave excitation. Nature 366: 44-48.
    • (1993) Nature , vol.366 , pp. 44-48
    • Bailey, B.1    Farkas, D.L.2    Taylor, D.L.3    Lanni, F.4
  • 5
    • 33747179417 scopus 로고    scopus 로고
    • Imaging intracellular fluorescent proteins at nanometer resolution
    • 5793
    • Betzig E, Patterson GH, Sougrat R et al. (2006) Imaging intracellular fluorescent proteins at nanometer resolution. Science 313(5793): 1642.
    • (2006) Science , vol.313 , pp. 1642
    • Betzig, E.1    Patterson, G.H.2    Sougrat, R.3
  • 6
    • 0031886237 scopus 로고    scopus 로고
    • High-precision distance measurements and volume-conserving segmentation of objects near and below the resolution limit in three-dimensional confocal fluorescence microscopy
    • 2
    • Bornfleth H, Sätzler K, Eils R, Cremer C (1998) High-precision distance measurements and volume-conserving segmentation of objects near and below the resolution limit in three-dimensional confocal fluorescence microscopy. J Microsc 189(2): 118-136.
    • (1998) J Microsc , vol.189 , pp. 118-136
    • Bornfleth, H.1    Sätzler, K.2    Eils, R.3    Cremer, C.4
  • 7
    • 0008322513 scopus 로고    scopus 로고
    • Verfahren zur multispektralen Präzisionsdistanzmessung in biologischen Mikroobjekten
    • German Patent application No. 196.54. 824.1/DE, submitted Dec 23, 1996. European Patent EP 1997953660, 08.04.1999; Japanese Patent JP 1998528237, 23.06.1999; United States Patent US 09331644, 25.08.1999.
    • Cremer C, Hausmann M, Bradl J, Rinke B (1996) Verfahren zur multispektralen Präzisionsdistanzmessung in biologischen Mikroobjekten(Procedure for multispectral precision distance measurements in biological microobjects). German Patent application No. 196.54. 824.1/DE, submitted Dec 23, 1996. European Patent EP 1997953660, 08.04.1999; Japanese Patent JP 1998528237, 23.06.1999; United States Patent US 09331644, 25.08.1999.
    • (1996)
    • Cremer, C.1    Hausmann, M.2    Bradl, J.3    Rinke, B.4
  • 8
    • 0001075057 scopus 로고    scopus 로고
    • Principles of spectral precision distance confocal microscopy for the analysis of molecular nuclear structure
    • Academic Press San Diego. 3(41)
    • Cremer C, Edelmann P, Bornfleth H et al. (1999) Principles of spectral precision distance confocal microscopy for the analysis of molecular nuclear structure. In: Jähne B, Haußecker H, Geißler P, eds. Handbook of Computer Vision and Applications. San Diego: Academic Press 3(41): 839-885.
    • (1999) Handbook of Computer Vision and Applications , pp. 839-885
    • Cremer, C.1    Edelmann, P.2    Bornfleth, H.3    Jähne, B.4    Haußecker, H.5    Geißler, P.6
  • 9
    • 43149119925 scopus 로고    scopus 로고
    • Far field light microscopical method, system and computer program product for analyzing at least one object having a subwavelength size
    • US Patent 7,298,461 B2, filed Oct 9, 2001.
    • Cremer C, Failla AV, Albrecht B (2007) Far field light microscopical method, system and computer program product for analyzing at least one object having a subwavelength size. US Patent 7,298,461 B2, filed Oct 9, 2001.
    • (2007)
    • Cremer, C.1    Failla, A.V.2    Albrecht, B.3
  • 10
    • 0033231484 scopus 로고    scopus 로고
    • The 3D positioning of ANT2 and ANT3 genes within female X chromosome territories correlates with gene activity
    • 2
    • Dietzel S, Schiebel K, Little G et al. (1999) The 3D positioning of ANT2 and ANT3 genes within female X chromosome territories correlates with gene activity. Exp Cell Res 252(2): 363-375.
    • (1999) Exp Cell Res , vol.252 , pp. 363-375
    • Dietzel, S.1    Schiebel, K.2    Little, G.3
  • 11
    • 33746806381 scopus 로고    scopus 로고
    • Macromolecular-scale resolution in biological fluorescence microscopy
    • 31
    • Donnert G, Keller J, Medda R et al. (2006) Macromolecular-scale resolution in biological fluorescence microscopy. Proc Natl Acad Sci U S A 103(31): 11440.
    • (2006) Proc Natl Acad Sci U S a , vol.103 , pp. 11440
    • Donnert, G.1    Keller, J.2    Medda, R.3
  • 12
    • 34547999288 scopus 로고    scopus 로고
    • Focal spots of size λ/23 open up far-field fluorescence microscopy at 33 nm axial resolution
    • 16
    • Dyba M, Hell S (2002) Focal spots of size λ/23 open up far-field fluorescence microscopy at 33 nm axial resolution. Phys Rev Lett 88(16): 163901.
    • (2002) Phys Rev Lett , vol.88 , pp. 163901
    • Dyba, M.1    Hell, S.2
  • 13
    • 0037133634 scopus 로고    scopus 로고
    • Fast 100 nm resolution three-dimensional microscope reveals structural plasticity of mitochondria in live yeast
    • 6
    • Egner A, Jakobs S, Hell S (2002) Fast 100 nm resolution three-dimensional microscope reveals structural plasticity of mitochondria in live yeast. Proc Natl Acad Sci U S A 99(6): 3370-3375.
    • (2002) Proc Natl Acad Sci U S a , vol.99 , pp. 3370-3375
    • Egner, A.1    Jakobs, S.2    Hell, S.3
  • 14
    • 0033860537 scopus 로고    scopus 로고
    • Three-dimensional spectral precision distance microscopy of chromatin nanostructures after triple-colour DNA labelling: A study of the BCR region on chromosome 22 and the Philadelphia chromosome
    • 2
    • Esa A, Edelmann P, Kreth G et al. (2000) Three-dimensional spectral precision distance microscopy of chromatin nanostructures after triple-colour DNA labelling: a study of the BCR region on chromosome 22 and the Philadelphia chromosome. J Microsc 199(2): 96-105.
    • (2000) J Microsc , vol.199 , pp. 96-105
    • Esa, A.1    Edelmann, P.2    Kreth, G.3
  • 15
    • 0034968320 scopus 로고    scopus 로고
    • Conformational differences in the 3-D nanostructure of the immunoglobulin heavy-chain locus, a hotspot of chromosomal translocations in B lymphocytes
    • 2
    • Esa A, Coleman AE, Edelmann P, Silva S, Cremer C, Janz S (2001) Conformational differences in the 3-D nanostructure of the immunoglobulin heavy-chain locus, a hotspot of chromosomal translocations in B lymphocytes. Cancer Genet Cytogenet 127(2): 168-173.
    • (2001) Cancer Genet Cytogenet , vol.127 , pp. 168-173
    • Esa, A.1    Coleman, A.E.2    Edelmann, P.3    Silva, S.4    Cremer, C.5    Janz, S.6
  • 16
    • 0036848659 scopus 로고    scopus 로고
    • Subwavelength size determination by spatially modulated illumination virtual microscopy
    • Failla A, Cavallo A, Cremer C (2002a) Subwavelength size determination by spatially modulated illumination virtual microscopy. Appl Opt 41: 6651-6659.
    • (2002) Appl Opt , vol.41 , pp. 6651-6659
    • Failla, A.1    Cavallo, A.2    Cremer, C.3
  • 17
    • 0036903851 scopus 로고    scopus 로고
    • Nanosizing of fluorescent objects by spatially modulated illumination microscopy
    • 34
    • Failla AV, Spöri U, Albrecht B, Kroll A, Cremer C (2002b) Nanosizing of fluorescent objects by spatially modulated illumination microscopy. Appl Opt 41(34): 7275-7283.
    • (2002) Appl Opt , vol.41 , pp. 7275-7283
    • Failla, A.1    Spöri, U.2    Albrecht, B.3    Kroll, A.4    Cremer, C.5
  • 18
    • 3042601961 scopus 로고    scopus 로고
    • Nanostructure analysis using spatially modulated illumination microscopy
    • Failla AV, Albrecht B, Spöri U et al. (2003) Nanostructure analysis using spatially modulated illumination microscopy. ComPlexUs 1: 77-88.
    • (2003) ComPlexUs , vol.1 , pp. 77-88
    • Failla, A.1    Albrecht, B.2    Spöri, U.3
  • 19
    • 0034691185 scopus 로고    scopus 로고
    • True optical resolution beyond the Rayleigh limit achieved by standing wave illumination
    • 13
    • Frohn J, Knapp H, Stemmer A (2000) True optical resolution beyond the Rayleigh limit achieved by standing wave illumination. Proc Natl Acad Sci U S A 97(13): 7232-7236.
    • (2000) Proc Natl Acad Sci U S a , vol.97 , pp. 7232-7236
    • Frohn, J.1    Knapp, H.2    Stemmer, A.3
  • 20
    • 0001427310 scopus 로고    scopus 로고
    • Three-dimensional resolution enhancement in fluorescence microscopy by harmonic excitation
    • 11
    • Frohn J, Knapp H, Stemmer A (2001) Three-dimensional resolution enhancement in fluorescence microscopy by harmonic excitation. Opt Lett 26(11): 828-830.
    • (2001) Opt Lett , vol.26 , pp. 828-830
    • Frohn, J.1    Knapp, H.2    Stemmer, A.3
  • 21
    • 34250666744 scopus 로고    scopus 로고
    • Resolution of λ/10 in fluorescence microscopy using fast single molecule photo-switching
    • 2
    • Geisler C et al. (2007) Resolution of λ/10 in fluorescence microscopy using fast single molecule photo-switching. Appl Phys A: Mater Sci Process 88(2): 223-226.
    • (2007) Appl Phys A: Mater Sci Process , vol.88 , pp. 223-226
    • Geisler, C.1
  • 22
    • 24944539530 scopus 로고    scopus 로고
    • Nonlinear structured-illumination microscopy: Wide-field fluorescence imaging with theoretically unlimited resolution
    • 37
    • Gustafsson M (2005) Nonlinear structured-illumination microscopy: wide-field fluorescence imaging with theoretically unlimited resolution. Proc Natl Acad Sci U S A 102(37): 13081-13086.
    • (2005) Proc Natl Acad Sci U S a , vol.102 , pp. 13081-13086
    • Gustafsson, M.1
  • 23
    • 0029213489 scopus 로고
    • Sevenfold improvement of axial resolution in 3D widefield microscopy using two objective lenses
    • Gustafsson M, Agard D, Sedat J (1995) Sevenfold improvement of axial resolution in 3D widefield microscopy using two objective lenses. Proc SPIE 2412: 147-156.
    • (1995) Proc SPIE , vol.2412 , pp. 147-156
    • Gustafsson, M.1    Agard, D.2    Sedat, J.3
  • 24
    • 0029710810 scopus 로고    scopus 로고
    • 3D widefield microscopy with two objective lenses: Experimental verification of improved axial resolution
    • Gustafsson M, Agard D, Sedat J (1996) 3D widefield microscopy with two objective lenses: experimental verification of improved axial resolution. Proc SPIE 2655: 62-65.
    • (1996) Proc SPIE , vol.2655 , pp. 62-65
    • Gustafsson, M.1    Agard, D.2    Sedat, J.3
  • 25
    • 0037099320 scopus 로고    scopus 로고
    • High-resolution colocalization of single dye molecules by fluorescence lifetime imaging microscopy
    • 14
    • Heilemann M, Herten DP, Heintzmann R et al. (2002) High-resolution colocalization of single dye molecules by fluorescence lifetime imaging microscopy. Anal Chem 74(14): 3511-3517.
    • (2002) Anal Chem , vol.74 , pp. 3511-3517
    • Heilemann, M.1    Herten, D.P.2    Heintzmann, R.3
  • 27
    • 0036674522 scopus 로고    scopus 로고
    • Saturated patterned excitation microscopy - Aconcept for optical resolution improvement
    • 8
    • Heintzmann R, Jovin T, Cremer C (2002) Saturated patterned excitation microscopy - aconcept for optical resolution improvement. J Opt Soc Am A 19(8): 1599-1609.
    • (2002) J Opt Soc Am a , vol.19 , pp. 1599-1609
    • Heintzmann, R.1    Jovin, T.2    Cremer, C.3
  • 28
    • 0028385084 scopus 로고
    • Measurement of 4pi-confocal point spread function proves 75 nm axial resolution
    • 11
    • Hell S, Lindek S, Cremer C, Stelzer E (1994) Measurement of 4pi-confocal point spread function proves 75 nm axial resolution. Appl Phys Lett 64(11): 1335-1337.
    • (1994) Appl Phys Lett , vol.64 , pp. 1335-1337
    • Hell, S.1    Lindek, S.2    Cremer, C.3    Stelzer, E.4
  • 29
    • 0030821820 scopus 로고    scopus 로고
    • Fixation-dependent organization of core histones following DNA fluorescent in situ hybridization
    • 2
    • Hendzel M, Bazett-Jones D (1997) Fixation-dependent organization of core histones following DNA fluorescent in situ hybridization. Chromosoma 106(2): 114-123.
    • (1997) Chromosoma , vol.106 , pp. 114-123
    • Hendzel, M.1    Bazett-Jones, D.2
  • 30
    • 33845360042 scopus 로고    scopus 로고
    • Ultra-high resolution imaging by fluorescence photoactivation localization microscopy
    • 11
    • Hess ST, Girirajan T, Mason M (2006) Ultra-high resolution imaging by fluorescence photoactivation localization microscopy. Biophys J 91(11): 4258.
    • (2006) Biophys J , vol.91 , pp. 4258
    • Hess, S.T.1    Girirajan, T.2    Mason, M.3
  • 31
    • 36849053761 scopus 로고    scopus 로고
    • Dynamic clustered distribution of hemagglutinin resolved at 40 nm in living cell membranes discriminates between raft theories
    • 44
    • Hess ST, Gould TJ, Gudheti MV, Maas SA, Mills KD, ZimmerbergJ (2007) Dynamic clustered distribution of hemagglutinin resolved at 40nm in living cell membranes discriminates between raft theories. Proc Natl Acad Sci U S A 104(44): 17370-17375.
    • (2007) Proc Natl Acad Sci U S a , vol.104 , pp. 17370-17375
    • Hess, S.T.1    Gould, T.J.2    Gudheti, M.V.3    Maas, S.A.4    Mills, K.D.5    Zimmerberg, J.6
  • 32
    • 22244440761 scopus 로고    scopus 로고
    • Nano-sizing of specific gene domains in intact human cell nuclei by spatially modulated illumination light microscopy
    • 6
    • Hildenbrand G, Rapp A, Spöri U, Wagner C, Cremer C, Hausmann M (2005) Nano-sizing of specific gene domains in intact human cell nuclei by spatially modulated illumination light microscopy. Biophys J 88(6): 4312-4318.
    • (2005) Biophys J , vol.88 , pp. 4312-4318
    • Hildenbrand, G.1    Rapp, A.2    Spöri, U.3    Wagner, C.4    Cremer, C.5    Hausmann, M.6
  • 33
    • 38949216802 scopus 로고    scopus 로고
    • Three-dimension super-resolution imaging by stochastic optical reconstruction microscopy
    • 5864
    • Huang B, Wang W, Bates M, Zhuang X (2008) Three-dimension super-resolution imaging by stochastic optical reconstruction microscopy. Science 319(5864): 810-813.
    • (2008) Science , vol.319 , pp. 810-813
    • Huang, B.1    Wang, W.2    Betes, M.3    Zhuang, X.4
  • 34
    • 0034682512 scopus 로고    scopus 로고
    • Fluorescence microscopy with diffraction resolution barrier broken by stimulated emission
    • Klar T, Jakobs S, Dyba M, Egner A, Hell S (2000) Fluorescence microscopy with diffraction resolution barrier broken by stimulated emission. Proc Natl Acad Sci U S A 97: 8206-8210.
    • (2000) Proc Natl Acad Sci U S a , vol.97 , pp. 8206-8210
    • Klar, T.1    Jakobs, S.2    Dyba, M.3    Egner, A.4    Hell, S.5
  • 36
    • 4243662842 scopus 로고
    • Standing wave luminescence microscopy
    • US Patent 4,621,911.
    • Lanni F, Taylor DL, Waggoner AS (1986) Standing wave luminescence microscopy. US Patent 4,621,911.
    • (1986)
    • Lanni, F.1    Taylor, D.L.2    Waggoner, A.S.3
  • 37
    • 24944484744 scopus 로고    scopus 로고
    • Superresolution by localization of quantum dots using blinking statistics
    • 18
    • Lidke AK, Rieger B, Jovin TM, Heintzmann R (2005) Superresolution by localization of quantum dots using blinking statistics. Optics Express 13(18): 7052-7062.
    • (2005) Optics Express , vol.13 , pp. 7052-7062
    • Lidke, A.K.1    Rieger, B.2    Jovin, T.M.3    Heintzmann, R.4
  • 38
    • 2342639627 scopus 로고    scopus 로고
    • Measuring the size of biological nanostructures with spatially modulated illumination microscopy
    • 5
    • Martin S, Failla AV, Spöri U, Cremer C, Pombo A (2004) Measuring the size of biological nanostructures with spatially modulated illumination microscopy. Mol Biol Cell 15(5): 2449.
    • (2004) Mol Biol Cell , vol.15 , pp. 2449
    • Martin, S.1    Failla, A.V.2    Spöri, U.3    Cremer, C.4    Pombo, A.5
  • 40
    • 38149087422 scopus 로고    scopus 로고
    • Lightoptical precision measurements of the active and inactive Prader-Willi syndrome imprinted regions in human cell nuclei
    • 1
    • Rauch J, Knoch TA, Solovei I et al. (2008) Lightoptical precision measurements of the active and inactive Prader-Willi syndrome imprinted regions in human cell nuclei. Differentiation 76(1): 66-83.
    • (2008) Differentiation , vol.76 , pp. 66-83
    • Rauch, J.1    Knoch, T.A.2    Solovei, I.3
  • 41
    • 33749026335 scopus 로고    scopus 로고
    • Sub-diffraction-limit imaging by stochastic optical reconstruction microscopy (STORM)
    • Rust M, Bates M, Zhuang X (2006) Sub-diffraction-limit imaging by stochastic optical reconstruction microscopy (STORM). Nat Methods 3: 793-796.
    • (2006) Nat Methods , vol.3 , pp. 793-796
    • Rust, M.1    Bates, M.2    Zhuang, X.3
  • 42
    • 19244385247 scopus 로고    scopus 로고
    • Superresolution size determination in fluorescence microscopy: A comparison between spatially modulated illumination and confocal laser scanning microscopy
    • Spöri U, Failla A, Cremer C (2004) Superresolution size determination in fluorescence microscopy: a comparison between spatially modulated illumination and confocal laser scanning microscopy. J Appl Phys 95: 8436-8443.
    • (2004) J Appl Phys , vol.95 , pp. 8436-8443
    • Spöri, U.1    Failla, A.2    Cremer, C.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.