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Volumn 5, Issue 6, 2007, Pages 759-768

LRET-based HTS of a small-compound library for inhibitors of bacterial RNA polymerase

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL ENZYME; ENZYME INHIBITOR; RNA POLYMERASE;

EID: 38049071617     PISSN: 1540658X     EISSN: None     Source Type: Journal    
DOI: 10.1089/adt.2007.095     Document Type: Article
Times cited : (11)

References (34)
  • 1
    • 0344837844 scopus 로고    scopus 로고
    • Luminescence resonance energy transfer-based high-throughput screening assay for inhibitors of essential protein-protein interactions in bacterial RNA polymerase
    • Bergendahl V, Heyduk T, Burgess RR: Luminescence resonance energy transfer-based high-throughput screening assay for inhibitors of essential protein-protein interactions in bacterial RNA polymerase. Appl Environ Microbiol 2003;69:1492-1498.
    • (2003) Appl Environ Microbiol , vol.69 , pp. 1492-1498
    • Bergendahl, V.1    Heyduk, T.2    Burgess, R.R.3
  • 2
    • 0032553125 scopus 로고    scopus 로고
    • Localization of a sigma70 binding site on the N terminus of the Escherichia coli RNA polymerase beta′ subunit
    • Arthur TM, Burgess RR: Localization of a sigma70 binding site on the N terminus of the Escherichia coli RNA polymerase beta′ subunit. J Biol Chem 1998;273:31381-31387.
    • (1998) J Biol Chem , vol.273 , pp. 31381-31387
    • Arthur, T.M.1    Burgess, R.R.2
  • 3
    • 0034725649 scopus 로고    scopus 로고
    • Mutational analysis of beta'260-309, a sigma 70 binding site located on Escherichia coli core RNA polymerase
    • Arthur TM, Anthony LC, Burgess RR: Mutational analysis of beta'260-309, a sigma 70 binding site located on Escherichia coli core RNA polymerase. J Biol Chem 2000;275:23113-23119.
    • (2000) J Biol Chem , vol.275 , pp. 23113-23119
    • Arthur, T.M.1    Anthony, L.C.2    Burgess, R.R.3
  • 4
    • 0032545186 scopus 로고    scopus 로고
    • Identification of a contact site for different transcription activators in region 4 of the Escherichia coli RNA polymerase sigma70 subunit
    • Lonetto MA, Rhodius V, Lamberg K, Kiley P, Busby S, Gross C: Identification of a contact site for different transcription activators in region 4 of the Escherichia coli RNA polymerase sigma70 subunit. J Mol Biol 1998;284:1353-1365.
    • (1998) J Mol Biol , vol.284 , pp. 1353-1365
    • Lonetto, M.A.1    Rhodius, V.2    Lamberg, K.3    Kiley, P.4    Busby, S.5    Gross, C.6
  • 5
    • 0024974082 scopus 로고
    • Characterization of the Escherichia coli transcription factor sigma 70: Localization of a region involved in the interaction with core RNA polymerase
    • Lesley SA, Burgess RR: Characterization of the Escherichia coli transcription factor sigma 70: localization of a region involved in the interaction with core RNA polymerase. Biochemistry 1989;28:7728-7734.
    • (1989) Biochemistry , vol.28 , pp. 7728-7734
    • Lesley, S.A.1    Burgess, R.R.2
  • 7
  • 8
    • 0037123659 scopus 로고    scopus 로고
    • Structural basis of transcription initiation: RNA polymerase holoenzyme at 4 Å resolution
    • Murakami KS, Masuda S, Darst SA: Structural basis of transcription initiation: RNA polymerase holoenzyme at 4 Å resolution. Science 2002;296:1280-1284.
    • (2002) Science , vol.296 , pp. 1280-1284
    • Murakami, K.S.1    Masuda, S.2    Darst, S.A.3
  • 11
    • 0029116754 scopus 로고
    • Mitochondrial transcription initiation: Promoter structures and RNA polymerases
    • Tracy RL, Stern DB: Mitochondrial transcription initiation: promoter structures and RNA polymerases. Curr Genet 1995;28:205-216.
    • (1995) Curr Genet , vol.28 , pp. 205-216
    • Tracy, R.L.1    Stern, D.B.2
  • 12
    • 0034202992 scopus 로고    scopus 로고
    • The role of sigma factors in plastid transcription
    • Allison LA: The role of sigma factors in plastid transcription. Biochimie 2000;82:537-548.
    • (2000) Biochimie , vol.82 , pp. 537-548
    • Allison, L.A.1
  • 13
    • 0036132584 scopus 로고    scopus 로고
    • An inventory of genes encoding RNA polymerase sigma factors in 31 completely sequenced eubacterial genomes
    • Mittenhuber G: An inventory of genes encoding RNA polymerase sigma factors in 31 completely sequenced eubacterial genomes. J Mol Microbiol Biotechnol 2002;4:77-91.
    • (2002) J Mol Microbiol Biotechnol , vol.4 , pp. 77-91
    • Mittenhuber, G.1
  • 14
    • 0026612797 scopus 로고
    • The sigma 70 family: Sequence conservation and evolutionary relationships
    • Lonetto M, Gribskov M, Gross CA: The sigma 70 family: sequence conservation and evolutionary relationships. J Bacteriol 1992;174:3843-3849.
    • (1992) J Bacteriol , vol.174 , pp. 3843-3849
    • Lonetto, M.1    Gribskov, M.2    Gross, C.A.3
  • 15
    • 0028913136 scopus 로고
    • Fluorescence resonance energy transfer
    • Selvin PR: Fluorescence resonance energy transfer. Methods Enzymol 1995;246:300-334.
    • (1995) Methods Enzymol , vol.246 , pp. 300-334
    • Selvin, P.R.1
  • 16
    • 0033823060 scopus 로고    scopus 로고
    • The renaissance of fluorescence resonance energy transfer
    • Selvin PR: The renaissance of fluorescence resonance energy transfer. Nat Struct Biol 2000;7:730-734.
    • (2000) Nat Struct Biol , vol.7 , pp. 730-734
    • Selvin, P.R.1
  • 17
    • 0017795758 scopus 로고
    • Fluorescence energy transfer as a spectroscopic ruler
    • Stryer L: Fluorescence energy transfer as a spectroscopic ruler. Annu Rev Biochem 1978;47:819-846.
    • (1978) Annu Rev Biochem , vol.47 , pp. 819-846
    • Stryer, L.1
  • 18
    • 0034807765 scopus 로고    scopus 로고
    • Luminescence resonance energy transfer analysis of RNA polymerase complexes
    • Heyduk T: Luminescence resonance energy transfer analysis of RNA polymerase complexes. Methods 2001;25:44-53.
    • (2001) Methods , vol.25 , pp. 44-53
    • Heyduk, T.1
  • 19
    • 0002199022 scopus 로고    scopus 로고
    • Luminescent lanthanide chelates for improved resonance energy transfer and application to biology
    • Rettig W, Strehmel B, Schrader S, eds, pp, Springer Verlag, New York
    • Selvin PR: Luminescent lanthanide chelates for improved resonance energy transfer and application to biology. In: Applied Fluorescence in Chemistry, Biology and Medicine (Rettig W, Strehmel B, Schrader S, eds.), pp. 457-487. Springer Verlag, New York, 1999.
    • (1999) Applied Fluorescence in Chemistry, Biology and Medicine , pp. 457-487
    • Selvin, P.R.1
  • 20
    • 0035199725 scopus 로고    scopus 로고
    • Cacofurans A and B, new furanoditerpenes from a marine sponge
    • Tanaka J, Marriott G, Higa T: Cacofurans A and B, new furanoditerpenes from a marine sponge. J Nat Prod 2001;64:1468-1470.
    • (2001) J Nat Prod , vol.64 , pp. 1468-1470
    • Tanaka, J.1    Marriott, G.2    Higa, T.3
  • 21
    • 0037102326 scopus 로고    scopus 로고
    • Oncolumn tris(2-carboxyethyl)phosphine reduction and IC5-maleimide labeling during purification of a RpoC fragment on a nickel-nitrilotriacetic acid column
    • Bergendahl V, Anthony LC, Heyduk T, Burgess RR: Oncolumn tris(2-carboxyethyl)phosphine reduction and IC5-maleimide labeling during purification of a RpoC fragment on a nickel-nitrilotriacetic acid column. Anal Biochem 2002;307:368-374.
    • (2002) Anal Biochem , vol.307 , pp. 368-374
    • Bergendahl, V.1    Anthony, L.C.2    Heyduk, T.3    Burgess, R.R.4
  • 22
    • 0033524508 scopus 로고    scopus 로고
    • Architecture of a complex between the sigma70 subunit of Escherichia coli RNA polymerase and the nontemplate strand oligonucleotide. Luminescence resonance energy transfer study
    • Heyduk E, Heyduk T: Architecture of a complex between the sigma70 subunit of Escherichia coli RNA polymerase and the nontemplate strand oligonucleotide. Luminescence resonance energy transfer study. J Biol Chem 1999;274:3315-3322.
    • (1999) J Biol Chem , vol.274 , pp. 3315-3322
    • Heyduk, E.1    Heyduk, T.2
  • 23
    • 0026702168 scopus 로고
    • Isolation and characterization of a polyol-responsive monoclonal antibody useful for gentle purification of Escherichia coli RNA polymerase
    • Thompson NE, Hager DA, Burgess RR: Isolation and characterization of a polyol-responsive monoclonal antibody useful for gentle purification of Escherichia coli RNA polymerase. Biochemistry 1992;31:7003-7008.
    • (1992) Biochemistry , vol.31 , pp. 7003-7008
    • Thompson, N.E.1    Hager, D.A.2    Burgess, R.R.3
  • 24
    • 33747153584 scopus 로고    scopus 로고
    • Time-resolved fluorescence resonance energy transfer kinase assays using physiological protein substrates: Applications of terbium-fluorescein and terbium-green fluorescent protein fluorescence resonance energy transfer pairs
    • Riddle SM, Vedvik KL, Hanson GT, Vogel KW: Time-resolved fluorescence resonance energy transfer kinase assays using physiological protein substrates: applications of terbium-fluorescein and terbium-green fluorescent protein fluorescence resonance energy transfer pairs. Anal Biochem 2006;356:108-116.
    • (2006) Anal Biochem , vol.356 , pp. 108-116
    • Riddle, S.M.1    Vedvik, K.L.2    Hanson, G.T.3    Vogel, K.W.4
  • 25
    • 0029834733 scopus 로고    scopus 로고
    • Quantitative analysis of transcriptional pausing by Escherichia coli RNA polymerase: His leader pause site as paradigm
    • Landick R, Wang D, Chan CL: Quantitative analysis of transcriptional pausing by Escherichia coli RNA polymerase: his leader pause site as paradigm. Methods Enzymol 1996;274:334-353.
    • (1996) Methods Enzymol , vol.274 , pp. 334-353
    • Landick, R.1    Wang, D.2    Chan, C.L.3
  • 26
    • 0021014246 scopus 로고
    • Overexpression and purification of the sigma subunit of Escherichia coli RNA polymerase
    • Gribskov M, Burgess RR: Overexpression and purification of the sigma subunit of Escherichia coli RNA polymerase. Gene 1983;26:109-118.
    • (1983) Gene , vol.26 , pp. 109-118
    • Gribskov, M.1    Burgess, R.R.2
  • 27
    • 0141539471 scopus 로고    scopus 로고
    • A cross-reactive polyol-responsive monoclonal antibody useful for isolation of core RNA polymerase from many bacterial species
    • Bergendahl V, Thompson NE, Foley KM, Olson BM, Burgess RR: A cross-reactive polyol-responsive monoclonal antibody useful for isolation of core RNA polymerase from many bacterial species. Protein Expr Purif 2003;31:155-160.
    • (2003) Protein Expr Purif , vol.31 , pp. 155-160
    • Bergendahl, V.1    Thompson, N.E.2    Foley, K.M.3    Olson, B.M.4    Burgess, R.R.5
  • 28
    • 3142533361 scopus 로고    scopus 로고
    • Antigen-binding properties of monoclonal antibodies reactive with human TATA-binding protein and use in immunoaffinity chromatography
    • Thompson NE, Foley KM, Burgess RR: Antigen-binding properties of monoclonal antibodies reactive with human TATA-binding protein and use in immunoaffinity chromatography. Protein Expr Purif 2004;36:186-197.
    • (2004) Protein Expr Purif , vol.36 , pp. 186-197
    • Thompson, N.E.1    Foley, K.M.2    Burgess, R.R.3
  • 29
    • 0024328155 scopus 로고
    • Inhibition of in vivo and in vitro transcription by monoclonal antibodies prepared against wheat germ RNA polymerase II that react with the heptapeptide repeat of eukaryotic RNA polymerase II
    • Thompson NE, Steinberg TH, Aronson DB, Burgess RR: Inhibition of in vivo and in vitro transcription by monoclonal antibodies prepared against wheat germ RNA polymerase II that react with the heptapeptide repeat of eukaryotic RNA polymerase II. J Biol Chem 1989;264:11511-11520.
    • (1989) J Biol Chem , vol.264 , pp. 11511-11520
    • Thompson, N.E.1    Steinberg, T.H.2    Aronson, D.B.3    Burgess, R.R.4
  • 30
    • 0023732884 scopus 로고
    • Factors involved in specific transcription by mammalian RNA polymerase II: Purification, genetic specificity, and TATA box-promoter interactions of TFIID
    • Nakajima N, Horikoshi M, Roeder RG: Factors involved in specific transcription by mammalian RNA polymerase II: purification, genetic specificity, and TATA box-promoter interactions of TFIID. Mol Cell Biol 1988;8:4028-4040.
    • (1988) Mol Cell Biol , vol.8 , pp. 4028-4040
    • Nakajima, N.1    Horikoshi, M.2    Roeder, R.G.3
  • 31
    • 17444385981 scopus 로고    scopus 로고
    • Chemical conditionality: A genetic strategy to probe organelle assembly
    • Ruiz N, Falcone B, Kahne D, Silhavy TJ: Chemical conditionality: a genetic strategy to probe organelle assembly. Cell 2005;121:307-317.
    • (2005) Cell , vol.121 , pp. 307-317
    • Ruiz, N.1    Falcone, B.2    Kahne, D.3    Silhavy, T.J.4
  • 32
    • 0033003760 scopus 로고    scopus 로고
    • A simple statistical parameter for use in evaluation and validation of high throughput screening assays
    • Zhang JH, Chung TD, Oldenburg KR: A simple statistical parameter for use in evaluation and validation of high throughput screening assays. J Biomol Screen 1999;4:67-73.
    • (1999) J Biomol Screen , vol.4 , pp. 67-73
    • Zhang, J.H.1    Chung, T.D.2    Oldenburg, K.R.3
  • 33
    • 33947589196 scopus 로고    scopus 로고
    • A sigma-core interaction of the RNA polymerase holoenzyme that enhances promoter escape
    • Leibman M, Hochschild A: A sigma-core interaction of the RNA polymerase holoenzyme that enhances promoter escape. EMBO J 2007;26:1579-1590.
    • (2007) EMBO J , vol.26 , pp. 1579-1590
    • Leibman, M.1    Hochschild, A.2
  • 34
    • 15444366146 scopus 로고    scopus 로고
    • The interaction between sigma70 and the beta-flap of Escherichia coli RNA polymerase inhibits extension of nascent RNA during early elongation
    • Nickels BE, Garrity SJ, Mekler V, Minakhin L, Severinov K, Ebright RH, et al.: The interaction between sigma70 and the beta-flap of Escherichia coli RNA polymerase inhibits extension of nascent RNA during early elongation. Proc Natl Acad Sci U S A 2005;102:4488-4493.
    • (2005) Proc Natl Acad Sci U S A , vol.102 , pp. 4488-4493
    • Nickels, B.E.1    Garrity, S.J.2    Mekler, V.3    Minakhin, L.4    Severinov, K.5    Ebright, R.H.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.