-
1
-
-
0033593306
-
Molecular bases for circadian clocks
-
Dunlap JC (1999) Molecular bases for circadian clocks. Cell 96: 271-290.
-
(1999)
Cell
, vol.96
, pp. 271-290
-
-
Dunlap, J.C.1
-
2
-
-
0348083153
-
-
Dunlap JC, Loros JJ, DeCoursey PT, editors (, Sunderland Massachusetts, Sinauer Associates. 406 p
-
Dunlap JC, Loros JJ, DeCoursey PT, editors (2004) Chronobiology: Biological timekeeping. Sunderland (Massachusetts): Sinauer Associates. 406 p.
-
(2004)
Chronobiology: Biological timekeeping
-
-
-
4
-
-
4143114457
-
Chronopharmaceutics: Gimmick or clinically relevant approach to drug delivery?
-
Youan B-BC (2004) Chronopharmaceutics: Gimmick or clinically relevant approach to drug delivery? J Control Release 98: 337-353.
-
(2004)
J Control Release
, vol.98
, pp. 337-353
-
-
Youan, B.-B.C.1
-
5
-
-
31944443125
-
Molecular mechanism of cellautonomous circadian gene expression of Period2, a crucial regulator of the mammalian circadian clock
-
Akashi M, Ichise T, Mamine T, Takumi T (2006) Molecular mechanism of cellautonomous circadian gene expression of Period2, a crucial regulator of the mammalian circadian clock. Mol Biol Cell 17: 555-565.
-
(2006)
Mol Biol Cell
, vol.17
, pp. 555-565
-
-
Akashi, M.1
Ichise, T.2
Mamine, T.3
Takumi, T.4
-
6
-
-
0036758613
-
Differential resynchronization of circadian clock gene expression within the suprachiasmatic nuclei of mice subjected to experimental jet lag
-
Reddy AB, Field MD, Maywood ES, Hastings MH (2002) Differential resynchronization of circadian clock gene expression within the suprachiasmatic nuclei of mice subjected to experimental jet lag. J Neurosci 22: 7326-7330.
-
(2002)
J Neurosci
, vol.22
, pp. 7326-7330
-
-
Reddy, A.B.1
Field, M.D.2
Maywood, E.S.3
Hastings, M.H.4
-
7
-
-
0029991824
-
The temperature-compensated Goodwin model simulates many circadian clock properties
-
Ruoff P, Rensing L (1996) The temperature-compensated Goodwin model simulates many circadian clock properties. J Theor Biol 179: 275-285.
-
(1996)
J Theor Biol
, vol.179
, pp. 275-285
-
-
Ruoff, P.1
Rensing, L.2
-
8
-
-
0037178787
-
The orphan nuclear receptor Rev-Erbα controls circadian transcription within the positive limb of the mammalian circadian oscillator
-
Preitner N, Damiola F, Molina L-L, Zakany J, Duboule D, et al. (2002) The orphan nuclear receptor Rev-Erbα controls circadian transcription within the positive limb of the mammalian circadian oscillator. Cell 110: 251-260.
-
(2002)
Cell
, vol.110
, pp. 251-260
-
-
Preitner, N.1
Damiola, F.2
Molina, L.-L.3
Zakany, J.4
Duboule, D.5
-
9
-
-
33749319064
-
Differential effects of PER2 phosphorylation: Molecular basis for the human familial advanced sleep phase syndrome (FASPS)
-
Vanselow K, Vanselow JT, Westermark PO, Reischl S, Maier B, et al. (2006) Differential effects of PER2 phosphorylation: Molecular basis for the human familial advanced sleep phase syndrome (FASPS). Genes Dev 20: 2660-2672.
-
(2006)
Genes Dev
, vol.20
, pp. 2660-2672
-
-
Vanselow, K.1
Vanselow, J.T.2
Westermark, P.O.3
Reischl, S.4
Maier, B.5
-
10
-
-
0036178045
-
Control of intracellular dynamics of mammalian Period proteins by casein kinase I e (CKIe) and CKIδ in cultured cells
-
Akashi M, Tsuchiya Y, Yoshino T, Nishida E (2002) Control of intracellular dynamics of mammalian Period proteins by casein kinase I e (CKIe) and CKIδ in cultured cells. Mol Cell Biol 22: 1693-1703.
-
(2002)
Mol Cell Biol
, vol.22
, pp. 1693-1703
-
-
Akashi, M.1
Tsuchiya, Y.2
Yoshino, T.3
Nishida, E.4
-
11
-
-
0035966317
-
Posttranslational mechanisms regulate the mammalian circadian clock
-
Lee C, Etchegaray J-P, Cagapang FRA, Loudon SI, Reppert SM (2001) Posttranslational mechanisms regulate the mammalian circadian clock. Cell 107: 855-867.
-
(2001)
Cell
, vol.107
, pp. 855-867
-
-
Lee, C.1
Etchegaray, J.-P.2
Cagapang, F.R.A.3
Loudon, S.I.4
Reppert, S.M.5
-
12
-
-
0035047945
-
Molecular analysis of mammalian circadian rhythms
-
Reppert SM, Weaver DR (2001) Molecular analysis of mammalian circadian rhythms. Annu Rev Physiol 63: 647-676.
-
(2001)
Annu Rev Physiol
, vol.63
, pp. 647-676
-
-
Reppert, S.M.1
Weaver, D.R.2
-
13
-
-
0035368681
-
Nonredundant roles of the mPer1 and mPer2 genes in the mammalian circadian clock
-
Zheng B, Albrecht U, Kaasik K, Sage M, Vaishnav S, et al. (2001) Nonredundant roles of the mPer1 and mPer2 genes in the mammalian circadian clock. Cell 105: 683-694.
-
(2001)
Cell
, vol.105
, pp. 683-694
-
-
Zheng, B.1
Albrecht, U.2
Kaasik, K.3
Sage, M.4
Vaishnav, S.5
-
14
-
-
0035136677
-
An hPer2 phosphorylation site mutation in Familial Advanced Sleep Phase Syndrome
-
Toh KL, Jones CR, He Y, Eide EJ, Hinz WA, et al. (2001) An hPer2 phosphorylation site mutation in Familial Advanced Sleep Phase Syndrome. Science 291: 1040-1043.
-
(2001)
Science
, vol.291
, pp. 1040-1043
-
-
Toh, K.L.1
Jones, C.R.2
He, Y.3
Eide, E.J.4
Hinz, W.A.5
-
15
-
-
0033536228
-
The mPer2 gene encodes a functional component of the mammalian circadian clock
-
Zheng B, Larkin DW, Albrecht U, Sun ZS, Sage M, et al. (1999) The mPer2 gene encodes a functional component of the mammalian circadian clock. Nature 400: 169-173.
-
(1999)
Nature
, vol.400
, pp. 169-173
-
-
Zheng, B.1
Larkin, D.W.2
Albrecht, U.3
Sun, Z.S.4
Sage, M.5
-
16
-
-
0034989269
-
Differential functions of mPer1, mPer2 and mPer3 in the SCN circadian clock
-
Bae K, Jin X, Maywood ES, Hastings MH, Reppert SM, et al. (2001) Differential functions of mPer1, mPer2 and mPer3 in the SCN circadian clock. Neuron 30: 525-536.
-
(2001)
Neuron
, vol.30
, pp. 525-536
-
-
Bae, K.1
Jin, X.2
Maywood, E.S.3
Hastings, M.H.4
Reppert, S.M.5
-
17
-
-
0032758081
-
A simple model of circadian rhythm based on dimerization and proetolysis of PER and TIM
-
Tyson JJ, Hong CI, Thron CD, Novak B (1999) A simple model of circadian rhythm based on dimerization and proetolysis of PER and TIM. Biophys J 77: 2411-2417.
-
(1999)
Biophys J
, vol.77
, pp. 2411-2417
-
-
Tyson, J.J.1
Hong, C.I.2
Thron, C.D.3
Novak, B.4
-
18
-
-
0344736694
-
A detailed predictive model of the mammalian circadian clock
-
Forger D, Peskin C (2003) A detailed predictive model of the mammalian circadian clock. Proc Natl Acad Sci U S A 100: 14806-14811.
-
(2003)
Proc Natl Acad Sci U S A
, vol.100
, pp. 14806-14811
-
-
Forger, D.1
Peskin, C.2
-
19
-
-
0029094843
-
A model for circadian oscillations in the Drosophila Period protein (PER)
-
Goldbeter A (1995) A model for circadian oscillations in the Drosophila Period protein (PER). Proc R Soc London Ser B 261: 319-324.
-
(1995)
Proc R Soc London Ser B
, vol.261
, pp. 319-324
-
-
Goldbeter, A.1
-
20
-
-
0037795575
-
Toward a detailed computational model for the mammalian circadian clock
-
Leloup J-C, Goldbeter A (2003) Toward a detailed computational model for the mammalian circadian clock. Proc Natl Acad Sci U S A 100: 7051-7056.
-
(2003)
Proc Natl Acad Sci U S A
, vol.100
, pp. 7051-7056
-
-
Leloup, J.-C.1
Goldbeter, A.2
-
21
-
-
0035927611
-
Robust oscillations within the interlocked feedback model of Drosophila circadian rhythm
-
Ueda HR, Hagiwara M, Kitano H (2001) Robust oscillations within the interlocked feedback model of Drosophila circadian rhythm. J Theor Biol 210: 401-406.
-
(2001)
J Theor Biol
, vol.210
, pp. 401-406
-
-
Ueda, H.R.1
Hagiwara, M.2
Kitano, H.3
-
22
-
-
24944460267
-
Differential control of Bmal1 circadian transcription by REV-ERB and ROR nuclear receptors
-
Guillaumond F, Dardente H, Giguere V, Cermakian N. (2005) Differential control of Bmal1 circadian transcription by REV-ERB and ROR nuclear receptors. J Biol Rhythms 20: 391-403.
-
(2005)
J Biol Rhythms
, vol.20
, pp. 391-403
-
-
Guillaumond, F.1
Dardente, H.2
Giguere, V.3
Cermakian, N.4
-
23
-
-
0037466509
-
Sensitivity analysis of stoichiometric networks: An extension of metabolic control analysis to non-steady state trajectories
-
Ingalls BP, Sauro HM (2003) Sensitivity analysis of stoichiometric networks: An extension of metabolic control analysis to non-steady state trajectories. J Theor Biol 222: 23-36.
-
(2003)
J Theor Biol
, vol.222
, pp. 23-36
-
-
Ingalls, B.P.1
Sauro, H.M.2
-
24
-
-
17644427530
-
Sensitivity analysis of parameters controlling oscillatory signalling in the NFκB pathway: The roles of IKK and IκBα
-
Ihekwaba AEC, Broomhead DS, Grimley RL, Benson N, Kell DB (2004) Sensitivity analysis of parameters controlling oscillatory signalling in the NFκB pathway: The roles of IKK and IκBα. Syst Biol 1: 93-103.
-
(2004)
Syst Biol
, vol.1
, pp. 93-103
-
-
Ihekwaba, A.E.C.1
Broomhead, D.S.2
Grimley, R.L.3
Benson, N.4
Kell, D.B.5
-
25
-
-
4444301677
-
Modeling the mammmalian circadian clock: Sensitivity analysis and multiplicity of oscillatory mechanisms
-
Leloup J-C, Goldbeter A (2004) Modeling the mammmalian circadian clock: Sensitivity analysis and multiplicity of oscillatory mechanisms. J Theor Biol 230: 541-562.
-
(2004)
J Theor Biol
, vol.230
, pp. 541-562
-
-
Leloup, J.-C.1
Goldbeter, A.2
-
27
-
-
33645642280
-
Autonomously oscillating biochemical systems: Parametric sensitivities of extrema and period
-
Ingalls BP (2004) Autonomously oscillating biochemical systems: Parametric sensitivities of extrema and period. IEE Systems Biology 1: 62-70.
-
(2004)
IEE Systems Biology
, vol.1
, pp. 62-70
-
-
Ingalls, B.P.1
-
30
-
-
0012744123
-
Sensitivity Analysis of autonomous oscillators. Separation of secular terms and determination of structural stability
-
Larter R (1983) Sensitivity Analysis of autonomous oscillators. Separation of secular terms and determination of structural stability. J Phys Chem 87: 3114-3121.
-
(1983)
J Phys Chem
, vol.87
, pp. 3114-3121
-
-
Larter, R.1
-
31
-
-
34248566788
-
Fbxl3 controls the oscillation of the circadian clock by directing the degradation of cryptochrome proteins
-
Fbxl3 controls the oscillation of the circadian clock by directing the degradation of cryptochrome proteins. Science 316: 900-904.
-
(2007)
Science
, vol.316
, pp. 900-904
-
-
Busino, L.1
Bassermann, F.2
Maiolica, A.3
Lee, C.4
Nolan, P.M.5
-
33
-
-
33747894288
-
Circadian rhythm: A natural, robust, multi-scale control system
-
Doyle FJ III, Gunawan R, Bagheri N, Mirsky Ha, To TL (2006) Circadian rhythm: A natural, robust, multi-scale control system. Comput Chem Eng 30: 1700-1711.
-
(2006)
Comput Chem Eng
, vol.30
, pp. 1700-1711
-
-
Doyle III, F.J.1
Gunawan, R.2
Bagheri, N.3
Mirsky, H.4
To, T.L.5
-
34
-
-
4143142003
-
A functional genomics strategy reveals Rora as a component of the mammalian circadian clock
-
Sato TK, Panda S, Miraglia LJ, Reyes TM, Rudic RD, et al. (2004) A functional genomics strategy reveals Rora as a component of the mammalian circadian clock. Neuron 43: 527-537.
-
(2004)
Neuron
, vol.43
, pp. 527-537
-
-
Sato, T.K.1
Panda, S.2
Miraglia, L.J.3
Reyes, T.M.4
Rudic, R.D.5
-
35
-
-
13844294211
-
The casein kinase 1 family: Participation in multiple cellular processes in eukaryotes
-
Knippschild U, Gocht A, Wolff S, Huber N, Lohler J, et al. (2005) The casein kinase 1 family: Participation in multiple cellular processes in eukaryotes. Cell Signal 17: 675-689.
-
(2005)
Cell Signal
, vol.17
, pp. 675-689
-
-
Knippschild, U.1
Gocht, A.2
Wolff, S.3
Huber, N.4
Lohler, J.5
-
36
-
-
32644451364
-
CKI, there's more than one: Casein kinase I family members in Wnt and Hedgehog signaling
-
Price MA (2006) CKI, there's more than one: Casein kinase I family members in Wnt and Hedgehog signaling. Genes Dev 20: 399-410.
-
(2006)
Genes Dev
, vol.20
, pp. 399-410
-
-
Price, M.A.1
-
37
-
-
15844420887
-
Functional consequences of a CKIδ mutation causing familial advanced sleep phase syndrome
-
Xu Y, Padiath QS, Shapiro RE, Jones CR, Wu SC, et al. (2005) Functional consequences of a CKIδ mutation causing familial advanced sleep phase syndrome. Nature 434: 640-644.
-
(2005)
Nature
, vol.434
, pp. 640-644
-
-
Xu, Y.1
Padiath, Q.S.2
Shapiro, R.E.3
Jones, C.R.4
Wu, S.C.5
-
38
-
-
0034697099
-
Positional syntenic cloning and functional characterization of the mammalian circadian mutation tau
-
Lowrey PL, Shimomura K, Antoch MP, Yamazaki S, Zemenides PD, et al. (2000) Positional syntenic cloning and functional characterization of the mammalian circadian mutation tau. Science 288: 483-492.
-
(2000)
Science
, vol.288
, pp. 483-492
-
-
Lowrey, P.L.1
Shimomura, K.2
Antoch, M.P.3
Yamazaki, S.4
Zemenides, P.D.5
-
39
-
-
33746041826
-
An opposite role for tau in circadian rhythms revealed by mathematical modeling
-
Gallego M, Eide EJ, Woolf MF, Virshup DM, Forger DB (2006) An opposite role for tau in circadian rhythms revealed by mathematical modeling. Proc Natl Acad Sci U S A 103: 10618-10623.
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 10618-10623
-
-
Gallego, M.1
Eide, E.J.2
Woolf, M.F.3
Virshup, D.M.4
Forger, D.B.5
-
41
-
-
0033603542
-
Stability, precision, and the near-24-hour period of the human circadian pacemaker
-
Czeisler CA, Duffy JF, Shanahan TL, Brown EN, Mitchell JF, et al. (1999) Stability, precision, and the near-24-hour period of the human circadian pacemaker. Science 284: 2177-2181.
-
(1999)
Science
, vol.284
, pp. 2177-2181
-
-
Czeisler, C.A.1
Duffy, J.F.2
Shanahan, T.L.3
Brown, E.N.4
Mitchell, J.F.5
-
42
-
-
0035923723
-
Intrinsic near-24-h pacemaker period determies limits of circadian entrainment to a weak synchronizer in humans
-
Wright KP Jr, Highes RJ, Kronauer E, Dijk D-J, et al. (2001) Intrinsic near-24-h pacemaker period determies limits of circadian entrainment to a weak synchronizer in humans. Proc Natl Acad Sci U S A 98: 14027-14032.
-
(2001)
Proc Natl Acad Sci U S A
, vol.98
, pp. 14027-14032
-
-
Wright Jr, K.P.1
Highes, R.J.2
Kronauer, E.3
Dijk, D.-J.4
-
43
-
-
0345596433
-
A differential response of two putative mammalian circadian regulators, mper1 and mper2, to light
-
Albrecht U, Sun ZS, Eichele G, Lee CC (1997) A differential response of two putative mammalian circadian regulators, mper1 and mper2, to light. Cell 91: 1055-1064.
-
(1997)
Cell
, vol.91
, pp. 1055-1064
-
-
Albrecht, U.1
Sun, Z.S.2
Eichele, G.3
Lee, C.C.4
-
44
-
-
0001374796
-
NITSOL: A Newton iterative solver for nonlinear systems
-
Pernice M, Walker HF (1998) NITSOL: A Newton iterative solver for nonlinear systems. SIAM J Sci Comput 19: 302-318.
-
(1998)
SIAM J Sci Comput
, vol.19
, pp. 302-318
-
-
Pernice, M.1
Walker, H.F.2
-
46
-
-
15744389129
-
Sensitivity analysis of oscillatory (bio)chemical systems
-
Zak DE, Stelling J, Doyle FJ III (2005) Sensitivity analysis of oscillatory (bio)chemical systems. Comput Chem Eng 29: 663-673.
-
(2005)
Comput Chem Eng
, vol.29
, pp. 663-673
-
-
Zak, D.E.1
Stelling, J.2
Doyle III, F.J.3
|