메뉴 건너뛰기




Volumn 46, Issue 47, 2007, Pages 13629-13637

An allosteric intramolecular PDZ-PDZ interaction modulates PTP-BL PDZ2 binding specificity

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACIDS; LIGANDS;

EID: 36749069824     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi700954e     Document Type: Article
Times cited : (55)

References (45)
  • 1
    • 0037453510 scopus 로고    scopus 로고
    • Assembly of cell regulatory systems through protein interaction domains
    • Pawson, T., and Nash, P. (2003) Assembly of cell regulatory systems through protein interaction domains, Science 300, 445-452.
    • (2003) Science , vol.300 , pp. 445-452
    • Pawson, T.1    Nash, P.2
  • 2
    • 0037503653 scopus 로고    scopus 로고
    • PDZ domains - glue and guide
    • van Ham, M., and Hendriks, W. (2003) PDZ domains - glue and guide, Mol. Biol. Rep. 30, 69-82.
    • (2003) Mol. Biol. Rep , vol.30 , pp. 69-82
    • van Ham, M.1    Hendriks, W.2
  • 4
    • 0035834678 scopus 로고    scopus 로고
    • Distinct binding specificity of the multiple PDZ domains of INADL, a human protein with homology to INAD from Drosophila melanogaster
    • Vaccaro, P., Brannetti, B., Montecchi-Palazzi, L., Philipp, S., Citterich, M. H., Cesareni, G., and Dente, L. (2001) Distinct binding specificity of the multiple PDZ domains of INADL, a human protein with homology to INAD from Drosophila melanogaster, J. Biol. Chem. 276, 42122-42130.
    • (2001) J. Biol. Chem , vol.276 , pp. 42122-42130
    • Vaccaro, P.1    Brannetti, B.2    Montecchi-Palazzi, L.3    Philipp, S.4    Citterich, M.H.5    Cesareni, G.6    Dente, L.7
  • 6
    • 0037070149 scopus 로고    scopus 로고
    • PDZ domains: Troubles in classification
    • Vaccaro, P., and Dente, L. (2002) PDZ domains: troubles in classification, FEBS Lett. 512, 345-349.
    • (2002) FEBS Lett , vol.512 , pp. 345-349
    • Vaccaro, P.1    Dente, L.2
  • 8
    • 0347510642 scopus 로고    scopus 로고
    • The protein tyrosine phosphatase PTP-Basophil/Basophil-like; Interacting proteins and molecular functions
    • Erdmann, K. S. (2003) The protein tyrosine phosphatase PTP-Basophil/Basophil-like; Interacting proteins and molecular functions, Eur. J. Biochem. 270, 4789-4798.
    • (2003) Eur. J. Biochem , vol.270 , pp. 4789-4798
    • Erdmann, K.S.1
  • 9
    • 0242407128 scopus 로고    scopus 로고
    • Tandem PDZ repeats in glutamate receptor-interacting proteins have a novel mode of PDZ domain-mediated target binding
    • Feng, W., Shi, Y., Li, M., and Zhang, M. (2003) Tandem PDZ repeats in glutamate receptor-interacting proteins have a novel mode of PDZ domain-mediated target binding, Nat. Struct. Biol. 10, 972-978.
    • (2003) Nat. Struct. Biol , vol.10 , pp. 972-978
    • Feng, W.1    Shi, Y.2    Li, M.3    Zhang, M.4
  • 11
    • 0037436384 scopus 로고    scopus 로고
    • Supramodular structure and synergistic target binding of the N-terminal tandem PDZ domains of PSD-95
    • Long, J. F., Tochio, H., Wang, P., Fan, J. S., Sala, C., Niethammer, M., Sheng, M., and Zhang, M. (2003) Supramodular structure and synergistic target binding of the N-terminal tandem PDZ domains of PSD-95, J. Mol. Biol. 327, 203-214.
    • (2003) J. Mol. Biol , vol.327 , pp. 203-214
    • Long, J.F.1    Tochio, H.2    Wang, P.3    Fan, J.S.4    Sala, C.5    Niethammer, M.6    Sheng, M.7    Zhang, M.8
  • 12
    • 0034733733 scopus 로고    scopus 로고
    • Syntenin-syndecan binding requires syndecan-synteny and the co-operation of both PDZ domains of syntenin
    • Grootjans, J. J., Reekmans, G., Ceulemans, H., and David, G. (2000) Syntenin-syndecan binding requires syndecan-synteny and the co-operation of both PDZ domains of syntenin, J. Biol. Chem. 275, 19933-19941.
    • (2000) J. Biol. Chem , vol.275 , pp. 19933-19941
    • Grootjans, J.J.1    Reekmans, G.2    Ceulemans, H.3    David, G.4
  • 13
    • 0035970113 scopus 로고    scopus 로고
    • Regulation of cystic fibrosis transmembrane conductance regulator single-channel gating by bivalent PDZ-domain-mediated interaction
    • Raghuram, V., Mak, D. D., and Foskett, J. K. (2001) Regulation of cystic fibrosis transmembrane conductance regulator single-channel gating by bivalent PDZ-domain-mediated interaction, Proc. Natl. Acad. Sci. U.S.A. 98, 1300-1305.
    • (2001) Proc. Natl. Acad. Sci. U.S.A , vol.98 , pp. 1300-1305
    • Raghuram, V.1    Mak, D.D.2    Foskett, J.K.3
  • 16
    • 0031916105 scopus 로고    scopus 로고
    • PDZ motifs in PTP-BL and RIL bind to internal protein segments in the LIM domain protein RIL
    • Cuppen, E., Gerrits, H., Pepers, B., Wieringa, B., and Hendriks, W. (1998) PDZ motifs in PTP-BL and RIL bind to internal protein segments in the LIM domain protein RIL, Mol. Biol. Cell 9, 671-683.
    • (1998) Mol. Biol. Cell , vol.9 , pp. 671-683
    • Cuppen, E.1    Gerrits, H.2    Pepers, B.3    Wieringa, B.4    Hendriks, W.5
  • 18
    • 33750795402 scopus 로고    scopus 로고
    • Evaluation of energetic and dynamic coupling networks in a PDZ domain protein
    • Fuentes, E. J., Gilmore, S. A., Mauldin, R. V., and Lee, A. L. (2006) Evaluation of energetic and dynamic coupling networks in a PDZ domain protein, J. Mol. Biol. 364, 337-351.
    • (2006) J. Mol. Biol , vol.364 , pp. 337-351
    • Fuentes, E.J.1    Gilmore, S.A.2    Mauldin, R.V.3    Lee, A.L.4
  • 19
    • 0347753736 scopus 로고    scopus 로고
    • Ligand-dependent dynamics and intramolecular signaling in a PDZ domain
    • Fuentes, E. J., Der, C. J., and Lee, A. L. (2004) Ligand-dependent dynamics and intramolecular signaling in a PDZ domain, J. Mol. Biol. 335, 1105-1115.
    • (2004) J. Mol. Biol , vol.335 , pp. 1105-1115
    • Fuentes, E.J.1    Der, C.J.2    Lee, A.L.3
  • 20
    • 0027212498 scopus 로고
    • Solubilization and purification of enzymatically active glutathione S-transferase (pGEX) fusion proteins
    • Frangioni, J. V., and Neel, B. G. (1993) Solubilization and purification of enzymatically active glutathione S-transferase (pGEX) fusion proteins, Anal. Biochem. 210, 179-187.
    • (1993) Anal. Biochem , vol.210 , pp. 179-187
    • Frangioni, J.V.1    Neel, B.G.2
  • 22
    • 0029400480 scopus 로고
    • NMRPipe: A multidimensional spectral processing system based on UNIX pipes
    • Delaglio, F., Grzesiek, S., Vuister, G. W., Zhu, G., Pfeifer, J., and Bax, A. (1995) NMRPipe: a multidimensional spectral processing system based on UNIX pipes, J. Biomol. NMR 6, 277-293.
    • (1995) J. Biomol. NMR , vol.6 , pp. 277-293
    • Delaglio, F.1    Grzesiek, S.2    Vuister, G.W.3    Zhu, G.4    Pfeifer, J.5    Bax, A.6
  • 23
    • 0343459675 scopus 로고
    • The program XEASY for computer-supported NMR spectral analysis of biological macromolecules
    • Bartels, C. H., Xia, T.-H., Billeter, M., Guntert, P., and Wuthrich, K. (1995) The program XEASY for computer-supported NMR spectral analysis of biological macromolecules, J. Biomol. NMR 6, 1-10.
    • (1995) J. Biomol. NMR , vol.6 , pp. 1-10
    • Bartels, C.H.1    Xia, T.-H.2    Billeter, M.3    Guntert, P.4    Wuthrich, K.5
  • 24
    • 0038714883 scopus 로고    scopus 로고
    • Cloning and characterization of mCRIP2, a mouse LIM-only protein that interacts with PDZ domain IV of PTP-BL
    • van Ham, M., Croes, H., Schepens, J., Fransen, J., Wieringa, B., and Hendriks, W. (2003) Cloning and characterization of mCRIP2, a mouse LIM-only protein that interacts with PDZ domain IV of PTP-BL, Genes Cells 8, 631-644.
    • (2003) Genes Cells , vol.8 , pp. 631-644
    • van Ham, M.1    Croes, H.2    Schepens, J.3    Fransen, J.4    Wieringa, B.5    Hendriks, W.6
  • 25
    • 22144439438 scopus 로고    scopus 로고
    • Redox-regulated affinity of the third PDZ domain in the phosphotyrosine phosphatase PTP-BL for cysteine-containing target peptides
    • van den Berk, L. C. J., Landi, E., Harmsen, E., Dente, L., and Hendriks, W. J. A. J. (2005) Redox-regulated affinity of the third PDZ domain in the phosphotyrosine phosphatase PTP-BL for cysteine-containing target peptides, FEBS J. 272, 3306-3316.
    • (2005) FEBS J , vol.272 , pp. 3306-3316
    • van den Berk, L.C.J.1    Landi, E.2    Harmsen, E.3    Dente, L.4    Hendriks, W.J.A.J.5
  • 26
    • 0032572532 scopus 로고    scopus 로고
    • Coordination of an array of signaling proteins through homo- and heteromeric interactions between PDZ domains and target proteins
    • Xu, X.-Z. S., Choudhury, A., Li, X., and Montell, C. (1998) Coordination of an array of signaling proteins through homo- and heteromeric interactions between PDZ domains and target proteins, J. Cell Biol. 142, 545-555.
    • (1998) J. Cell Biol , vol.142 , pp. 545-555
    • Xu, X.-Z.S.1    Choudhury, A.2    Li, X.3    Montell, C.4
  • 27
    • 0034637561 scopus 로고    scopus 로고
    • Evidence for ezrin-radixin-moesin-binding phosphoprotein 50 (EBP50) self-association through PDZ-PDZ interactions
    • Fouassier, L., Yun, C. C., Fitz, J. G., and Doctor, R. B. (2000) Evidence for ezrin-radixin-moesin-binding phosphoprotein 50 (EBP50) self-association through PDZ-PDZ interactions, J. Biol. Chem. 275, 25039-25045.
    • (2000) J. Biol. Chem , vol.275 , pp. 25039-25045
    • Fouassier, L.1    Yun, C.C.2    Fitz, J.G.3    Doctor, R.B.4
  • 29
    • 0348111461 scopus 로고    scopus 로고
    • Crystal structure of the Shank PDZ-ligand complex reveals a class I PDZ interaction and a novel PDZ-PDZ dimerization
    • Im, Y. J., Lee, J. H., Park, S. H., Park, S. J., Rho, S. H., Kang, G. B., Kim, E., and Eom, S. H. (2003) Crystal structure of the Shank PDZ-ligand complex reveals a class I PDZ interaction and a novel PDZ-PDZ dimerization, J. Biol. Chem. 278, 48099-48104.
    • (2003) J. Biol. Chem , vol.278 , pp. 48099-48104
    • Im, Y.J.1    Lee, J.H.2    Park, S.H.3    Park, S.J.4    Rho, S.H.5    Kang, G.B.6    Kim, E.7    Eom, S.H.8
  • 30
    • 24344467385 scopus 로고    scopus 로고
    • Solution structure of the second PDZ domain of the neuronal adaptor X11alpha and its interaction with the C-terminal peptide of the human copper chaperone for superoxide dismutase
    • Duquesne, A. E., Ruijter, M., Brouwer, J., Drijfhout, J. W., Nabuurs, S. B., Spronk, C. A., Vuister, G. W., Ubbink, M., and Canters, G. W. (2005) Solution structure of the second PDZ domain of the neuronal adaptor X11alpha and its interaction with the C-terminal peptide of the human copper chaperone for superoxide dismutase, J. Biomol. NMR 32, 209-218.
    • (2005) J. Biomol. NMR , vol.32 , pp. 209-218
    • Duquesne, A.E.1    Ruijter, M.2    Brouwer, J.3    Drijfhout, J.W.4    Nabuurs, S.B.5    Spronk, C.A.6    Vuister, G.W.7    Ubbink, M.8    Canters, G.W.9
  • 31
    • 0034632672 scopus 로고    scopus 로고
    • The adenomatous polyposis coli-protein (APC) interacts with the protein tyrosine phosphatase PTP-BL via an alternatively spliced PDZ domain
    • Erdmann, K. S., Kuhlmann, J., Lessmann, V., Hermann, L., Eulenburg, V., Müller, O., and Heumann, R. (2000) The adenomatous polyposis coli-protein (APC) interacts with the protein tyrosine phosphatase PTP-BL via an alternatively spliced PDZ domain, Oncogene 19, 3894-3901.
    • (2000) Oncogene , vol.19 , pp. 3894-3901
    • Erdmann, K.S.1    Kuhlmann, J.2    Lessmann, V.3    Hermann, L.4    Eulenburg, V.5    Müller, O.6    Heumann, R.7
  • 32
    • 0030763609 scopus 로고    scopus 로고
    • The PDZ domain of erythrocyte p55 mediates its binding to the cytoplasmic carboxyl terminus of glycophorin C
    • Marfatia, S. M., Morais-Cabral, J. H., Kim, A. C., Byron, O., and Chishti, A. H. (1997) The PDZ domain of erythrocyte p55 mediates its binding to the cytoplasmic carboxyl terminus of glycophorin C, J. Biol. Chem. 272, 24191-24197.
    • (1997) J. Biol. Chem , vol.272 , pp. 24191-24197
    • Marfatia, S.M.1    Morais-Cabral, J.H.2    Kim, A.C.3    Byron, O.4    Chishti, A.H.5
  • 33
    • 0031594886 scopus 로고    scopus 로고
    • Plasma membrane Ca2+ ATPase isoform 4b binds to membrane-associated guanylate kinase (MAGUK) proteins via their PDZ (PSD-95/Dlg/ZO-1) domains
    • Kim, E., DeMarco, S. J., Marfatia, S. M., Chishti, A. H., Sheng, M., and Strehler, E. E. (1998) Plasma membrane Ca2+ ATPase isoform 4b binds to membrane-associated guanylate kinase (MAGUK) proteins via their PDZ (PSD-95/Dlg/ZO-1) domains, J. Biol. Chem. 273, 1591-1595.
    • (1998) J. Biol. Chem , vol.273 , pp. 1591-1595
    • Kim, E.1    DeMarco, S.J.2    Marfatia, S.M.3    Chishti, A.H.4    Sheng, M.5    Strehler, E.E.6
  • 35
    • 0033555678 scopus 로고    scopus 로고
    • Association of protein-tyrosine phosphatase PTP-BAS with the transcription-factor-inhibitory protein IκBα through interaction between the PDZ1 domain and ankyrin repeats
    • Maekawa, K., Imagawa, N., Naito, A., Harada, S., Yoshie, O., and Takagi, S. (1999) Association of protein-tyrosine phosphatase PTP-BAS with the transcription-factor-inhibitory protein IκBα through interaction between the PDZ1 domain and ankyrin repeats, Biochem. J. 337, 179-184.
    • (1999) Biochem. J , vol.337 , pp. 179-184
    • Maekawa, K.1    Imagawa, N.2    Naito, A.3    Harada, S.4    Yoshie, O.5    Takagi, S.6
  • 36
    • 0032831897 scopus 로고    scopus 로고
    • Identification and molecular characterization of BP75, a novel bromodomain-containing protein
    • Cuppen, E., van Ham, M., Pepers, B., Wieringa, B., and Hendriks, W. (1999) Identification and molecular characterization of BP75, a novel bromodomain-containing protein, FEBS Lett. 459, 291-298.
    • (1999) FEBS Lett , vol.459 , pp. 291-298
    • Cuppen, E.1    van Ham, M.2    Pepers, B.3    Wieringa, B.4    Hendriks, W.5
  • 37
    • 0035843906 scopus 로고    scopus 로고
    • The protein kinase C-related kinase PRK2 interacts with the protein tyrosine phosphatase PTP-BL via a novel PDZ domain binding motif
    • Gross, C., Heumann, R., and Erdmann, K. S. (2001) The protein kinase C-related kinase PRK2 interacts with the protein tyrosine phosphatase PTP-BL via a novel PDZ domain binding motif, FEBS Lett. 496, 101-104.
    • (2001) FEBS Lett , vol.496 , pp. 101-104
    • Gross, C.1    Heumann, R.2    Erdmann, K.S.3
  • 39
    • 0030604722 scopus 로고    scopus 로고
    • Crystal structures of a complexed and peptide-free membrane protein-binding domain: Molecular basis of peptide recognition by PDZ
    • Doyle, D. A., Lee, A., Lewis, J., Kim, E., Sheng, M., and MacKinnon, R. (1996) Crystal structures of a complexed and peptide-free membrane protein-binding domain: molecular basis of peptide recognition by PDZ, Cell 85, 1067-1076.
    • (1996) Cell , vol.85 , pp. 1067-1076
    • Doyle, D.A.1    Lee, A.2    Lewis, J.3    Kim, E.4    Sheng, M.5    MacKinnon, R.6
  • 40
    • 0037816293 scopus 로고    scopus 로고
    • Molecular roots of degenerate specificity in syntenin's PDZ2 domain: Reassessment of the PDZ recognition paradigm
    • Kang, B. S., Cooper, D. R., Devedjiev, Y., Derewenda, U., and Derewenda, Z. S. (2003) Molecular roots of degenerate specificity in syntenin's PDZ2 domain: reassessment of the PDZ recognition paradigm, Structure (London) 11, 845-853.
    • (2003) Structure (London) , vol.11 , pp. 845-853
    • Kang, B.S.1    Cooper, D.R.2    Devedjiev, Y.3    Derewenda, U.4    Derewenda, Z.S.5
  • 42
    • 0033536602 scopus 로고    scopus 로고
    • Evolutionarily conserved pathways of energetic connectivity in protein families
    • Lockless, S. W., and Ranganathan, R. (1999) Evolutionarily conserved pathways of energetic connectivity in protein families, Science 286, 295-299.
    • (1999) Science , vol.286 , pp. 295-299
    • Lockless, S.W.1    Ranganathan, R.2
  • 43
    • 1642493671 scopus 로고    scopus 로고
    • A closed binding pocket and global destabilization modify the binding properties of an alternatively spliced form of the second PDZ domain of PTP-BL
    • Walma, T., Aelen, J., Nabuurs, S., Oostendorp, M., van den Berk, L., Hendriks, W., and Vuister, G. W. (2004) A closed binding pocket and global destabilization modify the binding properties of an alternatively spliced form of the second PDZ domain of PTP-BL, Structure (London) 12, 11-20.
    • (2004) Structure (London) , vol.12 , pp. 11-20
    • Walma, T.1    Aelen, J.2    Nabuurs, S.3    Oostendorp, M.4    van den Berk, L.5    Hendriks, W.6    Vuister, G.W.7
  • 44
    • 0037416217 scopus 로고    scopus 로고
    • Structure of Cdc42 in a complex with the GTPase-binding domain of the cell polarity protein, Par6
    • Garrard, S. M., Capaldo, C. T., Gao, L., Rosen, M. K., Macara, I. G., and Tomchick, D. R. (2003) Structure of Cdc42 in a complex with the GTPase-binding domain of the cell polarity protein, Par6, EMBO J. 22, 1125-1133.
    • (2003) EMBO J , vol.22 , pp. 1125-1133
    • Garrard, S.M.1    Capaldo, C.T.2    Gao, L.3    Rosen, M.K.4    Macara, I.G.5    Tomchick, D.R.6
  • 45
    • 1642276423 scopus 로고    scopus 로고
    • Cdc42 regulates the Par-6 PDZ domain through an allosteric CRIB-PDZ transition
    • Peterson, F. C., Penkert, R. R., Volkman, B. F., and Prehoda, K. E. (2004) Cdc42 regulates the Par-6 PDZ domain through an allosteric CRIB-PDZ transition, Mol. Cell 13, 665-676.
    • (2004) Mol. Cell , vol.13 , pp. 665-676
    • Peterson, F.C.1    Penkert, R.R.2    Volkman, B.F.3    Prehoda, K.E.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.