Structure, dynamics and binding characteristics of the second PDZ domain of PTP-BL

Journal of Molecular Biology

Volumn 316, Issue 5, 2002, Pages 1101-1110

  Walma, Tine ^a   Spronk, Christian A E M ^a   Tessari, Marco ^a   Aelen, Jan ^a   Schepens, Jan ^a   Hendriks, Wiljan ^a   Vuister, Geerten W ^a  

^a RADBOUD UNIVERSITY NIJMEGEN   (Netherlands)

Author keywords

Fas CD95; LIM; PDZ; PTP BL; Solution structure and dynamics

Indexed keywords

FAS ANTIGEN; GLUTAMIC ACID; PROTEIN; PROTEIN PDZ2; PROTEIN TYROSINE PHOSPHATASE; PROTEIN TYROSINE PHOSPHATASE BL; UNCLASSIFIED DRUG;

ALPHA HELIX; AMINO ACID SEQUENCE; ARTICLE; CARBOXY TERMINAL SEQUENCE; DYNAMICS; HYDROGEN BOND; PRIORITY JOURNAL; PROTEIN BINDING; PROTEIN DOMAIN; PROTEIN FOLDING; PROTEIN INTERACTION; PROTEIN SECONDARY STRUCTURE; PROTEIN TARGETING;

MURINAE;

EID: 0036300569     PISSN: 00222836     EISSN: None     Source Type: Journal    
DOI: 10.1006/jmbi.2002.5402     Document Type: Article

References (37)

1. Molecular cloning of a mouse epithelial protein-tyrosine phosphatase with similarities to submembranous proteins
2. PDZ motifs in PTP-BL and RIL bind to internal protein segments in the LIM domain protein RIL
3. The zyxin-related protein TRIP6 interacts with PDZ motifs in the adaptor protein RIL and the protein tyrosine phosphatase PTP-BL
4. Identification and molecular characterization of BP75, a novel bromo-domain-containing protein
5. The Adenomatous Polyposis Coli-protein (APC) interacts with the protein tyrosine phosphatase PTP-BL via an alternatively spliced PDZ domain
6. The protein kinase C-related kinase PRK2 interacts with the protein tyrosine phosphatase PTP-BL via a novel PDZ domain binding motif
7. FAP-1: A protein tyrosine phosphatase that associates with Fas
8. Characterization of the interactions between PDZ domains of the protein-tyrosine phosphatase PTPL1 and the carboxyl-terminal tail of Fas
9. No evidence for involvement of mouse protein-tyrosine phosphatase-BAS-like Fas-associated phosphatase-1 in Fas-mediated apoptosis
10. Association of protein-tyrosine phosphatase PTP-BAS with the transcription-factor-inhibitory protein IkappaBalpha through interaction between the PDZ1 domain and ankyrin repeats
11. Functional interaction of Fas-associated phosphatase-1 (FAP-1) with p75(NTR) and their effect on NF-kappaB activation
12. A novel GTPase-activating protein for Rho interacts with a PDZ domain of the protein-tyrosine phosphatase PTPL1
13. The carboxyl terminus of B class ephrins constitutes a PDZ domain binding motif
14. Recognition of unique carboxyl-terminal motifs by distinct PDZ domains
15. Interaction of nitric oxide synthase with the postsynaptic density protein PSD-95 and alpha1-syntrophin mediated by PDZ domains
16. + exchanger regulatory factor PDZ1 interaction with the carboxyl-terminal region of the cystic fibrosis transmembrane conductance regulator
17. Crystal structure of the hCASK PDZ domain reveals the structural basis of class II PDZ domain target recognition
18. Two distantly positioned PDZ domains mediate multivalent INAD-phospholipase C interactions essential for G protein-coupled signaling
19. Unexpected modes of PDZ domain scaffolding revealed by structure of nNOS-syntrophin complex
20. The neuronal nitric oxide synthase PDZ motif binds to -G(D,E)XV* carboxyterminal sequences
21. Cytokine-specific transcriptional regulation through an IL-5Ralpha interacting protein
22. PSD-95 assembles a ternary complex with the N-methyl-D-aspartic acid receptor and a bivalent neuronal NO synthase PDZ domain
23. AQUA and PROCHECK-NMR: Programs for checking the quality of protein structures solved by NMR
24. WHAT-IF: A molecular modeling and drug design program
25. Errors in protein structures
26. Model-free approach to the interpretation of nuclear magnetic resonance in macromolecules: 1. Theory and range of validity
27. Model-free approach to the interpretation of nuclear magnetic resonance in macromolecules: 2. Analysis of experimental results
28. Backbone dynamics of Escherichia coli ribonuclease HI: Correlations with structure and function in an active enzyme
29. A revised set of potentials for beta-turn formation in proteins
30. Improving the quality of protein structures determined by NMR spectroscopy
31. Solution structure of the PDZ2 domain from human phosphatase hPTP1E and its interactions with C-terminal peptides from the Fas receptor
32. Crystal structures of a complexed and peptide-free membrane protein-binding domain: Molecular basis of peptide recognition by PDZ
33. The crystal structure of domain 1 of receptor protein-tyrosine phosphatase mu
34. NMRPipe: A multidimensional spectral processing system based on UNIX pipes
35. The program XEASY for computer-supported NMR spectral analysis of biological macromolecules
36. MOLMOL: A program for display and analysis of macromolecular structures