메뉴 건너뛰기




Volumn 85, Issue 4, 2007, Pages 497-508

Characterization of breast cancer by array comparative genomic hybridization

Author keywords

Breast cancer; Chromosome aberrations; Comparative genomic hybridization arrays

Indexed keywords

BIOASSAY; BIOINFORMATICS; CHARACTERIZATION; GENES; PATIENT MONITORING; TUMORS;

EID: 34948833281     PISSN: 08298211     EISSN: None     Source Type: Journal    
DOI: 10.1139/O07-072     Document Type: Short Survey
Times cited : (38)

References (135)
  • 1
    • 0141994858 scopus 로고    scopus 로고
    • Genomic microarrays in human genetic disease and cancer
    • Albertson, D.G., and Pinkel, D. 2003. Genomic microarrays in human genetic disease and cancer. Hum. Mol. Genet. 2: R145-152.
    • (2003) Hum. Mol. Genet , vol.2
    • Albertson, D.G.1    Pinkel, D.2
  • 2
    • 0042166174 scopus 로고    scopus 로고
    • Chromosome aberrations in solid tumors
    • doi:10.1038/ng1215
    • Albertson, D.G., Collins, C., McCormick, F., and Gray, J.W. 2003. Chromosome aberrations in solid tumors. Nat. Genet. 34: 369-376. doi:10.1038/ng1215.
    • (2003) Nat. Genet , vol.34 , pp. 369-376
    • Albertson, D.G.1    Collins, C.2    McCormick, F.3    Gray, J.W.4
  • 3
    • 19944432091 scopus 로고    scopus 로고
    • A predictor based on the somatic genomic changes of the BRCA1/BRCA2 breast cancer tumors identifies the non-BRCA1/BRCA2 tumors with BRCA1 promoter hypermethylation
    • Alvarez, S., Diaz-Uriarte, R., Osorio, A., Barroso, A., Melchor, L., Paz, M.F., et al. 2005. A predictor based on the somatic genomic changes of the BRCA1/BRCA2 breast cancer tumors identifies the non-BRCA1/BRCA2 tumors with BRCA1 promoter hypermethylation. Clin. Cancer Res. 11: 1146-1153.
    • (2005) Clin. Cancer Res , vol.11 , pp. 1146-1153
    • Alvarez, S.1    Diaz-Uriarte, R.2    Osorio, A.3    Barroso, A.4    Melchor, L.5    Paz, M.F.6
  • 6
    • 2942729848 scopus 로고    scopus 로고
    • Gene expression profiles predict complete pathologic response to neoadjuvant paclitaxel and fluorouracil, doxorubicin., and cyclophosphamide chemotherapy in breast cancer
    • doi:10.1200/JCO.2004.05.166
    • Ayers, M., Symmans, W.F., Stec, J., Damokosh, A.I., Clark, E., Hess, K., et al. 2004. Gene expression profiles predict complete pathologic response to neoadjuvant paclitaxel and fluorouracil, doxorubicin., and cyclophosphamide chemotherapy in breast cancer. J. Clin. Oncol. 22: 2284-2293. doi:10.1200/JCO.2004.05.166.
    • (2004) J. Clin. Oncol , vol.22 , pp. 2284-2293
    • Ayers, M.1    Symmans, W.F.2    Stec, J.3    Damokosh, A.I.4    Clark, E.5    Hess, K.6
  • 7
    • 0037169357 scopus 로고    scopus 로고
    • Cancer as a complex genetic trait: Tumor susceptibility in humans and mouse models
    • doi:10.1016/S0092- 8674(02)00622-0
    • Balmain, A. 2002. Cancer as a complex genetic trait: tumor susceptibility in humans and mouse models. Cell, 108: 145-152. doi:10.1016/S0092- 8674(02)00622-0.
    • (2002) Cell , vol.108 , pp. 145-152
    • Balmain, A.1
  • 8
    • 0037370476 scopus 로고    scopus 로고
    • The genetics and genomics of cancer
    • doi:10.1038/ng1107
    • Balmain, A., Gray, J., and Ponder, B. 2003. The genetics and genomics of cancer. Nat. Genet. 33 (Suppl.): 238-244. doi:10.1038/ng1107.
    • (2003) Nat. Genet , vol.33 , Issue.SUPPL. , pp. 238-244
    • Balmain, A.1    Gray, J.2    Ponder, B.3
  • 10
    • 0036883717 scopus 로고    scopus 로고
    • Cloning of BCAS3 (17q23) and BCAS4 (20q13) genes that undergo amplification, overexpression, and fusion in breast cancer
    • doi:10.1002/gcc.10121
    • Bärlund, M., Monni, O., Weaver, J.D., Kauraniemi, P., Sauter, G., Heiskanen, M., Kallioniemi, O.P., and Kallioniemi, A. 2002. Cloning of BCAS3 (17q23) and BCAS4 (20q13) genes that undergo amplification, overexpression, and fusion in breast cancer. Genes Chromosomes Cancer, 35: 311-317. doi:10.1002/gcc.10121.
    • (2002) Genes Chromosomes Cancer , vol.35 , pp. 311-317
    • Bärlund, M.1    Monni, O.2    Weaver, J.D.3    Kauraniemi, P.4    Sauter, G.5    Heiskanen, M.6    Kallioniemi, O.P.7    Kallioniemi, A.8
  • 11
    • 0035167343 scopus 로고    scopus 로고
    • Ductal epithelial proliferations of the breast: A biological continuum? Comparative genomic hybridization and high-molecular- weight cytokeratin expression patterns
    • doi:10.1002/path.982
    • Boecker, W., Buerger, H., Schmitz, K., Ellis, I.A., van Diest, P.J., Sinn, H.P., et al. 2001. Ductal epithelial proliferations of the breast: a biological continuum? Comparative genomic hybridization and high-molecular- weight cytokeratin expression patterns. J. Pathol. 195: 415-421. doi:10.1002/path.982.
    • (2001) J. Pathol , vol.195 , pp. 415-421
    • Boecker, W.1    Buerger, H.2    Schmitz, K.3    Ellis, I.A.4    van Diest, P.J.5    Sinn, H.P.6
  • 12
    • 33645894496 scopus 로고    scopus 로고
    • Detection of gene copy number changes in CGH microarrays using a spatially correlated mixture model
    • doi:10.1093/bioinformatics/bt1035
    • Broet, P., and Richardson, S. 2006. Detection of gene copy number changes in CGH microarrays using a spatially correlated mixture model. Bioinformatics, 22: 911-918. doi:10.1093/bioinformatics/bt1035.
    • (2006) Bioinformatics , vol.22 , pp. 911-918
    • Broet, P.1    Richardson, S.2
  • 13
    • 0032980789 scopus 로고    scopus 로고
    • Buerger, H., Otterbach, F., Simon, R., Poremba, C., Diallo, R., Decker, T., et al. 1999. Comparative genomic hybridization of ductal carcinoma in situ of the breast-evidence of multiple genetic pathways. J. Pathol. 187: 396-402. doi:10.1002/(SICI) 1096-9896(199903)187:4〈396::AID-PATH286〉3. 0.CO;2-L.
    • Buerger, H., Otterbach, F., Simon, R., Poremba, C., Diallo, R., Decker, T., et al. 1999. Comparative genomic hybridization of ductal carcinoma in situ of the breast-evidence of multiple genetic pathways. J. Pathol. 187: 396-402. doi:10.1002/(SICI) 1096-9896(199903)187:4〈396::AID-PATH286〉3. 0.CO;2-L.
  • 14
    • 0034990662 scopus 로고    scopus 로고
    • Ductal invasive G2 and G3 carcinomas of the breast are the end stages of at least two different lines of genetic evolution
    • doi:10.1002/path.875
    • Buerger, H., Mommers, E.C., Littmann, R., Simon, R., Diallo, R., Poremba, C., et al. 2001. Ductal invasive G2 and G3 carcinomas of the breast are the end stages of at least two different lines of genetic evolution. J. Pathol. 194: 165-170. doi:10.1002/path.875.
    • (2001) J. Pathol , vol.194 , pp. 165-170
    • Buerger, H.1    Mommers, E.C.2    Littmann, R.3    Simon, R.4    Diallo, R.5    Poremba, C.6
  • 16
    • 13844281018 scopus 로고    scopus 로고
    • Identification and validation of prognostic markers in breast cancer with the complementary use of array-CGH and tissue microarrays
    • doi:10.1002/path.1694
    • Callagy, G., Pharoah, P., Chin, S.F., Sangan, T., Daigo, Y., Jackson, L., and Caldas, C 2005. Identification and validation of prognostic markers in breast cancer with the complementary use of array-CGH and tissue microarrays. J. Pathol. 205: 388-396. doi:10.1002/path.1694.
    • (2005) J. Pathol , vol.205 , pp. 388-396
    • Callagy, G.1    Pharoah, P.2    Chin, S.F.3    Sangan, T.4    Daigo, Y.5    Jackson, L.6    Caldas, C.7
  • 17
    • 33748286796 scopus 로고    scopus 로고
    • A signature of chromosomal instability inferred from gene expression profiles predicts clinical outcome in multiple human cancers
    • doi:10.1038/ng1861
    • Carter, S.L., Eklund, A.C., Kohane, i.S., Harris, L.N., and Szallasi, Z. 2006. A signature of chromosomal instability inferred from gene expression profiles predicts clinical outcome in multiple human cancers. Nat. Genet. 38: 1043-1048. doi:10.1038/ng1861.
    • (2006) Nat. Genet , vol.38 , pp. 1043-1048
    • Carter, S.L.1    Eklund, A.C.2    Kohane, I.S.3    Harris, L.N.4    Szallasi, Z.5
  • 18
    • 0042125511 scopus 로고    scopus 로고
    • Gene expression profiling for the prediction of therapeutic response todocetaxel in patients with breast cancer
    • doi:10.1016/S0140-6736(03)14023-8
    • Chang, J.C., Wooten, E.C., Tsimelzon, A., Hilsenbeck, S.G., Gutierrez, M.C., Elledg, R., et al. 2003. Gene expression profiling for the prediction of therapeutic response todocetaxel in patients with breast cancer. Lancet, 362: 362-369. doi:10.1016/S0140-6736(03)14023-8.
    • (2003) Lancet , vol.362 , pp. 362-369
    • Chang, J.C.1    Wooten, E.C.2    Tsimelzon, A.3    Hilsenbeck, S.G.4    Gutierrez, M.C.5    Elledg, R.6
  • 20
    • 9144271680 scopus 로고    scopus 로고
    • The RAB25 small GTPase determines aggressiveness of ovarian and breast cancers
    • doi:10.1038/nm1125
    • Cheng, K.W., Lahad, J.P., Kuo, W.L., Lapuk, A., Yamada, K., Auersperg, N., et al. 2004. The RAB25 small GTPase determines aggressiveness of ovarian and breast cancers. Nat. Med. 10: 1251-1256. doi:10.1038/nm1125.
    • (2004) Nat. Med , vol.10 , pp. 1251-1256
    • Cheng, K.W.1    Lahad, J.P.2    Kuo, W.L.3    Lapuk, A.4    Yamada, K.5    Auersperg, N.6
  • 21
    • 33845191779 scopus 로고    scopus 로고
    • Genomic and transcriptional aberrations linked to breast cancer pathophysiologies
    • doi:10.1016/j.ccr. 2006.10.009
    • Chin, K., DeVries, S., Fridlyand, J., Spellman, P.T., Roydasgupta, R., Kuo, W.L., et al. 2006. Genomic and transcriptional aberrations linked to breast cancer pathophysiologies. Cancer Cell, 10: 529-541. doi:10.1016/j.ccr. 2006.10.009.
    • (2006) Cancer Cell , vol.10 , pp. 529-541
    • Chin, K.1    DeVries, S.2    Fridlyand, J.3    Spellman, P.T.4    Roydasgupta, R.5    Kuo, W.L.6
  • 22
    • 0041662219 scopus 로고    scopus 로고
    • DNA copy number changes detected by comparative genomic hybridization and their association with clinicopathologic parameters in breast tumors
    • doi:10.1016/S0165-4608(03) 00094-3
    • Cingoz, S., Altungoz, O., Canda, T., Saydam, S., Aksakoglu, G., and Sakizli, M. 2003. DNA copy number changes detected by comparative genomic hybridization and their association with clinicopathologic parameters in breast tumors. Cancer Genet. Cytogenet. 145: 108-114. doi:10.1016/S0165-4608(03) 00094-3.
    • (2003) Cancer Genet. Cytogenet , vol.145 , pp. 108-114
    • Cingoz, S.1    Altungoz, O.2    Canda, T.3    Saydam, S.4    Aksakoglu, G.5    Sakizli, M.6
  • 23
    • 84901908638 scopus 로고    scopus 로고
    • Breast cancer incidence and mortality trends in an affluent population: Marin County, California, U.S.A., 1990-1999
    • doi:10.1186/bcr458
    • Clarke, C.A., Glaser, S.L., West, D.W., Ereman, R.R., Erdmann, C.A., Barlow, J.M., and Wrensch, M.R. 2002. Breast cancer incidence and mortality trends in an affluent population: Marin County, California, U.S.A., 1990-1999. Breast Cancer Res. 4: R13. doi:10.1186/bcr458.
    • (2002) Breast Cancer Res , vol.4
    • Clarke, C.A.1    Glaser, S.L.2    West, D.W.3    Ereman, R.R.4    Erdmann, C.A.5    Barlow, J.M.6    Wrensch, M.R.7
  • 24
    • 0036146659 scopus 로고    scopus 로고
    • E-cadherin and loss of heterozygosity at chromosome 16 in breast carcinogenesis: Different genetic pathways in ductal and lobular breast cancer?
    • doi:10.1186/bcr416
    • Cleton-Jansen, A.M. 2002. E-cadherin and loss of heterozygosity at chromosome 16 in breast carcinogenesis: different genetic pathways in ductal and lobular breast cancer? Breast Cancer Res. 4: 5-8. doi:10.1186/bcr416.
    • (2002) Breast Cancer Res , vol.4 , pp. 5-8
    • Cleton-Jansen, A.M.1
  • 27
    • 33846678737 scopus 로고    scopus 로고
    • Deletion of chromosome Hq predicts response to anthracycline-based chemotherapy in early breast cancer
    • doi:10.1158/0008-5472.CAN-06-3307
    • Climent, J., Dimitrow, P., Fridlyand, J., Palacios, J., Siebert, R., Albertson, D.G., et al. 2007. Deletion of chromosome Hq predicts response to anthracycline-based chemotherapy in early breast cancer. Cancer Res. 67: 818-826. doi:10.1158/0008-5472.CAN-06-3307.
    • (2007) Cancer Res , vol.67 , pp. 818-826
    • Climent, J.1    Dimitrow, P.2    Fridlyand, J.3    Palacios, J.4    Siebert, R.5    Albertson, D.G.6
  • 28
    • 27744487376 scopus 로고    scopus 로고
    • Molecular characterization of the t(3;9) associated with immortalization in the MCF10A cell line
    • doi:10.1016/j.cancergencyto.2005.04.019
    • Cowell, J.K., LaDuca, J., Rossi, M.R., Burkhardt, T., Nowak, N.J., and Matsui, S. 2005. Molecular characterization of the t(3;9) associated with immortalization in the MCF10A cell line. Cancer Genet. Cytogenet. 163: 23-29. doi:10.1016/j.cancergencyto.2005.04.019.
    • (2005) Cancer Genet. Cytogenet , vol.163 , pp. 23-29
    • Cowell, J.K.1    LaDuca, J.2    Rossi, M.R.3    Burkhardt, T.4    Nowak, N.J.5    Matsui, S.6
  • 30
  • 31
    • 0032770741 scopus 로고    scopus 로고
    • Eosinophilic and granular cell tumors of the breast
    • Damiani, S., Dina, R., and Eusebi, V. 1999. Eosinophilic and granular cell tumors of the breast. Semin. Diagn. Pathol. 16: 117-125.
    • (1999) Semin. Diagn. Pathol , vol.16 , pp. 117-125
    • Damiani, S.1    Dina, R.2    Eusebi, V.3
  • 32
    • 9244233813 scopus 로고    scopus 로고
    • A versatile statistical analysis algorithm to detect genome copy number variation
    • doi:10.1073/pnas.0407247101
    • Darawala, R.S., Rudra, A., Ostrer, H., Lucito, R., Wigler, M., and Mishra, B. 2004. A versatile statistical analysis algorithm to detect genome copy number variation. Proc. Natl. Acad. Sci. U.S.A. 101: 16292-16297. doi:10.1073/pnas.0407247101.
    • (2004) Proc. Natl. Acad. Sci. U.S.A , vol.101 , pp. 16292-16297
    • Darawala, R.S.1    Rudra, A.2    Ostrer, H.3    Lucito, R.4    Wigler, M.5    Mishra, B.6
  • 33
    • 17644397384 scopus 로고    scopus 로고
    • Exon array CGH: Detection of copy-number changes at the resolution of individual exons in the human genome
    • doi:10.1086/429588
    • Dhami, P., Coffey, A.J., Abbs, S., Vermeesch, J.R., Dumanski, J.P., Woodward, K.J., et al. 2005. Exon array CGH: detection of copy-number changes at the resolution of individual exons in the human genome. Am. J. Hum. Genet. 76: 750-762. doi:10.1086/429588.
    • (2005) Am. J. Hum. Genet , vol.76 , pp. 750-762
    • Dhami, P.1    Coffey, A.J.2    Abbs, S.3    Vermeesch, J.R.4    Dumanski, J.P.5    Woodward, K.J.6
  • 34
    • 0036097016 scopus 로고    scopus 로고
    • DNA sequence losses on chromosomes 11p and 18q are associated with clinical outcome in lymph node-negative ductal breast cancer
    • Delias, A., Torhorst, J., Schultheiss, E., Mihatsch, M.J., and Moch, H. 2002. DNA sequence losses on chromosomes 11p and 18q are associated with clinical outcome in lymph node-negative ductal breast cancer. Clin. Cancer Res. 8: 1210-1216.
    • (2002) Clin. Cancer Res , vol.8 , pp. 1210-1216
    • Delias, A.1    Torhorst, J.2    Schultheiss, E.3    Mihatsch, M.J.4    Moch, H.5
  • 35
    • 9144229497 scopus 로고    scopus 로고
    • Secretory carcinoma of the breast: A distinct variant of invasive ductal carcinoma assessed by comparative genomic hybridization and immunohistochemistry
    • doi:10.1016/S0046- 8177(03)00423-4
    • Diallo, R., Schaefer, K.L., Bankfalvi, A., Decker, T., Ruhnke, M., Wulfing, P., et al. 2003. Secretory carcinoma of the breast: a distinct variant of invasive ductal carcinoma assessed by comparative genomic hybridization and immunohistochemistry. Hum. Pathol. 34: 1299-1305. doi:10.1016/S0046- 8177(03)00423-4.
    • (2003) Hum. Pathol , vol.34 , pp. 1299-1305
    • Diallo, R.1    Schaefer, K.L.2    Bankfalvi, A.3    Decker, T.4    Ruhnke, M.5    Wulfing, P.6
  • 36
    • 0035342577 scopus 로고    scopus 로고
    • Multiple ways of silencing E-cadherin gene expression in lobular carcinoma of the breast
    • doi:10.1002/ijc.1208
    • Droufakou, S., Deshmane, V., Roylance, R., Hanby, A., Tomlinson, I., and Hart, I.R. 2001. Multiple ways of silencing E-cadherin gene expression in lobular carcinoma of the breast. Int. J. Cancer, 92: 404-408. doi:10.1002/ijc.1208.
    • (2001) Int. J. Cancer , vol.92 , pp. 404-408
    • Droufakou, S.1    Deshmane, V.2    Roylance, R.3    Hanby, A.4    Tomlinson, I.5    Hart, I.R.6
  • 37
    • 16344367718 scopus 로고    scopus 로고
    • Quantile smoothing of array CGH data
    • Eilers, P.H., and de Menezes, R.X. 2005. Quantile smoothing of array CGH data. Bioinformatics, 21: 1146-1153.
    • (2005) Bioinformatics , vol.21 , pp. 1146-1153
    • Eilers, P.H.1    de Menezes, R.X.2
  • 38
    • 0034089182 scopus 로고    scopus 로고
    • Engelen, J.J., Moog, U., Evers, J.L., Dassen, H., Albrechts, J.C., and Hamers, A.J. 2000. Duplication of chromosome region 8p23.1→p23.3: a benign variant? Am. J. Med. Genet. 91: 18-21. doi:10.1002/(SICI)1096- 8628(20000306)91:1〈18::AID-AJMG3〉3.0.CO;2-3.
    • Engelen, J.J., Moog, U., Evers, J.L., Dassen, H., Albrechts, J.C., and Hamers, A.J. 2000. Duplication of chromosome region 8p23.1→p23.3: a benign variant? Am. J. Med. Genet. 91: 18-21. doi:10.1002/(SICI)1096- 8628(20000306)91:1〈18::AID-AJMG3〉3.0.CO;2-3.
  • 39
    • 0042093747 scopus 로고    scopus 로고
    • Identification of Stk6/STK15 as a candidate low-penetrance tumor-susceptibility gene in mouse and human
    • doi:10.1038/ng1220
    • Ewart-Toland, A., Briassouli, P., de Koning, J.P., Mao, J.H., Yuan, J., Chan, F., et al. 2003. Identification of Stk6/STK15 as a candidate low-penetrance tumor-susceptibility gene in mouse and human. Nat. Genet. 34: 403-12. doi:10.1038/ng1220.
    • (2003) Nat. Genet , vol.34 , pp. 403-412
    • Ewart-Toland, A.1    Briassouli, P.2    de Koning, J.P.3    Mao, J.H.4    Yuan, J.5    Chan, F.6
  • 40
    • 12144285594 scopus 로고    scopus 로고
    • Assessing the impact of population stratification on genetic association studies
    • doi:10.1038/ng1333
    • Freedman, M.L., Reich, D., Penney, K.L., McDonald, G.J., Mignault, A.A., Patterson, N., et al. 2004. Assessing the impact of population stratification on genetic association studies. Nat. Genet. 36: 388-393. doi:10.1038/ng1333.
    • (2004) Nat. Genet , vol.36 , pp. 388-393
    • Freedman, M.L.1    Reich, D.2    Penney, K.L.3    McDonald, G.J.4    Mignault, A.A.5    Patterson, N.6
  • 41
    • 9244229940 scopus 로고    scopus 로고
    • Application of Hidden Markov models to the analysis of the array CGH data
    • doi:10.1016/j.jmva.2004.02.008
    • Fridlyand, J., Snijders, A., Pinkel, D., Albertson, D.G., and Jain, A. 2004. Application of Hidden Markov models to the analysis of the array CGH data. J. Multivariate Anal. 90: 132-153. doi:10.1016/j.jmva.2004.02.008.
    • (2004) J. Multivariate Anal , vol.90 , pp. 132-153
    • Fridlyand, J.1    Snijders, A.2    Pinkel, D.3    Albertson, D.G.4    Jain, A.5
  • 42
    • 33646559516 scopus 로고    scopus 로고
    • Breast tumor copy number aberration phenotypes and genomic instability
    • doi:10.1186/1471-2407-6-96
    • Fridlyand, J., Snijders, A.M., Ylstra, B., Li, H., Olshen, A., Segraves, R., et al. 2006. Breast tumor copy number aberration phenotypes and genomic instability. BMC Cancer, 6: 96. . doi:10.1186/1471-2407-6-96.
    • (2006) BMC Cancer , vol.6 , pp. 96
    • Fridlyand, J.1    Snijders, A.M.2    Ylstra, B.3    Li, H.4    Olshen, A.5    Segraves, R.6
  • 43
    • 0035139691 scopus 로고    scopus 로고
    • Genetic imbalances in pT2 breast cancers of southern Chinese women
    • doi:10.1016/S0165-4608(00)00328-9
    • Fung, L.F., Wong, N., Tang, N., Lau, A., Wong, V., Pang, C.P., et al. 2001. Genetic imbalances in pT2 breast cancers of southern Chinese women. Cancer Genet. Cytogenet. 124: 56-61. doi:10.1016/S0165-4608(00)00328-9.
    • (2001) Cancer Genet. Cytogenet , vol.124 , pp. 56-61
    • Fung, L.F.1    Wong, N.2    Tang, N.3    Lau, A.4    Wong, V.5    Pang, C.P.6
  • 44
    • 23444453060 scopus 로고    scopus 로고
    • A 1 Mb minimal amplicon at 8p11-12 in breast cancer identifies new candidate oncogenes
    • doi:10.1038/sj.onc.1208741
    • Garcia, M.J., Pole, J.C., Chin, S.F., Teschendorff, A., Naderi, A., Ozdag, H., et al. 2005. A 1 Mb minimal amplicon at 8p11-12 in breast cancer identifies new candidate oncogenes. Oncogene, 24: 5235-5245. doi:10.1038/sj.onc.1208741.
    • (2005) Oncogene , vol.24 , pp. 5235-5245
    • Garcia, M.J.1    Pole, J.C.2    Chin, S.F.3    Teschendorff, A.4    Naderi, A.5    Ozdag, H.6
  • 45
    • 0028143018 scopus 로고
    • Systematic population-based assessment of cancer risk in first-degree relatives of cancer probands
    • doi:10.1093/jnci/86.21.1600
    • Goldgar, D.E., Easton, D.F., Cannon-Albright, L.A., and Skolnick, M.H. 1994. Systematic population-based assessment of cancer risk in first-degree relatives of cancer probands. J. Natl. Cancer Inst. 86: 1600-1608. doi:10.1093/jnci/86.21.1600.
    • (1994) J. Natl. Cancer Inst , vol.86 , pp. 1600-1608
    • Goldgar, D.E.1    Easton, D.F.2    Cannon-Albright, L.A.3    Skolnick, M.H.4
  • 46
    • 0035159644 scopus 로고    scopus 로고
    • Günther, K., Merkelbach-Brase, S., Amo-Takyi, B.K., Handt, S., Schroder, W., and Tietze, L. 2001. Differences in genetic alterations between primary lobular and ductal breast cancers detected by comparative genomic hybridization. J. Pathol. 193: 40-47. doi:10.1002/1096-9896(2000)9999: 9999〈::AID-PATH745〉3.0. CO;2-N.
    • Günther, K., Merkelbach-Brase, S., Amo-Takyi, B.K., Handt, S., Schroder, W., and Tietze, L. 2001. Differences in genetic alterations between primary lobular and ductal breast cancers detected by comparative genomic hybridization. J. Pathol. 193: 40-47. doi:10.1002/1096-9896(2000)9999: 9999〈::AID-PATH745〉3.0. CO;2-N.
  • 47
    • 0034614637 scopus 로고    scopus 로고
    • The hallmarks of cancer
    • doi:10.1016/S0092-8674(00)81683-9
    • Hanahan, D., and Weinberg, R.A. 2000. The hallmarks of cancer. Cell, 100: 57-70. doi:10.1016/S0092-8674(00)81683-9.
    • (2000) Cell , vol.100 , pp. 57-70
    • Hanahan, D.1    Weinberg, R.A.2
  • 48
    • 14944343419 scopus 로고    scopus 로고
    • Microarray analyses reveal strong influence of DNA copy number alterations on the transcriptional patterns in pancreatic cancer: Implications for the interpretation of genomic amplifications
    • doi:10.1038/sj.onc.1208383
    • Heidenblad, M., Lindgren, D., Veltman, J.A., Jonson, T., Mahlamaki, E.H., Gorunova, L., et al. 2005. Microarray analyses reveal strong influence of DNA copy number alterations on the transcriptional patterns in pancreatic cancer: implications for the interpretation of genomic amplifications. Oncogene, 24: 1794-1801. doi:10.1038/sj.onc.1208383.
    • (2005) Oncogene , vol.24 , pp. 1794-1801
    • Heidenblad, M.1    Lindgren, D.2    Veltman, J.A.3    Jonson, T.4    Mahlamaki, E.H.5    Gorunova, L.6
  • 49
    • 0032415839 scopus 로고    scopus 로고
    • Hermsen, M.A., Baak, J.P., Meijer, G.A., Weiss, J.M., Walboomers, J.W., Snijders, P.J., and van Diest, P.J. 1998. Genetic analysis of 53 lymph node-negative breast carcinomas by CGH and relation to clinical, pathological, morphometric, and DNA cytometric prognostic factors. J. Pathol. 186: 356-362. doi:10.1002/(SICI)1096-9896(199812)186:4〈356::AID-PATH196〉3. 0.CO;2-Z.
    • Hermsen, M.A., Baak, J.P., Meijer, G.A., Weiss, J.M., Walboomers, J.W., Snijders, P.J., and van Diest, P.J. 1998. Genetic analysis of 53 lymph node-negative breast carcinomas by CGH and relation to clinical, pathological, morphometric, and DNA cytometric prognostic factors. J. Pathol. 186: 356-362. doi:10.1002/(SICI)1096-9896(199812)186:4〈356::AID-PATH196〉3. 0.CO;2-Z.
  • 50
    • 18744369011 scopus 로고    scopus 로고
    • Karyotypic aberrations of chromosomes 16 and 17 are related to survival in patients with breast cancer
    • doi:10.1046/j.1365-2168.2002.02270.x
    • Hislop, R.G., Pratt, N., Stocks, S.C., Steel, C.M., Sales, M., Goudie, D., Robertson, A., and Thompson, A.M. 2002. Karyotypic aberrations of chromosomes 16 and 17 are related to survival in patients with breast cancer. Br. J. Surg. 89: 1581-1586. doi:10.1046/j.1365-2168.2002.02270.x.
    • (2002) Br. J. Surg , vol.89 , pp. 1581-1586
    • Hislop, R.G.1    Pratt, N.2    Stocks, S.C.3    Steel, C.M.4    Sales, M.5    Goudie, D.6    Robertson, A.7    Thompson, A.M.8
  • 51
    • 27544504676 scopus 로고    scopus 로고
    • Detection of DNA copy number alterations using penalized least squares regression
    • doi:10.1093/bioinformatics/bti646
    • Huang, T., Wu, B., Lizardi, P., and Zhao, H. 2005. Detection of DNA copy number alterations using penalized least squares regression. Bioinformatics, 21: 3811-3817. doi:10.1093/bioinformatics/bti646.
    • (2005) Bioinformatics , vol.21 , pp. 3811-3817
    • Huang, T.1    Wu, B.2    Lizardi, P.3    Zhao, H.4
  • 52
    • 12344259648 scopus 로고    scopus 로고
    • Analysis of array CGH data: From signal ratio to gain and loss of DNA regions
    • doi:10.1093/bioinformatics/ bth418
    • Hupe, P., Stransky, N., Thiery, J.P., Radvanyi, F., and Barillot, E. 2004. Analysis of array CGH data: from signal ratio to gain and loss of DNA regions. Bioinformatics, 20: 3413-3422. doi:10.1093/bioinformatics/ bth418.
    • (2004) Bioinformatics , vol.20 , pp. 3413-3422
    • Hupe, P.1    Stransky, N.2    Thiery, J.P.3    Radvanyi, F.4    Barillot, E.5
  • 53
    • 0036829790 scopus 로고    scopus 로고
    • Impact of DNA amplification on gene expression patterns in breast cancer
    • Hyman, E., Kauraniemi, P., Hautaniemi, S., Wolf, M., Mousses, S., Rozenblum, E., et al. 2002. Impact of DNA amplification on gene expression patterns in breast cancer. Cancer Res. 62: 6240-6245.
    • (2002) Cancer Res , vol.62 , pp. 6240-6245
    • Hyman, E.1    Kauraniemi, P.2    Hautaniemi, S.3    Wolf, M.4    Mousses, S.5    Rozenblum, E.6
  • 56
    • 0028874583 scopus 로고
    • Genetic aberrations detected by comparative genomic hybridization predict outcome in node-negative breast cancer
    • Isola, J.J., Kallioniemi, O.P., Chu, L.W., Fuqua, S.A., Hilsenbeck, S.G., Osborne, C.K., and Waldman, F.M. 1995. Genetic aberrations detected by comparative genomic hybridization predict outcome in node-negative breast cancer. Am. J. Pathol. 147: 905-911.
    • (1995) Am. J. Pathol , vol.147 , pp. 905-911
    • Isola, J.J.1    Kallioniemi, O.P.2    Chu, L.W.3    Fuqua, S.A.4    Hilsenbeck, S.G.5    Osborne, C.K.6    Waldman, F.M.7
  • 57
    • 1342269684 scopus 로고    scopus 로고
    • In lymph node-negative invasive breast carcinomas, specific chromosomal aberrations are strongly associated, with high mitotic activity and predict outcome more accurately than grade, tumour diameter, and oestrogen receptor
    • doi:10.1002/path.1475
    • Janssen, E.A., Baak, J.P., Guervos, M.A., van Diest, P.J., Jiwa, M., and Hermsen, M.A. 2003. In lymph node-negative invasive breast carcinomas, specific chromosomal aberrations are strongly associated, with high mitotic activity and predict outcome more accurately than grade, tumour diameter, and oestrogen receptor. J. Pathol. 201: 555-561. doi:10.1002/path.1475.
    • (2003) J. Pathol , vol.201 , pp. 555-561
    • Janssen, E.A.1    Baak, J.P.2    Guervos, M.A.3    van Diest, P.J.4    Jiwa, M.5    Hermsen, M.A.6
  • 59
    • 4644231521 scopus 로고    scopus 로고
    • Molecular cytogenetic identification of subgroups of grade III invasive ductal breast carcinomas with different clinical outcomes
    • doi:10.1158/1078-0432.CCR-03-0731
    • Jones, C., Ford, E., Gillett, C., Ryder, K., Merrett, S., Reis-Filho, J.S., et al. 2004. Molecular cytogenetic identification of subgroups of grade III invasive ductal breast carcinomas with different clinical outcomes. Clin. Cancer Res. 10: 5988-5997. doi:10.1158/1078-0432.CCR-03-0731.
    • (2004) Clin. Cancer Res , vol.10 , pp. 5988-5997
    • Jones, C.1    Ford, E.2    Gillett, C.3    Ryder, K.4    Merrett, S.5    Reis-Filho, J.S.6
  • 60
    • 9444223586 scopus 로고    scopus 로고
    • Breakpoint identification and smoothing of array comparative genomic hybridization data
    • doi:10.1093/ bioinformatics/bth355
    • Jong, K., Marchiori, E., Meijer, G., Vaart, A.V., and Ylstra, B. 2004. Breakpoint identification and smoothing of array comparative genomic hybridization data. Bioinformatics, 20: 3636-3637. doi:10.1093/ bioinformatics/bth355.
    • (2004) Bioinformatics , vol.20 , pp. 3636-3637
    • Jong, K.1    Marchiori, E.2    Meijer, G.3    Vaart, A.V.4    Ylstra, B.5
  • 61
    • 24744468647 scopus 로고    scopus 로고
    • Distinct genomic profiles in hereditary breast tumors identified by array-based comparative genomic hybridization
    • Jonsson, G., Naylor, T.L., Vallon-Christersson, J., Staaf, J., Huang, J., Ward, M.R., et al. 2005. Distinct genomic profiles in hereditary breast tumors identified by array-based comparative genomic hybridization. Cancer Res. 65: 7612-7621.
    • (2005) Cancer Res , vol.65 , pp. 7612-7621
    • Jonsson, G.1    Naylor, T.L.2    Vallon-Christersson, J.3    Staaf, J.4    Huang, J.5    Ward, M.R.6
  • 62
    • 0026495364 scopus 로고
    • Comparative genomic hybridization for molecular cytogenetic analysis of solid tumors
    • doi:10.1126/science.1359641
    • Kallioniemi, A., Kallioniemi, O.P., Sudar, D., Rutovitz, D., Gray, J.W., Waldman, F., and Pinkel, D. 1992. Comparative genomic hybridization for molecular cytogenetic analysis of solid tumors. Science, 258: 818-821. doi:10.1126/science.1359641.
    • (1992) Science , vol.258 , pp. 818-821
    • Kallioniemi, A.1    Kallioniemi, O.P.2    Sudar, D.3    Rutovitz, D.4    Gray, J.W.5    Waldman, F.6    Pinkel, D.7
  • 63
    • 0027966172 scopus 로고
    • Optimizing comparative genomic hybridization for analysis of DNA sequence copy number changes in solid tumors
    • doi:10.1002/gcc.2870100403
    • Kallioniemi, O.P., Kallioniemi, A., Piper, J., Isola, J., Waldman, F.M., Gray, J.W., and Pinkel, D. 1994. Optimizing comparative genomic hybridization for analysis of DNA sequence copy number changes in solid tumors. Genes Chromosomes Cancer, 10: 231-243. doi:10.1002/gcc.2870100403.
    • (1994) Genes Chromosomes Cancer , vol.10 , pp. 231-243
    • Kallioniemi, O.P.1    Kallioniemi, A.2    Piper, J.3    Isola, J.4    Waldman, F.M.5    Gray, J.W.6    Pinkel, D.7
  • 64
    • 28344444255 scopus 로고    scopus 로고
    • A stepwise framework for the normalization of array CGH data
    • doi:10.1186/1471-2105-6-274
    • Khojasteh, M., Lam, W.L., Ward, R.K., and MacAulay, C. 2005. A stepwise framework for the normalization of array CGH data. BMC Bioinformatics, 6: 274. doi:10.1186/1471-2105-6-274.
    • (2005) BMC Bioinformatics , vol.6 , pp. 274
    • Khojasteh, M.1    Lam, W.L.2    Ward, R.K.3    MacAulay, C.4
  • 65
    • 0032032471 scopus 로고    scopus 로고
    • Kirchhoff, M., Gerdes, T., Rose, H., Maahr, J., Ottesen, A.M., and Lundsteen, C. 1998. Detection of chromosomal gains and losses in comparative genomic hybridization analysis based on standard reference intervals. Cytometry, 31: 163-173. doi:10.1002/(SICI)1097-0320(19980301)31:3〈163::AID- CYTO3〉3.0.CO;2-M.
    • Kirchhoff, M., Gerdes, T., Rose, H., Maahr, J., Ottesen, A.M., and Lundsteen, C. 1998. Detection of chromosomal gains and losses in comparative genomic hybridization analysis based on standard reference intervals. Cytometry, 31: 163-173. doi:10.1002/(SICI)1097-0320(19980301)31:3〈163::AID- CYTO3〉3.0.CO;2-M.
  • 66
    • 0032792821 scopus 로고    scopus 로고
    • Kirchhoff, M., Gerdes, T., Maahr, J., Rose, H., Bentz, M., Dahner, H., and Lundsteen, C. 1999. Deletions below 10 megabasepairs are detected in comparative genomic hybridization by standard reference intervals. Genes Chromosomes Cancer, 25: 410-413. doi:10.1002/(SICI)1098-2264(199908)25: 4〈410::AID-GCC17〉3.0.CO;2-J.
    • Kirchhoff, M., Gerdes, T., Maahr, J., Rose, H., Bentz, M., Dahner, H., and Lundsteen, C. 1999. Deletions below 10 megabasepairs are detected in comparative genomic hybridization by standard reference intervals. Genes Chromosomes Cancer, 25: 410-413. doi:10.1002/(SICI)1098-2264(199908)25: 4〈410::AID-GCC17〉3.0.CO;2-J.
  • 67
    • 23044466543 scopus 로고    scopus 로고
    • The interactive online SKY/M-FISH & CGH database and the Entrez cancer chromosomes search database: Linkage of chromosomal aberrations with the genome sequence
    • doi:10.1002/gcc.20224
    • Knutsen, T., Gobu, V., Knaus, R., Padilla-Nash, H., Augustus, M., Strausberg, R.L., et al. 2005. The interactive online SKY/M-FISH & CGH database and the Entrez cancer chromosomes search database: linkage of chromosomal aberrations with the genome sequence. Genes Chromosomes Cancer, 44: 52-64. doi:10.1002/gcc.20224.
    • (2005) Genes Chromosomes Cancer , vol.44 , pp. 52-64
    • Knutsen, T.1    Gobu, V.2    Knaus, R.3    Padilla-Nash, H.4    Augustus, M.5    Strausberg, R.L.6
  • 68
    • 0036849017 scopus 로고    scopus 로고
    • Cytogenetic alterations and cytokeratin expression patterns in breast cancer: Integrating a new model of breast differentiation into cytogenetic pathways of breast carcinogenesis
    • Korsching, E., Packeisen, J., Agelopoulos, K., Eisenacher, M., Voss, R., Isola, J., et al. 2002. Cytogenetic alterations and cytokeratin expression patterns in breast cancer: integrating a new model of breast differentiation into cytogenetic pathways of breast carcinogenesis. Lab. Invest. 82: 1525-1533.
    • (2002) Lab. Invest , vol.82 , pp. 1525-1533
    • Korsching, E.1    Packeisen, J.2    Agelopoulos, K.3    Eisenacher, M.4    Voss, R.5    Isola, J.6
  • 69
    • 2342656419 scopus 로고    scopus 로고
    • Deciphering a subgroup of breast carcinomas with putative progression of grade during carcinogenesis revealed by comparative genomic hybridisation (CGH) and immunohistochemistry
    • doi:10.1038/sj.bjc.6601658
    • Korsching, E., Packeisen, J., Helms, M.W., Kersting, C., Voss, R., van Diest, P.J., et al. 2004. Deciphering a subgroup of breast carcinomas with putative progression of grade during carcinogenesis revealed by comparative genomic hybridisation (CGH) and immunohistochemistry. Br. J. Cancer, 90: 1422-1428. doi:10.1038/sj.bjc.6601658.
    • (2004) Br. J. Cancer , vol.90 , pp. 1422-1428
    • Korsching, E.1    Packeisen, J.2    Helms, M.W.3    Kersting, C.4    Voss, R.5    van Diest, P.J.6
  • 70
    • 0037431773 scopus 로고    scopus 로고
    • In-situ lobular neoplasia: Time for an awakening
    • doi:10.1016/S0140-6736(03)12240-4
    • Lakhani, S.R. 2003. In-situ lobular neoplasia: time for an awakening. Lancet, 361: 96. doi:10.1016/S0140-6736(03)12240-4.
    • (2003) Lancet , vol.361 , pp. 96
    • Lakhani, S.R.1
  • 71
    • 0030042575 scopus 로고    scopus 로고
    • Detection of allelic imbalance indicates that a proportion of mammary hyperplasia of usual type are clonal, neoplastic proliferations
    • Lakhani, S.R., Slack, D.N., Hamoudi, R.A., Collins, N., Stratton, M.R., and Sloane, J.P. 1996. Detection of allelic imbalance indicates that a proportion of mammary hyperplasia of usual type are clonal, neoplastic proliferations. Lab. Invest. 74: 129-135.
    • (1996) Lab. Invest , vol.74 , pp. 129-135
    • Lakhani, S.R.1    Slack, D.N.2    Hamoudi, R.A.3    Collins, N.4    Stratton, M.R.5    Sloane, J.P.6
  • 72
    • 33748673977 scopus 로고    scopus 로고
    • VAMP: Visualization and analysis of array-CGH, transcriptome and other molecularprofiles
    • doi:10.1093/ bioinformatics/bt1359
    • La Rosa, P., Viara, E., Hupe, P., Pierron, G., Liva, S., Neuvial, P., et al. 2006. VAMP: visualization and analysis of array-CGH, transcriptome and other molecularprofiles. Bioinformatics, 22: 2066-2073. doi:10.1093/ bioinformatics/bt1359.
    • (2006) Bioinformatics , vol.22 , pp. 2066-2073
    • La Rosa, P.1    Viara, E.2    Hupe, P.3    Pierron, G.4    Liva, S.5    Neuvial, P.6
  • 73
    • 0033808727 scopus 로고    scopus 로고
    • An epistatic interaction controls the latency of a transgene-induced mammary tumor
    • doi:10.1007/s003350010163
    • Le Voyer, T., Lu, Z., Babb, J., Lifsted, T., Williams, M., and Hunter, K. 2000. An epistatic interaction controls the latency of a transgene-induced mammary tumor. Mamm. Genome, 11: 883-889. doi:10.1007/s003350010163.
    • (2000) Mamm. Genome , vol.11 , pp. 883-889
    • Le Voyer, T.1    Lu, Z.2    Babb, J.3    Lifsted, T.4    Williams, M.5    Hunter, K.6
  • 74
    • 0034331289 scopus 로고    scopus 로고
    • A frequent deletion polymorphism on chromosome 22q13 identified by representational difference analysis of ovarian cancer
    • doi:10.1006/geno.2000. 6357
    • Lin, H., Pizer, E.S., and Morin, P.J. 2000. A frequent deletion polymorphism on chromosome 22q13 identified by representational difference analysis of ovarian cancer. Genomics, 69: 391-394. doi:10.1006/geno.2000. 6357.
    • (2000) Genomics , vol.69 , pp. 391-394
    • Lin, H.1    Pizer, E.S.2    Morin, P.J.3
  • 77
    • 0034071146 scopus 로고    scopus 로고
    • Loveday, R.L., Greenman, J., Simcox, D.L., Speirs, V., Drew, P.J., Monson, J.R., and Kerin, M.J. 2000. Genetic changes in breast cancer detected by comparative genomic hybridisation. Int. J. Cancer, 86: 494-500. doi:10.1002/(SICI)1097-0215(20000515)86:4〈494::AID-IJC8〉3.0.CO;2-O.
    • Loveday, R.L., Greenman, J., Simcox, D.L., Speirs, V., Drew, P.J., Monson, J.R., and Kerin, M.J. 2000. Genetic changes in breast cancer detected by comparative genomic hybridisation. Int. J. Cancer, 86: 494-500. doi:10.1002/(SICI)1097-0215(20000515)86:4〈494::AID-IJC8〉3.0.CO;2-O.
  • 78
    • 0032532082 scopus 로고    scopus 로고
    • Comparative genomic hybridization analysis of lobular carcinoma in situ and atypical lobular hyperplasia and potential roles for gains and losses of genetic material in breast neoplasia
    • Lu, Y.J., Osin, P., Lakhani, S.R., Di Palma, S., Gusterson, B.A., and Shipley, J.M. 1998. Comparative genomic hybridization analysis of lobular carcinoma in situ and atypical lobular hyperplasia and potential roles for gains and losses of genetic material in breast neoplasia. Cancer Res. 58: 4721-4727.
    • (1998) Cancer Res , vol.58 , pp. 4721-4727
    • Lu, Y.J.1    Osin, P.2    Lakhani, S.R.3    Di Palma, S.4    Gusterson, B.A.5    Shipley, J.M.6
  • 79
    • 10644269326 scopus 로고    scopus 로고
    • Fbxw7/Cdc4 is a p53-dependent., haploinsufficient tumour suppressor gene
    • doi:10.1038/nature03155
    • Mao, J.H., Perez-Losada, J., Wu, D., Delrosario, R., Tsunematsu, R., Nakayama, K.I., et al. 2004. Fbxw7/Cdc4 is a p53-dependent., haploinsufficient tumour suppressor gene. Nature, 432: 775-779. doi:10.1038/nature03155.
    • (2004) Nature , vol.432 , pp. 775-779
    • Mao, J.H.1    Perez-Losada, J.2    Wu, D.3    Delrosario, R.4    Tsunematsu, R.5    Nakayama, K.I.6
  • 80
    • 0038724269 scopus 로고    scopus 로고
    • Transformation of follicular lymphoma to diffuse large cell lymphoma is associated with a heterogeneous set of DNA copy number and gene expression alterations
    • doi:10.1182/blood-2002-07-2119
    • Martinez-Climent, J.A., Alizadeh, A.A., Segraves, R., Blesa, D., Rubio-Moscardo, F., Albertson, D.G., et al. 2003. Transformation of follicular lymphoma to diffuse large cell lymphoma is associated with a heterogeneous set of DNA copy number and gene expression alterations. Blood, 101: 3109-3117. doi:10.1182/blood-2002-07-2119.
    • (2003) Blood , vol.101 , pp. 3109-3117
    • Martinez-Climent, J.A.1    Alizadeh, A.A.2    Segraves, R.3    Blesa, D.4    Rubio-Moscardo, F.5    Albertson, D.G.6
  • 81
    • 25144501364 scopus 로고    scopus 로고
    • ArrayCGHbase: An analysis platform for comparative genomic hybridization microarrays
    • doi:10.1186/1471-2105-6-124
    • Menten, B., Pattyn, F., De Preter, K., Robbrecht, P., Michels, E., Buysse, K., et al. 2005. ArrayCGHbase: an analysis platform for comparative genomic hybridization microarrays. BMC Bioinformatics, 6: 124. doi:10.1186/1471-2105-6-124.
    • (2005) BMC Bioinformatics , vol.6 , pp. 124
    • Menten, B.1    Pattyn, F.2    De Preter, K.3    Robbrecht, P.4    Michels, E.5    Buysse, K.6
  • 83
    • 19944430329 scopus 로고    scopus 로고
    • Candidate genes in breast cancer revealed by microarray-based comparative genomic hybridization of archived tissue
    • Nessling, M., Richter, K., Schwaenen, C., Roerig, P., Wrqbel, G., Wessendorf, S., et al. 2005. Candidate genes in breast cancer revealed by microarray-based comparative genomic hybridization of archived tissue. Cancer Res. 65: 439447.
    • (2005) Cancer Res , vol.65 , pp. 439447
    • Nessling, M.1    Richter, K.2    Schwaenen, C.3    Roerig, P.4    Wrqbel, G.5    Wessendorf, S.6
  • 85
    • 0030658021 scopus 로고    scopus 로고
    • Nishizaki, T., Chew, K., Chu, L., Isola, J., Kallioniemi, A., Weidner, N., and Waldman, F.M. 1997. Genetic alterations in lobular breast cancer by comparative genomic hybridization. Int. J. Cancer, 74: 513-517. doi:10.1002/(SICI)1097-0215(19971021) 74:5〈513::AID-IJC6〉3.0.CO;2-6.
    • Nishizaki, T., Chew, K., Chu, L., Isola, J., Kallioniemi, A., Weidner, N., and Waldman, F.M. 1997. Genetic alterations in lobular breast cancer by comparative genomic hybridization. Int. J. Cancer, 74: 513-517. doi:10.1002/(SICI)1097-0215(19971021) 74:5〈513::AID-IJC6〉3.0.CO;2-6.
  • 86
    • 3042770635 scopus 로고    scopus 로고
    • Array-based comparative genomic hybridization of ductal carcinoma in situ and synchronous invasive lobular cancer
    • doi:10.1016/j.humpath. 2003.11.009
    • Nyante, S.J., Devries, S., Chen, Y.Y., and Hwang, E.S. 2004. Array-based comparative genomic hybridization of ductal carcinoma in situ and synchronous invasive lobular cancer. Hum. Pathol. 35: 759-763. doi:10.1016/j.humpath. 2003.11.009.
    • (2004) Hum. Pathol , vol.35 , pp. 759-763
    • Nyante, S.J.1    Devries, S.2    Chen, Y.Y.3    Hwang, E.S.4
  • 88
    • 26244466212 scopus 로고    scopus 로고
    • Cytogenetic differences in breast cancer samples between German and Japanese patients
    • doi:10.1136/jcp.2004. 022392
    • Packeisen, J., Nakachi, K., Boecker, W., Brandt, B., and Buerger, H. 2005. Cytogenetic differences in breast cancer samples between German and Japanese patients. J. Clin. Pathol. 58: 1101-1103. doi:10.1136/jcp.2004. 022392.
    • (2005) J. Clin. Pathol , vol.58 , pp. 1101-1103
    • Packeisen, J.1    Nakachi, K.2    Boecker, W.3    Brandt, B.4    Buerger, H.5
  • 89
    • 0038784580 scopus 로고    scopus 로고
    • Frequent E-cadherin gene inactivation by loss of heterozygosity in pleomorphic lobular carcinoma of the breast
    • doi:10.1097/01.MP.0000073974.42583.F7
    • Palacios, J., Sarrio, D., Garcia-Macias, M.C., Bryant, B., Sobel, M.E., and Merino, M.J. 2003. Frequent E-cadherin gene inactivation by loss of heterozygosity in pleomorphic lobular carcinoma of the breast. Mod. Pathol. 16: 674-678. doi:10.1097/01.MP.0000073974.42583.F7.
    • (2003) Mod. Pathol , vol.16 , pp. 674-678
    • Palacios, J.1    Sarrio, D.2    Garcia-Macias, M.C.3    Bryant, B.4    Sobel, M.E.5    Merino, M.J.6
  • 90
    • 3242672465 scopus 로고    scopus 로고
    • Whole genome scanning identifies genotypes associated with recurrence and metastasis in prostate tumors
    • doi:10.1093/hmg/ddh155
    • Paris, P.L., Andaya, A., Fridlyand, J., Jain, A.N., Weinberg, V., Kowbel, D., et al. 2004. Whole genome scanning identifies genotypes associated with recurrence and metastasis in prostate tumors. Hum. Mol. Genet. 13: 1303-1313. doi:10.1093/hmg/ddh155.
    • (2004) Hum. Mol. Genet , vol.13 , pp. 1303-1313
    • Paris, P.L.1    Andaya, A.2    Fridlyand, J.3    Jain, A.N.4    Weinberg, V.5    Kowbel, D.6
  • 92
    • 25444531432 scopus 로고    scopus 로고
    • A statistical approach for array CGH data analysis
    • doi:10.1186/1471-2105-6-27
    • Picard, F., Robin, S., Lavielle, M., Vaisse, C., and Daudin, J.J. 2005. A statistical approach for array CGH data analysis. BMC Bioinformatics, 6: 27. doi:10.1186/1471-2105-6-27.
    • (2005) BMC Bioinformatics , vol.6 , pp. 27
    • Picard, F.1    Robin, S.2    Lavielle, M.3    Vaisse, C.4    Daudin, J.J.5
  • 93
    • 20044375763 scopus 로고    scopus 로고
    • Array comparative genomic hybridization and its applications in cancer
    • doi:10.1038/ng1569
    • Pinkel, D., and Albertson, D.G. 2005a. Array comparative genomic hybridization and its applications in cancer. Nat. Genet. 37 (Suppl.): S11-S17. doi:10.1038/ng1569.
    • (2005) Nat. Genet , vol.37 , Issue.SUPPL.
    • Pinkel, D.1    Albertson, D.G.2
  • 94
    • 25844449738 scopus 로고    scopus 로고
    • 20056. Comparative genomic hybridization
    • doi:10.1146/annurev.genom.6. 080604.162140
    • Pinkel, D., and Albertson, D.G. 20056. Comparative genomic hybridization. Annu. Rev. Genomics Hum. Genet. 6: 331-354. doi:10.1146/annurev.genom.6. 080604.162140.
    • Annu. Rev. Genomics Hum. Genet , vol.6 , pp. 331-354
    • Pinkel, D.1    Albertson, D.G.2
  • 95
    • 17344371740 scopus 로고    scopus 로고
    • High resolution analysis of DNA copy number variation using comparative genomic hybridization to microarrays
    • doi:10.1038/2524
    • Pinkel, D., Segraves, R., Sudar, D., Clark, S., Poole, I., Kowbel, D., et al. 1998. High resolution analysis of DNA copy number variation using comparative genomic hybridization to microarrays. Nat. Genet. 20: 207-211. .] doi:10.1038/2524.
    • (1998) Nat. Genet , vol.20 , pp. 207-211
    • Pinkel, D.1    Segraves, R.2    Sudar, D.3    Clark, S.4    Poole, I.5    Kowbel, D.6
  • 97
    • 13844250828 scopus 로고    scopus 로고
    • Microarray analysis reveals a major direct role of DNA copy number alteration in the transcriptional program of human breast tumors
    • doi:10.1073/pnas.162471999
    • Pollack, J.R., Sorlie, T., Perou, C.M., Rees, C.A., Jeffrey, S.S., Lonning, P.E., et al. 2002. Microarray analysis reveals a major direct role of DNA copy number alteration in the transcriptional program of human breast tumors. Proc. Natl. Acad. Sci. U.S.A. 99: 12963-12968. doi:10.1073/pnas.162471999.
    • (2002) Proc. Natl. Acad. Sci. U.S.A , vol.99 , pp. 12963-12968
    • Pollack, J.R.1    Sorlie, T.2    Perou, C.M.3    Rees, C.A.4    Jeffrey, S.S.5    Lonning, P.E.6
  • 98
    • 16844378880 scopus 로고    scopus 로고
    • Breast cancer gene discovery
    • Polyak, K. 2002. Breast cancer gene discovery. Expert Rev. Mol. Med. 2002: 1-18.
    • (2002) Expert Rev. Mol. Med , vol.2002 , pp. 1-18
    • Polyak, K.1
  • 99
    • 27744586900 scopus 로고    scopus 로고
    • NRG1 gene rearrangements in clinical breast cancer: Identification of an adjacent novel amplicon associated with poor prognosis
    • doi:10.1038/sj.onc.1208892
    • Prentice, L.M., Shadeo, A., Lestou, V.S., Miller, M.A., deLeeuw, R.J., Makretsov, N., et al. 2005. NRG1 gene rearrangements in clinical breast cancer: identification of an adjacent novel amplicon associated with poor prognosis. Oncogene, 24: 7281-7289. doi:10.1038/sj.onc.1208892.
    • (2005) Oncogene , vol.24 , pp. 7281-7289
    • Prentice, L.M.1    Shadeo, A.2    Lestou, V.S.3    Miller, M.A.4    deLeeuw, R.J.5    Makretsov, N.6
  • 100
    • 0037099732 scopus 로고    scopus 로고
    • Evaluation of HER-2/neu gene amplification and overexpression: Comparison of frequently used assay methods in a molecularly characterized cohort of breast cancer specimens
    • Press, M.F., Slamon, D.J., Flom, K.J., Park, J., Zhou, J.Y., and Bernstein, L. 2002. Evaluation of HER-2/neu gene amplification and overexpression: comparison of frequently used assay methods in a molecularly characterized cohort of breast cancer specimens. J. Clin. Oncol. 20: 3095-3105.
    • (2002) J. Clin. Oncol , vol.20 , pp. 3095-3105
    • Press, M.F.1    Slamon, D.J.2    Flom, K.J.3    Park, J.4    Zhou, J.Y.5    Bernstein, L.6
  • 101
    • 7944222014 scopus 로고    scopus 로고
    • Expression of the transcription factor CTCF in invasive breast cancer: A candidate gene located at 16q22.1
    • doi:10.1038/sj.bjc. 6602144
    • Rakha, E.A., Pinder, S.E., Paish, C.E., and Ellis, I.O. 2004. Expression of the transcription factor CTCF in invasive breast cancer: a candidate gene located at 16q22.1. Br. J. Cancer, 91: 1591-1596. doi:10.1038/sj.bjc. 6602144.
    • (2004) Br. J. Cancer , vol.91 , pp. 1591-1596
    • Rakha, E.A.1    Pinder, S.E.2    Paish, C.E.3    Ellis, I.O.4
  • 102
    • 1642535541 scopus 로고    scopus 로고
    • Genomic and expression analysis of the 8p11-12 amplicon in human breast cancer cell lines
    • doi:10.1158/0008-5472.CAN-03-1022
    • Ray, M.E., Yang, Z.Q., Albertson, D., Kleer, C.G., Washburn, J.G., Macoska, J.A., and Ethier, S.P. 2004. Genomic and expression analysis of the 8p11-12 amplicon in human breast cancer cell lines. Cancer Res. 64: 40-47. doi:10.1158/0008-5472.CAN-03-1022.
    • (2004) Cancer Res , vol.64 , pp. 40-47
    • Ray, M.E.1    Yang, Z.Q.2    Albertson, D.3    Kleer, C.G.4    Washburn, J.G.5    Macoska, J.A.6    Ethier, S.P.7
  • 103
    • 33751329250 scopus 로고    scopus 로고
    • Global variation in copy number in the human genome
    • doi:10.1038/nature05329
    • Redon, R., Ishikawa, S., Fitch, K.R., Feuk, L., Perry, G.H., Andrews, T.D., et al. 2006. Global variation in copy number in the human genome. Nature, 444: 444-454. doi:10.1038/nature05329.
    • (2006) Nature , vol.444 , pp. 444-454
    • Redon, R.1    Ishikawa, S.2    Fitch, K.R.3    Feuk, L.4    Perry, G.H.5    Andrews, T.D.6
  • 104
    • 0043155851 scopus 로고    scopus 로고
    • The diagnosis and management of pre-invasive breast disease: Genetic alterations in pre-invasive lesions
    • doi:10.1186/bcr650
    • Reis-Filho, J.S., and Lakhani, S.R. 2003. The diagnosis and management of pre-invasive breast disease: genetic alterations in pre-invasive lesions. Breast Cancer Res. 5: 313-319. doi:10.1186/bcr650.
    • (2003) Breast Cancer Res , vol.5 , pp. 313-319
    • Reis-Filho, J.S.1    Lakhani, S.R.2
  • 105
    • 0345600086 scopus 로고    scopus 로고
    • Pathologic quiz case: A 93-year-old woman with an enlarged and tender left breast. Histiocytoid variant of lobular breast carcinoma
    • Reis-Filho, J.S., Fulford, L.G., Freeman, A., and Lakhani, S.R. 2003. Pathologic quiz case: a 93-year-old woman with an enlarged and tender left breast. Histiocytoid variant of lobular breast carcinoma. Arch. Pathol. Lab. Med. 127: 1626-1628.
    • (2003) Arch. Pathol. Lab. Med , vol.127 , pp. 1626-1628
    • Reis-Filho, J.S.1    Fulford, L.G.2    Freeman, A.3    Lakhani, S.R.4
  • 106
    • 27944463078 scopus 로고    scopus 로고
    • The molecular genetics of breast cancer: The contribution of comparative genomic hybridization
    • Reis-Filho, J.S., Simpson, P.T., Gale, T., and Lakhani, S.R. 2005. The molecular genetics of breast cancer: the contribution of comparative genomic hybridization. Pathol. Res. Pract. 201: 713-725.
    • (2005) Pathol. Res. Pract , vol.201 , pp. 713-725
    • Reis-Filho, J.S.1    Simpson, P.T.2    Gale, T.3    Lakhani, S.R.4
  • 107
    • 0033918825 scopus 로고    scopus 로고
    • Richard, F., Pacyna-Gengelbach, M., Schluns, K., Fleige, B., Winzer, K.J., Szymas, J., et al. 2000. Patterns of chromosomal imbalances in invasive breast cancer. Int. J. Cancer, 89: 305-310. doi:10.1002/1097- 0215(20000520)89:3〈305::AID-IJC15〉3.0. CO;2-8.
    • Richard, F., Pacyna-Gengelbach, M., Schluns, K., Fleige, B., Winzer, K.J., Szymas, J., et al. 2000. Patterns of chromosomal imbalances in invasive breast cancer. Int. J. Cancer, 89: 305-310. doi:10.1002/1097- 0215(20000520)89:3〈305::AID-IJC15〉3.0. CO;2-8.
  • 108
    • 0033119769 scopus 로고    scopus 로고
    • Comparative genomic hybridization of breast tumors stratified by histological grade reveals new insights into the biological progression of breast cancer
    • Roylance, R., Gorman, P., Harris, W., Liebmann, R., Barnes, D., Hanby, A., and Sheer, D. 1999. Comparative genomic hybridization of breast tumors stratified by histological grade reveals new insights into the biological progression of breast cancer. Cancer Res. 59: 1433-1436.
    • (1999) Cancer Res , vol.59 , pp. 1433-1436
    • Roylance, R.1    Gorman, P.2    Harris, W.3    Liebmann, R.4    Barnes, D.5    Hanby, A.6    Sheer, D.7
  • 109
  • 110
    • 21144446267 scopus 로고    scopus 로고
    • Mantle-cell lymphoma genotypes identified with CGH to BAC microarrays define a leukemic subgroup of disease and predict patient outcome
    • doi:10.1182/blood-2004-10-3907
    • Rubio-Moscardo, F., Climent, J., Siebert, R., Piris, M.A., Martin-Subero, J.I., Nielander, I., et al. 2005. Mantle-cell lymphoma genotypes identified with CGH to BAC microarrays define a leukemic subgroup of disease and predict patient outcome. Blood, 105: 4445-4454. doi:10.1182/blood-2004-10-3907.
    • (2005) Blood , vol.105 , pp. 4445-4454
    • Rubio-Moscardo, F.1    Climent, J.2    Siebert, R.3    Piris, M.A.4    Martin-Subero, J.I.5    Nielander, I.6
  • 111
    • 3242808027 scopus 로고    scopus 로고
    • Large-scale copy number polymorphism in the human genome
    • doi:10.1126/science.1098918
    • Sebat, J., Lakshmi, B., Troge, J., Alexander, J., Young, J., Lundin, P., et al. 2004. Large-scale copy number polymorphism in the human genome. Science, 305: 525-528. doi:10.1126/science.1098918.
    • (2004) Science , vol.305 , pp. 525-528
    • Sebat, J.1    Lakshmi, B.2    Troge, J.3    Alexander, J.4    Young, J.5    Lundin, P.6
  • 112
    • 0036184598 scopus 로고    scopus 로고
    • Loss of heterozygosity and allelic imbalance in apocrine metaplasia of the breast: Microdissection microsatellite analysis
    • doi:10.1002/path.1043
    • Selim, A.G., Ryan, A., El-Ayat, G., and Wells, C.A. 2002. Loss of heterozygosity and allelic imbalance in apocrine metaplasia of the breast: microdissection microsatellite analysis. J. Pathol. 196: 287-291. doi:10.1002/path.1043.
    • (2002) J. Pathol , vol.196 , pp. 287-291
    • Selim, A.G.1    Ryan, A.2    El-Ayat, G.3    Wells, C.A.4
  • 113
    • 0035399798 scopus 로고    scopus 로고
    • Clinical relevance of genomic aberrations in homogeneously treated high-risk stage II/III breast cancer patients
    • doi:10.1002/ijc.1296
    • Seute, A., Sinn, H.P., Schlenk, R.F., Emig, R., Wallwiener, D., Grischke, E.M., et al. 2001. Clinical relevance of genomic aberrations in homogeneously treated high-risk stage II/III breast cancer patients. Int. J. Cancer, 93: 80-84. doi:10.1002/ijc.1296.
    • (2001) Int. J. Cancer , vol.93 , pp. 80-84
    • Seute, A.1    Sinn, H.P.2    Schlenk, R.F.3    Emig, R.4    Wallwiener, D.5    Grischke, E.M.6
  • 115
    • 0043142420 scopus 로고    scopus 로고
    • The diagnosis and management of pre-invasive breast disease: Pathology of atypical lobular hyperplasia and lobular carcinoma in situ
    • doi:10.1186/bcr624
    • Simpson, P.T., Gale, T., Fulford, L.G., Reis-Filho, J.S., and Lakhani, S.R. 2003. The diagnosis and management of pre-invasive breast disease: pathology of atypical lobular hyperplasia and lobular carcinoma in situ. Breast Cancer Res. 5: 258-262. doi:10.1186/bcr624.
    • (2003) Breast Cancer Res , vol.5 , pp. 258-262
    • Simpson, P.T.1    Gale, T.2    Fulford, L.G.3    Reis-Filho, J.S.4    Lakhani, S.R.5
  • 116
    • 13644259990 scopus 로고    scopus 로고
    • Molecular evolution of breast cancer
    • doi:10.1002/path.1691
    • Simpson, P.T., Reis-Filho, J.S., Gale, T., and Lakhani, S.R. 2005. Molecular evolution of breast cancer. J. Pathol. 205: 248-254. doi:10.1002/path.1691.
    • (2005) J. Pathol , vol.205 , pp. 248-254
    • Simpson, P.T.1    Reis-Filho, J.S.2    Gale, T.3    Lakhani, S.R.4
  • 117
    • 0035845511 scopus 로고    scopus 로고
    • Gene expression patterns of breast carcinomas distinguish tumor subclasses with clinical implications
    • doi:10.1073/pnas.191367098
    • Sorlie, T., Perou, C.M., Tibshirani, R., Aas, T., Geisler, S., Johnsen, H., et al. 2001. Gene expression patterns of breast carcinomas distinguish tumor subclasses with clinical implications. Proc. Natl. Acad. Sci. U.S.A. 98: 10869-10874. doi:10.1073/pnas.191367098.
    • (2001) Proc. Natl. Acad. Sci. U.S.A , vol.98 , pp. 10869-10874
    • Sorlie, T.1    Perou, C.M.2    Tibshirani, R.3    Aas, T.4    Geisler, S.5    Johnsen, H.6
  • 118
    • 0036320867 scopus 로고    scopus 로고
    • Invasive micropapillary carcinoma of the breast is associated with chromosome 8 abnormalities detected by comparative genomic hybridization
    • doi:10.1053/hupa.2002.124034
    • Thor, A.D., Eng, C., Devries, S., Paterakos, M., Watkin, W.G., Edgerton, S., et al. 2002. Invasive micropapillary carcinoma of the breast is associated with chromosome 8 abnormalities detected by comparative genomic hybridization. Hum. Pathol. 33: 628-631. doi:10.1053/hupa.2002.124034.
    • (2002) Hum. Pathol , vol.33 , pp. 628-631
    • Thor, A.D.1    Eng, C.2    Devries, S.3    Paterakos, M.4    Watkin, W.G.5    Edgerton, S.6
  • 120
    • 13444292834 scopus 로고    scopus 로고
    • Comparative genomic hybridization profiles in human BRCA1 and BRCA2 breast tumors highlight differential sets of genomic aberrations
    • van Beers, E.H., van Welsem, T., Wessels, L.F., Li, Y., Oldenburg, R.A., Devilee, P., et al. 2005. Comparative genomic hybridization profiles in human BRCA1 and BRCA2 breast tumors highlight differential sets of genomic aberrations. Cancer Res. 65: 822-827.
    • (2005) Cancer Res , vol.65 , pp. 822-827
    • van Beers, E.H.1    van Welsem, T.2    Wessels, L.F.3    Li, Y.4    Oldenburg, R.A.5    Devilee, P.6
  • 121
    • 18244409687 scopus 로고    scopus 로고
    • Gene expression profiling predicts clinical outcome of breast cancer
    • doi:10.1038/415530a
    • van 't Veer, L.J., Dai, H., van de Vijver, M.J., He, Y.D., Hart, A.A., Mao, M., et al. 2002. Gene expression profiling predicts clinical outcome of breast cancer. Nature, 415: 530-536. doi:10.1038/415530a.
    • (2002) Nature , vol.415 , pp. 530-536
    • van 't Veer, L.J.1    Dai, H.2    van de Vijver, M.J.3    He, Y.D.4    Hart, A.A.5    Mao, M.6
  • 122
    • 0034673232 scopus 로고    scopus 로고
    • Chromosomal alterations in ductal carcinomas in situ and their in situ recurrences
    • doi:10.1093/jnci/92.4.313
    • Waldman, F.M., DeVries, S., Chew, K.L., Moore, D.H., 2nd, Kerlikowske, K., and Ljung, B.M. 2000. Chromosomal alterations in ductal carcinomas in situ and their in situ recurrences. J. Natl. Cancer Inst. 92: 313-320. doi:10.1093/jnci/92.4.313.
    • (2000) J. Natl. Cancer Inst , vol.92 , pp. 313-320
    • Waldman, F.M.1    DeVries, S.2    Chew, K.L.3    Moore 2nd, D.H.4    Kerlikowske, K.5    Ljung, B.M.6
  • 124
    • 0034655991 scopus 로고    scopus 로고
    • BASC, a super complex of BRCA1-associated proteins involved in the recognition and repair of aberrant DNA structures
    • Wang, Y., Cortez, D., Yazdi, P., Neff, N., Elledge, S.J., and Qin, J. 2000. BASC, a super complex of BRCA1-associated proteins involved in the recognition and repair of aberrant DNA structures. Genes Dev. 14: 927-939.
    • (2000) Genes Dev , vol.14 , pp. 927-939
    • Wang, Y.1    Cortez, D.2    Yazdi, P.3    Neff, N.4    Elledge, S.J.5    Qin, J.6
  • 125
    • 12444256820 scopus 로고    scopus 로고
    • A method for calling gains and losses in array CGH data
    • doi:10.1093/biostatistics/kxh017
    • Wang, P., Kim, Y., Pollack, J., Narsimhan, B., and Tibshirani, R. 2005. A method for calling gains and losses in array CGH data. Biostatistics, 6: 45-58. doi:10.1093/biostatistics/kxh017.
    • (2005) Biostatistics , vol.6 , pp. 45-58
    • Wang, P.1    Kim, Y.2    Pollack, J.3    Narsimhan, B.4    Tibshirani, R.5
  • 126
    • 0142021888 scopus 로고    scopus 로고
    • Breast cancer in young women (< or = 35 years): Genomic aberrations detected by comparative genomic hybridization
    • doi:10.1002/ijc.11460
    • Weber-Mangal, S., Sinn, H.P., Popp, S., Klaes, R., Emig, R., Bentz, M., et al. 2003. Breast cancer in young women (< or = 35 years): genomic aberrations detected by comparative genomic hybridization. Int. J. Cancer, 107: 583-592. doi:10.1002/ijc.11460.
    • (2003) Int. J. Cancer , vol.107 , pp. 583-592
    • Weber-Mangal, S.1    Sinn, H.P.2    Popp, S.3    Klaes, R.4    Emig, R.5    Bentz, M.6
  • 128
    • 18544365155 scopus 로고    scopus 로고
    • Genomic alterations in primary gastric adenocarcinomas correlate with clinicopathological characteristics and survival
    • Weiss, M.M., Kuipers, E.J., Postma, C., Snijders, A.M., Pinkel, D., Meuwissen, S.G., Albertson, D., and Meijer, G.A. 2004. Genomic alterations in primary gastric adenocarcinomas correlate with clinicopathological characteristics and survival. Cell. Oncol. 26: 307-317.
    • (2004) Cell. Oncol , vol.26 , pp. 307-317
    • Weiss, M.M.1    Kuipers, E.J.2    Postma, C.3    Snijders, A.M.4    Pinkel, D.5    Meuwissen, S.G.6    Albertson, D.7    Meijer, G.A.8
  • 129
    • 0036895886 scopus 로고    scopus 로고
    • Molecular classification of breast carcinomas by comparative genomic hybridization: A specific somatic genetic profile for BRCA1 tumors
    • Wessels, L.F., van Welsem, T., Hart, A.A., van't Veer, L.J., Reinders, M.J., and Nederlof, P.M. 2002. Molecular classification of breast carcinomas by comparative genomic hybridization: a specific somatic genetic profile for BRCA1 tumors. Cancer Res. 62: 7110-7117.
    • (2002) Cancer Res , vol.62 , pp. 7110-7117
    • Wessels, L.F.1    van Welsem, T.2    Hart, A.A.3    van't Veer, L.J.4    Reinders, M.J.5    Nederlof, P.M.6
  • 130
    • 27944455289 scopus 로고    scopus 로고
    • A comparison study: Applying segmentation to array CGH data for downstream analyses
    • doi:10.1093/bioinformatics/bti677
    • Willenbrock, H., and Fridlyand, J. 2005. A comparison study: applying segmentation to array CGH data for downstream analyses. Bioinformatics, 21: 4084-4091. doi:10.1093/bioinformatics/bti677.
    • (2005) Bioinformatics , vol.21 , pp. 4084-4091
    • Willenbrock, H.1    Fridlyand, J.2
  • 131
    • 33750405268 scopus 로고    scopus 로고
    • ArrayFusion: A web application for multi-dimensional analysis of CGH, SNP and microarray data
    • doi:10.1093/ bioinformatics/bt1457
    • Yang, T.P., Chang, T.Y., Lin, C.H., Hsu, M.T., and Wang, H.W. 2006. ArrayFusion: a web application for multi-dimensional analysis of CGH, SNP and microarray data. Bioinformatics, 22: 2697-2698. doi:10.1093/ bioinformatics/bt1457.
    • (2006) Bioinformatics , vol.22 , pp. 2697-2698
    • Yang, T.P.1    Chang, T.Y.2    Lin, C.H.3    Hsu, M.T.4    Wang, H.W.5
  • 132
    • 32644441984 scopus 로고    scopus 로고
    • BAC to the future! or oligonucleotides: A perspective for micro array comparative genomic hybridization (array CGH)
    • doi:10.1093/nar/gkj456
    • Ylstra, B., van den Ijssel, P., Carvalho, B., Brakenhoff, R.H., and Meijer, G.A. 2006. BAC to the future! or oligonucleotides: a perspective for micro array comparative genomic hybridization (array CGH). Nucleic Acids Res. 34: 445-450. doi:10.1093/nar/gkj456.
    • (2006) Nucleic Acids Res , vol.34 , pp. 445-450
    • Ylstra, B.1    van den Ijssel, P.2    Carvalho, B.3    Brakenhoff, R.H.4    Meijer, G.A.5
  • 133
    • 33751527925 scopus 로고    scopus 로고
    • Develoment of bioinformatics resources for display and analysis of copy number and other structural variants in the human genome
    • doi:10.1159/000095916
    • Zhang, J., Feuk, L., Duggan, G.E., Khaja, R., and Scherer, S.W. 2006. Develoment of bioinformatics resources for display and analysis of copy number and other structural variants in the human genome. Cytogenet. Genome Res. 115: 205-214. doi:10.1159/000095916.
    • (2006) Cytogenet. Genome Res , vol.115 , pp. 205-214
    • Zhang, J.1    Feuk, L.2    Duggan, G.E.3    Khaja, R.4    Scherer, S.W.5
  • 134
    • 0033618621 scopus 로고    scopus 로고
    • Association of BRCA1 with the hRad50-hMre11-p95 complex and the DNA damage response
    • doi:10.1126/science.285.5428.747
    • Zhong, Q., Chen, C.-F., Li, S., Chen, Y., Wang, C.-C., Xiao, J., et al. 1999. Association of BRCA1 with the hRad50-hMre11-p95 complex and the DNA damage response. Science, 285: 747-750. doi:10.1126/science.285.5428.747.
    • (1999) Science , vol.285 , pp. 747-750
    • Zhong, Q.1    Chen, C.-F.2    Li, S.3    Chen, Y.4    Wang, C.-C.5    Xiao, J.6
  • 135
    • 0036278474 scopus 로고    scopus 로고
    • Genomic imbalances detected by comparative genomic hybridization are prognostic markers in invasive ductal breast carcinomas
    • doi:10.1046/j.1365-2559. 2002.01413.x
    • Zudaire, I., Odero, M.D., Caballero, C., Valenti, C., Martinez-Penuela, J.M., Isola, J., and Calasanz, M.J. 2002. Genomic imbalances detected by comparative genomic hybridization are prognostic markers in invasive ductal breast carcinomas. Histopathology, 40: 547-555. doi:10.1046/j.1365-2559. 2002.01413.x.
    • (2002) Histopathology , vol.40 , pp. 547-555
    • Zudaire, I.1    Odero, M.D.2    Caballero, C.3    Valenti, C.4    Martinez-Penuela, J.M.5    Isola, J.6    Calasanz, M.J.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.