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Volumn 12, Issue REV. ISS. 2, 2003, Pages

Genomic microarrays in human genetic disease and cancer

Author keywords

[No Author keywords available]

Indexed keywords

CANCER GENETICS; CHROMOSOME ABERRATION; COMPARATIVE GENOMIC HYBRIDIZATION; CPG ISLAND; DEVELOPMENTAL DISORDER; DISEASE ASSOCIATION; DNA MICROARRAY; DNA SEQUENCE; GENE EXPRESSION; GENE IDENTIFICATION; GENE MAPPING; GENE MUTATION; GENETIC DISORDER; GENOMICS; HUMAN; MEDICAL GENETICS; MENTAL DEFICIENCY; MOLECULAR GENETICS; PRIORITY JOURNAL; REVIEW; SENSITIVITY ANALYSIS; SOLID TUMOR; TUMOR CLASSIFICATION;

EID: 0141994858     PISSN: 09646906     EISSN: None     Source Type: Journal    
DOI: 10.1093/hmg/ddg261     Document Type: Review
Times cited : (306)

References (67)
  • 4
    • 0037422174 scopus 로고    scopus 로고
    • Hidden gene amplifications in aggressive B-cell non-Hodgkin lymphomas detected by microarray-based comparative genomic hybridization
    • Wessendorf, S., Schwaenen, C., Kohlhammer, H., Kienle, D., Wrobel, G., Barth, T.F., Nessling, M., Moller, P., Dohner, H., Lichter, P. et al. (2003) Hidden gene amplifications in aggressive B-cell non-Hodgkin lymphomas detected by microarray-based comparative genomic hybridization. Oncogene, 22, 1425-1429.
    • (2003) Oncogene , vol.22 , pp. 1425-1429
    • Wessendorf, S.1    Schwaenen, C.2    Kohlhammer, H.3    Kienle, D.4    Wrobel, G.5    Barth, T.F.6    Nessling, M.7    Moller, P.8    Dohner, H.9    Lichter, P.10
  • 5
    • 0037315428 scopus 로고    scopus 로고
    • Whole genome analysis of genetic alterations in small DNA samples using hyperbranched strand displacement amplification and array-CGH
    • Lage, J.M., Leamon, J.H., Pejovic, T., Hamann, S., Lacey, M., Dillon, D., Segraves, R., Vossbrinck, B., Gonzalez, A., Pinkel, D. et al. (2003) Whole genome analysis of genetic alterations in small DNA samples using hyperbranched strand displacement amplification and array-CGH. Genome Res., 13, 294-307.
    • (2003) Genome Res. , vol.13 , pp. 294-307
    • Lage, J.M.1    Leamon, J.H.2    Pejovic, T.3    Hamann, S.4    Lacey, M.5    Dillon, D.6    Segraves, R.7    Vossbrinck, B.8    Gonzalez, A.9    Pinkel, D.10
  • 6
    • 17344371740 scopus 로고    scopus 로고
    • High resolution analysis of DNA copy number variation using comparative genomic hybridization to microarrays
    • Pinkel, D., Segraves, R., Sudar, D., Clark, S., Poole, I., Kowbel, D., Collins, C., Kuo, W.L., Chen, C., Zhai, Y. et al. (1998) High resolution analysis of DNA copy number variation using comparative genomic hybridization to microarrays. Nat. Genet., 20, 207-211.
    • (1998) Nat. Genet. , vol.20 , pp. 207-211
    • Pinkel, D.1    Segraves, R.2    Sudar, D.3    Clark, S.4    Poole, I.5    Kowbel, D.6    Collins, C.7    Kuo, W.L.8    Chen, C.9    Zhai, Y.10
  • 8
    • 0036218046 scopus 로고    scopus 로고
    • Genome-wide detection of chromosomal imbalances in tumors using BAC microarrays
    • Cai, W.W., Mao, J.H., Chow, C.W., Damani, S., Balmain, A. and Bradley, A. (2002) Genome-wide detection of chromosomal imbalances in tumors using BAC microarrays. Nat. Biotechnol., 20, 393-396.
    • (2002) Nat. Biotechnol. , vol.20 , pp. 393-396
    • Cai, W.W.1    Mao, J.H.2    Chow, C.W.3    Damani, S.4    Balmain, A.5    Bradley, A.6
  • 13
    • 0026736251 scopus 로고
    • Degenerate oligonucleotide-primed PCR: General amplification of target DNA by a single degenerate primer
    • Telenius, H., Carter, N.P., Bebb, C.E., Nordenskjold, M., Ponder, B.A. and Tunnacliffe, A. (1992) Degenerate oligonucleotide-primed PCR: general amplification of target DNA by a single degenerate primer. Genomics, 13, 718-725.
    • (1992) Genomics , vol.13 , pp. 718-725
    • Telenius, H.1    Carter, N.P.2    Bebb, C.E.3    Nordenskjold, M.4    Ponder, B.A.5    Tunnacliffe, A.6
  • 20
  • 22
    • 0036830160 scopus 로고    scopus 로고
    • Amplicon mapping and transcriptional analysis pinpoint cyclin L as a candidate oncogene in head and neck cancer
    • Redon, R., Hussenet, T., Bour, G., Caulee, K., Jost, B., Muller, D., Abecassis, J. and du Manoir, S. (2002) Amplicon mapping and transcriptional analysis pinpoint cyclin L as a candidate oncogene in head and neck cancer. Cancer Res., 62, 6211-6217.
    • (2002) Cancer Res. , vol.62 , pp. 6211-6217
    • Redon, R.1    Hussenet, T.2    Bour, G.3    Caulee, K.4    Jost, B.5    Muller, D.6    Abecassis, J.7    du Manoir, S.8
  • 23
    • 0037372017 scopus 로고    scopus 로고
    • Combined cytogenetic and array-based comparative genomic hybridization analyses of Wilms tumors: Amplification and overexpression of the multidrug resistance associated protein 1 gene (MRP1) in a metachronous tumor
    • Goldstein, M., Rennert, H., Bar-Shira, A., Burstein, Y., Yaron, Y. and Orr-Urtreger, A. (2003) Combined cytogenetic and array-based comparative genomic hybridization analyses of Wilms tumors: amplification and overexpression of the multidrug resistance associated protein 1 gene (MRP1) in a metachronous tumor. Cancer Genet. Cytogenet., 141, 120-127.
    • (2003) Cancer Genet. Cytogenet. , vol.141 , pp. 120-127
    • Goldstein, M.1    Rennert, H.2    Bar-Shira, A.3    Burstein, Y.4    Yaron, Y.5    Orr-Urtreger, A.6
  • 25
    • 0036211011 scopus 로고    scopus 로고
    • Combined comparative genomic hybridization and genomic microarray for detection of gene amplifications in pulmonary artery intimal sarcomas and adrenocortical tumors
    • Zhao, J., Roth, J., Bode-Lesniewska, B., Pfaltz, M., Heitz, P.U. and Komminoth, P. (2002) Combined comparative genomic hybridization and genomic microarray for detection of gene amplifications in pulmonary artery intimal sarcomas and adrenocortical tumors. Genes Chromosomes Cancer, 34, 48-57.
    • (2002) Genes Chromosomes Cancer , vol.34 , pp. 48-57
    • Zhao, J.1    Roth, J.2    Bode-Lesniewska, B.3    Pfaltz, M.4    Heitz, P.U.5    Komminoth, P.6
  • 27
    • 0037441884 scopus 로고    scopus 로고
    • Amplification and overexpression of JUNB is associated with primary cutaneous T-cell lymphomas
    • Mao, X., Orchard, G., Lillington, D.M., Russell-Jones, R., Young, B.D. and Whittaker, S.J. (2003) Amplification and overexpression of JUNB is associated with primary cutaneous T-cell lymphomas. Blood, 101, 1513-1519.
    • (2003) Blood , vol.101 , pp. 1513-1519
    • Mao, X.1    Orchard, G.2    Lillington, D.M.3    Russell-Jones, R.4    Young, B.D.5    Whittaker, S.J.6
  • 29
    • 0038724269 scopus 로고    scopus 로고
    • Transformation of follicular lymphoma to diffuse large cell lymphoma is associated with a heterogeneous set of DNA copy number and gene expression alterations
    • Martinez-Climent, J.A., Alizadeh, A.A., Segraves, R., Blesa, D., Rubio-Moscardo, F., Albertson, D.G., Garcia-Conde, J., Dyer, M.J., Levy, R., Pinkel, D. et al. (2003) Transformation of follicular lymphoma to diffuse large cell lymphoma is associated with a heterogeneous set of DNA copy number and gene expression alterations. Blood, 101, 3109-3117.
    • (2003) Blood , vol.101 , pp. 3109-3117
    • Martinez-Climent, J.A.1    Alizadeh, A.A.2    Segraves, R.3    Blesa, D.4    Rubio-Moscardo, F.5    Albertson, D.G.6    Garcia-Conde, J.7    Dyer, M.J.8    Levy, R.9    Pinkel, D.10
  • 32
    • 0038037230 scopus 로고    scopus 로고
    • Genome-wide array based comparative genomic hybridization reveals genetic homogeneity and frequent copy number increases encompassing CCNE1 in Fallopian tube carcinoma
    • Snijders, A.N., Nowee, M.E., Fridlyand, J., Piek, J.M.J., Dorsman, J.C., Jain, A.N., Pinkel, D., van Diest, P.J., Verheijen, R.H.M. and Albertson, D.G. (2003) Genome-wide array based comparative genomic hybridization reveals genetic homogeneity and frequent copy number increases encompassing CCNE1 in Fallopian tube carcinoma. Oncogene, 22, 4281-4286.
    • (2003) Oncogene , vol.22 , pp. 4281-4286
    • Snijders, A.N.1    Nowee, M.E.2    Fridlyand, J.3    Piek, J.M.J.4    Dorsman, J.C.5    Jain, A.N.6    Pinkel, D.7    van Diest, P.J.8    Verheijen, R.H.M.9    Albertson, D.G.10
  • 36
    • 0037159479 scopus 로고    scopus 로고
    • Usefulness of high-resolution comparative genomic hybridization (CGH) for detecting and characterizing constitutional chromosome abnormalities
    • Ness, G.O., Lybaek, H. and Houge, G. (2002) Usefulness of high-resolution comparative genomic hybridization (CGH) for detecting and characterizing constitutional chromosome abnormalities. Am. J. Med. Genet., 113, 125-136.
    • (2002) Am. J. Med. Genet. , vol.113 , pp. 125-136
    • Ness, G.O.1    Lybaek, H.2    Houge, G.3
  • 37
    • 0036605189 scopus 로고    scopus 로고
    • Additional patient with del(12)(q21.2q22): Further evidence for a candidate region for cardio-facio-cutaneous syndrome?
    • Rauen, K.A., Albertson, D.G., Pinkel, D. and Cotter, P.D. (2002) Additional patient with del(12)(q21.2q22): further evidence for a candidate region for cardio-facio-cutaneous syndrome? Am. J. Med. Genet., 110, 51-56.
    • (2002) Am. J. Med. Genet. , vol.110 , pp. 51-56
    • Rauen, K.A.1    Albertson, D.G.2    Pinkel, D.3    Cotter, P.D.4
  • 40
    • 0038392953 scopus 로고    scopus 로고
    • The use of telomere probes to investigate submicroscopic rearrangements associated with mental retardation
    • Flint, J. and Knight, S. (2003) The use of telomere probes to investigate submicroscopic rearrangements associated with mental retardation. Curr. Opin. Genet. Dev., 13, 310-316.
    • (2003) Curr. Opin. Genet. Dev. , vol.13 , pp. 310-316
    • Flint, J.1    Knight, S.2
  • 41
  • 44
    • 0037335781 scopus 로고    scopus 로고
    • Cytogenetics in reproductive medicine: The contribution of comparative genomic hybridization (CGH)
    • Wells, D. and Levy, B. (2003) Cytogenetics in reproductive medicine: the contribution of comparative genomic hybridization (CGH). Bioessays, 25, 289-300.
    • (2003) Bioessays , vol.25 , pp. 289-300
    • Wells, D.1    Levy, B.2
  • 45
    • 0035864815 scopus 로고    scopus 로고
    • Frequent germline deletion polymorphism of chromosomal region 8p12-p21 identified as a recurrent homozygous deletion in human tumors
    • Ryu, B., Song, J., Sohn, T., Hruban, R.H. and Kern, S.E. (2001) Frequent germline deletion polymorphism of chromosomal region 8p12-p21 identified as a recurrent homozygous deletion in human tumors. Genomics, 72, 108-112.
    • (2001) Genomics , vol.72 , pp. 108-112
    • Ryu, B.1    Song, J.2    Sohn, T.3    Hruban, R.H.4    Kern, S.E.5
  • 47
    • 0034331289 scopus 로고    scopus 로고
    • A frequent deletion polymorphism on chromosome 22q13 identified by representational difference analysis of ovarian cancer
    • Lin, H., Pizer, E.S. and Morin, P.J. (2000) A frequent deletion polymorphism on chromosome 22q13 identified by representational difference analysis of ovarian cancer. Genomics, 69, 391-394.
    • (2000) Genomics , vol.69 , pp. 391-394
    • Lin, H.1    Pizer, E.S.2    Morin, P.J.3
  • 48
    • 0034037394 scopus 로고    scopus 로고
    • An insertion/deletion polymorphism in intron 18 of the type B human natriuretic peptide receptor gene is not associated with cerebral infarction
    • Rahmutula, D., Nakayama, T., Soma, M., Takahashi, Y., Uwabo, J., Sato, M., Izumi, Y., Kanmatsuse, K. and Ozawa, Y. (2000) An insertion/deletion polymorphism in intron 18 of the type B human natriuretic peptide receptor gene is not associated with cerebral infarction. Hypertens. Res., 23, 173-176.
    • (2000) Hypertens. Res. , vol.23 , pp. 173-176
    • Rahmutula, D.1    Nakayama, T.2    Soma, M.3    Takahashi, Y.4    Uwabo, J.5    Sato, M.6    Izumi, Y.7    Kanmatsuse, K.8    Ozawa, Y.9
  • 49
    • 0032906340 scopus 로고    scopus 로고
    • Sequence ariation in the human angiotensin converting enzyme
    • Rieder, M.J., Taylor, S.L., Clark, A.G. and Nickerson, D.A. (1999) Sequence ariation in the human angiotensin converting enzyme. Nat. Genet., 22, 59-62.
    • (1999) Nat. Genet. , vol.22 , pp. 59-62
    • Rieder, M.J.1    Taylor, S.L.2    Clark, A.G.3    Nickerson, D.A.4
  • 50
    • 0030838316 scopus 로고    scopus 로고
    • Polymorphism of the angiotensin-converting enzyme gene and cardiovascular disease
    • Schunkert, H. (1997) Polymorphism of the angiotensin-converting enzyme gene and cardiovascular disease. J. Mol. Med., 75, 867-875.
    • (1997) J. Mol. Med. , vol.75 , pp. 867-875
    • Schunkert, H.1
  • 52
    • 0027179248 scopus 로고
    • Molecular definition of the extreme size polymorphism in apolipoprotein(a)
    • Lackner, C., Cohen, J.C. and Hobbs, H.H. (1993) Molecular definition of the extreme size polymorphism in apolipoprotein(a). Hum. Mol. Genet., 2, 933-940.
    • (1993) Hum. Mol. Genet. , vol.2 , pp. 933-940
    • Lackner, C.1    Cohen, J.C.2    Hobbs, H.H.3
  • 53
    • 0025938419 scopus 로고
    • Expressed hypervariable polymorphism of apolipoprotein (a)
    • Kamboh, M.I., Ferrell, R.E. and Kottke, B.A. (1991) Expressed hypervariable polymorphism of apolipoprotein (a). Am. J. Hum. Genet., 49, 1063-1074.
    • (1991) Am. J. Hum. Genet. , vol.49 , pp. 1063-1074
    • Kamboh, M.I.1    Ferrell, R.E.2    Kottke, B.A.3
  • 54
    • 0034028921 scopus 로고    scopus 로고
    • Structure of chromosomal duplicons and their role in mediating human genomic disorders
    • Ji, Y., Eichler, E.E., Schwartz, S. and Nicholls, R.D. (2000) Structure of chromosomal duplicons and their role in mediating human genomic disorders. Genome Res., 10, 597-610.
    • (2000) Genome Res. , vol.10 , pp. 597-610
    • Ji, Y.1    Eichler, E.E.2    Schwartz, S.3    Nicholls, R.D.4
  • 55
    • 0037837485 scopus 로고    scopus 로고
    • Genome-wide detection of segmental duplications and potential assembly errors in the human genome sequence
    • Cheung, J., Estivill, X., Khaja, R., MacDonald, J.R., Lau, K., Tsui, L.C. and Scherer, S.W. (2003) Genome-wide detection of segmental duplications and potential assembly errors in the human genome sequence. Genome Biol., 4, R25.
    • (2003) Genome Biol. , vol.4
    • Cheung, J.1    Estivill, X.2    Khaja, R.3    MacDonald, J.R.4    Lau, K.5    Tsui, L.C.6    Scherer, S.W.7
  • 56
    • 0031731487 scopus 로고    scopus 로고
    • Genomic disorders: Structural features of the genome can lead to DNA rearrangements and human disease traits
    • Lupski, J.R. (1998) Genomic disorders: structural features of the genome can lead to DNA rearrangements and human disease traits. Trends Genet., 14, 417-422.
    • (1998) Trends Genet. , vol.14 , pp. 417-422
    • Lupski, J.R.1
  • 57
    • 0036360488 scopus 로고    scopus 로고
    • Differential methylation hybridization using CpG island arrays
    • Yan, P.S., Wei, S.H. and Huang, T.H. (2002) Differential methylation hybridization using CpG island arrays. Meth. Mol. Biol., 200, 87-100.
    • (2002) Meth. Mol. Biol. , vol.200 , pp. 87-100
    • Yan, P.S.1    Wei, S.H.2    Huang, T.H.3
  • 58
    • 12244286046 scopus 로고    scopus 로고
    • Oligonucleotide-based microarray for DNA methylation analysis: Principles and applications
    • Shi, H., Maier, S., Nimmrich, I., Yan, P.S., Caldwell, C.W., Olek, A. and Huang, T.H. (2003) Oligonucleotide-based microarray for DNA methylation analysis: principles and applications. J. Cell. Biochem., 88, 138-143.
    • (2003) J. Cell. Biochem. , vol.88 , pp. 138-143
    • Shi, H.1    Maier, S.2    Nimmrich, I.3    Yan, P.S.4    Caldwell, C.W.5    Olek, A.6    Huang, T.H.7
  • 59
    • 0035577862 scopus 로고    scopus 로고
    • Dissecting complex epigenetic alterations in breast cancer using CpG island microarrays
    • Yan, P.S., Chen, C.M., Shi, H., Rahmatpanah, F., Wei, S.H., Caldwell, C.W. and Huang, T.H. (2001) Dissecting complex epigenetic alterations in breast cancer using CpG island microarrays. Cancer Res., 61, 8375-8380.
    • (2001) Cancer Res. , vol.61 , pp. 8375-8380
    • Yan, P.S.1    Chen, C.M.2    Shi, H.3    Rahmatpanah, F.4    Wei, S.H.5    Caldwell, C.W.6    Huang, T.H.7
  • 60
    • 0037351987 scopus 로고    scopus 로고
    • Large-scale variation among human and great ape genomes determined by array comparative genomic hybridization
    • Locke, D.P., Segraves, R., Carbone, L., Archidiacono, N., Albertson, D.G., Pinkel, D. and Eichler, E.E. (2003) Large-scale variation among human and great ape genomes determined by array comparative genomic hybridization. Genome Res., 13, 347-357.
    • (2003) Genome Res. , vol.13 , pp. 347-357
    • Locke, D.P.1    Segraves, R.2    Carbone, L.3    Archidiacono, N.4    Albertson, D.G.5    Pinkel, D.6    Eichler, E.E.7
  • 62
    • 0037435010 scopus 로고    scopus 로고
    • Identification of novel pRb binding sites using CpG microarrays suggests that E2F recruits pRb to specific genomic sites during S phase
    • Wells, J., Yan, P.S., Cechvala, M., Huang, T. and Farnham, P.J. (2003) Identification of novel pRb binding sites using CpG microarrays suggests that E2F recruits pRb to specific genomic sites during S phase. Oncogene, 22, 1445-1460.
    • (2003) Oncogene , vol.22 , pp. 1445-1460
    • Wells, J.1    Yan, P.S.2    Cechvala, M.3    Huang, T.4    Farnham, P.J.5
  • 63
    • 0036270889 scopus 로고    scopus 로고
    • ChIP-chip: A genomic approach for identifying transcription factor binding sites
    • Horak, C.E. and Snyder, M. (2002) ChIP-chip: a genomic approach for identifying transcription factor binding sites. Meth. Enzymol., 350, 469-483.
    • (2002) Meth. Enzymol. , vol.350 , pp. 469-483
    • Horak, C.E.1    Snyder, M.2
  • 65
    • 0035945567 scopus 로고    scopus 로고
    • Genomic binding sites of the yeast cell-cycle transcription factors SBF and MBF
    • Iyer, V.R., Horak, C.E., Scafe, C.S., Botstein, D., Snyder, M. and Brown, P.O. (2001) Genomic binding sites of the yeast cell-cycle transcription factors SBF and MBF. Nature, 409, 533-538.
    • (2001) Nature , vol.409 , pp. 533-538
    • Iyer, V.R.1    Horak, C.E.2    Scafe, C.S.3    Botstein, D.4    Snyder, M.5    Brown, P.O.6


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