Species-specific positive selection of the male-specific lethal complex that participates in dosage compensation in Drosophila

Proceedings of the National Academy of Sciences of the United States of America

Volumn 104, Issue 39, 2007, Pages 15412-15417

  Rodriguez, Monica A ^a,c   Vermaak, Danielle ^a   Bayes, Joshua J ^a,b   Malik, Harmit S ^a  

^a Fred Hutchinson Cancer Research Center   (United States)

^b UNIVERSITY OF WASHINGTON   (United States)

^c STANFORD UNIVERSITY   (United States)

Author keywords

Genetic conflict; McDonald Kreitman test; Retrotransposons; Spiroplasmal; X chromosome

Indexed keywords

GENE PRODUCT; MALE SPECIFIC LETHAL 1 PROTEIN; MALE SPECIFIC LETHAL 2 PROTEIN; UNCLASSIFIED DRUG;

ANEUPLOIDY; ARTICLE; DROSOPHILA; DROSOPHILA MELANOGASTER; DROSOPHILA SIMULANS; EVOLUTION; GENE DOSAGE; GENE EXPRESSION REGULATION; GENETIC POLYMORPHISM; GENETIC SELECTION; MCDONALD KREITMAN TEST; MUTATIONAL ANALYSIS; NONHUMAN; NUCLEOTIDE SEQUENCE; POPULATION GENETICS; PRIORITY JOURNAL; PROTEIN DNA BINDING; RETROPOSON; SPECIES DIFFERENCE; STATISTICS; X CHROMOSOME;

ANIMALS; CHROMATIN IMMUNOPRECIPITATION; CROSSES, GENETIC; DROSOPHILA MELANOGASTER; EVOLUTION, MOLECULAR; FEMALE; GENE DOSAGE; GENES, LETHAL; MALE; MODELS, GENETIC; MOLECULAR SEQUENCE DATA; POLYMORPHISM, GENETIC; RNA, UNTRANSLATED; SPECIES SPECIFICITY; X CHROMOSOME;

DROSOPHILA MELANOGASTER; DROSOPHILA SIMULANS;

EID: 34848892755     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.0707445104     Document Type: Article

References (64)

1. Lindsley DL, Sandler L, Baker BS, Carpenter AT, Denell RE, Hall JC, Jacobs PA, Miklos GL, Davis BK, Gethmann RC, et al. (1972) Genetics 71:157-184.
2. Birchler JA, Yao H, Chudalayandi S (2007) Biochim Biophys Acta 1769:422-428.
3. Gupta V, Parisi M, Sturgill D, Nuttall R, Doctolero M, Dudko OK, Malley JD, Eastman PS, Oliver B (2006) J Biol 5:3.
4. Nguyen DK, Disteche CM (2006) Nat Genet 38:47-53.
5. Straub T, Becker PB (2007) Nat Rev Genet 8:47-57.
6. Hamada FN, Park PJ, Gordadze PR, Kuroda MI (2005) Genes Dev 19:2289-2294.
7. Straub T, Gilfillan GD, Maier VK, Becker PB (2005) Genes Dev 19:2284-2288.
8. Hilfiker A, Hilfiker-Kleiner D, Pannuti A, Lucchesi JC (1997) EMBO J 16:2054-2060.
9. Bone JR, Lavender J, Richman R, Palmer MJ, Turner BM, Kuroda MI (1994) Genes Dev 8:96-104.
10. Akhtar A, Becker PB (2000) Mol Cell 5:367-375.
11. Alekseyenko AA, Larschan E, Lai WR, Park PJ, Kuroda MI (2006) Genes Dev 20:848-857.
12. Gilfillan GD, Straub T, de Wit E, Greil F, Lamm R, van Steensel B, Becker PB (2006) Genes Dev 20:858-870.
13. Schubeler D (2006) Genes Dev 20:749-753.
14. Mito Y, Henikoff JG, Henikoff S (2005) Nat Genet 37:1090-1097.
15. Pal-Bhadra P, Bhadra U, Kundu J, Birchler JA (2005) Genetics 169:2061-2074.
16. Kelley RL, Meller VH, Gordadze PR, Roman G, Davis RL, Kuroda MI (1999) Cell 98:513-522.
17. Meller VH, Gordadze PR, Park Y, Chu X, Stuckenholz C, Kelley RL, Kuroda MI (2000) Curr Biol 10:136-143.
18. Legube G, McWeeney SK, Lercher MJ, Akhtar A (2006) Genes Dev 20:871-883.
19. Dahlsveen IK, Gilfillan GD, Shelest VI, Lamm R, Becker PB (2006) PLoS Genet 2:e5.
20. Stenberg P, Pettersson F, Saura AO, Berglund A, Larsson J (2005) BMC Bioinformatics 6:158.
21. Gilfillan GD, König C, Dahlsveen IK, Prakoura N, Straub T, Lamm R, Fauth T, Becker PB (2007) Nucleic Acids Res 35:3561-3572
22. Fagegaltier D, Baker BS (2004) PLoS Biol 2:e341.
23. Oh H, Bone JR, Kuroda MI (2004) Curr Biol 14:481-487.
24. Demakova OV, Kotlikova IV, Gordadze PR, Alekseyenko AA, Kuroda MI, Zhimulev IF (2003) Chromosoma 112:103-115.
25. Tajitna F (1989) Genetics 123:585-595.
26. Fu YX, Li WH (1993) Genetics 133:693-709.
27. Hudson RR, Kreitman M, Aguade M (1987) Genetics 116:153-159.
28. McDonald JH, Kreitman M (1991) Nature 351:652-654.
29. Gu W, Szauter P, Lucchesi JC (1998) Dev Genet 22:56-64.
30. Lyman LM, Copps K, Rastelli L, Kelley RL, Kuroda MI (1997) Genetics 147:1743-1753.
31. Palmer MJ, Richman R, Richter L, Kuroda MI (1994) Genes Dev 8:698-706.
32. Li F, Parry DA, Scott MJ (2005) Mol Cell Biol 25:8913-8924.
33. Scott MJ, Pan LL, Cleland SB, Knox AL, Heinrich J (2000) EMBO J 19:144-155.
34. Copps K, Richman R, Lyman LM, Chang KA, Rampersad-Ammons J, Kuroda MI (1998) EMBO J 17:5409-5417.
35. Veneti Z, Bentley JK, Koana T, Braig HR, Hurst GD (2005) Science 307:1461-1463.
36. Lyon MF (2000) Proc Natl Acad Sci USA 97:6248-6249.
37. McDonald JF, Matzke MA, Matzke AJ (2005) Cytogenet Genome Res 110:242-249.
38. Birchler JA, Veitia RA (2007) Plant Cell 19:395-402.
39. Malik HS, Bayes JJ (2006) Biochem Soc Trans 34:569-573.
40. Presgraves DC, Balagopalan L, Abmayr SM, Orr HA (2003) Nature 423:715-719.
41. Brideau NJ, Flores HA, Wang J, Maheshwari S, Wang X, Barbash DA (2006) Science 314:1292-1295.
42. Barbash DA, Siino DF, Tarone AM, Roote J (2003) Proc Natl Acad Sci USA 100:5302-5307.
43. Sawamura K, Watanabe TK, Yamamoto MT (1993) Genetica 88:175-185.
44. Pal-Bhadra M, Bhadra U, Birchler JA (2006) Genetics 174:1151-1159.
45. Lakhotia SC, Mishra A, Sinha P (1981) Chromosoma 82:229-236.
46. Spierer A, Seum C, Delattre M, Spierer P (2005) J Cell Sci 118:5047-5057.
47. de Wit E, Greil F, van Steensel B (2005) Genome Res 15:1265-1273.
48. Corona DF, Clapier CR, Becker PB, Tamkun JW (2002) EMBO Rep 3:242-247.
49. Liu LP, Ni JQ, Shi YD, Oakeley EJ, Sun FL (2005) Nat Genet 37:1361-1366.
50. Mendjan S, Taipale M, Kind J, Holz H, Gebhardt P, Schelder M, Vermeulen M, Buscaino A, Duncan K, Mueller J, et al. (2006) Mol Cell 21:811-823.
51. Birchler JA, Riddle NC, Auger DL, Veitia RA (2005) Trends Genet 21:219-226.
52. Ranz JM, Namgyal K, Gibson G, Hartl DL (2004) Genome Res 14:373-379.
53. Barbash DA, Lorigan JG (2007) J Exp Zool 308:74-84.
54. Forsdyke DR (1995) J Theor Biol 172:335-345.
55. Orr HA (1989) Genetics 122:891-894.
56. Coyne JA, Orr HA (2004) Speciation (Sinauer Associates, Sunderland, MA).
57. Malik HS, Henikoff S (2001) Genetics 157:1293-1298.
58. Wiggins BL, Malik HS (2007) Fly 1:155-163.
59. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) Nucleic Acids Res 25:4876-4882.
60. Rozas J, Sanchez-DelBarrio JC, Messeguer X, Rozas R (2003) Bioinformatics 19:2496-2497.
61. Nielsen PR, Nietlispach D, Buscaino A, Warner RJ, Akhtar A, Murzin AG, Murzina NV, Laue ED (2005) J Biol Chem 280:32326-32331.
62. Morales V, Regnard C, Izzo A, Vetter I, Becker PB (2005) Mol Cell Biol 25:5947-5954.
63. Smith ER, Pannuti A, Gu W, Steurnagel A, Cook RG, Allis CD, Lucchesi JC (2000) Mol Cell Biol 20:312-318.
64. Lee CG, Chang KA, Kuroda MI, Hurwitz J (1997) EMBO J 16:2671-2681.