Biological consequences of dosage dependent gene regulatory systems

Biochimica et Biophysica Acta - Gene Structure and Expression

Volumn 1769, Issue 5-6, 2007, Pages 422-428

  Birchler, James A ^a   Yao, Hong ^a   Chudalayandi, Siva ^a  

^a UNIVERSITY OF MISSOURI   (United States)

Author keywords

Aneuploidy; Balance; Dosage compensation; Haploinsufficiency; Heterosis; Hybrid incompatibility; Ploidy; QTL; Regulatory genes

Indexed keywords

ANEUPLOIDY; CAENORHABDITIS ELEGANS; CHROMATIN; DROSOPHILA; EVOLUTION; GENE DOSAGE; GENE EXPRESSION REGULATION; HETEROSIS; HETEROZYGOSITY; HYBRID; MAIZE; NONHUMAN; PHENOTYPE; PLOIDY; PRIORITY JOURNAL; QUANTITATIVE TRAIT LOCUS; REGULATOR GENE; REVIEW; SPECIES DIFFERENTIATION;

ANEUPLOIDY; ANIMALS; DIPLOIDY; DOSAGE COMPENSATION, GENETIC; DROSOPHILA; EVOLUTION; GENE DOSAGE; GENE EXPRESSION REGULATION; HYBRID VIGOR; MODELS, GENETIC; PHENOTYPE; PLANTS; PLOIDIES; QUANTITATIVE TRAIT LOCI;

EID: 34249801481     PISSN: 01674781     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bbaexp.2006.12.002     Document Type: Review

References (44)

1. Veitia R.A. Exploring the etiology of haploinsufficiency. BioEssays 24 (2002) 175-184
2. Blakeslee A.F., Belling J., and Farnham M.E. Chromosomal duplication and Mendelian phenomena in Datura mutants. Science 52 (1920) 388-390
3. Goldschmidt R.B. Untersuchngen uber Inter-sexualitat. Zeit. Abst. Vererb. 23 (1920) 1-199
4. Bridges C.B. Sex in relation to chromosomes and genes. Am. Nat. 59 (1925) 127-137
5. Blakeslee A.F. New Jimson weeds from old chromosomes. J. Heredity 25 (1934) 80-108
6. Satina S., Blakeslee A.F., and Avery A.G. Balanced and unbalanced haploids in Datura. J. Heredity 28 (1937) 192-202
7. Birchler J.A., Bhadra U., Pal-Bhadra M., and Auger D.L. Dosage dependent gene regulation in higher eukaryotes: implications for dosage compensation, aneuploid syndromes and quantitative traits. Dev. Biol. 234 (2001) 275-288
8. Blanc G., and Wolfe K.H. Functional divergence of duplicated genes formed by polyploidy during Arabidopsis evolution. Plant Cell 16 (2004) 1679-1691
9. Maere S., DeBodt S., Raes J., Casneuf T., Van Montagu M., Kuiper M., and Van de Peer Y. Modeling gene and genome duplications in eukaryotes. Proc. Natl. Acad. Sci. U. S. A. 102 (2005) 5454-5459
10. Chapman B.A., Bowers J.E., Feltus F.A., and Paterson A.H. Buffering of crucial functions by paleologous duplicated genes may contribute cyclicality to angiosperm genome duplication. Proc. Natl. Acad. Sci. U. S. A. 103 (2006) 2730-2735
11. Birchler J.A. A study of enzyme activities in a dosage series of the long arm of chromosome one in maize. Genetics 92 (1979) 1211-1229
12. Birchler J.A., and Newton K.J. Modulation of protein levels in chromosomal dosage series of maize: the biochemical basis of aneuploid syndromes. Genetics 99 (1981) 247-266
13. Birchler J.A. The genetic basis of dosage compensation of alcohol dehydrogenase-1 in maize. Genetics 97 (1981) 625-637
14. Devlin R.H., Holm D.G., and Grigliatti T.A. Autosomal dosage compensation in Drosophila melanogaster strains trisomic for the left arm of chromosome 2. Proc. Natl. Acad. Sci. U. S. A. 79 (1982) 1200-1204
15. Birchler J.A., Hiebert J.C., and Paigen K. Analysis of autosomal dosage compensation involving the Alcohol dehydrogenase locus in Drosophila melanogaster. Genetics 124 (1990) 677-686
16. Birchler J.A., Hiebert J.C., and Krietzman M. Gene expression in adult metafemales of Drosophila melanogaster. Genetics 122 (1989) 869-879
17. Birchler J.A. Expression of cis-regulatory mutants of the white locus in metafemales of Drosophila melanogaster. Genet. Res. 59 (1992) 11-18
18. Birchler J.A., Fernandez H., and Kavi H. Commonalities in compensation. BioEssays 28 (2006) 565-568
19. Guo M., and Birchler J.A. Trans-acting dosage effects on the expression of model gene systems in maize aneuploids. Science 266 (1994) 1999-2002
20. Guo M., Davis D., and Birchler J.A. Dosage effects on gene expression in a maize ploidy series. Genetics 142 (1996) 1349-1355
21. Rabinow L., Nguyen-Huynh A.T., and Birchler J.A. A trans-acting regulatory gene that inversely affects the expression of the white, brown and scarlet loci in Drosophila melanogaster. Genetics 129 (1991) 463-480
22. Papp B., Pal C., and Hurst L.D. Dosage sensitivity and the evolution of gene families in yeast. Nature 424 (2003) 194-197
23. Kondrashov F.A., and Koonin E.V. A common framework for understanding the origin of genetic dominance and evolutionary fates of gene duplications. Trends Genet. 20 (2004) 287-290
24. Tanksley S.D. Mapping polygenes. Annu. Rev. Genet. 27 (1993) 205-233
25. Birchler J.A., Riddle N.C., Auger D.L., and Veitia R.A. Dosage balance in gene regulation: biological implications. Trends Genet. 21 (2005) 219-226
26. Bowers J.E., Chapman B.A., Rong J., and Paterson A.H. Unraveling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events. Nature 422 (2003) 433-438
27. Simillion C., Vandepoele K., Montagu M.C., Zabeau M., and Van de Peer Y. The hidden duplication past of Arabidopsis thaliana. Proc. Natl. Acad. Sci. U. S. A. 99 (2002) 13627-13632
28. Freeling M., and Thomas B.C. Gene-balanced duplications, like tetraploid, provide predictable drive to increase morphological complexity. Genome Res. 16 (2006) 805-814
29. Birchler J.A. Dosage analysis of maize endosperm development. Annu. Rev. Genet. 27 (1993) 181-204
30. Davis J.C., and Petrov D.A. Do disparate mechanisms of duplication add similar genes to the genome?. Trends Genet. 21 (2005) 548-551
31. Lynch M., and Conery J.S. The evolutionary fate and consequences of duplicate genes. Science 290 (2000) 1151-1155
32. Birchler J.A., Auger D.L., and Riddle N.C. In search of a molecular basis of heterosis. Plant Cell 15 (2003) 2236-2239
33. Semel Y., Nissenbaum J., Menda N., Zinder M., Krieger U., Issman N., Pleban T., Lippman Z., Gur A., and Zamir D. Overdominant QTL for yield and fitness in tomato. Proc. Natl. Acad. Sci. U. S. A. 103 (2006) 12981-12986
34. Redei G.P. Single locus heterosis. Z. Vererb.lehre 93 (1962) 164-170
35. Shpak E.D., Berthiaume C.T., Hill E.J., and Torii K.U. Synergistic interaction of three ERECTA-family receptor-like kinases controls Arabidopsis organ growth and flower development by promoting cell proliferation. Development 131 (2004) 1491-1501
36. Kim G.-T., Shoda K., Tsuge T., Cho K.-H., Uchimiya H., Yokoyama R., Nishitani K., and Tsukaya H. The ANGUSTIFOLIA gene of Arabidopsis, a plant CtBP gene, regulates leaf-cell expansion, the arrangement of cortical microtubules in lead cells and expression of a gene involved in cell-wall formation. EMBO J. 21 (2002) 1267-1279
37. Dobzhansky T. Genetics and the Origin of Species (1937), Columbia Univ. Press, New York
38. Muller H.J. Isolating mechanisms, evolution and temperature. Biol. Symp. 6 (1942) 71-125
39. Orr H.A., and Turelli M. The evolution of postzygotic isolation: accumulating Dobzhansky-Muller incompatibilities. Evol. Int. J. Org Evol. 55 (2002) 1085-1094
40. Laurie C.C., True J.R., Liu J., and Mercer J.M. An introgression analysis of quantitative trait loci that contribute to a morphological difference between Drosophila simulans and D. mauritiana. Genetics 145 (1997) 339-348
41. Peres D.E., and Wu C.-I. Further characterization of the Odysseus locus of hybrid sterility in Drosophila: one gene is not enough. Genetics 140 (1993) 201-206
42. Ting C.-T., Tsaur S.-C., Wu M.-L., and Wu C.-I. A rapidly evolving homeobox at the site of a hybrid sterility gene. Science 282 (1998) 1501-1504
43. Barbash D.A., Siino D.F., Tarone A.M., and Roote J. A rapidly evolving MYB-related protein causes species isolation in Drosophila. Proc. Natl. Acad. Sci. U. S. A. 100 (2003) 5302-5307
44. Stadler L.J. Mutations in barley induced by X-rays and radium. Science 68 (1928) 186-187