Dicer expression and localization in post-mitotic neurons

Brain Research

Volumn 1175, Issue 1, 2007, Pages 17-27

  Barbato, Christian ^a,b   Ciotti, Maria Teresa ^b   Serafino, Annalucia ^b   Calissano, Pietro ^a,b   Cogoni, Carlo ^a,c  

^a EUROPEAN BRAIN RESEARCH INSTITUTE   (Italy)

^b CNR   (Italy)

^c SAPIENZA UNIVERSITY OF ROME   (Italy)

Author keywords

Cerebellar granule; Dicer; Golgi reticulum; MicroRNA; RNA mediated gene silencing

Indexed keywords

BREFELDIN A; DICER; DOUBLE STRANDED RNA; ENDONUCLEASE; MICRORNA; RIBONUCLEASE III; RNA; SMALL INTERFERING RNA;

ANIMAL CELL; ARTICLE; BIOGENESIS; CATALYSIS; CELL MATURATION; CEREBELLUM; CONTROLLED STUDY; EMBRYO DEVELOPMENT; GENE SILENCING; GLIA; GOLGI COMPLEX; MACROGLIA; MITOSIS; NERVE CELL; NERVE CELL CULTURE; NONHUMAN; PRIORITY JOURNAL; PROTEIN EXPRESSION; PROTEIN LOCALIZATION; RAT; SIGNAL TRANSDUCTION;

ANIMALS; ANIMALS, NEWBORN; ASTROCYTES; BRAIN; CELL DIFFERENTIATION; CELLS, CULTURED; ENDOPLASMIC RETICULUM; GENE EXPRESSION REGULATION, ENZYMOLOGIC; GOLGI APPARATUS; MICRORNAS; NEURONS; RATS; RATS, WISTAR; RIBONUCLEASE III; RNA INTERFERENCE; RNA, DOUBLE-STRANDED; RNA, SMALL INTERFERING;

RATTUS;

EID: 34848821559     PISSN: 00068993     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.brainres.2007.07.088     Document Type: Article

References (46)

1. Abelson J.F., Kwan K.Y., O'Roak B.J., Baek D.Y., Stillman A.A., Morgan T.M., Mathews C.A., Pauls D.L., Rasin M.R., Gunel M., Davis N.R., Ercan-Sencicek A.G., Guez D.H., Spertus J.A., Leckman J.F., Dure IV L.S., Kurlan R., Singer H.S., Gilbert D.L., Farhi A., Louvi A., Lifton R.P., Sestan N., and State M.W. Sequence variants in SLITRK1 are associated with Tourette's syndrome. Science 310 (2005) 317-320
2. Barbato C., Corbi N., Canu N., Fanciulli M., Serafino A., Ciotti M., Libri V., Bruno T., Amadoro G., De Angelis R., Calissano P., and Passananti C. Rb binding protein Che-1 interacts with Tau in cerebellar granule neurons. Modulation during neuronal apoptosis. Mol. Cell Neurosci. 24 (2003) 1038-1050
3. Bartel D.P. MicroRNAs: genomics, biogenesis, mechanism, and function. Cell 116 (2004) 281-297
4. Bernstein E., Kim S.Y., Carmell M.A., Murchison E.P., Alcorn H., Li M.Z., Mills A.A., Elledge S.J., Anderson K.V., and Hannon G.J. Dicer is essential for mouse development. Nat. Genet. 35 (2003) 215-217
5. Bignami A., Eng L.F., Dahl D., and Uyeda C.T. Localization of the glial fibrillary acidic protein in astrocytes by immunofluorescence. Brain Res. 43 (1972) 429-435
6. Cao X., Yeo G., Muotri A.R., Kuwabara T., and Gage F.H. Noncoding RNAs in the mammalian central nervous system. Annu. Rev. Neurosci. 29 (2006) 77-103
7. Cikaluk D.E., Tahbaz N., Hendricks L.C., DiMattia G.E., Hansen D., Pilgrim D., and Hobman T.C. GERp95, a membrane-associated protein that belongs to a family of proteins involved in stem cell differentiation. Mol. Biol. Cell 10 (1999) 3357-3372
8. Chendrimada T.P., Gregory R.I., Kumaraswamy E., Norman J., Cooch N., Nishikura K., and Shiekhattar R. TRBP recruits the Dicer complex to Ago2 for microRNA processing and gene silencing. Nature 436 (2005) 740-744
9. Doutheil J., Gissel C., Oschlies U., Hossmann K.A., and Paschen W. Relation of neuronal endoplasmic reticulum calcium homeostasis to ribosomal aggregation and protein synthesis: implications for stress-induced suppression of protein synthesis. Brain Res. 775 (1997) 43-51
10. Frederikse P.H., Donnelly R., and Partyka L.M. miRNA and Dicer in the mammalian lens: expression of brain-specific miRNAs in the lens. Histochem. Cell Biol. 126 (2006) 1-8
11. Galli C., Piccini A., Ciotti M.T., Castellani L., Calissano P., Zaccheo D., and Tabaton M. Increased amyloidogenic secretion in cerebellar granule cells undergoing apoptosis. Proc. Natl. Acad. Sci. 95 (1998) 1247-1252
12. Gallo V., Ciotti MT., Aloisi F., and Levi G. Developmental features of rat cerebellar neural cells cultured in a chemically defined medium. J. Neurosci. Res. 15 (1986) 289-301
13. Giraldez A.J., Cinalli R.M., Glasner M.E., Enright A.J., Thomson J.M., Baskerville S., Hammond S.M., Bartel D.P., and Schier A.F. MicroRNAs regulate brain morphogenesis in zebrafish. Science 308 (2005) 833-838
14. Gregory R.I., Yan K.P., Amuthan G., Chendrimada T., Doratotaj B., Cooch N., and Shiekhattar R. The microprocessor complex mediates the genesis of microRNAs. Nature 432 (2004) 235-240
15. Hengst U., Cox L.J., Macosko E.J., and Jaffrey S.R. Functional and selective RNA interference in developing axons and growth cones. J. Neurosci. 26 (2006) 5727-5732
16. Horton A.C., and Ehlers M.D. Dual modes of endoplasmic reticulum-to-Golgi transport in dendrites revealed by live-cell imaging. J. Neurosci. 23 (2003) 6188-6199
17. Huettner J.E., and Baughman R. Primary culture of identified neurons from the visual cortex of postnatal rats. J. Neurosci. 10 (1986) 3044-3060
18. Kolb F.A., Zhang H., Jaronczyk K., Tahbaz N., Hobman T.C., and Filipowicz W. Human dicer: purification, properties, and interaction with PAZ PIWI domain proteins. Methods Enzymol. 392 (2005) 316-336
19. Kim J., Krichevsky A., Grad Y., Hayes G.D., Kosik K.S., Church G.M., and Ruvkun G. Identification of many microRNAs that copurify with polyribosomes in mammalian neurons. Proc. Natl. Acad. Sci. 101 (2004) 360-365
20. Krichevsky A.M., King K.S., Donahue C.P., Khrapko K., and Kosik K.S. A microRNA array reveals extensive regulation of microRNAs during brain development. RNA 10 (2003) 1274-1281
21. Krichevsky A.M., Sonntag K.C., Isacson O., and Kosik K.S. Specific microRNAs modulate embryonic stem cell-derived neurogenesis. Stem Cells 24 (2006) 857-864
22. Kosik K.S. The neuronal microRNA system. Nat. Rev., Neurosci. 7 (2006) 911-920
23. Kosik K.S., and Krichevsky A.M. The elegance of the MicroRNAs: a neuronal perspective. Neuron 47 (2005) 779-782
24. Kannellopoulou C., Muljo S.A., Kung A.L., Ganesan S., Drapkin R., Jenuwein T., Livingston D.M., and Rajewsky K. Dicer-deficient mouse embryonic stem cells are defective in differentiation and centromeric silencing. Genes Dev. 19 (2005) 489-501
25. Johnstone S.R., Levi G., Wilkin G.P., Schneider A., and Ciotti M.T. Subpopulations of rat cerebellar astrocytes in primary culture: morphology, cell surface antigens and [3H]GABA transport. Brain Res. 389 (1986) 63-75
26. Laemmli U.K. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227 (1970) 680-685
27. Levi G., Wilkin G.P., Ciotti M.T., and Johnstone S. Enrichment of differentiated, stellate astrocytes in cerebellar interneuron cultures as studied by GFAP immunofluorescence and autoradiographic uptake patterns with [3H]D-aspartate and [3H]GABA. Brain Res. 312 (1983) 227-241
28. Levi G., Aloisi F., Ciotti M.T., and Gallo V. Autoradiographic localization and depolarization-induced release of acidic amino acids differentiating cerebellar granule cells cultures. Brain Res. 290 (1984) 77-86
29. Lu Z., McLaren R.S., Winters C.A., and Ralston E. Ribosome association contributes to restricting mRNAs to the cell body of hippocampal neurons. Mol. Cell. Neurosci. 12 (1998) 363-375
30. Lugli G., Larson J., Martone M.E., Jones Y., and Smalheiser N.R. Dicer and eIF2c are enriched at postsynaptic densities in adult mouse brain and are modified by neuronal activity in a calpain-dependent manner. J. Neurochem. 94 (2005) 896-905
31. MacInnes J.W., and Luttges M.W. Interactive effects of cycloheximide and puromycin in altering brain polyribosomes and neural and behavioural responses to electroshock in mice. J. Neurochem. 21 (1973) 775-781
32. Mehler M.F., and Mattick J.S. Non-coding RNAs in the nervous system. J. Physiol. 575 (2006) 333-341
33. Murthy V. Free and membrane-bound ribosomes of rat cerebral cortex. J. Biol. Chem. 247 (1972) 1944-1957
34. Nakamura N., Rabouille C., Watson R., Nilsson T., Hui N., Slusarewicz P., Kreis T.E., and Warren G. Characterization of a cis-Golgi matrix protein, GM130. J. Cell Biol. 131 (1995) 1715-1726
35. Nakanishi S., and Okazawa M. Membrane potential-regulated Ca2+ signalling in development and maturation of mammalian cerebellar granule cells. J. Physiol. 575 (2006) 389-395
36. Nelson P.T., Hatzigeorgiou A.G., and Mourelatos Z. miRNP:mRNA association in polyribosomes in a human neuronal cell line RNA. RNA 10 (2004) 387-394
37. Nori A., Villa A., Podini P., Witcher D.R., and Volpe P. Intracellular Ca2+ stores of rat cerebellum: heterogeneity within and distinction from endoplasmic reticulum. Biochem. J. 291 (1993) 199-204
38. Pillai R.S. MicroRNA function: multiple mechanisms for a tiny RNA?. RNA 11 (2005) 1753-1761
39. Provost P., Dishart D., Doucet J., Frendewey D., Samuelsson B., and Radmark O. Ribonuclease activity and RNA binding of recombinant human Dicer. EMBO J. 21 (2002) 5864-5874
40. Rana T.M. Illuminating the silence: understanding the structure and function of small RNAs. Nat. Rev., Mol. Cell Biol. 8 (2007) 23-36
41. Schratt G.M., Tuebing F., Nigh E.A., Kane C.G., Sabatini M.E., Kiebler M., and Greenberg M.E. A brain-specific microRNA regulates dendritic spine development. Nature 439 (2006) 283-289
42. Seiser R.M., and Nicchitta C.V. The fate of membrane-bound ribosomes following the termination of protein synthesis. JBC 43 (2000) 33820-33827
43. Sempere L.F., Freemantle S., Pitha-Rowe I., Moss E., Dmitrovsky E., and Ambros V. Expression profiling of mammalian microRNAs uncovers a subset of brain-expressed microRNAs with possible roles in murine and human neuronal differentiation. Genome Biol. 5 (2004) R13
44. Smirnova L., Grafe A., Seiler A., Schumacher S., Nitsch R., and Wulczyn F.G. Regulation of miRNA expression during neural cell specification. Eur. J. Neurosci. 21 (2005) 1469-1477
45. Sturgess J.M., Mitranic M.M., and Moscarello M.A. The Golgi complex. III. The effects of puromycin on ultrastructure and glycoprotein synthesis. Chem. Biol. Interact. 11 (1975) 207-224
46. Tahbaz N., Kolb F.A., Zhang H., Jaronczyk K., Filipowicz W., and Hobman T.C. Characterization of the interactions between mammalian PAZ PIWI domain proteins and Dicer. EMBO Rep. 5 (2004) 189-194