Characterization of a commercialized SERS-active substrate and its application to the identification of intact Bacillus endospores

Applied Optics

Volumn 46, Issue 18, 2007, Pages 3878-3890

  Alexander, Troy A ^a   Le, Dianna M ^b  

^a U S ARMY RESEARCH LABORATORY   (United States)

^b UNITED STATES MILITARY ACADEMY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIOMATERIALS; CELLS; SCANNING ELECTRON MICROSCOPY; SUBSTRATES;

SURFACE-ENHANCED-RAMAN-SPECTROSCOPY (SERS); WAVELENGTH-TUNABLE MICROREFLECTANCE SPECTROMETRY;

RAMAN SPECTROSCOPY;

ALGORITHM; ARTICLE; BACILLUS; BACTERIAL SPORE; CALIBRATION; COMPUTER PROGRAM; LIGHT; METABOLISM; METHODOLOGY; MULTIVARIATE ANALYSIS; PHOTOCHEMISTRY; RAMAN SPECTROMETRY; REPRODUCIBILITY; SCANNING ELECTRON MICROSCOPY; SPECIES DIFFERENCE; SURFACE PROPERTY;

ALGORITHMS; BACILLUS; CALIBRATION; LIGHT; MICROSCOPY, ELECTRON, SCANNING; MULTIVARIATE ANALYSIS; PHOTOCHEMISTRY; REPRODUCIBILITY OF RESULTS; SOFTWARE; SPECIES SPECIFICITY; SPECTRUM ANALYSIS, RAMAN; SPORES; SPORES, BACTERIAL; SURFACE PROPERTIES;

EID: 34447623575     PISSN: 1559128X     EISSN: 15394522     Source Type: Journal    
DOI: 10.1364/AO.46.003878     Document Type: Article

References (57)

1. D. R. Walt and D. R. Franz, "Biological warfare detection," Anal. Chem. 72, 738A-746A (2000).
2. M. B. Phillips, "Bioterrorism: a brief history," Northeast Fla. Med. 56, 32-35 (2005).
3. D. W. Siegrist, "The threat of biological attack: why concern now?" Emerging Infect. Dis. 5, 505-508 (1999).
4. "A health warning on bioterrorism," Nature 406, 109 (2000).
5. J. B. Tucker, "Historical trends related to bioterrorism: an emperical analysis," Emerging Infect. Dis. 5, 498-504 (1999).
6. E. M. Eitzen and E. T. Takafuji, in Textbook of Military Medicine: Medical Aspects of Chemical and Biological Warfare, F. R. Sidell, E. T. Takafuji, and D. R. Franz, eds. (Office of The Surgeon General at TMM Publications Borden Institute, 1997), Chap. 18, pp. 415-423.
7. J. A. Jernigan, D. S. Stephens, D. A. Ashford, C. Omenaca, M. S. Topiel, M. Galbraith, M. Tapper, T. L. Fisk, S. Zaki, T. Popovic, R. F. Meyer, C. P. Quinn, S. A. Harper, S. K. Fridkin, J. J. Sejvar, C. W. Shephard, M. McConnell, J. Guarner, W. J. Sheih, J. M. Malecki, J. L. Berberding, J. M. Hughes, B. A. Perkins, and Members of the Anthrax Bioterrorism Investigation Team, "Bioterrorism-related inhalation anthrax: the first 10 cases reported in the United States," Emerging Infect. Dis. 7, 933-944 (2001).
8. J. Papaparaskevas, D. P. Houhoula, M. Papadimitriou, G. Saroglou, N. J. Legakis, and L. Zerva, "Ruling out Bacillus anthracis," Emerging Infect. Dis. 10, 732-735 (1999).
9. Centers for Disease Control and Prevention, American Society of Microbiology, Association of Public Heath Laboratories, "Basic diagnostic testing for level A laboratories for the presumptive identification of Bacillus anthracis," accessed November 2006, http://www.asm.org/ASM/ files/LEFTMARGINHEADERLIST/DOWNLOADFILENAME/0000000521/ bacillusanthracisprotocol[1].pdf.
10. Centers for Disease Control and Prevention, "Approved tests for the detection of Bacillus anthracis in the Laboratory Response Network (LRN)," accessed November 2006, http://www.bt.cdc.gov/agent/anthrax/lab- testing/approvedlrntests.asp.
11. T. G. Abshire, J. E. Brown, and J. W. Ezzell, "Production and validation of the use of gamma phage for identification of Bacillus anthracis," J. Clin. Microbiol. 43, 4780-4788 (2005).
12. The Royal Society, "Measures for controlling the threat from biological weapons," accessed November 2006, http://www.royalsoc.ac.uk/ displaypagedoc.asp?id=11409.
13. D. T. Dennis, T. V. Inglesby, D. A. Henderson, J. G. Bartlett, M. S. Ascher, E. Eitzen, A. D. Fine, A. M. Friedlander, J. Hauer, M. Layton, S. R. Lillibridge, J. E. McDade, M. T. Osterholm, T. O'Toole, G. Parker, T. M. Perl, P. K. Russel, and K. Tonat, "Tularemia as a biological weapon: medical and public heath management," J. Am. Med. Assoc. 285, 2763-2773 (2001).
14. T. V. Inglesby, T. O'Toole, D. A. Henderson, J. G. Bartlett, M. S. Ascher, E. Eitzen, A. M. Friedlander, J. Gerberding, J. Hauer, J. Hughes, J. E. McDade, M. T. Osterholm, G. Parker, T. M. Perl, P. K. Russell, and K. Tonat, "Anthrax as a biological weapon, 2002: updated recommendations for management," J. Am. Med. Assoc. 287, 2236-2252 (2002).
15. P. J. Meehan, N. E. Rosenstein, M. Gillen, R. F. Meyer, M. J. Kiefer, S. Deitchman, R. E. Besser, R. L. Ehrenberg, K. M. Edwards, and K. F. Martinez for the Centers for Disease Control and Prevention, "Responding to detection of aerosolized Bacillus anthracis by autonomous detection systems in the workplace," MMWR Morb. Mortal. Wkly. Rep. 53, 1-11 (2004).
16. B. K. De, S. L. Bragg, G. N. Sanden, K. E. Wilson, L. A. Diem, C. K. Marston, A. R. Hoffmaster, G. A. Barnett, R. S. Weyeant, T. G. Abshire, J. W. Ezzell, and T. Popovic, "Two-component direct fluorescent-antibody assay for rapid identification of Bacillus anthracis," Emerging Infect. Dis. 8, 1060-1065 (2002).
17. J. R. Ferraro and K. Nakamoto, Introductory Raman Spectroscopy (Academic, 1994), Chap. 3.
18. A. Campion and P. Kambhampati, "Surface-enhanced Raman scattering," Chem. Soc. Rev. 27, 241-250 (1998).
19. R. M. Jarvis, A. Brooker, and R. Goodacre, "Surface-enhanced Raman spectroscopy for bacterial discrimination utilizing a scanning electron microscope with a Raman spectroscopy interface," Anal. Chem. 76, 5198-5202 (2004).
20. A. Sengupta, M. L. Laucks, and E. J. Davis, "Surface-enhanced Raman spectroscopy of bacteria and pollen," Appl. Spectrosc. 59, 1016-1023 (2005).
21. M. L. Laucks, A. Sengupta, K. Junge, E. J. Davis, and B. D. Swanson, "Comparison of psychro-active arctic marine bacteria and common mesophilic bacteria using surface-enhanced Raman spectroscopy," Appl. Spectrosc. 59, 1222-1228 (2005).
22. W. R. Premasiri, D. T. Moir, M. S. Klemper, N. Krieger, G. Jones II, and L. D. Ziegler, "Characterization of the surface enhanced Raman scattering (SERS) of bacteria," J. Phys. Chem. B 109, 312-320 (2005).
23. T. A. Alexander, P. M. Pellegrino, and J. B. Gillespie, "Near-infrared surface-enhanced-Raman-scattering-mediated detection of single optically trapped bacterial spores," Appl. Spectrosc. 57, 1340-1345 (2003).
24. J. K. Daniels, T. P. Caldwell, K. A. Christesen, and G. Chumanov, "Monitoring the kinetics of Bacillus subtilis endospore germination via surface-enhanced Raman scattering spectroscopy," Anal. Chem. 78, 1724-1729 (2006).
25. 3 overlayers fabricated by atomic layer deposition yield improved anthrax biomarker detection," J. Am. Chem. Soc. 128, 10304-10309 (2006).
26. D. D. Evanoff, Jr., J. Heckel, T. P. Caldwell, K. A. Christesen, and G. Chumanov, "Monitoring DPA release from a single germinating Bacillus subtilis endospore via surface-enhanced Raman scattering microscopy," J. Am. Chem. Soc. 128, 12618-12619 (2006).
27. M. Moskovits, "Surface-enhanced spectroscopy," Rev. Mod. Phys. 57, 783-826 (1985).
28. K. Kneipp, H. Kneipp, G. Deinum, I. Itzkan, R. R. Dasari, and M. S. Feld, "Single-molecule detection of a cyanine dye in silver colloidal solution using near-infrared surface-enhanced Raman scattering," Appl. Spectrosc. 52, 175-178 (1998).
29. W. E. Doering and S. Nie, "Single-molecule and single-nanoparticle SERS: examining the roles of surface active sites and chemical enhancement," J. Phys. Chem. B 106, 311-317 (2002).
30. shell bimetallic nanoparticles," Curr. Sci. 86, 556-559 (2004).
31. R. H. Clarke, S. Londhe, and M. E. Womble, "Low-resolution Raman spectroscopy as an analytical tool for organic liquids," Spectroscopy 13, 28-35 (1998).
32. S. Christesen, B. MacIver, L. Procell, D. Sorrick, M. Carrabba, and J. Bello, "Nonintrusive analysis of chemical agent identification sets using a portable fiber-optic Raman spectrometer," Appl. Spectrosc. 53, 850-855 (1999).
33. C. K. Mann and T. J. Vickers, "Chemical analysis with a low-resolution Raman spectrometer," Appl. Spectrosc. 54, 742-746 (2000).
34. N. Nuraje, I. A. Banerjee, R. I. MacCuspie, L. Yu, and H. Matsui, "Biological bottom-up assembly of antibody nanotubes on patterned antigen arrays," J. Am. Chem. Soc. 126, 8088-8089 (2004).
35. T. Orzali, M. Casarin, G. Granozzi, M. Sambi, and A. Vittadini, "Bottom-up assembly of single-domain titania nanosheets on (1 × 2)-Pt(110)," Phys. Rev. Lett. 97, 156101 (2006).
36. G. D. Skidmore, M. Ellis, E. Parker, N. Sarkar, and R. Merkle, "Micro-assembly for top-down nanotechnology," in Proceedings of 2000 International Symposium on Micromechatronics and Human Science (2000), pp. 3-9.
37. D. Whang, S. Jin, Y. Wu, and C M. Lieber, "Large-scale hierarchical organization of nanowire arrays for integrated nanosystems," Nano. Lett. 3, 1255-1259 (2003).
38. C Vieu, F. Carcenac, A. Pepin, Y. Chen, M. Mejias, A. Lebib, L. Manin-Ferlazzo, L. Couraud, and H. Launois, "Electron beam lithography: resolution limits and applications," Appl. Surf. Sci. 164, 111-117 (2000).
39. M. Kahl, E. Voges, S. Kostrewa, C. Viets, and W. Hill, "Periodically structured metallic substrates for SERS," Sens. Actuators B 51, 285-291 (1998).
40. N. Felidj, S. L. Truong, J. Aubard, G. Levi, J. R. Krenn, A. Hohenau, A. Leitner, and F. R. Aussenegg, "Gold particle interaction in regular arrays probed by surface enhanced Raman scattering," J. Chem. Phys. 120, 7141-7146 (2004).
41. J. Grand, M. Lamy de la Chapelle, J.-L. Byeon, P.-M. Adam, A. Vial, and P. Royer, "Role of localized surface plasmons in surface-enhanced Raman scattering of shape-controlled metallic particles in regular arrays," Phys. Rev. B 72, 033407 (2005).
42. N. Felidj, J. Aubard, G. Levi, J. R. Krenn, G. Schider, A. Leitner, and F. R. Aussenegg, "Enhanced substrate-induced coupling in two-dimensional gold nanoparticle arrays," Phys. Rev. B 66, 245407 (2002).
43. T. Kalkbrenner, U. Hakanson, and V. Sandoghdar, "Tomographic plasmon spectroscopy of a single gold nanoparticle," Nano. Lett. 4, 2309-2314 (2004).
44. N. M. B. Perney, J. J. Baumberg, M. E. Zoorob, M. D. B. Charlton, S. Mahnkopf, and C M. Netti, "Tuning localized plasmons in nanostructured substrates for surface-enhanced Raman scattering," Opt. Express 14, 847-857 (2006).
45. T. Baum and D. J. Schiffrin, "Mechanistic aspects on anisotropic dissolution of materials: etching of single-crystal silicon in alkaline solutions," J. Chem. Soc. Faraday Trans. 94, 691-694 (1998).
46. M. Shikida, K. Sato, K. Tokoro, and D. Uchikawa, "Comparison of anisotropic etching properties between KOH and TMAH solutions," Twelfth IEEE International Conference on Micro Electro Mechanical Systems, MEMS 1999 (IEEE, 1999), Vol. 4, pp. 312-320.
47. J. Fruhauf and B. Hannemann, "Anisotropic multi-step etch processes of silicon," J. Micromech, Microeng. 7, 137-140 (1997).
48. C L. Haynes and R. P. Van Duyne, "Plasmon-sampled surface-enhanced Raman excitation spectroscopy," J. Phys. Chem. B 107, 7426-7433 (2003).
49. A. G. Brolo, D. E. Irish, and J. Lipkowski, "Surface-enhanced Raman spectra of pyridine and pyrazine adsorbed on a Au(210) single-crystal electrode," J. Phys. Chem. B 101, 3906-3909 (1997).
50. 2O colloids," Spectrochim. Acta Part A 53, 2495-2504 (1997).
51. S. P. Kuo, O. Tarasenko, S. Nourkbash, A. Bakhtina, and K. Levon, "Plasma effects on bacterial spores in a wet environment," New J. Phys. 8, 41-51 (2006).
52. V. G. R. Chada, E. A. Sanstad, R. Wang, and A. Driks, "Morphogenesis of Bacillus spore surfaces," J. Bacteriol. 185, 6255-6261 (2003).
53. M. Plomp, T. J. Leighton, K. E. Wheeler, and A. Malkin, "The high-resolution architectural and structural dynamics of Bacillus spores," Biophys. J. 88, 603-608 (2005).
54. H. Martens and T. Naes, Multivariate Calibration (Wiley, 1989).
55. R. Kramer, Chemometric Techniques for Quantitative Analysis (Marcel Dekker, 1998).
56. T. A. Alexander and C D. Tran, "Near-infrared spectrometric determination of di- and tripeptides synthesized by a combinatorial solid-phase method," Anal. Chem. 73, 1062-1067 (2001).
57. K. R. Beebe, R. J. Pell, and M. B. Seasholtz, Chemometrics: A practical Guide (Wiley, 1998).