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Volumn 175, Issue 3, 2007, Pages 1079-1087

Mammalian mRNA splice-isoform selection is tightly controlled

Author keywords

[No Author keywords available]

Indexed keywords

MESSENGER RNA;

EID: 34249008980     PISSN: 00166731     EISSN: 00166731     Source Type: Journal    
DOI: 10.1534/genetics.106.066183     Document Type: Article
Times cited : (17)

References (49)
  • 1
    • 33745532801 scopus 로고    scopus 로고
    • Increased cell-to-cell variation in gene expression in ageing mouse heart
    • BAHAR, R., C. H. HARTMANN, K. A. RODRIGUEZ, A. D. DENNY, R. A. BUSUTTIL et al., 2006 Increased cell-to-cell variation in gene expression in ageing mouse heart. Nature 441: 1011-1014.
    • (2006) Nature , vol.441 , pp. 1011-1014
    • BAHAR, R.1    HARTMANN, C.H.2    RODRIGUEZ, K.A.3    DENNY, A.D.4    BUSUTTIL, R.A.5
  • 2
    • 16944365351 scopus 로고    scopus 로고
    • Donor splice-site mutations in WT1 are responsible for Frasier syndrome
    • BARBAUX, S., P. NIAUDET, M. C. GUBLER, J. P. GRUNFELD, F. JAUBERT et al., 1997 Donor splice-site mutations in WT1 are responsible for Frasier syndrome. Nat. Genet. 17: 467-470.
    • (1997) Nat. Genet , vol.17 , pp. 467-470
    • BARBAUX, S.1    NIAUDET, P.2    GUBLER, M.C.3    GRUNFELD, J.P.4    JAUBERT, F.5
  • 4
    • 0034212551 scopus 로고    scopus 로고
    • Engineering stability in gene networks by autoregulation
    • BECSKEI, A., and L. SERRANO, 2000 Engineering stability in gene networks by autoregulation. Nature 405: 590-593.
    • (2000) Nature , vol.405 , pp. 590-593
    • BECSKEI, A.1    SERRANO, L.2
  • 5
    • 20044362721 scopus 로고    scopus 로고
    • Family-based association between Alzheimer's disease and variants in UBQLN1
    • BERTRAM, L., M. HILTUNEN, M. PARKINSON, M. INGELSSON, C. LANGE et al., 2005 Family-based association between Alzheimer's disease and variants in UBQLN1. N. Engl. J. Med. 352: 884-894.
    • (2005) N. Engl. J. Med , vol.352 , pp. 884-894
    • BERTRAM, L.1    HILTUNEN, M.2    PARKINSON, M.3    INGELSSON, M.4    LANGE, C.5
  • 6
    • 84908219488 scopus 로고
    • Statistical methods for assessing agreement between two methods of clinical measurement
    • BLAND, J. M., and D. G. ALTMAN, 1986 Statistical methods for assessing agreement between two methods of clinical measurement. Lancet 1: 307-310.
    • (1986) Lancet , vol.1 , pp. 307-310
    • BLAND, J.M.1    ALTMAN, D.G.2
  • 7
    • 17144376468 scopus 로고    scopus 로고
    • Transient responses and adaptation to steady state in a eukaryotic gene regulation system
    • BRAUN, E., and N. BRENNER, 2004 Transient responses and adaptation to steady state in a eukaryotic gene regulation system. Physiol. Biol. 1: 67-76.
    • (2004) Physiol. Biol , vol.1 , pp. 67-76
    • BRAUN, E.1    BRENNER, N.2
  • 8
    • 1942503942 scopus 로고    scopus 로고
    • The functions of E(Z)/EZH2-mediated methylation of lysine 27 in histone H3
    • CAO, R., and Y. ZHANG, 2004 The functions of E(Z)/EZH2-mediated methylation of lysine 27 in histone H3. Curr. Opin. Genet. Dev. 14: 155-164.
    • (2004) Curr. Opin. Genet. Dev , vol.14 , pp. 155-164
    • CAO, R.1    ZHANG, Y.2
  • 9
    • 0343920277 scopus 로고    scopus 로고
    • Abnormal blood vessel development and lethality in embryos lacking a single VEGF allele
    • CARMELIET, P., V. FERREIRA, G. BREIER, S. POLLEFEYT, L. KIECKENS et al., 1996 Abnormal blood vessel development and lethality in embryos lacking a single VEGF allele. Nature 380: 435-439.
    • (1996) Nature , vol.380 , pp. 435-439
    • CARMELIET, P.1    FERREIRA, V.2    BREIER, G.3    POLLEFEYT, S.4    KIECKENS, L.5
  • 10
    • 0034655641 scopus 로고    scopus 로고
    • Test of intron predictions reveals novel splice sites, alternatively spliced mRNAs and new introns in meiotically regulated genes of yeast
    • DAVIS, C. A., L. GRATE, M. SPINGOLA and M. ARES, JR., 2000 Test of intron predictions reveals novel splice sites, alternatively spliced mRNAs and new introns in meiotically regulated genes of yeast. Nucleic Acids Res. 28: 1700-1706.
    • (2000) Nucleic Acids Res , vol.28 , pp. 1700-1706
    • DAVIS, C.A.1    GRATE, L.2    SPINGOLA, M.3    ARES JR., M.4
  • 12
    • 0037087593 scopus 로고    scopus 로고
    • WT1 is a key regulator of podocyte function: Reduced expression levels cause crescentic glomerulonephritis and mesangial sclerosis
    • GUO, J. K., A. L. MENKE, M. C. GUBLER, A. R. CLARKE, D. HARRISON et al., 2002 WT1 is a key regulator of podocyte function: reduced expression levels cause crescentic glomerulonephritis and mesangial sclerosis. Hum. Mol. Genet. 11: 651-659.
    • (2002) Hum. Mol. Genet , vol.11 , pp. 651-659
    • GUO, J.K.1    MENKE, A.L.2    GUBLER, M.C.3    CLARKE, A.R.4    HARRISON, D.5
  • 13
    • 27744432217 scopus 로고    scopus 로고
    • Expression of the human glucocorticoid receptor splice variants a, b, and P in peripheral blood mononuclear leukocytes in healthy controls and in patients with hyper- and hypocortisolism
    • HAGENDORF, A., J. W. KOPER, F. H. DE JONG, A. O. BRINKMANN, S. W. J. LAMBERTS et al., 2005 Expression of the human glucocorticoid receptor splice variants a, b, and P in peripheral blood mononuclear leukocytes in healthy controls and in patients with hyper- and hypocortisolism. J. Clin. Endocrinol. Metab. 90: 6237-6243.
    • (2005) J. Clin. Endocrinol. Metab , vol.90 , pp. 6237-6243
    • HAGENDORF, A.1    KOPER, J.W.2    DE JONG, F.H.3    BRINKMANN, A.O.4    LAMBERTS, S.W.J.5
  • 14
    • 0035839099 scopus 로고    scopus 로고
    • Two splice variants of the Wilms' tumor 1 gene have distinct functions during sex determination and nephron formation
    • HAMMES, A., J. K. GUO, G. LUTSCH, J. R. LEHESTE, D. LANDROCK et al., 2001 Two splice variants of the Wilms' tumor 1 gene have distinct functions during sex determination and nephron formation. Cell 106: 319-329.
    • (2001) Cell , vol.106 , pp. 319-329
    • HAMMES, A.1    GUO, J.K.2    LUTSCH, G.3    LEHESTE, J.R.4    LANDROCK, D.5
  • 15
    • 0347763332 scopus 로고    scopus 로고
    • Quantitative trait loci for insulin-like growth factor-I, leptin, thyroxine, and corticosterone in genetically heterogeneous mice
    • HARPER, J. M., A. T. GALECKI, D. T. BURKE, S. L. PINKOSKY and R. A. MILLER, 2003 Quantitative trait loci for insulin-like growth factor-I, leptin, thyroxine, and corticosterone in genetically heterogeneous mice. Physiol. Genomics 15: 44-51.
    • (2003) Physiol. Genomics , vol.15 , pp. 44-51
    • HARPER, J.M.1    GALECKI, A.T.2    BURKE, D.T.3    PINKOSKY, S.L.4    MILLER, R.A.5
  • 16
    • 0035805255 scopus 로고    scopus 로고
    • Integrated genomic and proteomic analyses of a systematically perturbed metabolic network
    • IDEKER, T., V. THORSSON, J. A. RANISH, R. CHRISTMAS, J. Buhler et al., 2001 Integrated genomic and proteomic analyses of a systematically perturbed metabolic network. Science 292: 929-934.
    • (2001) Science , vol.292 , pp. 929-934
    • IDEKER, T.1    THORSSON, V.2    RANISH, J.A.3    CHRISTMAS, R.4    Buhler, J.5
  • 17
    • 0032914704 scopus 로고    scopus 로고
    • Multiple-trait quantitative trait loci analysis using a large mouse sibship
    • JACKSON, A. U., A. FORNES, A. GALECKI, R. A. MILLER and D. T. BURKE, 1999 Multiple-trait quantitative trait loci analysis using a large mouse sibship. Genetics 151: 785-789.
    • (1999) Genetics , vol.151 , pp. 785-789
    • JACKSON, A.U.1    FORNES, A.2    GALECKI, A.3    MILLER, R.A.4    BURKE, D.T.5
  • 18
    • 0037491063 scopus 로고    scopus 로고
    • Genetic polymorphisms in mouse genes regulating age-sensitive and age-stable T cell subsets in mice
    • JACKSON, A. U., A. T. GALECKI, D. T. BURKE and R. A. MILLER, 2003 Genetic polymorphisms in mouse genes regulating age-sensitive and age-stable T cell subsets in mice. Genes Immun. 4: 30-39.
    • (2003) Genes Immun , vol.4 , pp. 30-39
    • JACKSON, A.U.1    GALECKI, A.T.2    BURKE, D.T.3    MILLER, R.A.4
  • 19
    • 0347623371 scopus 로고    scopus 로고
    • Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays
    • JOHNSON, J. M., J. CASTLE, P. GARRETT- ENGELE, Z. KAN, P. M. LOERCH et al., 2003 Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays. Science 302: 2141-2144.
    • (2003) Science , vol.302 , pp. 2141-2144
    • JOHNSON, J.M.1    CASTLE, J.2    GARRETT- ENGELE, P.3    KAN, Z.4    LOERCH, P.M.5
  • 21
    • 0031922880 scopus 로고    scopus 로고
    • Frasier syndrome is caused by defective alternative splicing of WT1 leading to an altered ratio of WT1 +/-KTS splice isoforms
    • KLAMT, B., A. KOZIELL, F. POULAT, P. WIEACKER, P. SCAMBLER et al., 1998 Frasier syndrome is caused by defective alternative splicing of WT1 leading to an altered ratio of WT1 +/-KTS splice isoforms. Hum. Mol. Genet. 7: 709-714.
    • (1998) Hum. Mol. Genet , vol.7 , pp. 709-714
    • KLAMT, B.1    KOZIELL, A.2    POULAT, F.3    WIEACKER, P.4    SCAMBLER, P.5
  • 22
    • 11144357144 scopus 로고    scopus 로고
    • Characterization of a common susceptibility locus for asthma-related traits
    • LAITINEN, T., A. POLVI, P. RYDMAN, J. VENDELIN, V. PULKKINEN et al., 2004 Characterization of a common susceptibility locus for asthma-related traits. Science 304: 300-304.
    • (2004) Science , vol.304 , pp. 300-304
    • LAITINEN, T.1    POLVI, A.2    RYDMAN, P.3    VENDELIN, J.4    PULKKINEN, V.5
  • 24
    • 0034090310 scopus 로고    scopus 로고
    • Mammalian hepatocyte differentiation requires the transcription factor HNF-4alpha
    • LI, J., G. NING and S. A. DUNCAN, 2000 Mammalian hepatocyte differentiation requires the transcription factor HNF-4alpha. Genes Dev. 14: 464-474.
    • (2000) Genes Dev , vol.14 , pp. 464-474
    • LI, J.1    NING, G.2    DUNCAN, S.A.3
  • 25
    • 17044441930 scopus 로고    scopus 로고
    • Large-scale discovery and genotyping of single-nucleotide polymorphisms in the mouse
    • LINDBLAD-TOH, K., E. WINCHESTER, M. J. DALY, D. G. WANG, J. N. HIRSCHHORN et al., 2000 Large-scale discovery and genotyping of single-nucleotide polymorphisms in the mouse. Nat. Genet. 24: 381-386.
    • (2000) Nat. Genet , vol.24 , pp. 381-386
    • LINDBLAD-TOH, K.1    WINCHESTER, E.2    DALY, M.J.3    WANG, D.G.4    HIRSCHHORN, J.N.5
  • 27
    • 0033517148 scopus 로고    scopus 로고
    • Robustness of a gene regulatory circuit
    • LITTLE, J. W., D. P. SHEPLEY and D. W. WERT, 1999 Robustness of a gene regulatory circuit. EMBO J. 18: 4299-4307.
    • (1999) EMBO J , vol.18 , pp. 4299-4307
    • LITTLE, J.W.1    SHEPLEY, D.P.2    WERT, D.W.3
  • 28
    • 0036303748 scopus 로고    scopus 로고
    • Ras family genes: An interesting link between cell cycle and cancer
    • MACALUSO, M., G. RUSSO, C. CINTI, V. BAZAN, N. GEBBIA et al., 2002 Ras family genes: an interesting link between cell cycle and cancer. J. Cell. Physiol. 192: 125-130.
    • (2002) J. Cell. Physiol , vol.192 , pp. 125-130
    • MACALUSO, M.1    RUSSO, G.2    CINTI, C.3    BAZAN, V.4    GEBBIA, N.5
  • 29
    • 1342289558 scopus 로고    scopus 로고
    • Soluble VEGF isoforms are essential for establishing epiphyseal vascularization and regulating chondrocyte development and survival
    • MAES, C., I. STOCKMANS, K. MOERMANS, R. VAN LOOVEREN, N. SMETS et al., 2004 Soluble VEGF isoforms are essential for establishing epiphyseal vascularization and regulating chondrocyte development and survival. J. Clin. Invest. 113: 188-199.
    • (2004) J. Clin. Invest , vol.113 , pp. 188-199
    • MAES, C.1    STOCKMANS, I.2    MOERMANS, K.3    VAN LOOVEREN, R.4    SMETS, N.5
  • 30
    • 0037062982 scopus 로고    scopus 로고
    • Alternative pre-mRNA splicing and proteome expansion in metazoans
    • MANIATIS, T., and B. TASIC, 2002 Alternative pre-mRNA splicing and proteome expansion in metazoans. Nature 418: 236-243.
    • (2002) Nature , vol.418 , pp. 236-243
    • MANIATIS, T.1    TASIC, B.2
  • 31
    • 34249082499 scopus 로고    scopus 로고
    • Quantitative and evolutionary biology of alternative splicing: How changing the mix of alternative transcripts affects phenotypic plasticity and reaction norms
    • in press
    • MARDEN, J. H., 2006 Quantitative and evolutionary biology of alternative splicing: how changing the mix of alternative transcripts affects phenotypic plasticity and reaction norms. Heredity (in press).
    • (2006) Heredity
    • MARDEN, J.H.1
  • 32
    • 0013056730 scopus 로고    scopus 로고
    • Big mice die young: Early life body weight predicts longevity in genetically heterogeneous mice
    • MILLER, R. A., J. M. HARPER, A. T. GALECKI and D. T. BURKE, 2002 Big mice die young: early life body weight predicts longevity in genetically heterogeneous mice. Aging Cell 1: 22-29.
    • (2002) Aging Cell , vol.1 , pp. 22-29
    • MILLER, R.A.1    HARPER, J.M.2    GALECKI, A.T.3    BURKE, D.T.4
  • 33
    • 0029874986 scopus 로고    scopus 로고
    • Bcl-x(S) anatagonizes the protective effects of Bcl-x(L)
    • MINN, A. J., L. H. BOISE and C. B. THOMPSON, 1996 Bcl-x(S) anatagonizes the protective effects of Bcl-x(L). J. Biol. Chem. 271: 6306-6312.
    • (1996) J. Biol. Chem , vol.271 , pp. 6306-6312
    • MINN, A.J.1    BOISE, L.H.2    THOMPSON, C.B.3
  • 34
    • 24944585768 scopus 로고    scopus 로고
    • Macroarray analysis of coelomocyte gene expression in response to LPS in the sea urchin. Identification of unexpected immune diversity in an invertebrate
    • NAIR, S. V., H. DEL VALLE, P. S. GROSS, D. P. TERWILLIGER and L. C. SMITH, 2005 Macroarray analysis of coelomocyte gene expression in response to LPS in the sea urchin. Identification of unexpected immune diversity in an invertebrate. Physiol. Genomics 22: 33-47.
    • (2005) Physiol. Genomics , vol.22 , pp. 33-47
    • NAIR, S.V.1    DEL VALLE, H.2    GROSS, P.S.3    TERWILLIGER, D.P.4    SMITH, L.C.5
  • 35
    • 0035983272 scopus 로고    scopus 로고
    • The nature of robustness in development
    • Nijhout, H. F., 2002 The nature of robustness in development. BioEssays 24: 553-563.
    • (2002) BioEssays , vol.24 , pp. 553-563
    • Nijhout, H.F.1
  • 36
    • 19944365069 scopus 로고    scopus 로고
    • Revealing global regulatory features of mammalian alternative splicing using a quantitative microarray platform
    • PAN, Q., O. SHAI, C. MISQUITTA, W. ZHANG, A. L. SALTZMAN et al., 2004 Revealing global regulatory features of mammalian alternative splicing using a quantitative microarray platform. Mol. Cell 16: 929-941.
    • (2004) Mol. Cell , vol.16 , pp. 929-941
    • PAN, Q.1    SHAI, O.2    MISQUITTA, C.3    ZHANG, W.4    SALTZMAN, A.L.5
  • 37
    • 0032569851 scopus 로고    scopus 로고
    • Hsp90 as a capacitor for morphological evolution
    • RUTHERFORD, R. L., and S. LINDQUIST, 1998 Hsp90 as a capacitor for morphological evolution. Nature 396: 336-342.
    • (1998) Nature , vol.396 , pp. 336-342
    • RUTHERFORD, R.L.1    LINDQUIST, S.2
  • 38
    • 0016145568 scopus 로고
    • Comparison of the classical and autogenous system of regulation in inducible operons
    • SAVAGEAU, M. A., 1974 Comparison of the classical and autogenous system of regulation in inducible operons. Nature 252: 546-549.
    • (1974) Nature , vol.252 , pp. 546-549
    • SAVAGEAU, M.A.1
  • 39
    • 0034625260 scopus 로고    scopus 로고
    • Drosophila Dscam is an axon guidance receptor exhibiting extraordinary molecular diversity
    • SCHMUCKER, D., J. C. CLEMENS, H. SHU, C. A. WORBY, J. XIAO et al., 2000 Drosophila Dscam is an axon guidance receptor exhibiting extraordinary molecular diversity. Cell 101: 671-684.
    • (2000) Cell , vol.101 , pp. 671-684
    • SCHMUCKER, D.1    CLEMENS, J.C.2    SHU, H.3    WORBY, C.A.4    XIAO, J.5
  • 40
    • 19844379515 scopus 로고    scopus 로고
    • Genome-wide assembly and analysis of alternative transcripts in mouse
    • SHAROV, A. A., D. B. DUDEKULA and M. S. KO, 2005 Genome-wide assembly and analysis of alternative transcripts in mouse. Genome Res. 15: 748-754.
    • (2005) Genome Res , vol.15 , pp. 748-754
    • SHAROV, A.A.1    DUDEKULA, D.B.2    KO, M.S.3
  • 41
    • 0032850195 scopus 로고    scopus 로고
    • Modulation of transcriptional activation and coactivator interaction by a splicing variation in the F domain of nuclear receptor hepatocyte nuclear factor 4 alpha-1
    • SLADEK, F. M., M. D. RUSE, JR., L. NEPOMUCENO, S.-M. HUANG and M. R. STALLCUP, 1999 Modulation of transcriptional activation and coactivator interaction by a splicing variation in the F domain of nuclear receptor hepatocyte nuclear factor 4 alpha-1. Mol. Cell. Biol. 19: 6509-6522.
    • (1999) Mol. Cell. Biol , vol.19 , pp. 6509-6522
    • SLADEK, F.M.1    RUSE JR., M.D.2    NEPOMUCENO, L.3    HUANG, S.-M.4    STALLCUP, M.R.5
  • 43
    • 0037648405 scopus 로고    scopus 로고
    • Association of the T cell regulatory gene CTLA4 with susceptibility to autoimmune disease
    • UEDA, H., J. M. HOWSON, L. ESPOSITO, J. HEWARD, H. SNOOK et al., 2003 Association of the T cell regulatory gene CTLA4 with susceptibility to autoimmune disease. Nature 423: 506-511.
    • (2003) Nature , vol.423 , pp. 506-511
    • UEDA, H.1    HOWSON, J.M.2    ESPOSITO, L.3    HEWARD, J.4    SNOOK, H.5
  • 44
    • 0033546419 scopus 로고    scopus 로고
    • Four human Ras homologs differ in their abilities to activate Raf-1, induce transformation, and stimulate cell motility
    • VOICE, J. K., R. L. KLEMKE, A. LE and J. H. JACKSON, 1999 Four human Ras homologs differ in their abilities to activate Raf-1, induce transformation, and stimulate cell motility. J. Biol. Chem. 274: 17164-17170.
    • (1999) J. Biol. Chem , vol.274 , pp. 17164-17170
    • VOICE, J.K.1    KLEMKE, R.L.2    LE, A.3    JACKSON, J.H.4
  • 45
    • 0242607246 scopus 로고    scopus 로고
    • Quantitative trait loci for femoral size and shape in a genetically heterogeneous mouse population
    • VOLKMAN, S. K., A. T. GALECKI, D. T. BURKE, M. R. PACZA, M. R. MOALLI et al., 2003 Quantitative trait loci for femoral size and shape in a genetically heterogeneous mouse population. J. Bone Miner. Res. 18: 1497-1505.
    • (2003) J. Bone Miner. Res , vol.18 , pp. 1497-1505
    • VOLKMAN, S.K.1    GALECKI, A.T.2    BURKE, D.T.3    PACZA, M.R.4    MOALLI, M.R.5
  • 46
    • 0036731711 scopus 로고    scopus 로고
    • Computational analysis of alternative splicing using EST tissue information
    • XIE, H., W. Y. ZHU, A. WASSERMAN, V. GREBINSKIY, A. OLSON et al., 2002 Computational analysis of alternative splicing using EST tissue information. Genomics 80: 326-330.
    • (2002) Genomics , vol.80 , pp. 326-330
    • XIE, H.1    ZHU, W.Y.2    WASSERMAN, A.3    GREBINSKIY, V.4    OLSON, A.5
  • 47
    • 0036712421 scopus 로고    scopus 로고
    • Genome-wide detection of tissue-specific alternative splicing in the human transcriptome
    • XU, Q., B. MODREK and C. LEE, 2002 Genome-wide detection of tissue-specific alternative splicing in the human transcriptome. Nucleic Acids Res. 30: 3754-3766.
    • (2002) Nucleic Acids Res , vol.30 , pp. 3754-3766
    • XU, Q.1    MODREK, B.2    LEE, C.3
  • 48
    • 14944369327 scopus 로고    scopus 로고
    • An erythroid differentiation-specific splicing switch in protein 4.1R mediated by the interaction of SF2/ASF with an exonic splicing enhancer
    • YANG, G., S.-C. HUANG, J. Y. WU and E. J. BENZ, JR., 2005 An erythroid differentiation-specific splicing switch in protein 4.1R mediated by the interaction of SF2/ASF with an exonic splicing enhancer. Blood 105: 2146-2153.
    • (2005) Blood , vol.105 , pp. 2146-2153
    • YANG, G.1    HUANG, S.-C.2    WU, J.Y.3    BENZ JR., E.J.4
  • 49
    • 0036339867 scopus 로고    scopus 로고
    • Skeletal defects in VEGF120/120 mice reveal multiple roles for VEGF in skeletogenesis
    • ZELZER, E., W. MCLEAN, Y.-S. NG, N. FUKAI, A. M. REGINATO et al., 2002 Skeletal defects in VEGF120/120 mice reveal multiple roles for VEGF in skeletogenesis. Development 129: 1893-1904.
    • (2002) Development , vol.129 , pp. 1893-1904
    • ZELZER, E.1    MCLEAN, W.2    NG, Y.-S.3    FUKAI, N.4    REGINATO, A.M.5


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