메뉴 건너뛰기




Volumn 134, Issue 6, 2007, Pages 777-787

Differential gene expression analysis in antimony-unresponsive Indian kala azar (visceral leishmaniasis) clinical isolates by DNA microarray

Author keywords

Clinical isolates; Drug resistance; Flow cytometry; Leishmania; Microarray

Indexed keywords

ANTIMONY GLUCONATE; MULTIDRUG RESISTANCE PROTEIN;

EID: 34248397955     PISSN: 00311820     EISSN: 14698161     Source Type: Journal    
DOI: 10.1017/S0031182007002284     Document Type: Article
Times cited : (47)

References (44)
  • 1
    • 2342467942 scopus 로고    scopus 로고
    • Expression profiling using random genomic DNA microarrays identifies deferentially expressed genes associated with three major developmental stages of the protozoan parasite Leishmania major
    • Akopyants, N. S., Matlib, R. S., Bukanova, E. N., Smeds, M. R., Brownstein, B. H., Stormo, G. D. and Beverly, S. M. (2004). Expression profiling using random genomic DNA microarrays identifies deferentially expressed genes associated with three major developmental stages of the protozoan parasite Leishmania major. Molecular and Biochemical Parasitology 136, 71-86.
    • (2004) Molecular and Biochemical Parasitology , vol.136 , pp. 71-86
    • Akopyants, N.S.1    Matlib, R.S.2    Bukanova, E.N.3    Smeds, M.R.4    Brownstein, B.H.5    Stormo, G.D.6    Beverly, S.M.7
  • 2
    • 0026533657 scopus 로고
    • The interaction of Leishmania species with macrophages
    • Alexander, J. and Russell, D. G. (1992). The interaction of Leishmania species with macrophages. Advances in Parasitology 31, 175-254.
    • (1992) Advances in Parasitology , vol.31 , pp. 175-254
    • Alexander, J.1    Russell, D.G.2
  • 5
    • 0025945313 scopus 로고
    • Heavy metal resistance: A new role for P-glycoproteins in Leishmania
    • Callahan, H. L. and Beverley, S. M. (1991). Heavy metal resistance: a new role for P-glycoproteins in Leishmania. Journal of Biological Chemistry 266, 18427-18430.
    • (1991) Journal of Biological Chemistry , vol.266 , pp. 18427-18430
    • Callahan, H.L.1    Beverley, S.M.2
  • 6
    • 0037738513 scopus 로고    scopus 로고
    • Treatment specific changes in gene expression discriminate in vivo drug response in human leukemia cells
    • Cheok, M. H., Yang, W., Pui, C. H., Downing, J. R., Cheng, C., Naeve, C. W., Relling, M. V. and Evens, W. E. (2003). Treatment specific changes in gene expression discriminate in vivo drug response in human leukemia cells. Nature Genetics 34, 85-90.
    • (2003) Nature Genetics , vol.34 , pp. 85-90
    • Cheok, M.H.1    Yang, W.2    Pui, C.H.3    Downing, J.R.4    Cheng, C.5    Naeve, C.W.6    Relling, M.V.7    Evens, W.E.8
  • 8
    • 0023277545 scopus 로고
    • Single step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction
    • Chomezynski, P. and Sacchi, N. (1987). Single step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction. Analytical Biochemistry 162, 156-159.
    • (1987) Analytical Biochemistry , vol.162 , pp. 156-159
    • Chomezynski, P.1    Sacchi, N.2
  • 9
    • 0020527050 scopus 로고
    • Quantitation of amastigotes of Leishmania donovani in smears of splenic aspirates from patients with visceral leishmaniasis
    • Chulay, J. D. and Bryceson, A. D. M. (1983). Quantitation of amastigotes of Leishmania donovani in smears of splenic aspirates from patients with visceral leishmaniasis. Americal Journal of Tropical Medicine and Hygyiene 32, 475-479.
    • (1983) Americal Journal of Tropical Medicine and Hygyiene , vol.32 , pp. 475-479
    • Chulay, J.D.1    Bryceson, A.D.M.2
  • 10
  • 11
    • 0142258171 scopus 로고    scopus 로고
    • Leishmaniasis-current chemotherapy and recent advances in the search for novel drugs
    • Croft, S. L. and Coombs, G. H. (2003). Leishmaniasis-current chemotherapy and recent advances in the search for novel drugs. Trends in Parasitology 19, 502-508.
    • (2003) Trends in Parasitology , vol.19 , pp. 502-508
    • Croft, S.L.1    Coombs, G.H.2
  • 13
    • 0037189915 scopus 로고    scopus 로고
    • Analysis of stage specific gene expression in the bloodstream and the procyclic form of Trypanosoma brucei using a genomic DNA- microarray
    • Diehl, S., Diehl, F., El-Sayed, N. M., Clayton, C. and Hoheisel, J. D. (2002). Analysis of stage specific gene expression in the bloodstream and the procyclic form of Trypanosoma brucei using a genomic DNA- microarray. Molecular and Biochemical Parasitology 123, 115-123.
    • (2002) Molecular and Biochemical Parasitology , vol.123 , pp. 115-123
    • Diehl, S.1    Diehl, F.2    El-Sayed, N.M.3    Clayton, C.4    Hoheisel, J.D.5
  • 14
    • 21644432930 scopus 로고    scopus 로고
    • Refractoriness to the treatment of sodium stibogluconate in Indian kala-azar field isolates persists in in vitro and in vivo experimental models
    • Dube, A., Singh, N., Sundar, S. and Singh, N. (2005). Refractoriness to the treatment of sodium stibogluconate in Indian kala-azar field isolates persists in in vitro and in vivo experimental models. Parasitology Research 96, 216-223.
    • (2005) Parasitology Research , vol.96 , pp. 216-223
    • Dube, A.1    Singh, N.2    Sundar, S.3    Singh, N.4
  • 17
    • 0343306779 scopus 로고    scopus 로고
    • Kinetic analysis of calcein and calcein-acetoxymethylester efflux mediated by the multidrug resistance protein and P-glycoprotein
    • Essodaigui, M., Broxterman, H. J. and Garnier-Suillerot, A. (1998). Kinetic analysis of calcein and calcein-acetoxymethylester efflux mediated by the multidrug resistance protein and P-glycoprotein. Biochemistry 37, 2243-2250.
    • (1998) Biochemistry , vol.37 , pp. 2243-2250
    • Essodaigui, M.1    Broxterman, H.J.2    Garnier-Suillerot, A.3
  • 19
    • 0030924243 scopus 로고    scopus 로고
    • Co-amplification of the gamma - glutamylcysteine synthetase gene gsh1 and of the ABC transporter gene pgpA in arsenite - resistant Leishmania tarentole
    • Grondin, K., Haimeur, A., Mukhopadhayay, R., Rosen, B. P. and Ouellette, M. (1997). Co-amplification of the gamma - glutamylcysteine synthetase gene gsh1 and of the ABC transporter gene pgpA in arsenite - resistant Leishmania tarentole. EMBO Journal 16, 3057-3065.
    • (1997) EMBO Journal , vol.16 , pp. 3057-3065
    • Grondin, K.1    Haimeur, A.2    Mukhopadhayay, R.3    Rosen, B.P.4    Ouellette, M.5
  • 21
    • 0034732687 scopus 로고    scopus 로고
    • Amplification of the ABC transporter gene PGPA and increased trypanothione levels in potassium antimonyl tartrate Sb(III) resistant Leishmania tarentole
    • Haimeur, A., Brochu, C., Genest, P., Papadopoulou, B. and Ouellette, M. (2000). Amplification of the ABC transporter gene PGPA and increased trypanothione levels in potassium antimonyl tartrate Sb(III) resistant Leishmania tarentole. Molecular and Biochemical Parasitology 108, 131-135.
    • (2000) Molecular and Biochemical Parasitology , vol.108 , pp. 131-135
    • Haimeur, A.1    Brochu, C.2    Genest, P.3    Papadopoulou, B.4    Ouellette, M.5
  • 22
    • 33645762226 scopus 로고    scopus 로고
    • A sharper Bonferroni procedure for multiple test of significance
    • Hochberg, Y. (2002). A sharper Bonferroni procedure for multiple test of significance. Biometrika 75, 800-802.
    • (2002) Biometrika , vol.75 , pp. 800-802
    • Hochberg, Y.1
  • 25
    • 0035979259 scopus 로고    scopus 로고
    • Bootstrapping cluster analysis: Assessing the reliability of conclusions from microarray experiments
    • Kerr, M. K. and Churchill, G. A. (2001). Bootstrapping cluster analysis: assessing the reliability of conclusions from microarray experiments. Proceedings of the National Academy of Sciences, USA 98, 8961-8965.
    • (2001) Proceedings of the National Academy of Sciences, USA , vol.98 , pp. 8961-8965
    • Kerr, M.K.1    Churchill, G.A.2
  • 26
    • 34248402582 scopus 로고    scopus 로고
    • Possibility of membrane modification as a mechanism of antimony resistance in Leishmania donovani
    • in the Press
    • Kothari, H., Kumar, P., Sundar, S. and Singh, N. (2006). Possibility of membrane modification as a mechanism of antimony resistance in Leishmania donovani. Parasitology International (in the Press).
    • (2006) Parasitology International
    • Kothari, H.1    Kumar, P.2    Sundar, S.3    Singh, N.4
  • 27
    • 0034923013 scopus 로고    scopus 로고
    • On differential variability of expression ratios: Improving statistical inference about gene expression changes from microarray data
    • Newton, M. A., Kendziroski, C. M., Richmond, C. S., Blattner, F. R. and Tsui, K. W. (2001). On differential variability of expression ratios: improving statistical inference about gene expression changes from microarray data. Journal of Computational Biology 8, 37-52.
    • (2001) Journal of Computational Biology , vol.8 , pp. 37-52
    • Newton, M.A.1    Kendziroski, C.M.2    Richmond, C.S.3    Blattner, F.R.4    Tsui, K.W.5
  • 28
    • 0035228759 scopus 로고    scopus 로고
    • Analysis of strain and regional variation in gene expression in mouse brain
    • Pavlidis, P. and Noble, W. S. (2001). Analysis of strain and regional variation in gene expression in mouse brain. Genome Biology 2, r0042.1-r0042.15.
    • (2001) Genome Biology , vol.2
    • Pavlidis, P.1    Noble, W.S.2
  • 29
    • 0041767590 scopus 로고    scopus 로고
    • Leishmania donovani resistance to miltefosine involves a defective inward translocation of the drug
    • Perez-Victoria, F. J., Castanys, S. and Gamarro, F. (2003). Leishmania donovani resistance to miltefosine involves a defective inward translocation of the drug. Antimicrobial Agents and Chemotherapy 47, 2397-2403.
    • (2003) Antimicrobial Agents and Chemotherapy , vol.47 , pp. 2397-2403
    • Perez-Victoria, F.J.1    Castanys, S.2    Gamarro, F.3
  • 32
    • 0036898577 scopus 로고    scopus 로고
    • Quackenbush, J. (2002). Microarray data normalization and transformation Nature Genetics 32 (Suppl.), 496-501.
    • Quackenbush, J. (2002). Microarray data normalization and transformation Nature Genetics 32 (Suppl.), 496-501.
  • 35
    • 0013026842 scopus 로고    scopus 로고
    • Is there true Sb (V) resistance in Indian kala-azar field isolates ?
    • Singh, N. (2002). Is there true Sb (V) resistance in Indian kala-azar field isolates ? Current Science 83, 101-102.
    • (2002) Current Science , vol.83 , pp. 101-102
    • Singh, N.1
  • 36
    • 33745190490 scopus 로고    scopus 로고
    • Drug resistance mechanisms in clinical isolates of Leishmania donovani
    • Singh, N. (2006). Drug resistance mechanisms in clinical isolates of Leishmania donovani. Indian Journal of Medical Research 123, 411-422.
    • (2006) Indian Journal of Medical Research , vol.123 , pp. 411-422
    • Singh, N.1
  • 37
    • 0041941359 scopus 로고    scopus 로고
    • Novel mechanisms of drug resistance in kala azar field isolates
    • Singh, N., Singh, R. T. and Sundar, S. (2003). Novel mechanisms of drug resistance in kala azar field isolates. Journal of Infectious Diseases 188, 600-607.
    • (2003) Journal of Infectious Diseases , vol.188 , pp. 600-607
    • Singh, N.1    Singh, R.T.2    Sundar, S.3
  • 38
    • 33746351797 scopus 로고    scopus 로고
    • Visceral leishmaniasis, or kala azar (KA): High incidence of refractoriness to antimony is contributed by anthroponotic transmission via post-KA dermal leishmaniasis
    • Singh, R., Kumar, D., Ramesh, V., Negi, N. S., Singh, S. and Salotra, P. (2006). Visceral leishmaniasis, or kala azar (KA): high incidence of refractoriness to antimony is contributed by anthroponotic transmission via post-KA dermal leishmaniasis. Journal of Infectious Diseases 194, 302-306.
    • (2006) Journal of Infectious Diseases , vol.194 , pp. 302-306
    • Singh, R.1    Kumar, D.2    Ramesh, V.3    Negi, N.S.4    Singh, S.5    Salotra, P.6
  • 39
    • 0034780949 scopus 로고    scopus 로고
    • Drug resistances in Indian visceral leishmaniasis
    • Sundar, S. (2001). Drug resistances in Indian visceral leishmaniasis. Tropical Medicine and International Health 6, 849-854.
    • (2001) Tropical Medicine and International Health , vol.6 , pp. 849-854
    • Sundar, S.1
  • 40
    • 18944370727 scopus 로고    scopus 로고
    • Availability of miltefosine for the treatment of kala-azar in India
    • Sundar, S. and Murray, H. W. (2005). Availability of miltefosine for the treatment of kala-azar in India. Bulletin of the World Health Organization 83, no. 5, pp. 394-395.
    • (2005) Bulletin of the World Health Organization , vol.83 , Issue.5 , pp. 394-395
    • Sundar, S.1    Murray, H.W.2
  • 42
    • 0026532008 scopus 로고
    • Energy-dependent processes involved in reduced drug accumulation in multidrug-resistant human lung cancer cell lines without P-glycoprotein expression
    • Versantvoor, C. H. M., Broxterman, H. J., Pinedo, H. M., De Vries, E. G., Feller, N., Kuiper, C. M. and Lankelma, J. (1992). Energy-dependent processes involved in reduced drug accumulation in multidrug-resistant human lung cancer cell lines without P-glycoprotein expression. Cancer Research 52, 17-23.
    • (1992) Cancer Research , vol.52 , pp. 17-23
    • Versantvoor, C.H.M.1    Broxterman, H.J.2    Pinedo, H.M.3    De Vries, E.G.4    Feller, N.5    Kuiper, C.M.6    Lankelma, J.7
  • 44
    • 1342294092 scopus 로고    scopus 로고
    • Normalization for cDNA microarray data: A robust composite method addressing single and multiple slide systematic variation
    • Yang, Y. H., Dudoit, S., Luu, P., Lin, D. M., Peng, V., Ngai, J. and Speed, T. P. (2002). Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation. Nucleic Acids Research 30, e15.
    • (2002) Nucleic Acids Research , vol.30
    • Yang, Y.H.1    Dudoit, S.2    Luu, P.3    Lin, D.M.4    Peng, V.5    Ngai, J.6    Speed, T.P.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.