Exploring drug-induced alterations in gene expression in Mycobacterium tuberculosis by microarray hybridization

Proceedings of the National Academy of Sciences of the United States of America

Volumn 96, Issue 22, 1999, Pages 12833-12838

  Wilson, Michael ^a,c   DeRisi, Joseph ^a,d   Kristensen, Hans Henrik ^b,e   Imboden, Paul ^b,f   Rane, Sangeeta ^b   Brown, Patrick O ^a   Schoolnik, Gary K ^a,b  

^a STANFORD UNIVERSITY   (United States)

^b STANFORD UNIVERSITY SCHOOL OF MEDICINE   (United States)

^c AFFYMAX RESEARCH INSTITUTE   (United States)

^d UNIVERSITY OF CALIFORNIA   (United States)

^e NOVO NORDISK A S   (Denmark)

^f UNIVERSITY OF BERN   (Switzerland)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; BACTERIAL ENZYME; FATTY ACID SYNTHASE; ISONIAZID;

ARTICLE; BACTERIAL GENE; CONTROLLED STUDY; DNA DETERMINATION; DRUG DESIGN; DRUG MECHANISM; DRUG TARGETING; GENE FUNCTION; GENOTOXICITY; INCUBATION TIME; MYCOBACTERIUM TUBERCULOSIS; NONHUMAN; OPEN READING FRAME; PRIORITY JOURNAL; TUBERCULOSIS;

ANTITUBERCULAR AGENTS; BASE SEQUENCE; DNA PRIMERS; GENE EXPRESSION REGULATION, BACTERIAL; GENES, BACTERIAL; ISONIAZID; MYCOBACTERIUM TUBERCULOSIS; NUCLEIC ACID HYBRIDIZATION; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION;

ANIMALIA; BACTERIA (MICROORGANISMS); MYCOBACTERIUM; MYCOBACTERIUM TUBERCULOSIS;

EID: 0033607188     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.96.22.12833     Document Type: Article

References (28)

1. Cole, S. T., Brosch, R., Parkhill, J., Garnier, T., Churcher, C., Harris, D., Gordon, S. V., Eiglmeier, K., Gas, S., Barry, C. E., 3rd, et al. (1998) Nature (London) 393, 537-544.
2. W.H.O. (1997) Anti-Tuberculosis Drug Resistance in the World: The W.H.O./IUATLD Global Project on Anti-Tuberculosis Drug Resistance Surveillance (W.H.O., Geneva).
3. Pablos-Mendez, A., Raviglione, M. C., Laszlo, A., Binkin, N., Rieder, H. L., Bustreo, F., Cohn, D. L., Lambregts-van Weezenbeek, C. S., Kim, S. J., Chaulet, P. & Nunn, P. (1998) N. Engl. J. Med. 338, 1641-1649.
4. Takayama, K., Wang, L. & David, H. L. (1972) Antimicrob. Agents Chemother. 2, 29-35.
5. Banerjee, A., Dubnau, E., Quemard, A., Balasubramanian, V., Um, K. S., Wilson, T., Collins, D., de Lisle, G. & Jacobs, W. R., Jr. (1994) Science 263, 227-230.
6. Rozwarski, D. A., Grant, G. A., Barton, D. H. R., Jacobs, W. R., Jr. & Sacchettini, J. C. (1998) Science 279, 98-102.
7. Mdluli, K., Slayden, R. A., Zhu, Y., Ramaswamy, S., Pan, X., Mead, D., Crane, D. D., Musser, J. M. & Barry, C. E., 3rd (1998) Science 280, 1607-1610.
8. Mdluli, K., Sherman, D. R., Hickey, M. J., Kreiswirth, B. N., Morris, S., Stover, C. K. & Barry, C. E., 3rd (1996) J. Infect. Dis. 174, 1085-1090.
9. Takayama, K., Schnoes, H. K., Armstrong, E. L. & Boyle, R. W. (1975) J. Lipid Res. 16, 308-317.
10. Lashkari, D. A., McCusker, J. H. & Davis, R. W. (1997) Proc. Natl. Acad. Sci. USA 94, 8945-8947.
11. Schena, M., Shalon, D., Davis, R. W. & Brown, P. O. (1995) Science 270, 467-470.
12. DeRisi, J. L., Iyer, V. R. & Brown, P. O. (1997) Science 278, 680-686.
13. Kubica, G. P., Jones, W., Abbott, V. D., Beam, R. E., Kilburn, J. O. & Caper, J. O., Jr. (1966) Am. Rev. Respir. Dis. 94, 400-405.
14. Jacobs, W. R., Jr., Kalpana, G. V., Cirillo, J. D., Pascopella, L., Snapper, S. B., Udani, R. A., Jones, W., Barletta, R. G. & Bloom, B. R. (1991) Methods Enzymol. 204, 537-555.
15. Mangan, J. A., Sole, K. M., Mitchison, D. A. & Butcher, P. D. (1997) Nucleic Acids Res. 25, 675-676.
16. Aiba, H., Hanamura, A. & Yamano, H. (1991) J. Biol. Chem. 266, 1721-1727.
17. Neidhardt, F. C., ed. (1987) in Escherichia coli and Salmonella typhimurium Cellular and Molecular Biology (Am. Soc. Microbiol., Washington, DC), Vol. 1, p. 4.
18. Belisle, J. T., Vissa, V. D., Sievert, T., Takayama, K., Brennan, P. J. & Besra, G. S. (1997) Science 276, 1420-1422.
19. Garbe, T. R., Hibler, N. S. & Deretic, V. (1996) Antimicrob. Agents Chemother. 40, 1754-1756.
20. Doran, J. L., Pang, Y., Mdluli, K. E., Moran, A. J., Victor, T. C., Stokes, R. W., Mahenthiralingam, E., Kreiswirth, B. N., Butt, J. L., Baron, G. S., et al. (1997) Clin. Diagn. Lab. Immunol. 4, 23-32.
21. Paulsen, I. T., Brown, M. H. & Skurray, R. A. (1996) Microbiol. Rev. 60, 575-608.
22. Alland, D., Kramnik, I., Weisbrod, T. R., Otsubo, L., Cerny, R., Miller, L. P., Jacobs, W. R., Jr. & Bloom, B. R. (1998) Proc. Natl. Acad. Sci. USA 95, 13227-13232.
23. Odriozola, J. M., Ramos, J. A. & Bloch, K. (1977) Biochim. Biophys. Acta 488, 207-217.
24. Quemard, A., Sacchettini, J. C., Dessen, A., Vilcheze, C., Bittman, R., Jacobs, W. R., Jr. & Blanchard, J. S. (1995) Biochemistry 34, 8235-8241.
25. Magnuson, K., Jackowski, S., Rock, C. O. & Cronan, J. E., Jr. (1993) Microbiol. Rev. 57, 522-542.
26. Kolattukudy, P. E., Fernandes, N. D., Azad, A. K., Fitzmaurice, A. M. & Sirakova, T. D. (1997) Mol. Microbiol. 24, 263-270.
27. Barry, C. E. 3rd, Lee, R. E., Mdluli, K., Sampson, A. E., Schroeder, B. G., Slayden, R. A. & Yuan, Y. (1998) Prog. Lipid Res. 37, 143-179.
28. George, K. M., Yuan, Y., Sherman, D. R. & Barry, C. E. 3rd (1995) J. Biol. Chem. 270, 27292-27298.