-
1
-
-
0036200945
-
Molecular biologist's guide to proteomics
-
table of contents
-
Graves PR, Haystead TA. Molecular biologist's guide to proteomics. Microbiol Mol Biol Rev 2002;66:39-63; table of contents.
-
(2002)
Microbiol Mol Biol Rev
, vol.66
, pp. 39-63
-
-
Graves, P.R.1
Haystead, T.A.2
-
2
-
-
20644459456
-
Novel strategies for the early detection and prevention of lung cancer
-
Wardwell NR, Massion PP. Novel strategies for the early detection and prevention of lung cancer. Semin Oncol 2005;32:259-268.
-
(2005)
Semin Oncol
, vol.32
, pp. 259-268
-
-
Wardwell, N.R.1
Massion, P.P.2
-
3
-
-
0035908491
-
Phases of biomarker development for early detection of cancer
-
Sullivan Pepe M, Etzioni R, Feng Z, et al. Phases of biomarker development for early detection of cancer. J Natl Cancer Inst 2001;93:1054-1061.
-
(2001)
J Natl Cancer Inst
, vol.93
, pp. 1054-1061
-
-
Sullivan Pepe, M.1
Etzioni, R.2
Feng, Z.3
-
5
-
-
3042524939
-
Recent developments in biomarkers for the early detection of lung cancer: Perspectives based on publications 2003 to present
-
Chanin TD, Merrick DT, Franklin WA, Hirsch FR. Recent developments in biomarkers for the early detection of lung cancer: perspectives based on publications 2003 to present. Curr Opin Pulm Med 2004;10:242-247.
-
(2004)
Curr Opin Pulm Med
, vol.10
, pp. 242-247
-
-
Chanin, T.D.1
Merrick, D.T.2
Franklin, W.A.3
Hirsch, F.R.4
-
6
-
-
0035992398
-
Proteomic analysis of lung adenocarcinoma: Identification of a highly expressed set of proteins in tumors
-
Chen G, Gharib TG, Huang CC, et al. Proteomic analysis of lung adenocarcinoma: identification of a highly expressed set of proteins in tumors. Clin Cancer Res 2002;8:2298-2305.
-
(2002)
Clin Cancer Res
, vol.8
, pp. 2298-2305
-
-
Chen, G.1
Gharib, T.G.2
Huang, C.C.3
-
7
-
-
28344438939
-
Deciphering protein molecular signatures in cancer tissues to aid in diagnosis, prognosis, and therapy
-
Caprioli RM. Deciphering protein molecular signatures in cancer tissues to aid in diagnosis, prognosis, and therapy. Cancer Res 2005;65:10642-10645.
-
(2005)
Cancer Res
, vol.65
, pp. 10642-10645
-
-
Caprioli, R.M.1
-
8
-
-
0041735992
-
Proteomic patterns of tumour subsets in non-small-cell lung cancer
-
Yanagisawa K, Shyr Y, Xu BJ, et al. Proteomic patterns of tumour subsets in non-small-cell lung cancer. Lancet 2003;362:433-439.
-
(2003)
Lancet
, vol.362
, pp. 433-439
-
-
Yanagisawa, K.1
Shyr, Y.2
Xu, B.J.3
-
9
-
-
0036645099
-
Serum protein fingerprinting coupled with a pattern-matching algorithm distinguishes prostate cancer from benign prostate hyperplasia and healthy men
-
Adam BL, Qu Y, Davis JW, et al. Serum protein fingerprinting coupled with a pattern-matching algorithm distinguishes prostate cancer from benign prostate hyperplasia and healthy men. Cancer Res 2002;62:3609-3614.
-
(2002)
Cancer Res
, vol.62
, pp. 3609-3614
-
-
Adam, B.L.1
Qu, Y.2
Davis, J.W.3
-
10
-
-
0347506023
-
Serum protein MALDI profiling to distinguish upper aerodigestive tract cancer patients from control subjects
-
Sidransky D, Irizarry R, Califano JA, et al. Serum protein MALDI profiling to distinguish upper aerodigestive tract cancer patients from control subjects. J Natl Cancer Inst 2003;95:1711-1717.
-
(2003)
J Natl Cancer Inst
, vol.95
, pp. 1711-1717
-
-
Sidransky, D.1
Irizarry, R.2
Califano, J.A.3
-
11
-
-
0033994455
-
Identification of gel-separated tumor marker proteins by mass spectrometry
-
Bergman AC, Benjamin T, Alaiya A, et al. Identification of gel-separated tumor marker proteins by mass spectrometry. Electrophoresis 2000;21:679-686.
-
(2000)
Electrophoresis
, vol.21
, pp. 679-686
-
-
Bergman, A.C.1
Benjamin, T.2
Alaiya, A.3
-
12
-
-
0034095972
-
The current state of two-dimensional electrophoresis with immobilized pH gradients
-
Gorg A, Obermaier C, Boguth G, et al. The current state of two-dimensional electrophoresis with immobilized pH gradients. Electrophoresis 2000;21:1037-1053.
-
(2000)
Electrophoresis
, vol.21
, pp. 1037-1053
-
-
Gorg, A.1
Obermaier, C.2
Boguth, G.3
-
13
-
-
0031822553
-
98 Escherichia coli SWISS-2DPAGE database update
-
Tonella L, Walsh BJ, Sanchez JC, et al. '98 Escherichia coli SWISS-2DPAGE database update. Electrophoresis 1998;19:1960-1971.
-
(1998)
Electrophoresis
, vol.19
, pp. 1960-1971
-
-
Tonella, L.1
Walsh, B.J.2
Sanchez, J.C.3
-
14
-
-
0034468235
-
Molecular biology of breast cancer metastasis: Clinical implications of experimental studies on metastatic inefficiency
-
Chambers AF, Naumov GN, Vantyghem SA, Tuck AB. Molecular biology of breast cancer metastasis: clinical implications of experimental studies on metastatic inefficiency. Breast Cancer Res 2000;2:400-407.
-
(2000)
Breast Cancer Res
, vol.2
, pp. 400-407
-
-
Chambers, A.F.1
Naumov, G.N.2
Vantyghem, S.A.3
Tuck, A.B.4
-
16
-
-
0343376097
-
Difference gel electrophoresis: A single gel method for detecting changes in protein extracts
-
Unlu M, Morgan ME, Minden JS. Difference gel electrophoresis: a single gel method for detecting changes in protein extracts. Electrophoresis 1997;18:2071-2077.
-
(1997)
Electrophoresis
, vol.18
, pp. 2071-2077
-
-
Unlu, M.1
Morgan, M.E.2
Minden, J.S.3
-
17
-
-
0036463563
-
2D differential in-gel electrophoresis for the identification of esophageal scans cell cancer-specific protein markers
-
Zhou G, Li H, DeCamp D, et al. 2D differential in-gel electrophoresis for the identification of esophageal scans cell cancer-specific protein markers. Mol Cell Proteomics 2002;1:117-124.
-
(2002)
Mol Cell Proteomics
, vol.1
, pp. 117-124
-
-
Zhou, G.1
Li, H.2
DeCamp, D.3
-
18
-
-
0030904056
-
Rapid mass spectrometric identification of proteins from two-dimensional polyacrylamide gels after in gel proteolytic digestion
-
Li G, Waltham M, Anderson NL, Unsworth E, Treston A, Weinstein JN. Rapid mass spectrometric identification of proteins from two-dimensional polyacrylamide gels after in gel proteolytic digestion. Electrophoresis 1997;18:391-402.
-
(1997)
Electrophoresis
, vol.18
, pp. 391-402
-
-
Li, G.1
Waltham, M.2
Anderson, N.L.3
Unsworth, E.4
Treston, A.5
Weinstein, J.N.6
-
19
-
-
0028860382
-
Specific molecular mass detection of endogenously released neuropeptides using in vivo microdialysis/mass spectrometry
-
Emmett MR, Andren PE, Caprioli RM. Specific molecular mass detection of endogenously released neuropeptides using in vivo microdialysis/mass spectrometry. J Neurosci Methods 1995;62:141-147.
-
(1995)
J Neurosci Methods
, vol.62
, pp. 141-147
-
-
Emmett, M.R.1
Andren, P.E.2
Caprioli, R.M.3
-
20
-
-
0034480770
-
Rapidly switchable matrix-assisted laser desorption/ionization and electrospray quadrupole-time-of-flight mass spectrometry for protein identification
-
Krutchinsky AN, Zhang W, Chait BT. Rapidly switchable matrix-assisted laser desorption/ionization and electrospray quadrupole-time-of-flight mass spectrometry for protein identification. J Am Soc Mass Spectrom 2000;11:493-504.
-
(2000)
J Am Soc Mass Spectrom
, vol.11
, pp. 493-504
-
-
Krutchinsky, A.N.1
Zhang, W.2
Chait, B.T.3
-
21
-
-
0034013944
-
Recent advancements in surface-enhanced laser desorption/ionization-time of flight-mass spectrometry
-
Merchant M, Weinberger SR. Recent advancements in surface-enhanced laser desorption/ionization-time of flight-mass spectrometry. Electrophoresis 2000;21:1164-1177.
-
(2000)
Electrophoresis
, vol.21
, pp. 1164-1177
-
-
Merchant, M.1
Weinberger, S.R.2
-
22
-
-
0025186347
-
Rapid, sensitive analysis of protein mixtures by mass spectrometry
-
Beavis RC, Chait BT. Rapid, sensitive analysis of protein mixtures by mass spectrometry. Proc Natl Acad Sci USA 1990;87:6873-6877.
-
(1990)
Proc Natl Acad Sci USA
, vol.87
, pp. 6873-6877
-
-
Beavis, R.C.1
Chait, B.T.2
-
23
-
-
0036831909
-
Direct analysis of laser capture microdissected cells by MALDI mass spectrometry
-
Xu BJ, Caprioli RM, Sanders ME, Jensen RA. Direct analysis of laser capture microdissected cells by MALDI mass spectrometry. J Am Soc Mass Spectrom 2002;13:1292-1297.
-
(2002)
J Am Soc Mass Spectrom
, vol.13
, pp. 1292-1297
-
-
Xu, B.J.1
Caprioli, R.M.2
Sanders, M.E.3
Jensen, R.A.4
-
24
-
-
0242608321
-
Profiling and imaging proteins in the mouse epididymis by imaging mass spectrometry
-
Chaurand P, Fouchecourt S, DaGue BB, et al. Profiling and imaging proteins in the mouse epididymis by imaging mass spectrometry. Proteomics 2003;3:2221-2239.
-
(2003)
Proteomics
, vol.3
, pp. 2221-2239
-
-
Chaurand, P.1
Fouchecourt, S.2
DaGue, B.B.3
-
25
-
-
0035048372
-
Imaging mass spectrometry: A new technology for the analysis of protein expression in mammalian tissues
-
Stoeckli M, Chaurand P, Hallahan DE, Caprioli RM. Imaging mass spectrometry: a new technology for the analysis of protein expression in mammalian tissues. Nat Med 2001;7:493-496.
-
(2001)
Nat Med
, vol.7
, pp. 493-496
-
-
Stoeckli, M.1
Chaurand, P.2
Hallahan, D.E.3
Caprioli, R.M.4
-
26
-
-
0031568420
-
Direct analysis and identification of proteins in mixtures by LC/MS/MS and database searching at the low-femtomole level
-
McCormack AL, Schieltz DM, Goode B, et al. Direct analysis and identification of proteins in mixtures by LC/MS/MS and database searching at the low-femtomole level. Anal Chem 1997;69:767-776.
-
(1997)
Anal Chem
, vol.69
, pp. 767-776
-
-
McCormack, A.L.1
Schieltz, D.M.2
Goode, B.3
-
27
-
-
0037277179
-
Evaluation of multidimensional chromatography coupled with tandem mass spectrometry (LC/LC-MS/MS) for large-scale protein analysis: The yeast proteome
-
Peng J, Elias JE, Thoreen CC, Licklider LJ, Gygi SP. Evaluation of multidimensional chromatography coupled with tandem mass spectrometry (LC/LC-MS/MS) for large-scale protein analysis: the yeast proteome. J Proteomics Res 2003;2:43-50.
-
(2003)
J Proteomics Res
, vol.2
, pp. 43-50
-
-
Peng, J.1
Elias, J.E.2
Thoreen, C.C.3
Licklider, L.J.4
Gygi, S.P.5
-
28
-
-
0033926938
-
A brief overview of the present status of the mechanisms involved in electrospray mass spectrometry
-
Kebarle P. A brief overview of the present status of the mechanisms involved in electrospray mass spectrometry. J Mass Spectrom 2000;35:804-817.
-
(2000)
J Mass Spectrom
, vol.35
, pp. 804-817
-
-
Kebarle, P.1
-
29
-
-
0034622925
-
Printing proteins as microarrays for high-throughput function determination
-
MacBeath G, Schreiber SL. Printing proteins as microarrays for high-throughput function determination. Science 2000;289:1760-1763.
-
(2000)
Science
, vol.289
, pp. 1760-1763
-
-
MacBeath, G.1
Schreiber, S.L.2
-
30
-
-
18344385481
-
Autoantigen microarrays for multiplex characterization of autoantibody responses
-
Robinson WH, DiGennaro C, Hueber W, et al. Autoantigen microarrays for multiplex characterization of autoantibody responses. Nat Med 2002;8:295-301.
-
(2002)
Nat Med
, vol.8
, pp. 295-301
-
-
Robinson, W.H.1
DiGennaro, C.2
Hueber, W.3
-
31
-
-
0035848705
-
Reverse phase protein microarrays which capture disease progression show activation of prosurvival pathways at the cancer invasion front
-
Paweletz CP, Charboneau L, Bichsel VE, et al. Reverse phase protein microarrays which capture disease progression show activation of prosurvival pathways at the cancer invasion front. Oncogene 2001;20:1981-1989.
-
(2001)
Oncogene
, vol.20
, pp. 1981-1989
-
-
Paweletz, C.P.1
Charboneau, L.2
Bichsel, V.E.3
-
32
-
-
0242692392
-
Protein microarrays: Molecular profiling technologies for clinical specimens
-
Espina V, Mehta AI, Winters ME, et al. Protein microarrays: molecular profiling technologies for clinical specimens. Proteomics 2003;3:2091-2100.
-
(2003)
Proteomics
, vol.3
, pp. 2091-2100
-
-
Espina, V.1
Mehta, A.I.2
Winters, M.E.3
-
33
-
-
0040746269
-
A database of protein expression in lung cancer
-
Oh JM, Brichory F, Puravs E, et al. A database of protein expression in lung cancer. Proteomics 2001;1:1303-1319.
-
(2001)
Proteomics
, vol.1
, pp. 1303-1319
-
-
Oh, J.M.1
Brichory, F.2
Puravs, E.3
-
34
-
-
0036708511
-
Proteomic analysis of cytokeratin isoforms uncovers association with survival in lung adenocarcinoma
-
Gharib TG, Chen G, Wang H, et al. Proteomic analysis of cytokeratin isoforms uncovers association with survival in lung adenocarcinoma. Neoplasia 2002;4:440-448.
-
(2002)
Neoplasia
, vol.4
, pp. 440-448
-
-
Gharib, T.G.1
Chen, G.2
Wang, H.3
-
35
-
-
18544365698
-
Gene-expression profiles predict survival of patients with lung adenocarcinoma
-
Beer DG, Kardia SL, Huang CC, et al. Gene-expression profiles predict survival of patients with lung adenocarcinoma. Nat Med 2002;8:816-824.
-
(2002)
Nat Med
, vol.8
, pp. 816-824
-
-
Beer, D.G.1
Kardia, S.L.2
Huang, C.C.3
-
36
-
-
0345686721
-
Protein profiles associated with survival in lung adenocarcinoma
-
Chen G, Gharib TG, Wang H, et al. Protein profiles associated with survival in lung adenocarcinoma. Proc Natl Acad Sci USA 2003;100:13537-13542.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 13537-13542
-
-
Chen, G.1
Gharib, T.G.2
Wang, H.3
-
37
-
-
2942529235
-
Subtractive proteomic mapping of the endothelial surface in lung and solid tumours for tissue-specific therapy
-
Oh P, Li Y, Yu J, et al. Subtractive proteomic mapping of the endothelial surface in lung and solid tumours for tissue-specific therapy. Nature 2004;429:629-635.
-
(2004)
Nature
, vol.429
, pp. 629-635
-
-
Oh, P.1
Li, Y.2
Yu, J.3
-
38
-
-
1242339545
-
Proteomic analysis of lung biopsies: Differential protein expression profile between peritumoral and tumoral tissue
-
Alfonso P, Catala M, Rico-Morales ML, et al. Proteomic analysis of lung biopsies: differential protein expression profile between peritumoral and tumoral tissue. Proteomics 2004;4:442-447.
-
(2004)
Proteomics
, vol.4
, pp. 442-447
-
-
Alfonso, P.1
Catala, M.2
Rico-Morales, M.L.3
-
39
-
-
0037379862
-
Protein expression profiling identifies macrophage migration inhibitory factor and cyclophilin A as potential molecular targets in non-small cell lung cancer
-
Campa MJ, Wang MZ, Howard B, Fitzgerald MC, Patz Jr. EF. Protein expression profiling identifies macrophage migration inhibitory factor and cyclophilin A as potential molecular targets in non-small cell lung cancer. Cancer Res 2003;63:1652-1656.
-
(2003)
Cancer Res
, vol.63
, pp. 1652-1656
-
-
Campa, M.J.1
Wang, M.Z.2
Howard, B.3
Fitzgerald, M.C.4
Patz Jr., E.F.5
-
40
-
-
0141520564
-
Identification and validation of a potential lung cancer serum biomarker detected by matrix-assisted laser desorption/ionization-time of flight spectra analysis
-
Howard BA, Wang MZ, Campa MJ, Corro C, Fitzgerald MC, Patz Jr. EF. Identification and validation of a potential lung cancer serum biomarker detected by matrix-assisted laser desorption/ionization-time of flight spectra analysis. Proteomics 2003; 3:1720-1724.
-
(2003)
Proteomics
, vol.3
, pp. 1720-1724
-
-
Howard, B.A.1
Wang, M.Z.2
Campa, M.J.3
Corro, C.4
Fitzgerald, M.C.5
Patz Jr., E.F.6
-
42
-
-
0142233111
-
Weighted flexible compound covariate method for classifying microarray data
-
D Berrar Ed, New York: Kluwer Academic
-
Shyr Y, Kim K. Weighted flexible compound covariate method for classifying microarray data. In D Berrar (Ed.), A Practical Approach to Microarray Data Analysis. New York: Kluwer Academic, 2003:186-200.
-
(2003)
A Practical Approach to Microarray Data Analysis
, pp. 186-200
-
-
Shyr, Y.1
Kim, K.2
-
43
-
-
0037683738
-
Discovery of distinct protein profiles specific for lung tumors and pre-malignant lung lesions by SELDI mass spectrometry
-
Zhukov TA, Johanson RA, Cantor AB, Clark RA, Tockman MS. Discovery of distinct protein profiles specific for lung tumors and pre-malignant lung lesions by SELDI mass spectrometry. Lung Cancer 2003;40:267-279.
-
(2003)
Lung Cancer
, vol.40
, pp. 267-279
-
-
Zhukov, T.A.1
Johanson, R.A.2
Cantor, A.B.3
Clark, R.A.4
Tockman, M.S.5
-
44
-
-
3042831921
-
Activity-based probes for the proteomic profiling of metalloproteases
-
Saghatelian A, Jessani N, Joseph A, Humphrey M, Cravatt BF. Activity-based probes for the proteomic profiling of metalloproteases. Proc Natl Acad Sci USA 2004;101:10000-10005.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 10000-10005
-
-
Saghatelian, A.1
Jessani, N.2
Joseph, A.3
Humphrey, M.4
Cravatt, B.F.5
-
45
-
-
4644279779
-
Carcinoma and stromal enzyme activity profiles associated with breast tumor growth in vivo
-
Jessani N, Humphrey M, McDonald WH, et al. Carcinoma and stromal enzyme activity profiles associated with breast tumor growth in vivo. Proc Natl Acad Sci USA 2004;101:13756-13761.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 13756-13761
-
-
Jessani, N.1
Humphrey, M.2
McDonald, W.H.3
-
46
-
-
23844444818
-
Recent advances in blood-related proteomics
-
Thadikkaran L, Siegenthaler MA, Crettaz D, Queloz PA, Schneider P, Tissot JD. Recent advances in blood-related proteomics. Proteomics 2005;5:3019-3034.
-
(2005)
Proteomics
, vol.5
, pp. 3019-3034
-
-
Thadikkaran, L.1
Siegenthaler, M.A.2
Crettaz, D.3
Queloz, P.A.4
Schneider, P.5
Tissot, J.D.6
-
47
-
-
23944510681
-
Analysis of Human Proteome Organization Plasma Proteome Project (HUPO PPP) reference specimens using surface enhanced laser desorption/ionization-time of flight (SELDI-TOF) mass spectrometry: Multi-institution correlation of spectra and identification of biomarkers
-
Rai AJ, Stemmer PM, Zhang Z, et al. Analysis of Human Proteome Organization Plasma Proteome Project (HUPO PPP) reference specimens using surface enhanced laser desorption/ionization-time of flight (SELDI-TOF) mass spectrometry: multi-institution correlation of spectra and identification of biomarkers. Proteomics 2005;5:3467-3474.
-
(2005)
Proteomics
, vol.5
, pp. 3467-3474
-
-
Rai, A.J.1
Stemmer, P.M.2
Zhang, Z.3
-
48
-
-
0036324715
-
Proteomics and bioinformatics approaches for identification of serum biomarkers to detect breast cancer
-
Li J, Zhang Z, Rosenzweig J, Wang YY, Chan DW. Proteomics and bioinformatics approaches for identification of serum biomarkers to detect breast cancer. Clin Chem 2002;48:1296-1304.
-
(2002)
Clin Chem
, vol.48
, pp. 1296-1304
-
-
Li, J.1
Zhang, Z.2
Rosenzweig, J.3
Wang, Y.Y.4
Chan, D.W.5
-
49
-
-
1642557289
-
Diagnostic potential of serum proteomic patterns in prostate cancer
-
Banez LL, Prasanna P, Sun L, et al. Diagnostic potential of serum proteomic patterns in prostate cancer. J Urol 2003;170(2 Pt 1):442-446.
-
(2003)
J Urol
, vol.170
, Issue.2 PART 1
, pp. 442-446
-
-
Banez, L.L.1
Prasanna, P.2
Sun, L.3
-
50
-
-
3242816195
-
Monitoring the serological proteome: The latest modality in prostate cancer detection
-
Mobley JA, Lam YW, Lau KM, et al. Monitoring the serological proteome: the latest modality in prostate cancer detection. J Urol 2004;172:331-337.
-
(2004)
J Urol
, vol.172
, pp. 331-337
-
-
Mobley, J.A.1
Lam, Y.W.2
Lau, K.M.3
-
51
-
-
0037116832
-
Use of proteomic patterns in serum to identify ovarian cancer
-
Petricoin EF, Ardekani AM, Hitt BA, et al. Use of proteomic patterns in serum to identify ovarian cancer. Lancet 2002;359:572-577.
-
(2002)
Lancet
, vol.359
, pp. 572-577
-
-
Petricoin, E.F.1
Ardekani, A.M.2
Hitt, B.A.3
-
53
-
-
34547508675
-
Diagnosis of lung cancer from serum protein profile analysis
-
abstract
-
Yildiz P, Shyr Y, Rahman S, et al. Diagnosis of lung cancer from serum protein profile analysis. AACR Proc 45:A3335 (abstract, 2004).
-
(2004)
AACR Proc
, vol.45
-
-
Yildiz, P.1
Shyr, Y.2
Rahman, S.3
-
54
-
-
1542617944
-
Serum peptide profiling by magnetic particle-assisted, automated sample processing and MALDI-TOF mass spectrometry
-
Villanueva J, Philip J, Entenberg D, et al. Serum peptide profiling by magnetic particle-assisted, automated sample processing and MALDI-TOF mass spectrometry. Anal Chem 2004;76:1560-1570.
-
(2004)
Anal Chem
, vol.76
, pp. 1560-1570
-
-
Villanueva, J.1
Philip, J.2
Entenberg, D.3
-
55
-
-
23944434470
-
A novel four-dimensional strategy combining protein and peptide separation methods enables detection of low-abundance proteins in human plasma and serum proteomes
-
Tang HY, Ali-Khan N, Echan LA, Levenkova N, Rux JJ, Speicher DW. A novel four-dimensional strategy combining protein and peptide separation methods enables detection of low-abundance proteins in human plasma and serum proteomes. Proteomics 2005;5:3329-3342.
-
(2005)
Proteomics
, vol.5
, pp. 3329-3342
-
-
Tang, H.Y.1
Ali-Khan, N.2
Echan, L.A.3
Levenkova, N.4
Rux, J.J.5
Speicher, D.W.6
-
56
-
-
0027143878
-
Antibodies against autologous tumor cell proteins in patients with small-cell lung cancer: Association with improved survival
-
Winter SF, Sekido Y, Minna JD, et al. Antibodies against autologous tumor cell proteins in patients with small-cell lung cancer: association with improved survival. J Natl Cancer Inst 1993;85:2012-2018.
-
(1993)
J Natl Cancer Inst
, vol.85
, pp. 2012-2018
-
-
Winter, S.F.1
Sekido, Y.2
Minna, J.D.3
-
57
-
-
0035503380
-
Proteomics-based identification of protein gene product 9.5 as a tumor antigen that induces a humoral immune response in lung cancer
-
Brichory F, Beer D, Le Naour F, Giordano T, Hanash S. Proteomics-based identification of protein gene product 9.5 as a tumor antigen that induces a humoral immune response in lung cancer. Cancer Res 2001;61:7908-7912.
-
(2001)
Cancer Res
, vol.61
, pp. 7908-7912
-
-
Brichory, F.1
Beer, D.2
Le Naour, F.3
Giordano, T.4
Hanash, S.5
-
58
-
-
0035859922
-
An immune response manifested by the common occurrence of annexins I and II autoantibodies and high circulating levels of IL-6 in lung cancer
-
Brichory FM, Misek DE, Yim AM, et al. An immune response manifested by the common occurrence of annexins I and II autoantibodies and high circulating levels of IL-6 in lung cancer. Proc Natl Acad Sci USA 2001;98:9824-9829.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 9824-9829
-
-
Brichory, F.M.1
Misek, D.E.2
Yim, A.M.3
-
59
-
-
0035490199
-
Protein based microarrays: A tool for probing the proteome of cancer cells and tissues
-
Madoz-Gurpide J, Wang H, Misek DE, Brichory F, Hanash SM. Protein based microarrays: a tool for probing the proteome of cancer cells and tissues. Proteomics 2001;1:1279-1287.
-
(2001)
Proteomics
, vol.1
, pp. 1279-1287
-
-
Madoz-Gurpide, J.1
Wang, H.2
Misek, D.E.3
Brichory, F.4
Hanash, S.M.5
-
60
-
-
30444442390
-
Using protein microarray as a diagnostic assay for non-small cell lung cancer
-
Zhong L, Hidalgo GE, Stromberg AJ, Khattar NH, Jett JR, Hirschowitz EA. Using protein microarray as a diagnostic assay for non-small cell lung cancer. Am J Respir Crit Care Med 2005;172:1308-1314.
-
(2005)
Am J Respir Crit Care Med
, vol.172
, pp. 1308-1314
-
-
Zhong, L.1
Hidalgo, G.E.2
Stromberg, A.J.3
Khattar, N.H.4
Jett, J.R.5
Hirschowitz, E.A.6
-
61
-
-
1842423508
-
Identification of circulating antibodies to tumor-associated proteins for combined use as markers of non-small cell lung cancer
-
Zhong L, Peng X, Hidalgo GE, Doherty DE, Stromberg AJ, Hirschowitz EA. Identification of circulating antibodies to tumor-associated proteins for combined use as markers of non-small cell lung cancer. Proteomics 2004;4:1216-1225.
-
(2004)
Proteomics
, vol.4
, pp. 1216-1225
-
-
Zhong, L.1
Peng, X.2
Hidalgo, G.E.3
Doherty, D.E.4
Stromberg, A.J.5
Hirschowitz, E.A.6
-
62
-
-
0032549803
-
Substance P and related peptides in porcine cortex: Whole tissue and nuclear localization
-
Nilsson CL, Brodin E, Ekman R. Substance P and related peptides in porcine cortex: whole tissue and nuclear localization. J Chromatogr A 1998;800:21-27.
-
(1998)
J Chromatogr A
, vol.800
, pp. 21-27
-
-
Nilsson, C.L.1
Brodin, E.2
Ekman, R.3
-
63
-
-
0032903915
-
Identification of proteins in a human pleural exudate using two-dimensional preparative liquid-phase electrophoresis and matrix-assisted laser desorption/ionization mass spectrometry
-
Nilsson CL, Puchades M, Westman A, Blennow K, Davidsson P. Identification of proteins in a human pleural exudate using two-dimensional preparative liquid-phase electrophoresis and matrix-assisted laser desorption/ionization mass spectrometry. Electrophoresis 1999;20:860-865.
-
(1999)
Electrophoresis
, vol.20
, pp. 860-865
-
-
Nilsson, C.L.1
Puchades, M.2
Westman, A.3
Blennow, K.4
Davidsson, P.5
-
64
-
-
0031874372
-
Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry analysis of proteins in human cerebrospinal fluid
-
Westman A, Nilsson CL, Ekman R. Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry analysis of proteins in human cerebrospinal fluid. Rapid Commun Mass Spectrom 1998;12:1092-1098.
-
(1998)
Rapid Commun Mass Spectrom
, vol.12
, pp. 1092-1098
-
-
Westman, A.1
Nilsson, C.L.2
Ekman, R.3
-
65
-
-
1942446664
-
Proteomic analysis of exosomes isolated from human malignant pleural effusions
-
Bard MP, Hegmans JP, Hemmes A, et al. Proteomic analysis of exosomes isolated from human malignant pleural effusions. Am J Respir Cell Mol Biol 2004;31:114-121.
-
(2004)
Am J Respir Cell Mol Biol
, vol.31
, pp. 114-121
-
-
Bard, M.P.1
Hegmans, J.P.2
Hemmes, A.3
-
66
-
-
21044444707
-
Markers of adenocarcinoma characteristic of the site of origin: Development of a diagnostic algorithm
-
Dennis JL, Hvidsten TR, Wit EC, et al. Markers of adenocarcinoma characteristic of the site of origin: development of a diagnostic algorithm. Clin Cancer Res 2005;11:3766-3772.
-
(2005)
Clin Cancer Res
, vol.11
, pp. 3766-3772
-
-
Dennis, J.L.1
Hvidsten, T.R.2
Wit, E.C.3
-
67
-
-
26444506232
-
Asbestos exposure, pleural mesothelioma, and serum osteopontin levels
-
Pass HI, Lott D, Lonardo F. Asbestos exposure, pleural mesothelioma, and serum osteopontin levels. N Engl J Med 2005;353:1564-1573.
-
(2005)
N Engl J Med
, vol.353
, pp. 1564-1573
-
-
Pass, H.I.1
Lott, D.2
Lonardo, F.3
-
68
-
-
0344851540
-
Mesothelin-family proteins and diagnosis of mesothelioma
-
Robinson BW, Creaney J, Nowak A, et al. Mesothelin-family proteins and diagnosis of mesothelioma. Lancet 2003;362:1612-1616.
-
(2003)
Lancet
, vol.362
, pp. 1612-1616
-
-
Robinson, B.W.1
Creaney, J.2
Nowak, A.3
-
69
-
-
0035010171
-
Increased nitric oxide metabolites in exhaled breath condensate after exposure to tobacco smoke
-
Balint B, Donnelly LE, Hanazawa T, Kharitonov SA, Barnes PJ. Increased nitric oxide metabolites in exhaled breath condensate after exposure to tobacco smoke. Thorax 2001;56:456-461.
-
(2001)
Thorax
, vol.56
, pp. 456-461
-
-
Balint, B.1
Donnelly, L.E.2
Hanazawa, T.3
Kharitonov, S.A.4
Barnes, P.J.5
-
70
-
-
0035065408
-
Increased nitrosothiols in exhaled breath condensate in inflammatory airway diseases
-
Corradi M, Montuschi P, Donnelly LE, Pesci A, Kharitonov SA, Barnes PJ. Increased nitrosothiols in exhaled breath condensate in inflammatory airway diseases. Am J Respir Crit Care Med 2001;163:854-858.
-
(2001)
Am J Respir Crit Care Med
, vol.163
, pp. 854-858
-
-
Corradi, M.1
Montuschi, P.2
Donnelly, L.E.3
Pesci, A.4
Kharitonov, S.A.5
Barnes, P.J.6
-
71
-
-
0032247495
-
Exhaled breath condensate isoprostanes are elevated in patients with acute lung injury or ARDS
-
Carpenter CT, Price PV, Christman BW. Exhaled breath condensate isoprostanes are elevated in patients with acute lung injury or ARDS. Chest 1998;114:1653-1659.
-
(1998)
Chest
, vol.114
, pp. 1653-1659
-
-
Carpenter, C.T.1
Price, P.V.2
Christman, B.W.3
-
72
-
-
0027164481
-
Detection of nonvolatile macromolecules in breath: A possible diagnostic tool?
-
Scheideler L, Manke HG, Schwulera U, Inacker O, Hammerle H. Detection of nonvolatile macromolecules in breath: a possible diagnostic tool? Am Rev Respir Dis 1993;148:778-784.
-
(1993)
Am Rev Respir Dis
, vol.148
, pp. 778-784
-
-
Scheideler, L.1
Manke, H.G.2
Schwulera, U.3
Inacker, O.4
Hammerle, H.5
-
73
-
-
0035987508
-
Protein pattern of exhaled breath condensate and saliva
-
Griese M, Noss J, Bredow C. Protein pattern of exhaled breath condensate and saliva. Proteomics 2002;2:690-696.
-
(2002)
Proteomics
, vol.2
, pp. 690-696
-
-
Griese, M.1
Noss, J.2
Bredow, C.3
-
74
-
-
0034813266
-
Factors influencing breath condensate volume
-
Gessner C, Kuhn H, Pankau HJ, et al. Factors influencing breath condensate volume. Pneumologie 2001;55:414-419.
-
(2001)
Pneumologie
, vol.55
, pp. 414-419
-
-
Gessner, C.1
Kuhn, H.2
Pankau, H.J.3
-
75
-
-
24944519230
-
3p microsatellite alterations in exhaled breath condensate from patients with non-small cell lung cancer
-
Carpagnano GE, Foschino-Barbaro MP, Mule G, et al. 3p microsatellite alterations in exhaled breath condensate from patients with non-small cell lung cancer. Am J Respir Crit Care Med 2005;172:738-744.
-
(2005)
Am J Respir Crit Care Med
, vol.172
, pp. 738-744
-
-
Carpagnano, G.E.1
Foschino-Barbaro, M.P.2
Mule, G.3
-
76
-
-
3042582133
-
Endothelin-1 is increased in the breath condensate of patients with non-small-cell lung cancer
-
Carpagnano GE, Foschino-Barbaro MP, Resta O, Gramiccioni E, Carpagnano F. Endothelin-1 is increased in the breath condensate of patients with non-small-cell lung cancer. Oncology 2004;66:180-184.
-
(2004)
Oncology
, vol.66
, pp. 180-184
-
-
Carpagnano, G.E.1
Foschino-Barbaro, M.P.2
Resta, O.3
Gramiccioni, E.4
Carpagnano, F.5
-
78
-
-
0034535669
-
Use of bronchoalveolar lavage in humans: Past necessity and future imperative
-
Reynolds HY. Use of bronchoalveolar lavage in humans: past necessity and future imperative. Lung 2000;178:271-293.
-
(2000)
Lung
, vol.178
, pp. 271-293
-
-
Reynolds, H.Y.1
-
79
-
-
0018749959
-
Pulmonary alveolar proteinosis: Analysis of airway and alveolar proteins
-
Bell DY, Hook GE. Pulmonary alveolar proteinosis: analysis of airway and alveolar proteins. Am Rev Respir Dis 1979;119:979-990.
-
(1979)
Am Rev Respir Dis
, vol.119
, pp. 979-990
-
-
Bell, D.Y.1
Hook, G.E.2
-
80
-
-
0019404355
-
Plasma proteins of the bronchoalveolar surface of the lungs of smokers and nonsmokers
-
Bell DY, Haseman JA, Spock A, McLennan G, Hook GE. Plasma proteins of the bronchoalveolar surface of the lungs of smokers and nonsmokers. Am Rev Respir Dis 1981;124:72-79.
-
(1981)
Am Rev Respir Dis
, vol.124
, pp. 72-79
-
-
Bell, D.Y.1
Haseman, J.A.2
Spock, A.3
McLennan, G.4
Hook, G.E.5
-
82
-
-
0033000140
-
Human bronchoalveolar lavage fluid: Two-dimensional gel electrophoresis, amino acid microsequencing and identification of major proteins
-
Wattiez R, Hermans C, Bernard A, Lesur O, Falmagne P. Human bronchoalveolar lavage fluid: two-dimensional gel electrophoresis, amino acid microsequencing and identification of major proteins. Electrophoresis 1999;20:1634-1645.
-
(1999)
Electrophoresis
, vol.20
, pp. 1634-1645
-
-
Wattiez, R.1
Hermans, C.2
Bernard, A.3
Lesur, O.4
Falmagne, P.5
-
83
-
-
12344302300
-
Proteomics of bronchoalveolar lavage fluid
-
Wattiez R, Falmagne P. Proteomics of bronchoalveolar lavage fluid. J Chromatogr B 2005;815:169-178.
-
(2005)
J Chromatogr B
, vol.815
, pp. 169-178
-
-
Wattiez, R.1
Falmagne, P.2
-
84
-
-
0029130138
-
Two-dimensional gel electrophoresis of nasal and bronchoalveolar lavage fluids after occupational exposure
-
Lindahl M, Stahlbom B, Tagesson C. Two-dimensional gel electrophoresis of nasal and bronchoalveolar lavage fluids after occupational exposure. Electrophoresis 1995;16:1199-1204.
-
(1995)
Electrophoresis
, vol.16
, pp. 1199-1204
-
-
Lindahl, M.1
Stahlbom, B.2
Tagesson, C.3
-
85
-
-
0025082542
-
Two-dimensional electrophoresis of dog bronchoalveolar lavage fluid proteins
-
Lenz AG, Meyer B, Weber H, Maier K. Two-dimensional electrophoresis of dog bronchoalveolar lavage fluid proteins. Electrophoresis 1990;11:510-513.
-
(1990)
Electrophoresis
, vol.11
, pp. 510-513
-
-
Lenz, A.G.1
Meyer, B.2
Weber, H.3
Maier, K.4
-
86
-
-
70449626815
-
Detection and identification of human bronchoalveolar lavage proteins using narrow-range immobilized pH gradient DryStrip and the paper bridge sample application method
-
Sabounchi-Schutt F, Astrom J, Eklund A, Grunewald J, Bjellqvist B. Detection and identification of human bronchoalveolar lavage proteins using narrow-range immobilized pH gradient DryStrip and the paper bridge sample application method. Electrophoresis 2001;22:1851-1860.
-
(2001)
Electrophoresis
, vol.22
, pp. 1851-1860
-
-
Sabounchi-Schutt, F.1
Astrom, J.2
Eklund, A.3
Grunewald, J.4
Bjellqvist, B.5
-
87
-
-
1842559788
-
Reproducibility of SELDI-TOF protein patterns in serum: Comparing data sets from different experiments
-
Baggerly KA, Morris JS, Coombes KR. Reproducibility of SELDI-TOF protein patterns in serum: comparing data sets from different experiments. Bioinformatics 2004;20:777-785.
-
(2004)
Bioinformatics
, vol.20
, pp. 777-785
-
-
Baggerly, K.A.1
Morris, J.S.2
Coombes, K.R.3
-
88
-
-
13844316757
-
Signal in noise: Evaluating reported reproducibility of serum proteomic tests for ovarian cancer
-
Baggerly KA, Morris JS, Edmonson SR, Coombes KR. Signal in noise: evaluating reported reproducibility of serum proteomic tests for ovarian cancer. J Natl Cancer Inst 2005;97:307-309.
-
(2005)
J Natl Cancer Inst
, vol.97
, pp. 307-309
-
-
Baggerly, K.A.1
Morris, J.S.2
Edmonson, S.R.3
Coombes, K.R.4
-
89
-
-
0037442649
-
A method for assessing the statistical significance of mass spectrometry-based protein identifications using general scoring schemes
-
Fenyo D, Beavis RC. A method for assessing the statistical significance of mass spectrometry-based protein identifications using general scoring schemes. Anal Chem 2003;75:768-774.
-
(2003)
Anal Chem
, vol.75
, pp. 768-774
-
-
Fenyo, D.1
Beavis, R.C.2
-
90
-
-
0346364695
-
Characterization of the low molecular weight human serum proteome
-
Tirumalai RS, Chan KC, Prieto DA, Issaq HJ, Conrads TP, Veenstra TD. Characterization of the low molecular weight human serum proteome. Mol Cell Proteomics 2003;2:1096-1103.
-
(2003)
Mol Cell Proteomics
, vol.2
, pp. 1096-1103
-
-
Tirumalai, R.S.1
Chan, K.C.2
Prieto, D.A.3
Issaq, H.J.4
Conrads, T.P.5
Veenstra, T.D.6
-
91
-
-
25444531409
-
Analysis of albumin-associated peptides and proteins from ovarian cancer patients
-
Lowenthal MS, Mehta AI, Frogale K, et al. Analysis of albumin-associated peptides and proteins from ovarian cancer patients. Clin Chem 2005;51:1933-1945.
-
(2005)
Clin Chem
, vol.51
, pp. 1933-1945
-
-
Lowenthal, M.S.1
Mehta, A.I.2
Frogale, K.3
-
93
-
-
12444315072
-
Global quantitative phosphoprotein analysis using Multiplexed Proteomics technology
-
Steinberg TH, Agnew BJ, Gee KR, et al. Global quantitative phosphoprotein analysis using Multiplexed Proteomics technology. Proteomics 2003;3:1128-1144.
-
(2003)
Proteomics
, vol.3
, pp. 1128-1144
-
-
Steinberg, T.H.1
Agnew, B.J.2
Gee, K.R.3
-
94
-
-
0036391454
-
Proteome analysis of low-abundance proteins using multidimensional chromatography and isotope-coded affinity tags
-
Gygi SP, Rist B, Griffin TJ, Eng J, Aebersold R. Proteome analysis of low-abundance proteins using multidimensional chromatography and isotope-coded affinity tags. J Proteome Res 2002;1:47-54.
-
(2002)
J Proteome Res
, vol.1
, pp. 47-54
-
-
Gygi, S.P.1
Rist, B.2
Griffin, T.J.3
Eng, J.4
Aebersold, R.5
-
95
-
-
0037795741
-
Absolute quantification of proteins and phosphoproteins from cell lysates by tandem MS
-
Gerber SA, Rush J, Stemman O, Kirschner MW, Gygi SP. Absolute quantification of proteins and phosphoproteins from cell lysates by tandem MS. Proc Natl Acad Sci USA 2003;100:6940-6945.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 6940-6945
-
-
Gerber, S.A.1
Rush, J.2
Stemman, O.3
Kirschner, M.W.4
Gygi, S.P.5
|