Global quantitative phosphoprotein analysis using multiplexed proteomics technology

Proteomics

Volumn 3, Issue 7, 2003, Pages 1128-1144

  Steinberg, Thomas H ^a   Agnew, Brian J ^a   Gee, Kyle R ^a   Leung, Wai Yee ^a   Goodman, Terrie ^a   Schulenberg, Birte ^a   Hendrickson, Jill ^a   Beechem, Joseph M ^a   Haugland, Richard P ^a   Patton, Wayne F ^a  

^a MOLECULAR PROBES INC   (United States)

Author keywords

Heat shock protein 90; Phosphopeptides; Phosphoproteins; Phosphoproteome; Phosphoproteomics; Signal transduction

Indexed keywords

DYE; HEAT SHOCK PROTEIN 90; PHOSPHOPROTEIN;

CONFERENCE PAPER; FLUORESCENCE; MATRIX ASSISTED LASER DESORPTION IONIZATION TIME OF FLIGHT MASS SPECTROMETRY; POLYACRYLAMIDE GEL ELECTROPHORESIS; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN PHOSPHORYLATION; PROTEOMICS; SIGNAL TRANSDUCTION; STAIN; TECHNOLOGY; TWO DIMENSIONAL GEL ELECTROPHORESIS;

ANIMALS; BLOTTING, WESTERN; CATALYSIS; CATTLE; CHICKENS; DNA; DOSE-RESPONSE RELATIONSHIP, DRUG; ELECTROPHORESIS, GEL, TWO-DIMENSIONAL; ELECTROPHORESIS, POLYACRYLAMIDE GEL; FLUORESCENT DYES; HSP90 HEAT-SHOCK PROTEINS; KINETICS; MASS SPECTROMETRY; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; PEPTIDES; PHOSPHATES; PHOSPHOPROTEINS; PHOSPHORYLATION; PROTEIN KINASE C; PROTEIN KINASE C-ALPHA; PROTEINS; PROTEOME; RECOMBINANT PROTEINS; RNA; SIGNAL TRANSDUCTION; SPECTROMETRY, FLUORESCENCE; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION; SWINE;

EID: 12444315072     PISSN: 16159853     EISSN: None     Source Type: Journal    
DOI: 10.1002/pmic.200300434     Document Type: Conference Paper

References (56)

1. Guy, G., Philip, R., Tan, Y., Electrophoresis 1994, 15, 417-440.
2. Wind, M., Edler, M., Jakubowski, N., Linscheid, M. et al., Anal. Chem. 2001, 73, 29-35.
3. Yeargin, J., Hass, M., Curr. Biol. 1995, 5, 423-431.
4. Hu, V., Heikka, D., Dieffenbach, P., Ha, L., FASEB J. 2001, 15, 1562-1568.
5. Hu, V., Heikka, D., FASEB J. 2000, 14, 448-454.
6. Conrads, T., Issaq, H., Veenstra, T., Biochem. Biophys. Res. Commun. 2002, 290, 885-890.
7. Moore, D., Sefton, B., Current Protocols in Molecular Biology, Vol. 3, Wiley, New York 1995, pp. 18.0.3-18.4.5.
8. Kaufmann, H., Bailey, J., Fussenegger, M., Proteomics 2001, 1, 194-199.
9. Dahlberg, A., Dingman, C., Peacock, A., J. Mol. Biol. 1969, 41, 139-147.
10. Green, M., Pastewka, J., Peacock, A., Anal. Biochem. 1973, 56, 43-51.
11. McCurdy, S., Clarkson, B., Speirs, R., Feagin, F., Arch. Oral. Biol. 1990, 35, 347-357.
12. Myers, J., Veis, A., Sabsay, B., Wheeler, A., Anal. Biochem. 1996, 240, 300-302.
13. Goldberg, H., Warner, K., Anal. Biochem. 1997, 251, 227-233.
14. Fisher, J., Sharma, Y., Iuliano, S., Piccioti, R. et al., Prot. Expr. Purif. 2000, 20, 66-72.
15. Yamakoshi, Y., Tanabe, T., Oida, S., Hu, C. et al., Arch. Oral Biol. 2001, 46, 1005-1014.
16. Lait, C., Zwiazek, J., Physiol. Plant 2001, 112, 460-469.
17. Cutting, J., Roth, T., Anal. Biochem. 1973, 54, 386-394.
18. Debruyne, I., Anal. Biochem. 1983, 133, 110-115.
19. Fadden, P., Haystead, T., Anal. Biochem, 1995, 225, 81-88.
20. Hsi, K., O'Neill, S., Dupont, D., Yuan, P., Anal. Biochem. 1998, 258, 38-47.
21. Aebersold, R., Watts, J., Morrison, H., Bures, E., Anal. Biochem. 1991, 199, 51-60.
22. McDonald, J., Mackey, A., Pearson, W., Haystead, T., Mol. Cell. Proteomics 2002, 1, 314-322.
23. Brauer, M., Sykes, B., Methods Enzymol. 1984, 107, 36-81.
24. Swiderek, K., Jaquet, K., Meyer, H., Schachtele, C. et al., Eur. J. Biochem. 1990, 190, 575-582.
25. Belloque, J., De La Fuente, M., Ramos, A., J. Dairy Res. 2000, 67, 529-539.
26. Affolter, M., Watts, J., Krebs, D., Aebersold, R., Anal. Biochem. 1994, 223, 74-81.
27. Liao, P., Leykam, J., Andrews, P., Gage, D. et al., Anal. Biochem. 1994, 219, 9-20.
28. Oda, Y., Huang, K., Cross, F., Cowburn, D. et al., Proc. Natl. Acad. Sci. USA 1999, 96, 6591-6596.
29. Goshe, M., Conrads, T., Panisko, E., Angell, N. et al., Anal. Chem. 2001, 73, 2578-2586.
30. Marshall, P., Heudi, O., Bains, S., Freeman, H. et al., Analyst. 2002, 127, 459-461.
31. Zhou, H., Watts, J., Aebersold, R., Nature Biotechnol. 2001, 19, 375-378.
32. Oda, Y., Nagasu, T., Chait, B., Nature Biotechnol. 2001, 19, 317-382.
33. Martin, K., Steinberg, T., Cooley, L., Gee, K. et al., Proteomics 2003, 3, 1226-1237.
34. Laemmli, U., Nature 1970, 227, 680-685.
35. Berggren, K., Schulenberg, B., Lopez, M., Steinberg, T. et al., Proteomics 2002, 2, 486-498.
36. Berggren, K., Chernokalskaya, E., Steinberg, T., Kemper, C. et al., Electrophoresis 2000, 21, 2509-2521.
37. Byford, M., Biochem. J. 1991, 280, 261-265.
38. Steinberg, T., Haugland, R., Singer, V., Anal Biochem. 1996, 239, 238-245.
39. Steinberg, T., Jones, L., Haugland, R., Singer, V., Anal. Biochem. 1996, 239, 223-237.
40. Pretty On Top, K., Hatleberg, G., Berggren, K., Ryan, D. et al., Electrophoresis 2001, 22, 896-905.
41. Smith, P., Krohn, R., Hermanson, G., Mallia, A. et al., Anal. Biochem. 1985, 150, 76-85.
42. Smilansky, Z., Electrophoresis 2001, 22, 1616-1626.
43. Raman, B., Cheung, A., Marten, M., Electrophoresis 2002, 23, 2194-2202.
44. Lopez, M., Berggren, K., Chernokalskaya, E., Lazarev, A. et al., Electrophoresis 2000, 21, 3673-3683.
45. Berggren, K., Chernokalskaya, E., Lopez, M., Beechem, J., Patton, W., Proteomics 2001, 1, 54-65.
46. Patton, W., J. Chromatogr. B 2002, 771, 3-31.
47. Garnier, C., Lafitte, D., Jorgensen, T., Jensen, O. et al., Eur. J. Biochem. 2001, 268, 2402-2407.
48. Patton, W., Beechem, J., Curr. Opin. Chem. Biol. 2002, 6, 63-69.
49. Capps, G., Zuniga, M., BioTechniques 1990, 8, 62-69.
50. Lee, K., Harrington, M., in: Link, A. (Ed.), 2-D Proteome Analysis Protocols, Humana Press, Totowa, NJ1990, pp. 291-305.
51. Steinberg, T., Pretty On Top, K., Berggren, K., Kemper, C. et al., Proteomics 2001, 1, 841-855.
52. Schulenberg, B., Beechem, J., Patton, W., J. Chromatogr. B 2003, in press.
53. Unlu, M., Morgan, M., Minden, J., Electrophoresis 1997, 18, 2071-2077.
54. Tonge, R., Shaw, J., Middleton, B., Rowlinson, R. et al., Proteomics 2001, 1, 377-396.
55. Yan, J., Devenish, A., Walt, R., Stone, T. et al., Proteomics 2002, 2, 1682-1698.
56. Yamagata, A., Kristensen, D., Takeda, Y., Miyomoto, Y. et al., Proteomics 2002, 2, 1267-1276.