Proteomics of bronchoalveolar lavage fluid

Journal of Chromatography B: Analytical Technologies in the Biomedical and Life Sciences

Volumn 815, Issue 1-2, 2005, Pages 169-178

  Wattiez, R ^a   Falmagne, P ^a  

^a UNIVERSITY OF MONS   (Belgium)

Author keywords

Bronchoalveolar lavage fluid; Proteomics

Indexed keywords

BIOMARKERS; BODY FLUIDS; CELL CULTURE; GENES; GENETIC ENGINEERING; PULMONARY DISEASES;

BRONCHOALVEOLAR LAVAGE FLUID (BALF); EPITHELIAL LINING FLUIDS (ELF); GLOBAL ANALYSIS; PROTEOMICS;

PROTEINS;

ALLERGIC ASTHMA; CELL CULTURE; EPITHELIUM; GENETIC ANALYSIS; HUMAN; LUNG DISEASE; LUNG FIBROSIS; LUNG LAVAGE; NONHUMAN; PRIORITY JOURNAL; PROGNOSIS; PROTEIN ANALYSIS; PROTEOMICS; REVIEW;

BIOLOGICAL MARKERS; BRONCHOALVEOLAR LAVAGE FLUID; ELECTROPHORESIS, GEL, TWO-DIMENSIONAL; HUMANS; LUNG; LUNG DISEASES; PROTEOME; PROTEOMICS; PULMONARY ALVEOLI;

EID: 12344302300     PISSN: 15700232     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jchromb.2004.10.029     Document Type: Review

References (75)

1. R. Robbins, and S. Rennard R. Crystal J. West E. Weibel P. Barnes The Lung: Scientific Foundations 1996 Lippincott-Raven Philadelphia 445
2. S. Shak R. Crystal J. West E. Weibel P. Barnes The Lung: Scientific Foundations 1996 Lippincott-Raven Philadelphia 479
3. W. Blackstock, and M. Mann Proteomics: A Trends Guide 7 2000 1
4. S. Karlin, L. Brocchieri, J. Trent, B. Blaisdell, and J. Mrazek Theor. Popul. Biol. 61 2002 367
5. A. Pandey, and M. Mann Nature 405 2000 837
6. R. Sorek, R. Shamir, and G. Ast Trends Genet. 2 2004 68
7. M. Mann Anal. Chem. 72 2000 565A
8. S. Gygi, Y. Rochon, B. Franza, and R. Aebersold Mol. Cell. Biol. 19 1999 1720
9. D. Hochstrasser, J. Sanchez, and R. Appel Proteomics 7 2002 807
10. P. Binz, D. Hochstrasser, and R. Appel Clin. Chem. La. Med. 41 2003 1540
11. J. Hirsch, K. Hansen, A. Burlingame, and M. Matthay Am. Physiol. J. Lung Cell Mol. Physiol. 287 2004 L1
12. K. Barnouin Methods Mol. Biol. 26 2004 479
13. J. Peng, J. Elias, C. Thoreen, L. Licklider, and S. Gygi J Proteome Res. 1 2003 43
14. R.D. Smith Trends Biotechnol. 20 12 Suppl. 2002 3
15. M. Mann, R. Hendrickson, and A. Pandey Annu Rev. Biochem 70 2001 437
16. W. Niessen J. Chromatogr. A 794 1998 407
17. P. Righetti, A. Castagna, B. Herbert, F. Reymond, and J. Rossier Proteomics 8 2003 1397
18. M. Smolka, H. Zhou, S. Purkayastha, and R. Aebersold Anal. Biochem. 297 2001 25
19. S. Boggs Expert Rev. Proteomics 1 2004 29
20. P. Chaurand, S.A. Schwartz, and R.M. Caprioli J. Proteome Res. 3 2004 245
21. T. Hirano, K. Fujioka, B. Franzen, K. Okuzawa, K. Uryu, H. Shibanuma, K. Numata, C. Konaka, Y. Ebihara, M. Takahashi, H. Kato, and G. Auer Br. J. Cancer 75 1997 978
22. G. Chen, T.G. Gharib, C. Huang, D. Thomas, A. Shedden, J. Taylor, L. Kardia, D. Misek, T. Giordano, M. Iannettoni, M. Orringer, S. Hanash, and D. Beer Clin. Cancer Res. 8 2002 2298
23. G. Chen, T.G. Gharib, H. Wang, C.-C. Huang, R. Kuick, D.G. Thomas, K.A. Shedden, D.E. Misek, J.M.G. Taylor, T.J. Giordano, S.L.R. Kardia, M.D. Iannettoni, J. Yee, P.J. Hogg, M.B. Orringer, S.M. Hanash, and D.G. Beer Proc. Natl. Acad. Sci. U.S.A. 2003 100
24. K. Yanagisawa, Y. Shyr, B. Xu, P. Massion, P. Larsen, B. White, J. Roberts, M. Edgerton, A. Gonzalez, S. Nadaf, J. Moore, R. Caprioli, and D. Carbone Lancet 362 2003
25. R. Craven, and R. Banks Proteomics 1 2001 1200
26. R. Devlin, and H. Koren Am. J. Respir. Cell Mol. Biol. 2 1990 281
27. J. Malmstrom, G. Westergren-Thorsson, and G. Marko-Varga Electrophoresis 22 2001 1776
28. L. Ostrowski, K. Blackburn, K. Radde, M. Moyer, D. Schlatzer, A. Moseley, and R. Boucher Mol. Cell Proteomics 1 2002 451
29. J. Malmstrom, E. Tufvesson, C. Lofdahl, L. Hansson, G. Marko-Varga, and G. Westergren-Thorsson Electrophoresis 24 2003 276
30. W. Ying, K. Zhang, X. Qian, L. Xie, J. Wang, X. Xiang, Y. Cai, and D. Wu Proteomics 3 2003 64
31. J. Malmstrom, K. Larsen, L. Malmstrom, E. Tufvesson, K. Parker, J. Marchese, B. Williamson, S. Hattan, D. Patterson, S. Martin, A. Graber, H.P. Juhas, G. Westergren-Thorsson, and G. Marko-Varga J. Proteome Res. 3 2004 525
32. S. Wang, R.S. Young, N.N. Sun, and M.L. Witten Toxicology 173 2002 211
33. Q. He, T. Yip, M. Li, and J. Chiu J. Cell Biochem. 88 2003 1
34. T. Chanin, D. Merrick, W. Franklin, and F. Hirsch Curr. Opin. Pulm. Med. 10 2004 242
35. X. Xiao, D. Liu, Y. Tang, F. Guo, L. Xia, J. Liu, and D. He Dis. Markers 19 2003
36. W. Cho, T. Yip, C. Yip, V. Yip, V. Thulasiraman, R. Ngan, T. Yip, W. Lau, J. Au, S. Law, W. Cheng, V. Ma, and C. Lim Clin. Cancer Res. 10 2004 43
37. C. Hermans, P. Dong, M. Robin, M. Jadoul, A. Bernard, A. Bersten, and I. Doyle Biomarkers 8 2003 461
38. R. Robbins, and S. Rennard R. Crystal J. West E. Weibel P. Barnes The Lung: Scientific Foundations 1996 Lippincott-Raven Philadelphia 445
39. M. Griese Eur. Respir. J. 13 1999 1455
40. H.Y. Reynolds Lung 178 2000 271
41. J. Beier, K. Beeh, O. Kornmann, and R. Buhl J. Lab. Clin. Med. 144 2004 38
42. M. Lindahl, B. Stahlbom, and C. Tagesson Electrophoresis 20 1999 3670
43. M. Griese, J. Noss, and C. von Bredow Proteomics 2 2002 690
44. I. Noel-Georis, A. Bernard, P. Falmagne, and R. Wattiez J. Chromatogr. B Anal. Technol. Biomed. Life Sci. 771 2002 221
45. I. Noel-Georis, A. Bernar, P. Falmagne, and R. Wattiez Dis. Markers 17 2001 271
46. J. Wahlstrom, M. Berlin, C.M. Skold, H. Wigzell, A. Eklund, and J. Grunewald Thorax 54 1999 339
47. D. Bell G. Am. Rev. Respir. Dis. 119 1979 979
48. A. Lenz, U. Costabel, and K.L. Maier Eur. Respir. J. 9 1996 307
49. A. Lenz, B. Meyer, U. Costabel, and K. Maier Electrophoresis 14 1993 242
50. A. Lenz, B. Meyer, H. Weber, and K. Maier Electrophoresis 11 1990 510
51. M. Lindahl, B. Stahlbom, and C. Tagesson Electrophoresis 16 1995 1199
52. M. Lindahl, J. Svartz, and C. Tagesson Electrophoresis 20 1999 881
53. M. Lindahl, T. Ekstrom, J. Sorensen, and C. Tagesson Thorax 51 1996 1028
54. R. Wattiez, C. Hermans, A. Bernard, O. Lesur, and P. Falmagne Electrophoresis 20 1999 1634
55. R. Wattiez, C. Hermans, C. Cruyt, A. Bernard, and P. Falmagne Electrophoresis 21 2000 2703
56. B. Magi, L. Bini, M.G. Perari, A. Fossi, J.C. Sanchez, D. Hochstrasser, S. Paesano, R. Raggiaschi, A. Santucci, V. Pallini, and P. Rottoli Electrophoresis 23 2002 434
57. F. Sabounchi-Schutt, J. Astrom, A. Eklund, J. Grunewald, and B. Bjellqvist Electrophoresis 22 2001 1851
58. F. Sabounchi-Schutt, J. Astrom, U. Hellman, A. Eklund, and J. Grunewald Eur. Respir. J. 21 2003 414
59. A. Plymoth, C.G. Lofdahl, A. Ekberg-Jansson, M. Dahlback, H. Lindberg, T.E. Fehniger, and G. Marko-Varga Proteomics 3 2003 962
60. F. Ratjen, U. Costabel, M. Griese, and K. Paul Eur. Respir. J. 21 2003 144
61. C. He Proteomics 3 2003 87
62. M. Griese, C. von Bredow, and P. Birrer Electrophoresis 22 2001 165
63. R. Bowler, B. Duda, E. Chan, J. Enghild, L. Ware, M. Matthay, and M.W. Duncan Am. J. Physiol. Lung Cell Mol. Physiol. 286 2004 1095
64. M. Jordana, M. Dolovich, and M. Newhouse Sarcoidosis 4 1987 116
65. C. Hermans, M. Petrek, V. Kolek, B. Weynand, T. Pieters, M. Lambert, and A. Bernard Eur. Respir. J. 18 2001 507
66. C. Kroegel, J.C. Virchow, W. Luttmann, C. Walker, and J.A. Warner Eur. Respir. J. 7 1994 519
67. A.D. Jackson Trends Pharmacol. Sci. 22 2001 39
68. I. Fajardo, L. Svensson, A. Bucht, and G. Pejler Am. J. Respir. Crit. Care Med. 170 5 2004 477
69. L. Signor, B. Tigani, N. Beckmann, R. Falchetto, and M. Stoeckli Proteomics 4 2004 2101
70. T.D. Veenstra Adv. Protein Chem. 65 2003 161
71. C. von Bredow, A. Wiesener, and M. Griese Lung 181 2003 79
72. Y. Bai, D. Galetskiy, E. Damoc, C. Paschen, Z. Liu, M. Griese, S. Liu, and M. Przybylski Proteomics 4 2004 2300
73. F. Broeckaert, A. Clippe, R. Wattiez, P. Falmagne, and A. Bernard Inhal Toxicol. 15 2003 1209
74. R. Wattiez, I. Noel-Georis, C. Cruyt, F. Broeckaert, A. Bernard, and P. Falmagne Proteomics 3 2003 658
75. J.M. Oh, F. Brichory, E. Puravs, R. Kuick, C. Wood, J.M. Rouillard, J. Tra, S. Kardia, D. Beer, and S. Hanash Proteomics 1 2001 1303