DNA bending induced by carbocyclic sugar analogs constrained to the north conformation

Biopolymers

Volumn 85, Issue 5-6, 2007, Pages 438-449

  Macias, Alba T ^a   Banavali, Nilesh K ^a   MacKerell Jr , Alexander D ^a  

^a UNIVERSITY OF MARYLAND SCHOOL OF PHARMACY   (United States)

Author keywords

Conformation; DNA protein interaction; MD simulation; Nucleic acids; Oligonucleotides

Indexed keywords

CONFORMATIONS; DNA SEQUENCES; OLIGOMERS; OLIGONUCLEOTIDES; RNA; SUGARS;

DNA-PROTEIN INTERACTION; STACKING INTERACTIONS; SUGAR SUBSTITUTIONS;

MOLECULAR DYNAMICS;

CARBOHYDRATE DERIVATIVE; CURVED DNA; DOUBLE STRANDED DNA;

ARTICLE; BASE PAIRING; CHEMICAL MODIFICATION; DNA CONFORMATION; DNA SEQUENCE; ELECTRICITY; MOLECULAR DYNAMICS; NUCLEIC ACID STRUCTURE; SIMULATION; STRUCTURE ANALYSIS;

BASE PAIRING; BASE SEQUENCE; CARBOHYDRATE CONFORMATION; DNA; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; NUCLEIC ACID CONFORMATION; NUCLEOTIDES; OLIGONUCLEOTIDES; STRUCTURE-ACTIVITY RELATIONSHIP;

EID: 34247526308     PISSN: 00063525     EISSN: 10970282     Source Type: Journal    
DOI: 10.1002/bip.20673     Document Type: Article

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