-
1
-
-
0027215524
-
Methylation induced premeiotically in Ascobolus: Coextension with DNA repeat lengths and effect on transcript elongation
-
Barry, C., G. Faugeron, and J. L. Rossignol. 1993. Methylation induced premeiotically in Ascobolus: coextension with DNA repeat lengths and effect on transcript elongation. Proc. Natl. Acad. Sci. USA 90:4557-4561.
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, pp. 4557-4561
-
-
Barry, C.1
Faugeron, G.2
Rossignol, J.L.3
-
2
-
-
0037172993
-
Methylation of histone H3 Lys 4 in coding regions of active genes
-
Bernstein, B. E., E. L. Humphrey, R. L. Erlich, R. Schneider, P. Bouman, J. S. Liu, T. Kouzarides, and S. L. Schreiber. 2002. Methylation of histone H3 Lys 4 in coding regions of active genes. Proc. Natl. Acad. Sci. USA 99:8695-8700.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 8695-8700
-
-
Bernstein, B.E.1
Humphrey, E.L.2
Erlich, R.L.3
Schneider, R.4
Bouman, P.5
Liu, J.S.6
Kouzarides, T.7
Schreiber, S.L.8
-
3
-
-
19944430797
-
Genomic maps and comparative analysis of histone modifications in human and mouse
-
Bernstein, B. E., M. Kamal, K. Lindblad-Toh, S. Bekiranov, D. K. Bailey, D. J. Huebert, S. McMahon, E. K. Karlsson, E. J. Kulbokas III, T. R. Gingeras, S. L. Schreiber, and E. S. Lander. 2005. Genomic maps and comparative analysis of histone modifications in human and mouse. Cell 120:169-181.
-
(2005)
Cell
, vol.120
, pp. 169-181
-
-
Bernstein, B.E.1
Kamal, M.2
Lindblad-Toh, K.3
Bekiranov, S.4
Bailey, D.K.5
Huebert, D.J.6
McMahon, S.7
Karlsson, E.K.8
Kulbokas III, E.J.9
Gingeras, T.R.10
Schreiber, S.L.11
Lander, E.S.12
-
4
-
-
0027192267
-
Transcriptional silencing in yeast is associated with reduced nucleosome acetylation
-
Braunstein, M., A. B. Rose, S. G. Holmes, C. D. Allis, and J. R. Broach. 1993. Transcriptional silencing in yeast is associated with reduced nucleosome acetylation. Genes Dev. 7:592-604.
-
(1993)
Genes Dev
, vol.7
, pp. 592-604
-
-
Braunstein, M.1
Rose, A.B.2
Holmes, S.G.3
Allis, C.D.4
Broach, J.R.5
-
5
-
-
0024281345
-
DNA methylation and gene activity
-
Cedar, H. 1988. DNA methylation and gene activity. Cell 53:3-4.
-
(1988)
Cell
, vol.53
, pp. 3-4
-
-
Cedar, H.1
-
6
-
-
0032694084
-
DNA methylation is the primary silencing mechanism for a set of germ line- and tumor-specific genes with a CpG-rich promoter
-
De Smet, C., C. Lurquin, B. Lethé, V. Martelange, and T. Boon. 1999. DNA methylation is the primary silencing mechanism for a set of germ line- and tumor-specific genes with a CpG-rich promoter. Mol. Cell. Biol. 19:7327-7335.
-
(1999)
Mol. Cell. Biol
, vol.19
, pp. 7327-7335
-
-
De Smet, C.1
Lurquin, C.2
Lethé, B.3
Martelange, V.4
Boon, T.5
-
7
-
-
33644866509
-
Leaving a mark: The many footprints of the elongating RNA polymerase II
-
Eissenberg, J. C., and A. Shilatifard. 2006. Leaving a mark: the many footprints of the elongating RNA polymerase II. Curr. Opin. Genet. Dev. 16:184-190.
-
(2006)
Curr. Opin. Genet. Dev
, vol.16
, pp. 184-190
-
-
Eissenberg, J.C.1
Shilatifard, A.2
-
8
-
-
0036613432
-
Role for DNA methylation in the control of cell type specific maspin expression
-
Futscher, B. W., M. M. Oshiro, R. J. Wozniak, N. Holtan, C. L. Hanigan, H. Duan, and F. E. Domann. 2002. Role for DNA methylation in the control of cell type specific maspin expression. Nat. Genet. 31:175-179.
-
(2002)
Nat. Genet
, vol.31
, pp. 175-179
-
-
Futscher, B.W.1
Oshiro, M.M.2
Wozniak, R.J.3
Holtan, N.4
Hanigan, C.L.5
Duan, H.6
Domann, F.E.7
-
9
-
-
0028106737
-
Dependence of transcriptional repression on CpG methylation density
-
Hsieh, C.-L. 1994. Dependence of transcriptional repression on CpG methylation density. Mol. Cell. Biol. 14:5487-5494.
-
(1994)
Mol. Cell. Biol
, vol.14
, pp. 5487-5494
-
-
Hsieh, C.-L.1
-
10
-
-
0030793717
-
Stability of patch methylation and its impact in regions of transcriptional initiation and elongation
-
Hsieh, C.-L. 1997. Stability of patch methylation and its impact in regions of transcriptional initiation and elongation. Mol. Cell. Biol. 17:5897-5904.
-
(1997)
Mol. Cell. Biol
, vol.17
, pp. 5897-5904
-
-
Hsieh, C.-L.1
-
11
-
-
0036784594
-
DNA methylation has a local effect on transcription and histone acetylation
-
Irvine, R. A., I. G. Lin, and C.-L. Hsieh. 2002. DNA methylation has a local effect on transcription and histone acetylation. Mol. Cell. Biol. 22:6689-6696.
-
(2002)
Mol. Cell. Biol
, vol.22
, pp. 6689-6696
-
-
Irvine, R.A.1
Lin, I.G.2
Hsieh, C.-L.3
-
12
-
-
0031837109
-
Methylated DNA and MeCP2 recruit histone deacetylase to repress transcription
-
Jones, P. L., G. J. Veenstra, P. A. Wade, D. Vermaak, S. U. Kass, N. Landsberger, J. Strouboulis, and A. P. Wolffe. 1998. Methylated DNA and MeCP2 recruit histone deacetylase to repress transcription. Nat. Genet. 19:187-191.
-
(1998)
Nat. Genet
, vol.19
, pp. 187-191
-
-
Jones, P.L.1
Veenstra, G.J.2
Wade, P.A.3
Vermaak, D.4
Kass, S.U.5
Landsberger, N.6
Strouboulis, J.7
Wolffe, A.P.8
-
13
-
-
0034192205
-
MeCP2 driven transcriptional repression in vitro: Selectivity for methylated DNA, action at a distance and contacts with the basal transcription machinery
-
Kaludov, N. K., and A. P. Wolffe. 2000. MeCP2 driven transcriptional repression in vitro: selectivity for methylated DNA, action at a distance and contacts with the basal transcription machinery. Nucleic Acids Res. 28:1921-1928.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 1921-1928
-
-
Kaludov, N.K.1
Wolffe, A.P.2
-
14
-
-
0027361810
-
Inactive chromatin spreads from a focus of methylation
-
Kass, S. U., J. P. Goddard, and R. L. Adams. 1993. Inactive chromatin spreads from a focus of methylation. Mol. Cell. Biol. 13:7372-7379.
-
(1993)
Mol. Cell. Biol
, vol.13
, pp. 7372-7379
-
-
Kass, S.U.1
Goddard, J.P.2
Adams, R.L.3
-
15
-
-
23844519339
-
A high-resolution map of active promoters in the human genome
-
Kim, T. H., L. O. Barrera, M. Zheng, C. Qu, M. A. Singer, T. A. Richmond, Y. Wu, R. D. Green, and B. Ren. 2005. A high-resolution map of active promoters in the human genome. Nature 436:876-880.
-
(2005)
Nature
, vol.436
, pp. 876-880
-
-
Kim, T.H.1
Barrera, L.O.2
Zheng, M.3
Qu, C.4
Singer, M.A.5
Richmond, T.A.6
Wu, Y.7
Green, R.D.8
Ren, B.9
-
16
-
-
24044523177
-
DNA binding selectivity of MeCP2 due to a requirement for A/T sequences adjacent to methyl-CpG
-
Klose, R. J., S. A. Sarraf, L. Schmiedeberg, S. M. McDermott, I. Stancheva, and A. P. Bird. 2005. DNA binding selectivity of MeCP2 due to a requirement for A/T sequences adjacent to methyl-CpG. Mol. Cell 19:667-678.
-
(2005)
Mol. Cell
, vol.19
, pp. 667-678
-
-
Klose, R.J.1
Sarraf, S.A.2
Schmiedeberg, L.3
McDermott, S.M.4
Stancheva, I.5
Bird, A.P.6
-
17
-
-
2442454683
-
Distinct localization of histone H3 acetylation and H3-K4 methylation to the transcription start sites in the human genome
-
Liang, G., J. C. Lin, V. Wei, C. Yoo, J. C. Cheng, C. T. Nguyen, D. J. Weisenberger, G. Egger, D. Takai, F. A. Gonzales, and P. A. Jones. 2004. Distinct localization of histone H3 acetylation and H3-K4 methylation to the transcription start sites in the human genome. Proc. Natl. Acad. Sci. USA 101:7357-7362.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 7357-7362
-
-
Liang, G.1
Lin, J.C.2
Wei, V.3
Yoo, C.4
Cheng, J.C.5
Nguyen, C.T.6
Weisenberger, D.J.7
Egger, G.8
Takai, D.9
Gonzales, F.A.10
Jones, P.A.11
-
18
-
-
0035964869
-
Correlation between histone lysine methylation and developmental changes at the chicken beta-globin locus
-
Litt, M. D., M. Simpson, M. Gaszner, C. D. Allis, and G. Felsenfeld. 2001. Correlation between histone lysine methylation and developmental changes at the chicken beta-globin locus. Science 293:2453-2455.
-
(2001)
Science
, vol.293
, pp. 2453-2455
-
-
Litt, M.D.1
Simpson, M.2
Gaszner, M.3
Allis, C.D.4
Felsenfeld, G.5
-
19
-
-
7544231794
-
Intragenic DNA methylation alters chromatin structure and elongation efficiency in mammalian cells
-
Lorincz, M. C., D. R. Dickerson, M. Schmitt, and M. Groudine. 2004. Intragenic DNA methylation alters chromatin structure and elongation efficiency in mammalian cells. Nat. Struct. Mol. Biol. 11:1068-1075.
-
(2004)
Nat. Struct. Mol. Biol
, vol.11
, pp. 1068-1075
-
-
Lorincz, M.C.1
Dickerson, D.R.2
Schmitt, M.3
Groudine, M.4
-
20
-
-
18944408348
-
Mapping global histone methylation patterns in the coding regions of human genes
-
Miao, F., and R. Natarajan. 2005. Mapping global histone methylation patterns in the coding regions of human genes. Mol. Cell. Biol. 25:4650-4661.
-
(2005)
Mol. Cell. Biol
, vol.25
, pp. 4650-4661
-
-
Miao, F.1
Natarajan, R.2
-
21
-
-
0034637528
-
A distinct sequence (ATAAA)n separates methylated and unmethylated domains at the 5′-end of the GSTP1 CpG island
-
Millar, D. S., C. L. Paul, P. L. Molloy, and S. J. Clark. 2000. A distinct sequence (ATAAA)n separates methylated and unmethylated domains at the 5′-end of the GSTP1 CpG island. J. Biol. Chem. 275:24893-24899.
-
(2000)
J. Biol. Chem
, vol.275
, pp. 24893-24899
-
-
Millar, D.S.1
Paul, C.L.2
Molloy, P.L.3
Clark, S.J.4
-
22
-
-
0032574977
-
Transcriptional repression by the methyl-CpG-binding protein MeCP2 involves a histone deacetylase complex
-
Nan, X., H. H. Ng, C. A. Johnson, C. D. Laherty, B. M. Turner, R. N. Eisenman, and A. Bird. 1998. Transcriptional repression by the methyl-CpG-binding protein MeCP2 involves a histone deacetylase complex. Nature 393:386-389.
-
(1998)
Nature
, vol.393
, pp. 386-389
-
-
Nan, X.1
Ng, H.H.2
Johnson, C.A.3
Laherty, C.D.4
Turner, B.M.5
Eisenman, R.N.6
Bird, A.7
-
23
-
-
0344022572
-
Targeted recruitment of Set1 histone methylase by elongating Pol II provides a localized mark and memory of recent transcriptional activity
-
Ng, H. H., F. Robert, R. A. Young, and K. Struhl. 2003. Targeted recruitment of Set1 histone methylase by elongating Pol II provides a localized mark and memory of recent transcriptional activity. Mol. Cell 11:709-719.
-
(2003)
Mol. Cell
, vol.11
, pp. 709-719
-
-
Ng, H.H.1
Robert, F.2
Young, R.A.3
Struhl, K.4
-
24
-
-
0028051528
-
CpG island promoter region methylation patterns of the inactive-X-chromosome hypoxanthine phosphoribosyltransferase (Hprt) gene
-
Park, J.-G., and V. M. Cbapman. 1994. CpG island promoter region methylation patterns of the inactive-X-chromosome hypoxanthine phosphoribosyltransferase (Hprt) gene. Mol. Cell. Biol. 14:7975-7983.
-
(1994)
Mol. Cell. Biol
, vol.14
, pp. 7975-7983
-
-
Park, J.-G.1
Cbapman, V.M.2
-
25
-
-
0348013083
-
Promoter-restricted H3 Lys 4 di-methylation is an epigenetic mark for monoallelic expression
-
Rougeulle, C., P. Navarro, and P. Avner. 2003. Promoter-restricted H3 Lys 4 di-methylation is an epigenetic mark for monoallelic expression. Hum. Mol. Genet. 12:3343-3348.
-
(2003)
Hum. Mol. Genet
, vol.12
, pp. 3343-3348
-
-
Rougeulle, C.1
Navarro, P.2
Avner, P.3
-
26
-
-
0030885667
-
DNA methylation inhibits elongation but not initiation of transcription in Neurospora crassa
-
Rountree, M. R., and E. U. Selker. 1997. DNA methylation inhibits elongation but not initiation of transcription in Neurospora crassa. Genes Dev. 11:2383-2395.
-
(1997)
Genes Dev
, vol.11
, pp. 2383-2395
-
-
Rountree, M.R.1
Selker, E.U.2
-
27
-
-
0037179716
-
Active genes are tri-methylated at K4 of histone H3
-
Santos-Rosa, H., R. Schneider, A. J. Bannister, J. Sherriff, B. E. Bernstein, N. C. Emre, S. L. Schreiber, J. Mellor, and T. Kouzarides. 2002. Active genes are tri-methylated at K4 of histone H3. Nature 419:407-411.
-
(2002)
Nature
, vol.419
, pp. 407-411
-
-
Santos-Rosa, H.1
Schneider, R.2
Bannister, A.J.3
Sherriff, J.4
Bernstein, B.E.5
Emre, N.C.6
Schreiber, S.L.7
Mellor, J.8
Kouzarides, T.9
-
28
-
-
1342268289
-
Histone H3 lysine 4 methylation patterns in higher eukaryotic genes
-
Schneider, R., A. J. Bannister, F. A. Myers, A. W. Thorne, C. Crane-Robinson, and T. Kouzarides. 2004. Histone H3 lysine 4 methylation patterns in higher eukaryotic genes. Nat. Cell Biol. 6:73-77.
-
(2004)
Nat. Cell Biol
, vol.6
, pp. 73-77
-
-
Schneider, R.1
Bannister, A.J.2
Myers, F.A.3
Thorne, A.W.4
Crane-Robinson, C.5
Kouzarides, T.6
-
29
-
-
0034458963
-
Genomic targeting of methylated DNA: Influence of methylation on transcription, replication, chromatin structure, and histone acetylation
-
Schübeler, D., M. C. Lorincz, D. M. Cimbora, A. Telling, Y.-Q. Feng, E. E. Bouhassira, and M. Groudine. 2000. Genomic targeting of methylated DNA: influence of methylation on transcription, replication, chromatin structure, and histone acetylation. Mol. Cell. Biol 20:9103-9112.
-
(2000)
Mol. Cell. Biol
, vol.20
, pp. 9103-9112
-
-
Schübeler, D.1
Lorincz, M.C.2
Cimbora, D.M.3
Telling, A.4
Feng, Y.-Q.5
Bouhassira, E.E.6
Groudine, M.7
-
30
-
-
2642570305
-
The histone modification pattern of active genes revealed through genome-wide chromatin analysis of a higher eukaryote
-
Schübeler, D., D. M. MacAlpine, D. Scalzo, C. Wirbelauer, C. Kooperberg, F. van Leeuwen, D. E. Gottschling, L. P. O'Neill, B. M. Turner, J. Delrow, S. P. Bell, and M. Groudine. 2004. The histone modification pattern of active genes revealed through genome-wide chromatin analysis of a higher eukaryote. Genes Dev. 18:1263-1271.
-
(2004)
Genes Dev
, vol.18
, pp. 1263-1271
-
-
Schübeler, D.1
MacAlpine, D.M.2
Scalzo, D.3
Wirbelauer, C.4
Kooperberg, C.5
van Leeuwen, F.6
Gottschling, D.E.7
O'Neill, L.P.8
Turner, B.M.9
Delrow, J.10
Bell, S.P.11
Groudine, M.12
-
31
-
-
6944230814
-
Highly specific interactions between bHLH transcription factors and chromatin during retina development
-
Skowronska-Krawczyk, D., M. Ballivet, B. D. Dynlacbt, and J. M. Matter. 2004. Highly specific interactions between bHLH transcription factors and chromatin during retina development. Development 131:4447-4454.
-
(2004)
Development
, vol.131
, pp. 4447-4454
-
-
Skowronska-Krawczyk, D.1
Ballivet, M.2
Dynlacbt, B.D.3
Matter, J.M.4
-
32
-
-
14744267496
-
Association of tissue-specific differentially methylated regions (TDMs) with differential gene expression
-
Song, F., J. F. Smith, M. T. Kimura, A. D. Morrow, T. Matsuyama, H. Nagase, and W. A. Held. 2005. Association of tissue-specific differentially methylated regions (TDMs) with differential gene expression. Proc. Natl Acad. Sci. USA 102:3336-3341.
-
(2005)
Proc. Natl Acad. Sci. USA
, vol.102
, pp. 3336-3341
-
-
Song, F.1
Smith, J.F.2
Kimura, M.T.3
Morrow, A.D.4
Matsuyama, T.5
Nagase, H.6
Held, W.A.7
-
33
-
-
23044431656
-
Histone H3 lysine 9 methylation and HP1gamma are associated with transcription elongation through mammalian chromatin
-
Vakoc, C. R., S. A. Mandat, B. A. Olenchock, and G. A. Blobel. 2005. Histone H3 lysine 9 methylation and HP1gamma are associated with transcription elongation through mammalian chromatin. Mol. Cell 19:381-391.
-
(2005)
Mol. Cell
, vol.19
, pp. 381-391
-
-
Vakoc, C.R.1
Mandat, S.A.2
Olenchock, B.A.3
Blobel, G.A.4
-
34
-
-
32844459336
-
The Polycomb group protein EZH2 directly controls DNA methylation
-
Vire, E., C. Brenner, R. Deplus, L. Blanchon, M. Fraga, C. Didelot, L. Morey, A. Van Eynde, D. Bernard, J. M. Vanderwinden, M. Bollen, M. Esteller, L. Di Croce, Y. de Launoit, and F. Fuks. 2006. The Polycomb group protein EZH2 directly controls DNA methylation. Nature 439:871-874.
-
(2006)
Nature
, vol.439
, pp. 871-874
-
-
Vire, E.1
Brenner, C.2
Deplus, R.3
Blanchon, L.4
Fraga, M.5
Didelot, C.6
Morey, L.7
Van Eynde, A.8
Bernard, D.9
Vanderwinden, J.M.10
Bollen, M.11
Esteller, M.12
Di Croce, L.13
de Launoit, Y.14
Fuks, F.15
-
35
-
-
0026727256
-
Transformation of mammalian cells with genes from prokaryotes and eukaryotes
-
Wigler, M., R. Sweet, G. K. Sim, B. Wold, A. Pellicer, E. Lacy, T. Maniatis, S. Silverstein, and R. Axel. 1992. Transformation of mammalian cells with genes from prokaryotes and eukaryotes. Biotechnology 24:444-452.
-
(1992)
Biotechnology
, vol.24
, pp. 444-452
-
-
Wigler, M.1
Sweet, R.2
Sim, G.K.3
Wold, B.4
Pellicer, A.5
Lacy, E.6
Maniatis, T.7
Silverstein, S.8
Axel, R.9
-
36
-
-
33846155244
-
Role of DNA methylation and histone H3 lysine 27 methylation in tissue-specific imprinting of mouse Grb10
-
Yamasaki-Ishizaki, Y., T. Kayashima, C. K. Mapendano, H. Soejima, T. Ohta, H. Masuzaki, A. Kinoshita, T. Urano, K.-I. Yoshiura, N. Matsumoto, T. Ishimaru, T. Mukai, N. Niikawa, and T. Kishino. 2006. Role of DNA methylation and histone H3 lysine 27 methylation in tissue-specific imprinting of mouse Grb10. Mol. Cell. Biol. 27:732-742.
-
(2006)
Mol. Cell. Biol
, vol.27
, pp. 732-742
-
-
Yamasaki-Ishizaki, Y.1
Kayashima, T.2
Mapendano, C.K.3
Soejima, H.4
Ohta, T.5
Masuzaki, H.6
Kinoshita, A.7
Urano, T.8
Yoshiura, K.-I.9
Matsumoto, N.10
Ishimaru, T.11
Mukai, T.12
Niikawa, N.13
Kishino, T.14
-
37
-
-
33747773708
-
Histone H3 acetylation and H3 K4 methylation define distinct chromatin regions permissive for transgene expression
-
Yan, C., and D. D. Boyd. 2006. Histone H3 acetylation and H3 K4 methylation define distinct chromatin regions permissive for transgene expression. Mol. Cell. Biol. 26:6357-6371.
-
(2006)
Mol. Cell. Biol
, vol.26
, pp. 6357-6371
-
-
Yan, C.1
Boyd, D.D.2
|