메뉴 건너뛰기




Volumn 16, Issue 4, 2007, Pages 635-643

N-terminal domains of native multidomain proteins have the potential to assist de novo folding of their downstream domains in vivo by acting as solubility enhancers

Author keywords

Charge; De novo folding; Fusion; Multidomain proteins; N terminal domains; Size; Solubility enhancers

Indexed keywords

ACONITATE HYDRATASE; HYBRID PROTEIN; LYSINE TRANSFER RNA LIGASE; THREONINE TRANSFER RNA LIGASE;

EID: 33947728505     PISSN: 09618368     EISSN: 1469896X     Source Type: Journal    
DOI: 10.1110/ps.062330907     Document Type: Article
Times cited : (36)

References (46)
  • 1
    • 0037360296 scopus 로고    scopus 로고
    • Expression of proteins using the third domain of the Escherichia coli periplasmic-protein TolA as a fusion partner
    • Anderluh, G., Gökçe, I., and Lakey, J.H. 2003. Expression of proteins using the third domain of the Escherichia coli periplasmic-protein TolA as a fusion partner. Protein Expr. Purif. 28: 173-181.
    • (2003) Protein Expr. Purif , vol.28 , pp. 173-181
    • Anderluh, G.1    Gökçe, I.2    Lakey, J.H.3
  • 2
    • 0035823143 scopus 로고    scopus 로고
    • Escherichia coli maltose-binding protein as a molecular chaperone for recombinant intracellular cytoplasmic single-chain antibodies
    • Bach, H., Mazor, Y., Shaky, S., Shoham-Lev, A., Berdichevsky, Y., Gutnick, D.L., and Benhar, I. 2001. Escherichia coli maltose-binding protein as a molecular chaperone for recombinant intracellular cytoplasmic single-chain antibodies. J. Mol. Biol. 312: 79-93.
    • (2001) J. Mol. Biol , vol.312 , pp. 79-93
    • Bach, H.1    Mazor, Y.2    Shaky, S.3    Shoham-Lev, A.4    Berdichevsky, Y.5    Gutnick, D.L.6    Benhar, I.7
  • 3
    • 0042927956 scopus 로고    scopus 로고
    • High throughput protein production for functional proteomics
    • Braun, P. and LaBaer, J. 2003. High throughput protein production for functional proteomics. Trends Biotechnol. 21: 383-388.
    • (2003) Trends Biotechnol , vol.21 , pp. 383-388
    • Braun, P.1    LaBaer, J.2
  • 4
    • 0035951410 scopus 로고    scopus 로고
    • Protein aggregation as bacterial inclusion bodies is reversible
    • Carrió, M.M. and Villaverde, A. 2001. Protein aggregation as bacterial inclusion bodies is reversible. FEBS Lett. 489: 29-33.
    • (2001) FEBS Lett , vol.489 , pp. 29-33
    • Carrió, M.M.1    Villaverde, A.2
  • 6
    • 0037059069 scopus 로고    scopus 로고
    • Studies of the aggregation of mutant proteins in vitro provide insights into the genetics of amyloid diseases
    • Chiti, F., Calamai, M., Taddei, N., Stefani, M., Ramponi, G., and Dobson, C.M. 2002. Studies of the aggregation of mutant proteins in vitro provide insights into the genetics of amyloid diseases. Proc. Natl. Acad. Sci. 99: 16419-16426.
    • (2002) Proc. Natl. Acad. Sci , vol.99 , pp. 16419-16426
    • Chiti, F.1    Calamai, M.2    Taddei, N.3    Stefani, M.4    Ramponi, G.5    Dobson, C.M.6
  • 8
    • 0026317442 scopus 로고
    • Effect of polyanions on the refolding of human acidic fibroblast growth factor
    • Dabora, J.M., Sanyal, G., and Middaugh, C.R. 1991. Effect of polyanions on the refolding of human acidic fibroblast growth factor. J. Biol. Chem. 266: 23637-23640.
    • (1991) J. Biol. Chem , vol.266 , pp. 23637-23640
    • Dabora, J.M.1    Sanyal, G.2    Middaugh, C.R.3
  • 9
    • 0033589826 scopus 로고    scopus 로고
    • New fusion protein systems designed to give soluble expression in Escherichia coli
    • Davis, G.D., Elisee, C., Newham, D.M., and Harrison, R.G. 1999. New fusion protein systems designed to give soluble expression in Escherichia coli. Biotechnol. Bioeng. 65: 382-388.
    • (1999) Biotechnol. Bioeng , vol.65 , pp. 382-388
    • Davis, G.D.1    Elisee, C.2    Newham, D.M.3    Harrison, R.G.4
  • 10
    • 0033549770 scopus 로고    scopus 로고
    • Trigger factor and DnaK cooperate in folding of newly synthesized proteins
    • Deuerling, E., Schulze-Specking, A., Tomoyasu, T., Mogk, A., and Bukau, B. 1999. Trigger factor and DnaK cooperate in folding of newly synthesized proteins. Nature 400: 693-696.
    • (1999) Nature , vol.400 , pp. 693-696
    • Deuerling, E.1    Schulze-Specking, A.2    Tomoyasu, T.3    Mogk, A.4    Bukau, B.5
  • 11
    • 33746744319 scopus 로고    scopus 로고
    • Enhancement of soluble protein expression through the use of fusion tags
    • Esposito, D. and Chatterjee, D.K. 2006. Enhancement of soluble protein expression through the use of fusion tags. Curr. Opin. Biotechnol. 17: 353-358.
    • (2006) Curr. Opin. Biotechnol , vol.17 , pp. 353-358
    • Esposito, D.1    Chatterjee, D.K.2
  • 12
    • 0024554107 scopus 로고
    • The groES and groEL heat shock gene products of Escherichia coli are essential for bacterial growth at all temperatures
    • Fayet, O., Ziegelhoffer, T., and Georgopoulos, C. 1989. The groES and groEL heat shock gene products of Escherichia coli are essential for bacterial growth at all temperatures. J. Bacteriol. 171: 1379-1385.
    • (1989) J. Bacteriol , vol.171 , pp. 1379-1385
    • Fayet, O.1    Ziegelhoffer, T.2    Georgopoulos, C.3
  • 13
    • 0035104597 scopus 로고    scopus 로고
    • Single amino acid substitutions on the surface of Escherichia coli maltose-binding protein can have a profound impact on the solubility of fusion proteins
    • Fox, J.D., Kapust, R.B., and Waugh, D.S. 2001. Single amino acid substitutions on the surface of Escherichia coli maltose-binding protein can have a profound impact on the solubility of fusion proteins. Protein Sci. 10: 622-630.
    • (2001) Protein Sci , vol.10 , pp. 622-630
    • Fox, J.D.1    Kapust, R.B.2    Waugh, D.S.3
  • 14
    • 0032983520 scopus 로고    scopus 로고
    • Co-translational domain folding as the structural basis for the rapid de novo folding of firefly luciferase
    • Frydman, J., Erdjument-Bromage, H., Tempst, P., and Hartl, F.U. 1999. Co-translational domain folding as the structural basis for the rapid de novo folding of firefly luciferase. Nat. Struct. Biol. 6: 697-705.
    • (1999) Nat. Struct. Biol , vol.6 , pp. 697-705
    • Frydman, J.1    Erdjument-Bromage, H.2    Tempst, P.3    Hartl, F.U.4
  • 15
    • 0034913646 scopus 로고    scopus 로고
    • Reversible formation of on-pathway macroscopic aggregates during the folding of maltose binding protein
    • Ganesh, C., Zaidi, F.N., Udgaonkar, J.B., and Varadarajan, R. 2001. Reversible formation of on-pathway macroscopic aggregates during the folding of maltose binding protein. Protein Sci. 10: 1635-1644.
    • (2001) Protein Sci , vol.10 , pp. 1635-1644
    • Ganesh, C.1    Zaidi, F.N.2    Udgaonkar, J.B.3    Varadarajan, R.4
  • 16
    • 0037040541 scopus 로고    scopus 로고
    • Molecular chaperones in the cytosol: From nascent chain to folded protein
    • Hartl, F.U. and Hayer-Hartl, M. 2002. Molecular chaperones in the cytosol: From nascent chain to folded protein. Science 295: 1852-1858.
    • (2002) Science , vol.295 , pp. 1852-1858
    • Hartl, F.U.1    Hayer-Hartl, M.2
  • 17
    • 0034623013 scopus 로고    scopus 로고
    • Conversion of two-state to multi-state folding kinetics on fusion of two protein foldons
    • Inaba, K., Kobayashi, N., and Fersht, A.R. 2000. Conversion of two-state to multi-state folding kinetics on fusion of two protein foldons. J. Mol. Biol. 302: 219-233.
    • (2000) J. Mol. Biol , vol.302 , pp. 219-233
    • Inaba, K.1    Kobayashi, N.2    Fersht, A.R.3
  • 19
    • 0032787876 scopus 로고    scopus 로고
    • Escherichia coli maltose-binding protein is uncommonly effective at promoting the solubility of polypeptides to which it is fused
    • Kapust, R.B. and Waugh, D.S. 1999. Escherichia coli maltose-binding protein is uncommonly effective at promoting the solubility of polypeptides to which it is fused. Protein Sci. 8: 1668-1674.
    • (1999) Protein Sci , vol.8 , pp. 1668-1674
    • Kapust, R.B.1    Waugh, D.S.2
  • 20
    • 0035711194 scopus 로고    scopus 로고
    • Tobacco etch virus protease: Mechanism of autolysis and rational design of stable mutants with wild-type catalytic proficiency
    • Kapust, R.B., Tözsér, J., Fox, J.D., Anderson, D.E., Cherry, S., Copeland, T.D., and Waugh, D.S. 2001. Tobacco etch virus protease: Mechanism of autolysis and rational design of stable mutants with wild-type catalytic proficiency. Protein Eng. 14: 993-1000.
    • (2001) Protein Eng , vol.14 , pp. 993-1000
    • Kapust, R.B.1    Tözsér, J.2    Fox, J.D.3    Anderson, D.E.4    Cherry, S.5    Copeland, T.D.6    Waugh, D.S.7
  • 23
    • 14744292185 scopus 로고
    • A thioredoxin gene fusion expression system that circumvents inclusion body formation in the E. coli cytoplasm
    • LaVallie, E.R., DiBlasio, E.A., Kovacic, S., Grant, K.L., Schendel, P.F., and McCoy, J.M. 1993. A thioredoxin gene fusion expression system that circumvents inclusion body formation in the E. coli cytoplasm. Biotechnology (N. Y.) 11: 187-193.
    • (1993) Biotechnology (N. Y.) , vol.11 , pp. 187-193
    • LaVallie, E.R.1    DiBlasio, E.A.2    Kovacic, S.3    Grant, K.L.4    Schendel, P.F.5    McCoy, J.M.6
  • 24
    • 0033198602 scopus 로고    scopus 로고
    • Novel secretion system of recombinant Saccharomyces cerevisiae using an N-terminus residue of human IL-1β as secretion enhancer
    • Lee, J., Choi, S.I., Jang, J.S., Jang, K., Moon, J.W., Bae, C.S., Yang, D.S., and Seong, B.L. 1999. Novel secretion system of recombinant Saccharomyces cerevisiae using an N-terminus residue of human IL-1β as secretion enhancer. Biotechnol. Prog. 15: 884-890.
    • (1999) Biotechnol. Prog , vol.15 , pp. 884-890
    • Lee, J.1    Choi, S.I.2    Jang, J.S.3    Jang, K.4    Moon, J.W.5    Bae, C.S.6    Yang, D.S.7    Seong, B.L.8
  • 25
    • 0016206102 scopus 로고
    • Renaturation of Escherichia coli tryptophanase after exposure to 8 M urea. Evidence for the existence of nucleation centers
    • London, J., Skrzynia, C., and Goldberg, M.E. 1974. Renaturation of Escherichia coli tryptophanase after exposure to 8 M urea. Evidence for the existence of nucleation centers. Eur. J. Biochem. 47: 409-415.
    • (1974) Eur. J. Biochem , vol.47 , pp. 409-415
    • London, J.1    Skrzynia, C.2    Goldberg, M.E.3
  • 26
    • 0030844281 scopus 로고    scopus 로고
    • Recombination of protein domains facilitated by co-translational folding in eukaryotes
    • Netzer,W.J. and Hartl, F.U. 1997. Recombination of protein domains facilitated by co-translational folding in eukaryotes. Nature 388: 343-349.
    • (1997) Nature , vol.388 , pp. 343-349
    • Netzer, W.J.1    Hartl, F.U.2
  • 27
    • 0034710994 scopus 로고    scopus 로고
    • Structural studies of lysyl-tRNA synthetase: Conformational changes induced by substrate binding
    • Onesti, S., Desogus, G., Brevet, A., Chen, J., Plateau, P., Blanquet, S., and Brick, P. 2000. Structural studies of lysyl-tRNA synthetase: Conformational changes induced by substrate binding. Biochemistry 39: 12853-12861.
    • (2000) Biochemistry , vol.39 , pp. 12853-12861
    • Onesti, S.1    Desogus, G.2    Brevet, A.3    Chen, J.4    Plateau, P.5    Blanquet, S.6    Brick, P.7
  • 28
    • 0034730203 scopus 로고    scopus 로고
    • Designed protein tetramer zipped together with a hydrophobic Alzheimer homology: A structural clue to amyloid assembly
    • Otzen, D.E., Kristensen, O., and Oliveberg, M. 2000. Designed protein tetramer zipped together with a hydrophobic Alzheimer homology: A structural clue to amyloid assembly. Proc. Natl. Acad. Sci. 97: 9907-9912.
    • (2000) Proc. Natl. Acad. Sci , vol.97 , pp. 9907-9912
    • Otzen, D.E.1    Kristensen, O.2    Oliveberg, M.3
  • 29
    • 0032978995 scopus 로고    scopus 로고
    • Acceleration of the refolding of Arcrepressor by nucleic acids and other polyanions
    • Rentzeperis, D., Jonsson, T., and Sauer, R.T. 1999. Acceleration of the refolding of Arcrepressor by nucleic acids and other polyanions. Nat. Struct. Biol. 6: 569-573.
    • (1999) Nat. Struct. Biol , vol.6 , pp. 569-573
    • Rentzeperis, D.1    Jonsson, T.2    Sauer, R.T.3
  • 30
    • 0032571132 scopus 로고    scopus 로고
    • Order of fusions between bacterial and mammalian proteins can determine solubility in Escherichia coli
    • Sachdev, D. and Chirgwin, J.M. 1998. Order of fusions between bacterial and mammalian proteins can determine solubility in Escherichia coli. Biochem. Biophys. Res. Commun. 244: 933-937.
    • (1998) Biochem. Biophys. Res. Commun , vol.244 , pp. 933-937
    • Sachdev, D.1    Chirgwin, J.M.2
  • 31
    • 0033617335 scopus 로고    scopus 로고
    • The structure of threonyl-tRNA synthetase-tRNAThr complex enlightens its repressor activity and reveals an essential zinc ion in the active site
    • Sankaranarayanan, R., Dock-Bregeon, A.C., Romby, P., Caillet, J., Springer, M., Rees, B., Ehresmann, C., Ehresmann, B., and Moras, D. 1999. The structure of threonyl-tRNA synthetase-tRNAThr complex enlightens its repressor activity and reveals an essential zinc ion in the active site. Cell 97: 371-381.
    • (1999) Cell , vol.97 , pp. 371-381
    • Sankaranarayanan, R.1    Dock-Bregeon, A.C.2    Romby, P.3    Caillet, J.4    Springer, M.5    Rees, B.6    Ehresmann, C.7    Ehresmann, B.8    Moras, D.9
  • 32
    • 0034490227 scopus 로고    scopus 로고
    • Intramolecular chaperones: Polypeptide extensions that modulate protein folding
    • Shinde, U. and Inouye, M. 2000. Intramolecular chaperones: polypeptide extensions that modulate protein folding. Semin. Cell Dev. Biol. 11: 35-44.
    • (2000) Semin. Cell Dev. Biol , vol.11 , pp. 35-44
    • Shinde, U.1    Inouye, M.2
  • 33
    • 0032878322 scopus 로고    scopus 로고
    • Formation of short-lived protein aggregates directly from the coil in two-state folding
    • Silow, M., Tan, Y.J., Fersht, A.R., and Oliveberg, M. 1999. Formation of short-lived protein aggregates directly from the coil in two-state folding. Biochemistry 38: 13006-13012.
    • (1999) Biochemistry , vol.38 , pp. 13006-13012
    • Silow, M.1    Tan, Y.J.2    Fersht, A.R.3    Oliveberg, M.4
  • 34
    • 0347911980 scopus 로고    scopus 로고
    • A favorable solubility partner for the recombinant expression of streptavidin
    • Sørensen, H.P., Sperling-Petersen, H.U., and Mortensen, K.K. 2003. A favorable solubility partner for the recombinant expression of streptavidin. Protein Expr. Purif. 32: 252-259.
    • (2003) Protein Expr. Purif , vol.32 , pp. 252-259
    • Sørensen, H.P.1    Sperling-Petersen, H.U.2    Mortensen, K.K.3
  • 35
    • 0029785453 scopus 로고    scopus 로고
    • Specific aggregation of partially folded polypeptide chains: The molecular basis of inclusion body composition
    • Speed, M.A., Wang, D.I., and King, J. 1996. Specific aggregation of partially folded polypeptide chains: The molecular basis of inclusion body composition. Nat. Biotechnol. 14: 1283-1287.
    • (1996) Nat. Biotechnol , vol.14 , pp. 1283-1287
    • Speed, M.A.1    Wang, D.I.2    King, J.3
  • 36
    • 31344479583 scopus 로고    scopus 로고
    • Effective cotranslational folding of firefly luciferase without chaperones of the Hsp70 family
    • Svetlov, M.S., Kommer, A., Kolb, V.A., and Spirin, A.S. 2006. Effective cotranslational folding of firefly luciferase without chaperones of the Hsp70 family. Protein Sci. 15: 242-247.
    • (2006) Protein Sci , vol.15 , pp. 242-247
    • Svetlov, M.S.1    Kommer, A.2    Kolb, V.A.3    Spirin, A.S.4
  • 37
    • 33646897305 scopus 로고    scopus 로고
    • Structural features of the GroEL-GroES nano-cage required for rapid folding of encapsulated protein
    • Tang, Y.C., Chang, H.C., Roeben, A., Wischnewski, D., Kerner, M.J., Hartl, F.U., and Hayer-Hartl, M. 2006. Structural features of the GroEL-GroES nano-cage required for rapid folding of encapsulated protein. Cell 125: 903-914.
    • (2006) Cell , vol.125 , pp. 903-914
    • Tang, Y.C.1    Chang, H.C.2    Roeben, A.3    Wischnewski, D.4    Kerner, M.J.5    Hartl, F.U.6    Hayer-Hartl, M.7
  • 39
    • 0034669882 scopus 로고    scopus 로고
    • Why are "natively unfolded" proteins unstructured under physiologic conditions?
    • Uversky, V.N., Gillespie, J.R., and Fink, A.L. 2000. Why are "natively unfolded" proteins unstructured under physiologic conditions? Proteins 41: 415-427.
    • (2000) Proteins , vol.41 , pp. 415-427
    • Uversky, V.N.1    Gillespie, J.R.2    Fink, A.L.3
  • 40
    • 0442307793 scopus 로고    scopus 로고
    • Low temperature of GroEL/ES overproduction permits growth of Escherichia coli cells lacking trigger factor and DnaK
    • Vorderwülbecke, S., Kramer, G., Merz, F., Kurz, T.A., Rauch, T., Zachmann-Brand, B., Bukau, B., and Deuerling, E. 2004. Low temperature of GroEL/ES overproduction permits growth of Escherichia coli cells lacking trigger factor and DnaK. FEBS Lett. 559: 181-187.
    • (2004) FEBS Lett , vol.559 , pp. 181-187
    • Vorderwülbecke, S.1    Kramer, G.2    Merz, F.3    Kurz, T.A.4    Rauch, T.5    Zachmann-Brand, B.6    Bukau, B.7    Deuerling, E.8
  • 41
    • 0037304389 scopus 로고    scopus 로고
    • Genetic screens and directed evolution for protein solubility
    • Waldo, G.S. 2003. Genetic screens and directed evolution for protein solubility. Curr. Opin. Chem. Biol. 7: 33-38.
    • (2003) Curr. Opin. Chem. Biol , vol.7 , pp. 33-38
    • Waldo, G.S.1
  • 42
    • 0028819842 scopus 로고
    • Effects of overexpressing folding modulators on the in vivo folding of heterologous proteins in Escherichia coli
    • Wall, J.G. and Plückthun, A. 1995. Effects of overexpressing folding modulators on the in vivo folding of heterologous proteins in Escherichia coli. Curr. Opin. Biotechnol. 6: 507-516.
    • (1995) Curr. Opin. Biotechnol , vol.6 , pp. 507-516
    • Wall, J.G.1    Plückthun, A.2
  • 43
    • 0036260715 scopus 로고    scopus 로고
    • Williams, C.H., Stillman, T.J., Barynin, V.V., Sedelnikova, S.E., Tang, Y., Green, J., Guest, J.R., and Artymiuk, P.J. 2002. E. coli aconitase B structure reveals a HEAT-like domain with implications for protein-protein recognition. Nat. Struct. Biol. 9: 447-452.
    • Williams, C.H., Stillman, T.J., Barynin, V.V., Sedelnikova, S.E., Tang, Y., Green, J., Guest, J.R., and Artymiuk, P.J. 2002. E. coli aconitase B structure reveals a HEAT-like domain with implications for protein-protein recognition. Nat. Struct. Biol. 9: 447-452.
  • 44
    • 1642351870 scopus 로고    scopus 로고
    • Chaperone networks in bacteria: Analysis of protein homeostasis in minimal cells
    • Wong, P. and Houry, W.A. 2004. Chaperone networks in bacteria: Analysis of protein homeostasis in minimal cells. J. Struct. Biol. 146: 79-89.
    • (2004) J. Struct. Biol , vol.146 , pp. 79-89
    • Wong, P.1    Houry, W.A.2
  • 45
    • 28644437048 scopus 로고    scopus 로고
    • The importance of sequence diversity in the aggregation and evolution of proteins
    • Wright, C.F., Teichmann, S.A., Clarke, J., and Dobson, C.M. 2005. The importance of sequence diversity in the aggregation and evolution of proteins. Nature 438: 878-881.
    • (2005) Nature , vol.438 , pp. 878-881
    • Wright, C.F.1    Teichmann, S.A.2    Clarke, J.3    Dobson, C.M.4
  • 46
    • 3142609724 scopus 로고    scopus 로고
    • Protein aggregation during overexpression limited by peptide extensions with large net negative charge
    • Zhang, Y.B., Howitt, J., McCorkle, S., Lawrence, P., Springer, K., and Freimuth, P. 2004. Protein aggregation during overexpression limited by peptide extensions with large net negative charge. Protein Expr. Purif. 36: 207-216.
    • (2004) Protein Expr. Purif , vol.36 , pp. 207-216
    • Zhang, Y.B.1    Howitt, J.2    McCorkle, S.3    Lawrence, P.4    Springer, K.5    Freimuth, P.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.