-
1
-
-
0030962189
-
Structural and functional considerations of the aminoacylation reaction
-
Arnez, J.G., and Moras, D. (1997). Structural and functional considerations of the aminoacylation reaction. Trends Biochem. Sci. 22, 211-216.
-
(1997)
Trends Biochem. Sci.
, vol.22
, pp. 211-216
-
-
Arnez, J.G.1
Moras, D.2
-
2
-
-
0027412196
-
ALSCRIPT: A tool to format multiple sequence alignments
-
Barton, G.J. (1993). ALSCRIPT: a tool to format multiple sequence alignments. Protein Eng. 6, 37-40.
-
(1993)
Protein Eng.
, vol.6
, pp. 37-40
-
-
Barton, G.J.1
-
3
-
-
0028105601
-
The 2.9 Å crystal structure of T. thermophilus seryl-tRNA synthetase complexed with tRNA(Ser)
-
Biou, V., Yaremchuk, A., Tukalo, M., and Cusack, S. (1994). The 2.9 Å crystal structure of T. thermophilus seryl-tRNA synthetase complexed with tRNA(Ser). Science 263, 1404-1410.
-
(1994)
Science
, vol.263
, pp. 1404-1410
-
-
Biou, V.1
Yaremchuk, A.2
Tukalo, M.3
Cusack, S.4
-
4
-
-
0027853904
-
Translational regulation of the Escherichia coli threonyl-tRNA synthetase gene: Structural and functional importance of the thrS operator domains
-
Brunel, C., Romby, P., Moine, H., Caillet, J., Grunberg, M.M., Springer, M., Ehresmann, B., and Ehresmann, C. (1993). Translational regulation of the Escherichia coli threonyl-tRNA synthetase gene: structural and functional importance of the thrS operator domains. Biochimie 75, 1167-1179.
-
(1993)
Biochimie
, vol.75
, pp. 1167-1179
-
-
Brunel, C.1
Romby, P.2
Moine, H.3
Caillet, J.4
Grunberg, M.M.5
Springer, M.6
Ehresmann, B.7
Ehresmann, C.8
-
5
-
-
3543012707
-
Crystallography and NMR system (CNS): A new software system for macromolecular structure determination
-
Brünger, A.T., Adams, P.D., Clore, G.M., Delano, W.L, Gros, P., Grosse-Kunstleve, R.W., Jiang, U.S., Kuszweski, J., Nilges, M., Pannu, N.S., et al. (1998). Crystallography and NMR system (CNS): a new software system for macromolecular structure determination. Acta Crystallogr. D 54, 905-921.
-
(1998)
Acta Crystallogr. D
, vol.54
, pp. 905-921
-
-
Brünger, A.T.1
Adams, P.D.2
Clore, G.M.3
Delano, W.L.4
Gros, P.5
Grosse-Kunstleve, R.W.6
Jiang, U.S.7
Kuszweski, J.8
Nilges, M.9
Pannu, N.S.10
-
6
-
-
0025633837
-
Crystallographic study at 2.5 Å resolution of the interaction of methionyl-tRNA synthetase from Escherichia coli with ATP
-
Brunie, S., Zelwer, C., and Risler, J.-L. (1990). Crystallographic study at 2.5 Å resolution of the interaction of methionyl-tRNA synthetase from Escherichia coli with ATP. J. Mol. Biol. 276, 411-424.
-
(1990)
J. Mol. Biol.
, vol.276
, pp. 411-424
-
-
Brunie, S.1
Zelwer, C.2
Risler, J.-L.3
-
7
-
-
0027162930
-
Dissection of a class II tRNA synthetase: Determinants for minihelix recognition are tightly associated with domain for amino acid activation
-
Buechter, D.D., and Schimmel, P. (1993). Dissection of a class II tRNA synthetase: determinants for minihelix recognition are tightly associated with domain for amino acid activation. Biochemistry 32, 5267-5272.
-
(1993)
Biochemistry
, vol.32
, pp. 5267-5272
-
-
Buechter, D.D.1
Schimmel, P.2
-
9
-
-
0028103275
-
The CCP4 suite: Programs for protein crystallography
-
CCP4 (Collaborative Computational Project No. 4). (1994). The CCP4 suite: programs for protein crystallography. Acta Crystallogr. D 50, 760-763.
-
(1994)
Acta Crystallogr. D
, vol.50
, pp. 760-763
-
-
-
10
-
-
0026409452
-
Structural biology of zinc
-
Christianson, D.W. (1991). Structural biology of zinc. Adv. Protein Chem. 42, 281-355.
-
(1991)
Adv. Protein Chem.
, vol.42
, pp. 281-355
-
-
Christianson, D.W.1
-
11
-
-
0029099218
-
Eleven down and nine to go
-
Cusack, S. (1995). Eleven down and nine to go. Nat. Struct. Biol. 2, 824-831.
-
(1995)
Nat. Struct. Biol.
, vol.2
, pp. 824-831
-
-
Cusack, S.1
-
12
-
-
0032518606
-
TRNA (Pro) anticodon recognition by Thermus thermophilus prolyl-tRNA synthetase
-
Cusack, S., Yaremchuk, A., Krikliviy, I., and Tukalo, M. (1998). tRNA (Pro) anticodon recognition by Thermus thermophilus prolyl-tRNA synthetase. Structure 6, 101-108.
-
(1998)
Structure
, vol.6
, pp. 101-108
-
-
Cusack, S.1
Yaremchuk, A.2
Krikliviy, I.3
Tukalo, M.4
-
13
-
-
0031058188
-
Maximum-likelihood heavy-atom parameter refinement in the MIR and MAD methods
-
De La Fortelle, E., and Bricogne, G. (1997). Maximum-likelihood heavy-atom parameter refinement in the MIR and MAD methods. Methods Enzymol. 276, 472-494.
-
(1997)
Methods Enzymol.
, vol.276
, pp. 472-494
-
-
De La Fortelle, E.1
Bricogne, G.2
-
14
-
-
0027674975
-
The aminoacyl-tRNA synthetase family: Modules at work
-
Delarue, M., and Moras, D. (1993). The aminoacyl-tRNA synthetase family: modules at work. Bioessays 15, 675-687.
-
(1993)
Bioessays
, vol.15
, pp. 675-687
-
-
Delarue, M.1
Moras, D.2
-
15
-
-
0025158208
-
Partition of tRNA synthetases into two classes based on mutually exclusive sets of sequence motifs
-
Eriani, G., Delarue, M., Poch, O., Gangloff, J., and Moras, D. (1990). Partition of tRNA synthetases into two classes based on mutually exclusive sets of sequence motifs. Nature 347, 203-206.
-
(1990)
Nature
, vol.347
, pp. 203-206
-
-
Eriani, G.1
Delarue, M.2
Poch, O.3
Gangloff, J.4
Moras, D.5
-
16
-
-
0027609916
-
SETOR: Hardware lighted three-dimensional solid model representations of macromolecules
-
Evans, S.V. (1993). SETOR: hardware lighted three-dimensional solid model representations of macromolecules. J. Mol. Graph. 11, 134-138.
-
(1993)
J. Mol. Graph.
, vol.11
, pp. 134-138
-
-
Evans, S.V.1
-
17
-
-
0017326738
-
Editing mechanisms in protein synthesis. Rejection of valine by the isoleucyl-tRNA synthetase
-
Fersht, A.R. (1977). Editing mechanisms in protein synthesis. Rejection of valine by the isoleucyl-tRNA synthetase. Biochemistry 16, 1025-1030.
-
(1977)
Biochemistry
, vol.16
, pp. 1025-1030
-
-
Fersht, A.R.1
-
19
-
-
0002296970
-
TRNA-like structures in plant viral RNAs
-
Florentz, C., and Giegé, R. (1995). tRNA-like structures in plant viral RNAs. In Aminoacyl-tRNA Synthetase: Occurrence, Structure, and Function, D. Soll and U.L. RajBhandary, eds. (Washington D.C.: ASM Press), pp. 141-164.
-
(1995)
Aminoacyl-tRNA Synthetase: Occurrence, Structure, and Function
, pp. 141-164
-
-
Florentz, C.1
Giegé, R.2
-
21
-
-
0028267438
-
Threonyl-tRNA synthetase from yeast. Discrimination of 19 amino acids in aminoacylation of tRNA(Thr)-C-C-A and tRNA(Thr)-C-C-A(2′NH2)
-
Freist, W., Sternbach, H., and Cramer, F. (1994). Threonyl-tRNA synthetase from yeast. Discrimination of 19 amino acids in aminoacylation of tRNA(Thr)-C-C-A and tRNA(Thr)-C-C-A(2′NH2). Eur. J. Biochem. 220, 745-752.
-
(1994)
Eur. J. Biochem.
, vol.220
, pp. 745-752
-
-
Freist, W.1
Sternbach, H.2
Cramer, F.3
-
22
-
-
0030023881
-
Functional evidence for indirect recognition of G. U in tRNA(Ala) by alanyl-tRNA synthetase
-
Gabriel, K., Schneider, J., and McClain, W.H. (1996). Functional evidence for indirect recognition of G. U in tRNA(Ala) by alanyl-tRNA synthetase. Science 277, 195-197.
-
(1996)
Science
, vol.277
, pp. 195-197
-
-
Gabriel, K.1
Schneider, J.2
McClain, W.H.3
-
23
-
-
0027787803
-
A counterselectable pACYC184-based lacZ alpha-complementing plasmid vector with novel multiple cloning sites; construction of chromosomal deletions in Klebsiella pneumoniae
-
Geissler, S., and Drummond, M. (1993). A counterselectable pACYC184-based lacZ alpha-complementing plasmid vector with novel multiple cloning sites; construction of chromosomal deletions in Klebsiella pneumoniae. Gene 136, 253-255.
-
(1993)
Gene
, vol.136
, pp. 253-255
-
-
Geissler, S.1
Drummond, M.2
-
24
-
-
0026545111
-
The specificity of translational control switched with transfer RNA identity rules
-
Graffe, M., Dondon, J., Caillet, J., Romby, P., Ehresmann, C., Ehresmann, B., and Springer, M. (1992). The specificity of translational control switched with transfer RNA identity rules. Science 255, 994-996.
-
(1992)
Science
, vol.255
, pp. 994-996
-
-
Graffe, M.1
Dondon, J.2
Caillet, J.3
Romby, P.4
Ehresmann, C.5
Ehresmann, B.6
Springer, M.7
-
25
-
-
0024340114
-
New method for generating deletions and gene replacements in Escherichia coll
-
Hamilton, C.M., Aldea, M., Washburn, B.K., Babitzke, P., and Kushner, S.R. (1989). New method for generating deletions and gene replacements in Escherichia coll. J. Bacteriol. 171, 4617-4622.
-
(1989)
J. Bacteriol.
, vol.171
, pp. 4617-4622
-
-
Hamilton, C.M.1
Aldea, M.2
Washburn, B.K.3
Babitzke, P.4
Kushner, S.R.5
-
26
-
-
0026692010
-
Identity determinants of E. coli threonine tRNA
-
Hasegawa, T., Miyano, M., Himeno, H., Sano, Y., Kimura, K., and Shimizu, M. (1992). Identity determinants of E. coli threonine tRNA. Biochem. Biophys. Res. Commun. 184, 478-484.
-
(1992)
Biochem. Biophys. Res. Commun.
, vol.184
, pp. 478-484
-
-
Hasegawa, T.1
Miyano, M.2
Himeno, H.3
Sano, Y.4
Kimura, K.5
Shimizu, M.6
-
27
-
-
0026795220
-
Editing of errors in selection of amino acids for protein synthesis
-
Jakubowski, H., and Goldman, E. (1992). Editing of errors in selection of amino acids for protein synthesis. Microbiol. Rev. 56, 412-429.
-
(1992)
Microbiol. Rev.
, vol.56
, pp. 412-429
-
-
Jakubowski, H.1
Goldman, E.2
-
28
-
-
84889120137
-
Improved methods for building protein models in electron density maps and the location of errors in these models
-
Jones, T.A., Zou, J.Y., Cowan, S.W., and Kjeldgaard, M. (1991). Improved methods for building protein models in electron density maps and the location of errors in these models. Acta Crystallogr. A 47, 110-119.
-
(1991)
Acta Crystallogr. a
, vol.47
, pp. 110-119
-
-
Jones, T.A.1
Zou, J.Y.2
Cowan, S.W.3
Kjeldgaard, M.4
-
29
-
-
0030585191
-
Two structurally different RNA molecules are bound by the spliceosomal protein U1A using the same recognition strategy
-
Jovine, L, Oubridge, C., Avis, J.M., and Nagai, K. (1996). Two structurally different RNA molecules are bound by the spliceosomal protein U1A using the same recognition strategy. Structure 5, 621-631.
-
(1996)
Structure
, vol.5
, pp. 621-631
-
-
Jovine, L.1
Oubridge, C.2
Avis, J.M.3
Nagai, K.4
-
30
-
-
0025269273
-
Genomic organization and physical mapping of the transfer RNA genes in Escherichia coli K12
-
Komine, Y., Adachi, T., Inokuchi, H., and Ozeki, H. (1990). Genomic organization and physical mapping of the transfer RNA genes in Escherichia coli K12. J. Mol. Biol. 212, 579-598.
-
(1990)
J. Mol. Biol.
, vol.212
, pp. 579-598
-
-
Komine, Y.1
Adachi, T.2
Inokuchi, H.3
Ozeki, H.4
-
31
-
-
0001359519
-
TRNA: Structure, biosynthesis and function
-
D. Soil and U.L RajBhandary, eds. (Washington D.C.: ASM Press)
-
Meinnel, T., Mechulam, Y., and Blanquet, S. (1995). tRNA: structure, biosynthesis and function. In Aminoacyl-tRNA Synthetase: Occurrence, Structure, and Function, D. Soil and U.L RajBhandary, eds. (Washington D.C.: ASM Press), pp. 251-291.
-
(1995)
Aminoacyl-tRNA Synthetase: Occurrence, Structure, and Function
, pp. 251-291
-
-
Meinnel, T.1
Mechulam, Y.2
Blanquet, S.3
-
32
-
-
0028057108
-
Raster3D version 2.0: A program for realistic molecular graphics
-
Merrit, E., and Murphy, M. (1994). Raster3D version 2.0: a program for realistic molecular graphics. Acta Crystallgr. D 50, 869-873.
-
(1994)
Acta Crystallgr. D
, vol.50
, pp. 869-873
-
-
Merrit, E.1
Murphy, M.2
-
33
-
-
0025635930
-
Escherichia coli threonyl-tRNA synthetase and tRNA(Thr) modulate the binding of the ribosome to the translational initiation site of the thrS mRNA
-
Moine, H., Romby, P., Springer, M., Grunberg-Manago, M., Ebel, J.P., Ehresmann, B., and Ehresmann, C. (1990). Escherichia coli threonyl-tRNA synthetase and tRNA(Thr) modulate the binding of the ribosome to the translational initiation site of the thrS mRNA. J. Mol. Biol. 276, 299-310.
-
(1990)
J. Mol. Biol.
, vol.276
, pp. 299-310
-
-
Moine, H.1
Romby, P.2
Springer, M.3
Grunberg-Manago, M.4
Ebel, J.P.5
Ehresmann, B.6
Ehresmann, C.7
-
34
-
-
0026766983
-
Functional contacts of a transfer RNA synthetase with 2′-hydroxyl groups in the RNA minor groove
-
Musier-Forsyth, K., and Schimmel, P. (1992). Functional contacts of a transfer RNA synthetase with 2′-hydroxyl groups in the RNA minor groove. Nature 357, 513-515.
-
(1992)
Nature
, vol.357
, pp. 513-515
-
-
Musier-Forsyth, K.1
Schimmel, P.2
-
35
-
-
84986486656
-
A rapid finite difference algorithm utilizing successive over-relaxation to solve the Poisson-Boltzmann equation
-
Nicholls, A., and Honig, B. (1991). A rapid finite difference algorithm utilizing successive over-relaxation to solve the Poisson-Boltzmann equation. J. Comp. Chem. 72, 435-445.
-
(1991)
J. Comp. Chem.
, vol.72
, pp. 435-445
-
-
Nicholls, A.1
Honig, B.2
-
36
-
-
0027221150
-
Chemical modification and mutagenesis studies on zinc binding of aminoacyl-tRNA synthetases
-
Nureki, O., Kohno, T., Sakamoto, K., Miyazawa, T., and Yokoyama, S. (1993). Chemical modification and mutagenesis studies on zinc binding of aminoacyl-tRNA synthetases. J. Biol. Chem. 268, 15368-15373.
-
(1993)
J. Biol. Chem.
, vol.268
, pp. 15368-15373
-
-
Nureki, O.1
Kohno, T.2
Sakamoto, K.3
Miyazawa, T.4
Yokoyama, S.5
-
37
-
-
0032562571
-
Enzyme structure with two catalytic sites for doublesieve selection of substrate
-
Nureki, O., Vassylev, D.G., Tateno, M., Shimada, A., Nakama, T., Fukai, S., Konno, M., Hendrickson, T.L, Schimmel, P., and Yokoyama, S. (1998). Enzyme structure with two catalytic sites for doublesieve selection of substrate. Science 280, 578-582.
-
(1998)
Science
, vol.280
, pp. 578-582
-
-
Nureki, O.1
Vassylev, D.G.2
Tateno, M.3
Shimada, A.4
Nakama, T.5
Fukai, S.6
Konno, M.7
Hendrickson, T.L.8
Schimmel, P.9
Yokoyama, S.10
-
38
-
-
0023700973
-
Evidence for interaction of an aminoacyl transfer RNA synthetase with a region important for the identity of its cognate transfer RNA
-
Park, S.J., and Schimmel, P. (1988). Evidence for interaction of an aminoacyl transfer RNA synthetase with a region important for the identity of its cognate transfer RNA. J. Biol. Chem. 263, 16527-16530.
-
(1988)
J. Biol. Chem.
, vol.263
, pp. 16527-16530
-
-
Park, S.J.1
Schimmel, P.2
-
39
-
-
0026457064
-
Molecular mimicry in translational control of E. coli threonyl-tRNA synthetase gene. Competitive inhibition in tRNA aminoacylation and operator-repressor recognition switch using tRNA identity rules
-
Romby, P., Brunel, C., Caillet, J., Springer, M., Grunberg-Manago, M., Westhof, E., Ehresmann, C., and Ehresmann, B. (1992). Molecular mimicry in translational control of E. coli threonyl-tRNA synthetase gene. Competitive inhibition in tRNA aminoacylation and operator-repressor recognition switch using tRNA identity rules. Nucleic Acids Res. 20, 5633-5640.
-
(1992)
Nucleic Acids Res.
, vol.20
, pp. 5633-5640
-
-
Romby, P.1
Brunel, C.2
Caillet, J.3
Springer, M.4
Grunberg-Manago, M.5
Westhof, E.6
Ehresmann, C.7
Ehresmann, B.8
-
40
-
-
10344237522
-
The expression of E. coli threonyl-tRNA synthetase is regulated at the translational level by symmetrical operatorrepressor interactions
-
Romby, P., Caillet, J., Ebel, C., Sacerdot, C., Graffe, M., Eyermann, F., Brunel, C., Moine, H., Ehresmann, C., Ehresmann, B., and Springer, M. (1996). The expression of E. coli threonyl-tRNA synthetase is regulated at the translational level by symmetrical operatorrepressor interactions. EMBO J. 15, 5976-5987.
-
(1996)
EMBO J.
, vol.15
, pp. 5976-5987
-
-
Romby, P.1
Caillet, J.2
Ebel, C.3
Sacerdot, C.4
Graffe, M.5
Eyermann, F.6
Brunel, C.7
Moine, H.8
Ehresmann, C.9
Ehresmann, B.10
Springer, M.11
-
42
-
-
0026429275
-
Asp
-
Asp. Science 252, 1682-1689.
-
(1991)
Science
, vol.252
, pp. 1682-1689
-
-
Ruff, M.1
Krishnaswamy, S.2
Boeglin, M.3
Poterszman, A.4
Mitschler, A.5
Podjarny, A.6
Rees, B.7
Thierry, J.C.8
Moras, D.9
-
44
-
-
0031610693
-
A conserved domain within Aid p delivers tRNA to aminoacyl-tRNA synthetases
-
Simos, G., Sauer, A., Fasiolo, F., and Hurt, E.G. (1998). A conserved domain within Aid p delivers tRNA to aminoacyl-tRNA synthetases. Mol. Cell 1, 235-242.
-
(1998)
Mol. Cell
, vol.1
, pp. 235-242
-
-
Simos, G.1
Sauer, A.2
Fasiolo, F.3
Hurt, E.G.4
-
45
-
-
0022251303
-
Autogenous control of Escherichia coli threonyltRNA synthetase expression in vivo
-
Springer, M., Plumbridge, J.A., Butler, J.S., Graffe, M., Dondon, J., Mayaux, J.F., Fayat, G., Lestienne, P., Blanquet, S., and Grunberg-Manago, M. (1985). Autogenous control of Escherichia coli threonyltRNA synthetase expression in vivo. J. Mol. Biol. 185, 93-104.
-
(1985)
J. Mol. Biol.
, vol.185
, pp. 93-104
-
-
Springer, M.1
Plumbridge, J.A.2
Butler, J.S.3
Graffe, M.4
Dondon, J.5
Mayaux, J.F.6
Fayat, G.7
Lestienne, P.8
Blanquet, S.9
Grunberg-Manago, M.10
-
46
-
-
0024454753
-
TRNA-like structures and gene regulation at the translational level: A case of molecular mimicry in Escherichia coli
-
Springer, M., Graffe, M., Dondon, J., and Grunberg-Manago, M. (1989). tRNA-like structures and gene regulation at the translational level: a case of molecular mimicry in Escherichia coli. EMBO J. 8, 2417-2424.
-
(1989)
EMBO J.
, vol.8
, pp. 2417-2424
-
-
Springer, M.1
Graffe, M.2
Dondon, J.3
Grunberg-Manago, M.4
-
47
-
-
0023696299
-
Tertiary structure of Escherichia coli tRNA(3Thr) in solution and interaction of this tRNA with the cognate threonyl-tRNA synthetase
-
Theobald, A., Springer, M., Grunberg-Manago, M., Ebel, J.P., and Giegé, R. (1988). Tertiary structure of Escherichia coli tRNA(3Thr) in solution and interaction of this tRNA with the cognate threonyl-tRNA synthetase. Eur. J. Biochem. 775, 511-524.
-
(1988)
Eur. J. Biochem.
, vol.775
, pp. 511-524
-
-
Theobald, A.1
Springer, M.2
Grunberg-Manago, M.3
Ebel, J.P.4
Giegé, R.5
-
48
-
-
0019844454
-
Probing the principles of amino acid selection using the alanyl-tRNA synthetase from Escherichia coli
-
Tsui, W.C., and Fersht, A.R. (1981). Probing the principles of amino acid selection using the alanyl-tRNA synthetase from Escherichia coli. Nucleic Acids Res. 9, 4627-4637.
-
(1981)
Nucleic Acids Res.
, vol.9
, pp. 4627-4637
-
-
Tsui, W.C.1
Fersht, A.R.2
|