메뉴 건너뛰기




Volumn 8, Issue , 2007, Pages

Kernel-imbedded Gaussian processes for disease classification using microarray gene expression data

Author keywords

[No Author keywords available]

Indexed keywords

MACHINE LEARNING APPROACHES; MACHINE LEARNING METHODS; MICROARRAY DATA ANALYSIS; MICROARRAY GENE EXPRESSION DATA; MICROARRAY GENE EXPRESSION DATA ANALYSIS; MODEL SELECTION PROBLEM; PROBABILISTIC PREDICTION; STATE-OF-THE-ART METHODS;

EID: 33947380080     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-8-67     Document Type: Article
Times cited : (17)

References (33)
  • 2
    • 0035931968 scopus 로고    scopus 로고
    • Genome-Wide Views of Cancer
    • 10.1056/NEJM200102223440809 11207357
    • Golub TR Genome-Wide Views of Cancer N Engl J Med 2001 344 601-602 10.1056/NEJM200102223440809 11207357
    • (2001) N Engl J Med , vol.344 , pp. 601-602
    • Golub, T.R.1
  • 5
    • 84915425007 scopus 로고
    • Some comments on Cp
    • 10.2307/1267380
    • Mallows CL Some comments on Cp Technometrics 1973 15 661-676 10.2307/ 1267380
    • (1973) Technometrics , vol.15 , pp. 661-676
    • Mallows, C.L.1
  • 6
    • 0000501656 scopus 로고
    • Information theory and an extension of the maximum likelihood principle
    • Petrov BN, Csaki F
    • Akaike H Information theory and an extension of the maximum likelihood principle 2nd International Symposium on Information Theory Petrov BN, Csaki F 1973 267-281
    • (1973) 2nd International Symposium on Information Theory , pp. 267-281
    • Akaike, H.1
  • 7
    • 0000120766 scopus 로고
    • Estimation the dimension of a model
    • Schwarz G Estimation the dimension of a model Ann Statist 1978 6 461-464
    • (1978) Ann Statist , vol.6 , pp. 461-464
    • Schwarz, G.1
  • 8
    • 0001729472 scopus 로고    scopus 로고
    • Calibration and emperical Bayes variable selection
    • 10.1093/biomet/87.4.731
    • George EI Foster DP Calibration and emperical Bayes variable selection Biometrika 2000 87 731-747 10.1093/biomet/87.4.731
    • (2000) Biometrika , vol.87 , pp. 731-747
    • George, E.I.1    Foster, D.P.2
  • 9
    • 29144459062 scopus 로고    scopus 로고
    • Efficient Empirical Bayes Variable Selection and Estimation in Linear Models
    • 10.1198/016214505000000367
    • Yuan M Lin Y Efficient Empirical Bayes Variable Selection and Estimation in Linear Models J Amer Statis l Assoc 2005 100 1215-1225 10.1198/ 016214505000000367
    • (2005) J Amer Statis L Assoc , vol.100 , pp. 1215-1225
    • Yuan, M.1    Lin, Y.2
  • 10
    • 12244265090 scopus 로고    scopus 로고
    • Gene selection: A Bayesian variable selection approach
    • 10.1093/bioinformatics/19.1.90 12499298
    • Lee KE Sha N Dougherty ER Vannucci M Mallick BK Gene selection: A Bayesian variable selection approach Bioinformatics 2003 19 1 90-97 10.1093/bioinformatics/19.1.90 12499298
    • (2003) Bioinformatics , vol.19 , Issue.1 , pp. 90-97
    • Lee, K.E.1    Sha, N.2    Dougherty, E.R.3    Vannucci, M.4    Mallick, B.K.5
  • 11
    • 1542303735 scopus 로고    scopus 로고
    • Gene Prediction Using Multinomial Probit Regression with Bayesian Gene Selection
    • 10.1155/S1110865704309157
    • Zhou X Wang X Dougherty ER Gene Prediction Using Multinomial Probit Regression with Bayesian Gene Selection EURASIP Journal on Applied Signal Processing 2004 1 115-124 10.1155/S1110865704309157
    • (2004) EURASIP Journal on Applied Signal Processing , vol.1 , pp. 115-124
    • Zhou, X.1    Wang, X.2    Dougherty, E.R.3
  • 12
    • 4744364173 scopus 로고    scopus 로고
    • Cancer classification and prediction using logistic regression with Bayesian gene selection
    • 10.1016/j.jbi.2004.07.009 15465478
    • Zhou X Liu K Wong STC Cancer classification and prediction using logistic regression with Bayesian gene selection Journal of Biomedical Informatics 2004 37 249-259 10.1016/j.jbi.2004.07.009 15465478
    • (2004) Journal of Biomedical Informatics , vol.37 , pp. 249-259
    • Zhou, X.1    Liu, K.2    Wong, S.T.C.3
  • 13
    • 27744552855 scopus 로고    scopus 로고
    • Gene Selection using Logistic Regressions based on AIC, BIC and MDL Criteria
    • 10.1142/S179300570500007X
    • Zhou X Wang X Dougherty ER Gene Selection using Logistic Regressions based on AIC, BIC and MDL Criteria New Mathematics and Neural Computation 2005 1 129-145 10.1142/S179300570500007X
    • (2005) New Mathematics and Neural Computation , vol.1 , pp. 129-145
    • Zhou, X.1    Wang, X.2    Dougherty, E.R.3
  • 14
    • 1542637078 scopus 로고    scopus 로고
    • A Bayesian approach to non-linear probit gene selection and classification
    • 10.1016/j.jfranklin.2003.12.010
    • Zhou X Wang X Dougherty ER A Bayesian approach to non-linear probit gene selection and classification Journal of the Franklin Institute 2004 341 137-156 10.1016/j.jfranklin.2003.12.010
    • (2004) Journal of the Franklin Institute , vol.341 , pp. 137-156
    • Zhou, X.1    Wang, X.2    Dougherty, E.R.3
  • 15
    • 0037076272 scopus 로고    scopus 로고
    • Diagnosis of multiple cancer types by shrunken centroids of gene expression
    • 124443 12011421 10.1073/pnas.082099299
    • Tibshirani R Hastie T Narasimhan B Chu G Diagnosis of multiple cancer types by shrunken centroids of gene expression Proc Natl Acad Sci USA 2002 99 6567-6572 124443 12011421 10.1073/pnas.082099299
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 6567-6572
    • Tibshirani, R.1    Hastie, T.2    Narasimhan, B.3    Chu, G.4
  • 16
    • 12344294601 scopus 로고    scopus 로고
    • BagBoosting for tumor classification with gene expression data
    • 10.1093/bioinformatics/bth447 15466910
    • Dettling M BagBoosting for tumor classification with gene expression data Bioinformatics 2004 20 18 3583-3593 10.1093/bioinformatics/bth447 15466910
    • (2004) Bioinformatics , vol.20 , Issue.18 , pp. 3583-3593
    • Dettling, M.1
  • 17
    • 0036643043 scopus 로고    scopus 로고
    • Statistical Properties and Adaptive Tuning of Support Vector Machines
    • 10.1023/A:1013951620650
    • Lin Y Wahba G Zhang H Lee Y Statistical Properties and Adaptive Tuning of Support Vector Machines Machine Learning 2002 48 115-136 10.1023/ A:1013951620650
    • (2002) Machine Learning , vol.48 , pp. 115-136
    • Lin, Y.1    Wahba, G.2    Zhang, H.3    Lee, Y.4
  • 18
    • 0036258405 scopus 로고    scopus 로고
    • Support Vector Machines and The Bayes Rule in Classification
    • 10.1023/A:1015469627679
    • Lin Y Support Vector Machines and The Bayes Rule in Classification Data Mining and Knowledge Discovery 2002 6 259-275 10.1023/A:1015469627679
    • (2002) Data Mining and Knowledge Discovery , vol.6 , pp. 259-275
    • Lin, Y.1
  • 19
    • 0036161259 scopus 로고    scopus 로고
    • Gene selection for cancer classification using support vector machines
    • 10.1023/A:1012487302797
    • Guyon I Weston J Barnhill S Vapnik V Gene selection for cancer classification using support vector machines Machine Learning 2002 46 389-422 10.1023/A:1012487302797
    • (2002) Machine Learning , vol.46 , pp. 389-422
    • Guyon, I.1    Weston, J.2    Barnhill, S.3    Vapnik, V.4
  • 20
    • 15944424353 scopus 로고    scopus 로고
    • Kernel logistic regression and the import vector machine
    • 10.1198/106186005X25619
    • Zhu J Hastie T Kernel logistic regression and the import vector machine Journal of Computational and Graphical Statistics 2005 14 1 185-205 10.1198/106186005X25619
    • (2005) Journal of Computational and Graphical Statistics , vol.14 , Issue.1 , pp. 185-205
    • Zhu, J.1    Hastie, T.2
  • 21
    • 15944363312 scopus 로고    scopus 로고
    • Classification of Gene Microarrays by Penalized Logistic Regression
    • 10.1093/biostatistics/kxg046 15208204
    • Zhu J Hastie T Classification of Gene Microarrays by Penalized Logistic Regression Biostatistics 2004 5 3 427-443 10.1093/biostatistics/kxg046 15208204
    • (2004) Biostatistics , vol.5 , Issue.3 , pp. 427-443
    • Zhu, J.1    Hastie, T.2
  • 22
    • 0000234257 scopus 로고
    • The Evidence Framework Applied to Classification Networks
    • MacKay DJC The Evidence Framework Applied to Classification Networks Neural Computation 1992 4 5 720-736
    • (1992) Neural Computation , vol.4 , Issue.5 , pp. 720-736
    • MacKay, D.J.C.1
  • 23
    • 0034271876 scopus 로고    scopus 로고
    • The Evidence Framework Applied to Support Vector Machines
    • 10.1109/72.870047
    • Kwok JT The Evidence Framework Applied to Support Vector Machines IEEE Trans on Neural Networks 2000 11 1162-1173 10.1109/72.870047
    • (2000) IEEE Trans on Neural Networks , vol.11 , pp. 1162-1173
    • Kwok, J.T.1
  • 24
    • 0036582564 scopus 로고    scopus 로고
    • Bayesian framework for least-squares support vector machine classifiers, Gaussian processes, and kernel fisher discriminant analysis
    • 10.1162/089976602753633411 11972910
    • Gestel TV Suykens JVK Lanckriet G Lambrechts A Moor BD Vandewalle J Bayesian framework for least-squares support vector machine classifiers, Gaussian processes, and kernel fisher discriminant analysis Neural Computation 2002 14 5 1115-1147 10.1162/089976602753633411 11972910
    • (2002) Neural Computation , vol.14 , Issue.5 , pp. 1115-1147
    • Gestel, T.V.1    Suykens, J.V.K.2    Lanckriet, G.3    Lambrechts, A.4    Moor, B.D.5    Vandewalle, J.6
  • 27
    • 0034954414 scopus 로고    scopus 로고
    • Classification and diagnostic prediction of cancer using gene expression profiling and artificial neural networks
    • 1282521 11385503 10.1038/89044
    • Khan J Wei J Ringner M Saal L Ladanyi M Westermann F Berthold F Schwab M Antonescu C Classification and diagnostic prediction of cancer using gene expression profiling and artificial neural networks Nature Medicine 2001 7 6 673-679 1282521 11385503 10.1038/89044
    • (2001) Nature Medicine , vol.7 , Issue.6 , pp. 673-679
    • Khan, J.1    Wei, J.2    Ringner, M.3    Saal, L.4    Ladanyi, M.5    Westermann, F.6    Berthold, F.7    Schwab, M.8    Antonescu, C.9
  • 29
    • 2142732441 scopus 로고    scopus 로고
    • Large-Scale simultaneous hypothesis testing: The choice of a null hypothesis
    • 10.1198/016214504000000089
    • Efron B Large-Scale simultaneous hypothesis testing: The choice of a null hypothesis J Amer Statis l Assoc 2004 99 96-104 10.1198/ 016214504000000089
    • (2004) J Amer Statis L Assoc , vol.99 , pp. 96-104
    • Efron, B.1
  • 30
    • 0033536012 scopus 로고    scopus 로고
    • Broad patterns of gene expression revealed by clustering analysis of tumor and normal colon tissues probed by oligonucleotide arrays
    • 6745-6750 10.1073/pnas.96.12.6745
    • Alon U Barkai N Notterman D Gish K Mack S Levine J Broad patterns of gene expression revealed by clustering analysis of tumor and normal colon tissues probed by oligonucleotide arrays Proc Natural Academic Science USA 1999 96 6745-6750 10.1073/pnas.96.12.6745
    • (1999) Proc Natural Academic Science USA , vol.96 , pp. 6745-6750
    • Alon, U.1    Barkai, N.2    Notterman, D.3    Gish, K.4    Mack, S.5    Levine, J.6
  • 32
    • 0001153986 scopus 로고
    • Simulation of truncated normal variables
    • 10.1007/BF00143942
    • Robert C Simulation of truncated normal variables Statistics and Computing 1995 5 121-125 10.1007/BF00143942
    • (1995) Statistics and Computing , vol.5 , pp. 121-125
    • Robert, C.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.