DNA microarrays in clinical oncology

Journal of Clinical Oncology

Volumn 20, Issue 7, 2002, Pages 1932-1941

  Ramaswamy, Sridhar ^a   Golub, Todd R ^a  

^a WHITEHEAD INSTITUTE FOR BIOMEDICAL RESEARCH   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CELL DNA;

ARTICLE; CANCER; CANCER DIAGNOSIS; CANCER RESEARCH; CARCINOGENESIS; CLINICAL MEDICINE; DATA ANALYSIS; DNA MICROARRAY; GENE EXPRESSION; GENE FUNCTION; HUMAN; MARKER GENE; ONCOLOGY; PREDICTION; PRIORITY JOURNAL;

EID: 0036534202     PISSN: 0732183X     EISSN: None     Source Type: Journal    
DOI: 10.1200/JCO.2002.20.7.1932     Document Type: Article

References (65)

1. Chasing the cancer demon
2. Cancer genetics
3. A new consistent chromosomal abnormality in chronic myelogenous leukemia identified by quinacrine fluorescence and Giemsa staining
4. Efficacy and safety of a specific inhibitor of the BCR-ABL tyrosine kinase in chronic myeloid leukemia
5. Activity of a specific inhibitor of the BCR-ABL tyrosine kinase in the blast crisis of chronic myeloid leukemia and acute lymphoblastic leukemia with the Philadelphia chromosome
6. Genome changes and gene expression in human solid tumors
7. International Human Genome Sequencing Consortium: Initial sequencing and analysis of the human genome
8. The sequence of the human genome
9. Biomedical discovery with DNA arrays
10. Differential display of eukaryotic messenger RNA by means of the polymerase chain reaction
11. Serial analysis of gene expression
12. Suppression subtractive hybridization: A method for generating differentially regulated or tissue-specific cDNA probes and libraries
13. Molecular interactions on microarrays
14. Quantitative monitoring of gene expression patterns with a complementary DNA microarray
15. Expression monitoring by hybridization to high-density oligonucleotide arrays
16. Expression profiling using microarrays fabricated by an ink-jet oligonucleotide synthesizer
17. Effects of ischemia on gene expression
18. Laser capture microdissection
19. Alterations of gene expression during colorectal carcinogenesis revealed by cDNA microarrays after laser-capture microdissection of tumor tissues and normal epithelia
20. Importance of replication in microarray gene expression studies: Statistical methods and evidence from replicative cDNA hybridizations
21. Data management and analysis for gene expression arrays
22. Computational analysis of microarray data
23. Cluster analysis and display of genome-wide expression patterns
24. Interpreting patterns of gene expression with self-organizing maps: Methods and applications to hematopoietic differentiation
25. Molecular classification of cancer: Class discovery and class prediction by gene expression monitoring
26. Significance analysis of microarrays applied to the ionizing radiation response
27. In vivo gene expression profile analysis of human breast cancer progression
28. Identification of gene expression patterns in superficial and invasive human bladder cancer
29. Transcriptional gene expression profiles of colorectal adenoma, adenocarcinoma, and normal tissue examined by oligonucleotide microarrays
30. Expression profiling reveals fundamental biological differences in acute myeloid leukemia with isolated trisomy 8 and normal cytogenetics
31. Analysis of gene expression profiles in normal and neoplastic ovarian tissue samples identifies candidate molecular markers of epithelial ovarian cancer
32. Genome-wide analysis of gene expression in human hepatocellular carcinomas using cDNA microarray: Identification of genes involved in viral carcinogenesis and tumor progression
33. Gene expression profiling with oligonucleotide microarrays distinguishes World Health Organization grade of oligodendrogliomas
34. CDNA microarray gene expression analysis of B-cell chronic lymphocytic leukemia proposes potential new prognostic markers involved in lymphocyte traficking
35. Identification of differentially expressed genes in human gliomas by DNA microarray and tissue chip techniques
36. Gene expression profiling of low-grade diffuse astrocytomas by cDNA arrays
37. Gene expression profiles of human endometrial cancer samples using a cDNA-expression array technique: Assessment of an analysis method
38. Gene expression profiling of alveolar rhabdomyosarcoma with cDNA microarrays
39. Distinctive molecular profiles of high-grade and low-grade gliomas based on oligonucleotide microarray analysis
40. Molecular classification of cancer: Class discovery and class prediction by gene expression monitoring
41. MLL translocations specify a distinct gene expression profile that distinguishes a unique leukemia
42. Molecular classification of cutaneous malignant melanoma by gene expression profiling
43. Molecular portraits of human breast tumors
44. Gene expression patterns of breast carcinomas distinguish tumor subclasses with clinical implications
45. Gene-expression profiles in hereditary breast cancer
46. A uniform approach to molecular cancer diagnosis using tumor gene expression signatures
47. Molecular classification of human carcinomas by use of gene expression signatures
48. Classification and diagnostic prediction of cancers using gene expression profiling and artificial neural networks
49. The hallmarks of cancer
50. A gene expression database for the molecular pharmacology of cancer
51. Chemosensitivity prediction by gene expression profiling in cancer cell lines
52. Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling
53. Diffuse large B-cell lymphoma outcome prediction by gene-expression profiling and supervised machine learning
54. Gene expression profiling of clear cell renal cell carcinoma: Gene identification and prognostic classification
55. Predicting clinical status of human breast cancer by using gene expression profiles
56. Classification of human lung carcinomas by mRNA expression profiling reveals distinct adenocarcinoma subclasses
57. Diversity of gene expression in adenocarcinomas of the lung
58. Delineation of prognostic biomarkers in prostate cancer
59. Classification and outcome prediction of embryonal tumors of the central nervous system
60. Expression of the neurotrophin receptor TrkC is linked to a favorable outcome in medulloblastoma
61. Expression profiling of medulloblastoma: PDGFRA and the RAS/MAPK pathway as therapeutic targets for metastatic disease
62. High resolution analysis of DNA copy number variation using comparative genomic hybridization to microarrays
63. Tissue microarrays for high-throughput molecular profiling of tumor specimens
64. Integrated genomic and proteomic analysis of a systematically perturbed metabolic network
65. Comprehensive copy number and gene expression profiling of the 17q23 amplicon in human breast cancer