-
1
-
-
0035137666
-
Critical role for the histone H4 N terminus in nucleosome remodeling by ISWI
-
Clapier C.R., Langst G., Corona D.F., Becker P.B., and Nightingale K.P. Critical role for the histone H4 N terminus in nucleosome remodeling by ISWI. Mol. Cell. Biol. 21 (2001) 875-883
-
(2001)
Mol. Cell. Biol.
, vol.21
, pp. 875-883
-
-
Clapier, C.R.1
Langst, G.2
Corona, D.F.3
Becker, P.B.4
Nightingale, K.P.5
-
2
-
-
0036464569
-
A critical epitope for substrate recognition by the nucleosome remodeling ATPase ISWI
-
Clapier C.R., Nightingale K.P., and Becker P.B. A critical epitope for substrate recognition by the nucleosome remodeling ATPase ISWI. Nucleic Acids Res. 30 (2002) 649-655
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 649-655
-
-
Clapier, C.R.1
Nightingale, K.P.2
Becker, P.B.3
-
3
-
-
31644449378
-
Mapping post-translational modifications of the histone variant MacroH2A1 using tandem mass spectrometry
-
Chu F., Nusinow D.A., Chalkley R.J., Plath K., Panning B., and Burlingame A.L. Mapping post-translational modifications of the histone variant MacroH2A1 using tandem mass spectrometry. Mol. Cell. Proteomics 5 (2006) 194-203
-
(2006)
Mol. Cell. Proteomics
, vol.5
, pp. 194-203
-
-
Chu, F.1
Nusinow, D.A.2
Chalkley, R.J.3
Plath, K.4
Panning, B.5
Burlingame, A.L.6
-
4
-
-
0021100690
-
Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei
-
Dignam J.D., Lebovitz R.M., and Roeder R.G. Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei. Nucleic Acids Res. 11 (1983) 1475-1489
-
(1983)
Nucleic Acids Res.
, vol.11
, pp. 1475-1489
-
-
Dignam, J.D.1
Lebovitz, R.M.2
Roeder, R.G.3
-
6
-
-
0035898615
-
Acf1, the largest subunit of CHRAC, regulates ISWI-induced nucleosome remodelling
-
Eberharter A., Ferrari S., Langst G., Straub T., Imhof A., Varga-Weisz P., Wilm M., and Becker P.B. Acf1, the largest subunit of CHRAC, regulates ISWI-induced nucleosome remodelling. EMBO J. 20 (2001) 3781-3788
-
(2001)
EMBO J.
, vol.20
, pp. 3781-3788
-
-
Eberharter, A.1
Ferrari, S.2
Langst, G.3
Straub, T.4
Imhof, A.5
Varga-Weisz, P.6
Wilm, M.7
Becker, P.B.8
-
7
-
-
0043127085
-
Molecular basis for the discrimination of repressive methyl-lysine marks in histone H3 by Polycomb and HP1 chromodomains
-
Fischle W., Wang Y., Jacobs S.A., Kim Y., Allis C.D., and Khorasanizadeh S. Molecular basis for the discrimination of repressive methyl-lysine marks in histone H3 by Polycomb and HP1 chromodomains. Genes Dev. 17 (2003) 1870-1881
-
(2003)
Genes Dev.
, vol.17
, pp. 1870-1881
-
-
Fischle, W.1
Wang, Y.2
Jacobs, S.A.3
Kim, Y.4
Allis, C.D.5
Khorasanizadeh, S.6
-
8
-
-
0028908425
-
Decreasing the basicity of the active site base, Lys-258, of Escherichia coli aspartate aminotransferase by replacement with gamma-thialysine
-
Gloss L.M., and Kirsch J.F. Decreasing the basicity of the active site base, Lys-258, of Escherichia coli aspartate aminotransferase by replacement with gamma-thialysine. Biochemistry 34 (1995) 3990-3998
-
(1995)
Biochemistry
, vol.34
, pp. 3990-3998
-
-
Gloss, L.M.1
Kirsch, J.F.2
-
9
-
-
0042528729
-
Heterochromatin and epigenetic control of gene expression
-
Grewal S.I., and Moazed D. Heterochromatin and epigenetic control of gene expression. Science 301 (2003) 798-802
-
(2003)
Science
, vol.301
, pp. 798-802
-
-
Grewal, S.I.1
Moazed, D.2
-
10
-
-
0035807901
-
Histone tails modulate nucleosome mobility and regulate ATP-dependent nucleosome sliding by NURF
-
Hamiche A., Kang J.G., Dennis C., Xiao H., and Wu C. Histone tails modulate nucleosome mobility and regulate ATP-dependent nucleosome sliding by NURF. Proc. Natl. Acad. Sci. USA 98 (2001) 14316-14321
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 14316-14321
-
-
Hamiche, A.1
Kang, J.G.2
Dennis, C.3
Xiao, H.4
Wu, C.5
-
11
-
-
0142123130
-
Facile synthesis of site-specifically acetylated and methylated histone proteins: reagents for evaluation of the histone code hypothesis
-
He S., Bauman D., Davis J.S., Loyola A., Nishioka K., Gronlund J.L., Reinberg D., Meng F., Kelleher N., and McCafferty D.G. Facile synthesis of site-specifically acetylated and methylated histone proteins: reagents for evaluation of the histone code hypothesis. Proc. Natl. Acad. Sci. USA 100 (2003) 12033-12038
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 12033-12038
-
-
He, S.1
Bauman, D.2
Davis, J.S.3
Loyola, A.4
Nishioka, K.5
Gronlund, J.L.6
Reinberg, D.7
Meng, F.8
Kelleher, N.9
McCafferty, D.G.10
-
13
-
-
27644571230
-
Aminoethylation in model peptides reveals conditions for maximizing thiol specificity
-
Hopkins C.E., Hernandez G., Lee J.P., and Tolan D.R. Aminoethylation in model peptides reveals conditions for maximizing thiol specificity. Arch. Biochem. Biophys. 443 (2005) 1-10
-
(2005)
Arch. Biochem. Biophys.
, vol.443
, pp. 1-10
-
-
Hopkins, C.E.1
Hernandez, G.2
Lee, J.P.3
Tolan, D.R.4
-
14
-
-
0015501477
-
4-Thialaminine, a strongly basic chemical modification of cysteine
-
Itano H.A., and Robinson E.A. 4-Thialaminine, a strongly basic chemical modification of cysteine. J. Biol. Chem. 247 (1972) 4819-4824
-
(1972)
J. Biol. Chem.
, vol.247
, pp. 4819-4824
-
-
Itano, H.A.1
Robinson, E.A.2
-
15
-
-
0031865511
-
The chromo and SET domains of the Clr4 protein are essential for silencing in fission yeast
-
Ivanova A.V., Bonaduce M.J., Ivanov S.V., and Klar A.J. The chromo and SET domains of the Clr4 protein are essential for silencing in fission yeast. Nat. Genet. 19 (1998) 192-195
-
(1998)
Nat. Genet.
, vol.19
, pp. 192-195
-
-
Ivanova, A.V.1
Bonaduce, M.J.2
Ivanov, S.V.3
Klar, A.J.4
-
16
-
-
0037086355
-
Structure of HP1 chromodomain bound to a lysine 9-methylated histone H3 tail
-
Jacobs S.A., and Khorasanizadeh S. Structure of HP1 chromodomain bound to a lysine 9-methylated histone H3 tail. Science 295 (2002) 2080-2083
-
(2002)
Science
, vol.295
, pp. 2080-2083
-
-
Jacobs, S.A.1
Khorasanizadeh, S.2
-
18
-
-
0037672689
-
An epigenetic road map for histone lysine methylation
-
Lachner M., O'Sullivan R.J., and Jenuwein T. An epigenetic road map for histone lysine methylation. J. Cell Sci. 116 (2003) 2117-2124
-
(2003)
J. Cell Sci.
, vol.116
, pp. 2117-2124
-
-
Lachner, M.1
O'Sullivan, R.J.2
Jenuwein, T.3
-
20
-
-
33745809637
-
Molecular basis for site-specific read-out of histone H3K4me3 by the BPTF PHD finger of NURF
-
Li H., Ilin S., Wang W., Duncan E.M., Wysocka J., Allis C.D., and Patel D.J. Molecular basis for site-specific read-out of histone H3K4me3 by the BPTF PHD finger of NURF. Nature 442 (2006) 91-95
-
(2006)
Nature
, vol.442
, pp. 91-95
-
-
Li, H.1
Ilin, S.2
Wang, W.3
Duncan, E.M.4
Wysocka, J.5
Allis, C.D.6
Patel, D.J.7
-
21
-
-
9144260620
-
Dual histone H3 methylation marks at lysines 9 and 27 required for interaction with CHROMOMETHYLASE3
-
Lindroth A.M., Shultis D., Jasencakova Z., Fuchs J., Johnson L., Schubert D., Patnaik D., Pradhan S., Goodrich J., Schubert I., et al. Dual histone H3 methylation marks at lysines 9 and 27 required for interaction with CHROMOMETHYLASE3. EMBO J. 23 (2004) 4286-4296
-
(2004)
EMBO J.
, vol.23
, pp. 4286-4296
-
-
Lindroth, A.M.1
Shultis, D.2
Jasencakova, Z.3
Fuchs, J.4
Johnson, L.5
Schubert, D.6
Patnaik, D.7
Pradhan, S.8
Goodrich, J.9
Schubert, I.10
-
22
-
-
0032512794
-
New DNA sequence rules for high affinity binding to histone octamer and sequence-directed nucleosome positioning
-
Lowary P.T., and Widom J. New DNA sequence rules for high affinity binding to histone octamer and sequence-directed nucleosome positioning. J. Mol. Biol. 276 (1998) 19-42
-
(1998)
J. Mol. Biol.
, vol.276
, pp. 19-42
-
-
Lowary, P.T.1
Widom, J.2
-
23
-
-
0031587289
-
Characterization of nucleosome core particles containing histone proteins made in bacteria
-
Luger K., Rechsteiner T.J., Flaus A.J., Waye M.M., and Richmond T.J. Characterization of nucleosome core particles containing histone proteins made in bacteria. J. Mol. Biol. 272 (1997) 301-311
-
(1997)
J. Mol. Biol.
, vol.272
, pp. 301-311
-
-
Luger, K.1
Rechsteiner, T.J.2
Flaus, A.J.3
Waye, M.M.4
Richmond, T.J.5
-
24
-
-
0033039285
-
Preparation of nucleosome core particle from recombinant histones
-
Luger K., Rechsteiner T.J., and Richmond T.J. Preparation of nucleosome core particle from recombinant histones. Methods Enzymol. 304 (1999) 3-19
-
(1999)
Methods Enzymol.
, vol.304
, pp. 3-19
-
-
Luger, K.1
Rechsteiner, T.J.2
Richmond, T.J.3
-
25
-
-
27644589675
-
The diverse functions of histone lysine methylation
-
Martin C., and Zhang Y. The diverse functions of histone lysine methylation. Nat. Rev. Mol. Cell Biol. 6 (2005) 838-849
-
(2005)
Nat. Rev. Mol. Cell Biol.
, vol.6
, pp. 838-849
-
-
Martin, C.1
Zhang, Y.2
-
26
-
-
0014301121
-
Reductive alkylation of amino groups in proteins
-
Means G.E., and Feeney R.E. Reductive alkylation of amino groups in proteins. Biochemistry 7 (1968) 2192-2201
-
(1968)
Biochemistry
, vol.7
, pp. 2192-2201
-
-
Means, G.E.1
Feeney, R.E.2
-
27
-
-
0041624288
-
Structural basis for specific binding of Polycomb chromodomain to histone H3 methylated at Lys 27
-
Min J., Zhang Y., and Xu R.M. Structural basis for specific binding of Polycomb chromodomain to histone H3 methylated at Lys 27. Genes Dev. 17 (2003) 1823-1828
-
(2003)
Genes Dev.
, vol.17
, pp. 1823-1828
-
-
Min, J.1
Zhang, Y.2
Xu, R.M.3
-
28
-
-
33744529377
-
Protein ligation: an enabling technology for the biophysical analysis of proteins
-
Muralidharan V., and Muir T.W. Protein ligation: an enabling technology for the biophysical analysis of proteins. Nat. Methods 3 (2006) 429-438
-
(2006)
Nat. Methods
, vol.3
, pp. 429-438
-
-
Muralidharan, V.1
Muir, T.W.2
-
29
-
-
0035815360
-
Role of histone H3 lysine 9 methylation in epigenetic control of heterochromatin assembly
-
Nakayama J., Rice J.C., Strahl B.D., Allis C.D., and Grewal S.I. Role of histone H3 lysine 9 methylation in epigenetic control of heterochromatin assembly. Science 292 (2001) 110-113
-
(2001)
Science
, vol.292
, pp. 110-113
-
-
Nakayama, J.1
Rice, J.C.2
Strahl, B.D.3
Allis, C.D.4
Grewal, S.I.5
-
30
-
-
17644410781
-
Nucleosome binding and histone methyltransferase activity of Drosophila PRC2
-
Nekrasov M., Wild B., and Muller J. Nucleosome binding and histone methyltransferase activity of Drosophila PRC2. EMBO Rep. 6 (2005) 348-353
-
(2005)
EMBO Rep.
, vol.6
, pp. 348-353
-
-
Nekrasov, M.1
Wild, B.2
Muller, J.3
-
31
-
-
33745818717
-
Molecular mechanism of histone H3K4me3 recognition by plant homeodomain of ING2
-
Pena P.V., Davrazou F., Shi X., Walter K.L., Verkhusha V.V., Gozani O., Zhao R., and Kutateladze T.G. Molecular mechanism of histone H3K4me3 recognition by plant homeodomain of ING2. Nature 442 (2006) 100-103
-
(2006)
Nature
, vol.442
, pp. 100-103
-
-
Pena, P.V.1
Davrazou, F.2
Shi, X.3
Walter, K.L.4
Verkhusha, V.V.5
Gozani, O.6
Zhao, R.7
Kutateladze, T.G.8
-
32
-
-
0014010956
-
On aminoethylation of proteins
-
Raftery M.A., and Cole R.D. On aminoethylation of proteins. J. Biol. Chem. 241 (1966) 3457-3461
-
(1966)
J. Biol. Chem.
, vol.241
, pp. 3457-3461
-
-
Raftery, M.A.1
Cole, R.D.2
-
33
-
-
0034632829
-
Regulation of chromatin structure by site-specific histone H3 methyltransferases
-
Rea S., Eisenhaber F., O'Carroll D., Strahl B.D., Sun Z.W., Schmid M., Opravil S., Mechtler K., Ponting C.P., Allis C.D., and Jenuwein T. Regulation of chromatin structure by site-specific histone H3 methyltransferases. Nature 406 (2000) 593-599
-
(2000)
Nature
, vol.406
, pp. 593-599
-
-
Rea, S.1
Eisenhaber, F.2
O'Carroll, D.3
Strahl, B.D.4
Sun, Z.W.5
Schmid, M.6
Opravil, S.7
Mechtler, K.8
Ponting, C.P.9
Allis, C.D.10
Jenuwein, T.11
-
34
-
-
0037179716
-
Active genes are tri-methylated at K4 of histone H3
-
Santos-Rosa H., Schneider R., Bannister A.J., Sherriff J., Bernstein B.E., Emre N.C., Schreiber S.L., Mellor J., and Kouzarides T. Active genes are tri-methylated at K4 of histone H3. Nature 419 (2002) 407-411
-
(2002)
Nature
, vol.419
, pp. 407-411
-
-
Santos-Rosa, H.1
Schneider, R.2
Bannister, A.J.3
Sherriff, J.4
Bernstein, B.E.5
Emre, N.C.6
Schreiber, S.L.7
Mellor, J.8
Kouzarides, T.9
-
35
-
-
33745868054
-
ING2 PHD domain links histone H3 lysine 4 methylation to active gene repression
-
Shi X., Hong T., Walter K.L., Ewalt M., Michishita E., Hung T., Carney D., Pena P., Lan F., Kaadige M.R., et al. ING2 PHD domain links histone H3 lysine 4 methylation to active gene repression. Nature 442 (2006) 96-99
-
(2006)
Nature
, vol.442
, pp. 96-99
-
-
Shi, X.1
Hong, T.2
Walter, K.L.3
Ewalt, M.4
Michishita, E.5
Hung, T.6
Carney, D.7
Pena, P.8
Lan, F.9
Kaadige, M.R.10
-
36
-
-
32444434989
-
Histone H4-K16 acetylation controls chromatin structure and protein interactions
-
Shogren-Knaak M., Ishii H., Sun J.M., Pazin M.J., Davie J.R., and Peterson C.L. Histone H4-K16 acetylation controls chromatin structure and protein interactions. Science 311 (2006) 844-847
-
(2006)
Science
, vol.311
, pp. 844-847
-
-
Shogren-Knaak, M.1
Ishii, H.2
Sun, J.M.3
Pazin, M.J.4
Davie, J.R.5
Peterson, C.L.6
-
37
-
-
1642453558
-
Creating designer histones by native chemical ligation
-
Shogren-Knaak M.A., and Peterson C.L. Creating designer histones by native chemical ligation. Methods Enzymol. 375 (2004) 62-76
-
(2004)
Methods Enzymol.
, vol.375
, pp. 62-76
-
-
Shogren-Knaak, M.A.1
Peterson, C.L.2
-
38
-
-
0038047672
-
A native peptide ligation strategy for deciphering nucleosomal histone modifications
-
Shogren-Knaak M.A., Fry C.J., and Peterson C.L. A native peptide ligation strategy for deciphering nucleosomal histone modifications. J. Biol. Chem. 278 (2003) 15744-15748
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 15744-15748
-
-
Shogren-Knaak, M.A.1
Fry, C.J.2
Peterson, C.L.3
-
39
-
-
0242348752
-
Histone lysine methylation: a signature for chromatin function
-
Sims III R.J., Nishioka K., and Reinberg D. Histone lysine methylation: a signature for chromatin function. Trends Genet. 19 (2003) 629-639
-
(2003)
Trends Genet.
, vol.19
, pp. 629-639
-
-
Sims III, R.J.1
Nishioka, K.2
Reinberg, D.3
-
40
-
-
26944433102
-
A 'loop recapture' mechanism for ACF-dependent nucleosome remodeling
-
Strohner R., Wachsmuth M., Dachauer K., Mazurkiewicz J., Hochstatter J., Rippe K., and Langst G. A 'loop recapture' mechanism for ACF-dependent nucleosome remodeling. Nat. Struct. Mol. Biol. 12 (2005) 683-690
-
(2005)
Nat. Struct. Mol. Biol.
, vol.12
, pp. 683-690
-
-
Strohner, R.1
Wachsmuth, M.2
Dachauer, K.3
Mazurkiewicz, J.4
Hochstatter, J.5
Rippe, K.6
Langst, G.7
-
41
-
-
0037693853
-
Trimethylated lysine 9 of histone H3 is a mark for DNA methylation in Neurospora crassa
-
Tamaru H., Zhang X., McMillen D., Singh P.B., Nakayama J., Grewal S.I., Allis C.D., Cheng X., and Selker E.U. Trimethylated lysine 9 of histone H3 is a mark for DNA methylation in Neurospora crassa. Nat. Genet. 34 (2003) 75-79
-
(2003)
Nat. Genet.
, vol.34
, pp. 75-79
-
-
Tamaru, H.1
Zhang, X.2
McMillen, D.3
Singh, P.B.4
Nakayama, J.5
Grewal, S.I.6
Allis, C.D.7
Cheng, X.8
Selker, E.U.9
-
42
-
-
15044358494
-
Reading signals on the nucleosome with a new nomenclature for modified histones
-
Turner B.M. Reading signals on the nucleosome with a new nomenclature for modified histones. Nat. Struct. Mol. Biol. 12 (2005) 110-112
-
(2005)
Nat. Struct. Mol. Biol.
, vol.12
, pp. 110-112
-
-
Turner, B.M.1
-
43
-
-
33745839365
-
A PHD finger of NURF couples histone H3 lysine 4 trimethylation with chromatin remodelling
-
Wysocka J., Swigut T., Xiao H., Milne T.A., Kwon S.Y., Landry J., Kauer M., Tackett A.J., Chait B.T., Badenhorst P., et al. A PHD finger of NURF couples histone H3 lysine 4 trimethylation with chromatin remodelling. Nature 442 (2006) 86-90
-
(2006)
Nature
, vol.442
, pp. 86-90
-
-
Wysocka, J.1
Swigut, T.2
Xiao, H.3
Milne, T.A.4
Kwon, S.Y.5
Landry, J.6
Kauer, M.7
Tackett, A.J.8
Chait, B.T.9
Badenhorst, P.10
-
44
-
-
33845356072
-
The chromatin-remodeling enzyme ACF is an ATP-dependent DNA length sensor that regulates nucleosome spacing
-
Yang J.G., Madrid T.S., Sevastopoulos E., and Narlikar G.J. The chromatin-remodeling enzyme ACF is an ATP-dependent DNA length sensor that regulates nucleosome spacing. Nat. Struct. Mol. Biol. 13 (2006) 1078-1083
-
(2006)
Nat. Struct. Mol. Biol.
, vol.13
, pp. 1078-1083
-
-
Yang, J.G.1
Madrid, T.S.2
Sevastopoulos, E.3
Narlikar, G.J.4
-
45
-
-
0000944563
-
Electron capture dissociation of multiply charged protein cations. A nonergodic process
-
Zubarev R.A., Kelleher N.L., and McLafferty F.W. Electron capture dissociation of multiply charged protein cations. A nonergodic process. J. Am. Chem. Soc. 120 (1998) 3265-3266
-
(1998)
J. Am. Chem. Soc.
, vol.120
, pp. 3265-3266
-
-
Zubarev, R.A.1
Kelleher, N.L.2
McLafferty, F.W.3
|