-
1
-
-
0002622056
-
Unraveling the Molecular Pathway from Sunlight to Skin Cancer
-
Taylor, J. S. (1994) Unraveling the Molecular Pathway from Sunlight to Skin Cancer, Acc. Chem. Res. 27, 76-82.
-
(1994)
Acc. Chem. Res.
, vol.27
, pp. 76-82
-
-
Taylor, J.S.1
-
2
-
-
0028117141
-
Structure and Function of DNA Photolyase
-
Sancar, A. (1994) Structure and Function of DNA Photolyase, Biochemistry 33, 2-9.
-
(1994)
Biochemistry
, vol.33
, pp. 2-9
-
-
Sancar, A.1
-
3
-
-
0000177002
-
The Photochemistry of Nucleic Acids
-
(Morrison, H., Ed.), Wiley, New York
-
Cadet, J., and Vigny, P. (1990) The Photochemistry of Nucleic Acids, in Bioorganic Chemistry (Morrison, H., Ed.) pp 1-272, Wiley, New York.
-
(1990)
Bioorganic Chemistry
, pp. 1-272
-
-
Cadet, J.1
Vigny, P.2
-
4
-
-
0034625306
-
The DNA damage spectrum produced by simulated sunlight
-
Yoon, J. H., Lee, C. S., O'Connor, T. R., Yasui, A., and Pfeifer, G. P. (2000) The DNA damage spectrum produced by simulated sunlight, J. Mol. Biol. 299, 681-93.
-
(2000)
J. Mol. Biol.
, vol.299
, pp. 681-693
-
-
Yoon, J.H.1
Lee, C.S.2
O'Connor, T.R.3
Yasui, A.4
Pfeifer, G.P.5
-
5
-
-
0035977005
-
Cyclobutane pyrimidine dimers are responsible for the vast majority of mutations induced by UVB irradiation in mammalian cells
-
You, Y.-H., Lee, D.-H., Yoon, J.-H., Nakajima, S., Yasui, A., and Pfeifer, G. P. (2001) Cyclobutane pyrimidine dimers are responsible for the vast majority of mutations induced by UVB irradiation in mammalian cells, J. Biol. Chem. 276, 44688-94.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 44688-44694
-
-
You, Y.-H.1
Lee, D.-H.2
Yoon, J.-H.3
Nakajima, S.4
Yasui, A.5
Pfeifer, G.P.6
-
6
-
-
0000574962
-
Photoenzymes: A Novel Class of Biological Catalysts
-
Begley, T. P. (1994) Photoenzymes: A Novel Class of Biological Catalysts, Acc. Chem. Res. 27, 394-401.
-
(1994)
Acc. Chem. Res.
, vol.27
, pp. 394-401
-
-
Begley, T.P.1
-
7
-
-
0028863468
-
Atomic model of a pyrimidine dimer excision repair enzyme complexed with a DNA substrate: Structural basis for damaged DNA recognition
-
Vassylyev, D. G., Kashiwagi, T., Mikami, Y., Ariyoshi, M., Iwai, S., Ohtsuka, E., and Morikawa, K. (1995) Atomic model of a pyrimidine dimer excision repair enzyme complexed with a DNA substrate: Structural basis for damaged DNA recognition, Cell 83, 773-82.
-
(1995)
Cell
, vol.83
, pp. 773-782
-
-
Vassylyev, D.G.1
Kashiwagi, T.2
Mikami, Y.3
Ariyoshi, M.4
Iwai, S.5
Ohtsuka, E.6
Morikawa, K.7
-
8
-
-
17444362242
-
How does a cell repair damaged DNA?
-
Sharova, N. P. (2005) How does a cell repair damaged DNA? Biochemistry (Moscow) 70, 275-91.
-
(2005)
Biochemistry (Moscow)
, vol.70
, pp. 275-291
-
-
Sharova, N.P.1
-
9
-
-
0142059994
-
Recognition and repair of the cyclobutane thymine dimer, a major cause of skin cancers, by the human excision nuclease
-
Reardon Joyce, T., and Sancar, A. (2003) Recognition and repair of the cyclobutane thymine dimer, a major cause of skin cancers, by the human excision nuclease, Genes Dev. 17, 2539-51.
-
(2003)
Genes Dev.
, vol.17
, pp. 2539-2551
-
-
Reardon Joyce, T.1
Sancar, A.2
-
10
-
-
0038305458
-
Structure and function of DNA photolyase and cryptochrome blue-light photoreceptors
-
Sancar, A. (2003) Structure and function of DNA photolyase and cryptochrome blue-light photoreceptors, Chem. Rev. 103, 2203-37.
-
(2003)
Chem. Rev.
, vol.103
, pp. 2203-2237
-
-
Sancar, A.1
-
11
-
-
0021755617
-
Identification of a neutral flavin radical and characterization of a second chromophore in Escherichia coli DNA photolyase
-
Jorns, M. S., Sancar, G. B., and Sancar, A. (1984) Identification of a neutral flavin radical and characterization of a second chromophore in Escherichia coli DNA photolyase, Biochemistry 23, 2673-9.
-
(1984)
Biochemistry
, vol.23
, pp. 2673-2679
-
-
Jorns, M.S.1
Sancar, G.B.2
Sancar, A.3
-
12
-
-
0026334916
-
Determination of rates and yields of interchromophore (folate → flavin) energy transfer and intermolecular (flavin → DNA) electron transfer in Escherichia coli photolyase by time-resolved fluorescence and absorption spectroscopy
-
Kim, S. T., Heelis, P. F., Okamura, T., Hirata, Y., Malaga, N., and Sancar, A. (1991) Determination of rates and yields of interchromophore (folate → flavin) energy transfer and intermolecular (flavin → DNA) electron transfer in Escherichia coli photolyase by time-resolved fluorescence and absorption spectroscopy, Biochemistry 30, 11262-70.
-
(1991)
Biochemistry
, vol.30
, pp. 11262-11270
-
-
Kim, S.T.1
Heelis, P.F.2
Okamura, T.3
Hirata, Y.4
Malaga, N.5
Sancar, A.6
-
13
-
-
0030700313
-
Substrate and temperature dependence of DNA photolyase repair activity examined with ultrafast spectroscopy
-
Langenbacher, T., Zhao, X. D., Bieser, G., Heelis, P. F., Sancar, A., and Michel Beyerle, M. E. (1997) Substrate and temperature dependence of DNA photolyase repair activity examined with ultrafast spectroscopy, J. Am. Chem. Soc. 119, 10532-6.
-
(1997)
J. Am. Chem. Soc.
, vol.119
, pp. 10532-10536
-
-
Langenbacher, T.1
Zhao, X.D.2
Bieser, G.3
Heelis, P.F.4
Sancar, A.5
Michel Beyerle, M.E.6
-
14
-
-
0038116610
-
Cis-syn thymidine dimer repair by DNA photolyase in real time
-
MacFarlane, A. W., IV, and Stanley, R. J. (2003) Cis-syn thymidine dimer repair by DNA photolyase in real time, Biochemistry 42, 8558-68.
-
(2003)
Biochemistry
, vol.42
, pp. 8558-8568
-
-
MacFarlane IV, A.W.1
Stanley, R.J.2
-
15
-
-
28044469667
-
Direct observation of thymine dimer repair in DNA by photolyase
-
Kao, Y.-T., Saxena, C., Wang, L., Sancar, A., and Zhong, D. (2005) Direct observation of thymine dimer repair in DNA by photolyase, Proc. Natl. Acad. Sci. U.S.A. 102, 16128-32.
-
(2005)
Proc. Natl. Acad. Sci. U.S.A.
, vol.102
, pp. 16128-16132
-
-
Kao, Y.-T.1
Saxena, C.2
Wang, L.3
Sancar, A.4
Zhong, D.5
-
16
-
-
0029068245
-
On base flipping
-
Roberts, R. J. (1995) On Base Flipping, Cell 82, 9-12.
-
(1995)
Cell
, vol.82
, pp. 9-12
-
-
Roberts, R.J.1
-
17
-
-
0030448581
-
Targeted base stacking disruption by the EcoRI DNA methyltransferase
-
Allan, B. W., and Reich, N. O. (1996) Targeted base stacking disruption by the EcoRI DNA methyltransferase, Biochemistry 35, 14757-62.
-
(1996)
Biochemistry
, vol.35
, pp. 14757-14762
-
-
Allan, B.W.1
Reich, N.O.2
-
18
-
-
0030766474
-
The role of base flipping in damage recognition and catalysis by T4 endonuclease V
-
McCullough, A. K., Dodson, M. L., Scharer, O. D., and Lloyd, R. S. (1997) The role of base flipping in damage recognition and catalysis by T4 endonuclease V, J. Biol. Chem. 272, 27210-7.
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 27210-27217
-
-
McCullough, A.K.1
Dodson, M.L.2
Scharer, O.D.3
Lloyd, R.S.4
-
19
-
-
0028812143
-
Crystal structure of DNA photolyase from Escherichia coli
-
Park, H. W., Kim, S. T., Sancar, A., and Deisenhofer, J. (1995) Crystal structure of DNA photolyase from Escherichia coli, Science 268, 1866-72.
-
(1995)
Science
, vol.268
, pp. 1866-1872
-
-
Park, H.W.1
Kim, S.T.2
Sancar, A.3
Deisenhofer, J.4
-
20
-
-
0033105505
-
"Base flipping": Photodamaged DNA-RNA duplexes are poor substrates for photoreactivating DNA-repair enzymes
-
Butenandt, J., Burgdorf, L. T., and Carell, T. (1999) "Base flipping": Photodamaged DNA-RNA duplexes are poor substrates for photoreactivating DNA-repair enzymes, Angew. Chem., Int. Ed. 38, 708-11.
-
(1999)
Angew. Chem., Int. Ed.
, vol.38
, pp. 708-711
-
-
Butenandt, J.1
Burgdorf, L.T.2
Carell, T.3
-
21
-
-
0032493753
-
Evidence for dinucleotide flipping by DNA photolyase
-
Vande Berg, B. J., and Sancar, G. B. (1998) Evidence for dinucleotide flipping by DNA photolyase, J. Biol. Chem. 273, 20276-84.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 20276-20284
-
-
Vande Berg, B.J.1
Sancar, G.B.2
-
22
-
-
0037064082
-
Cyclobutylpyrimidine Dimer Base Flipping by DNA Photolyase
-
Christine, K. S., MacFarlane, A. W., IV, Yang, K., and Stanley, R. J. (2002) Cyclobutylpyrimidine Dimer Base Flipping by DNA Photolyase, J. Biol. Chem. 277, 38339-44.
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 38339-38344
-
-
Christine, K.S.1
MacFarlane IV, A.W.2
Yang, K.3
Stanley, R.J.4
-
23
-
-
0014669561
-
Fluorescence Studies of Nucleotides and Polynucleotides
-
Ward, D. C., Reich, E., and Stryer, L. (1969) Fluorescence Studies of Nucleotides and Polynucleotides, J. Biol. Chem. 244, 1228-37.
-
(1969)
J. Biol. Chem.
, vol.244
, pp. 1228-1237
-
-
Ward, D.C.1
Reich, E.2
Stryer, L.3
-
24
-
-
0031941434
-
Direct real time observation of base flipping by the EcoRI DNA methyltransferase
-
Allan, B. W., Beechem, J. M., Lindstrom, W. M., and Reich, N. O. (1998) Direct real time observation of base flipping by the EcoRI DNA methyltransferase, J. Biol. Chem. 273, 2368-73.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 2368-2373
-
-
Allan, B.W.1
Beechem, J.M.2
Lindstrom, W.M.3
Reich, N.O.4
-
25
-
-
0033591334
-
Identification of the binding site for the extrahelical target base in N-6-adenine DNA methyltransferases by photo-cross-linking with duplex oligodeoxyribonucleotides containing 5-iodouracil at the target position
-
Holz, B., Dank, N., Eickhoff, J. E., Lipps, G., Krauss, G., and Weinhold, E. (1999) Identification of the binding site for the extrahelical target base in N-6-adenine DNA methyltransferases by photo-cross-linking with duplex oligodeoxyribonucleotides containing 5-iodouracil at the target position, J. Biol. Chem. 274, 15066-72.
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 15066-15072
-
-
Holz, B.1
Dank, N.2
Eickhoff, J.E.3
Lipps, G.4
Krauss, G.5
Weinhold, E.6
-
26
-
-
10044280323
-
Crystal structure of a photolyase bound to a CPD-like DNA lesion after in situ repair
-
Mees, A., Klar, T., Gnau, P., Hennecke, U., Eker, A. P. M., Carell, T., and Essen, L. O. (2004) Crystal structure of a photolyase bound to a CPD-like DNA lesion after in situ repair, Science 306, 1789-93.
-
(2004)
Science
, vol.306
, pp. 1789-1793
-
-
Mees, A.1
Klar, T.2
Gnau, P.3
Hennecke, U.4
Eker, A.P.M.5
Carell, T.6
Essen, L.O.7
-
27
-
-
0025100995
-
Chromophore function and interaction in Escherichia coli DNA photolyase: Reconstitution of the apoenzyme with pterin and/or flavin derivatives
-
Jorns, M. S., Wang, B. Y., Jordan, S. P., and Chanderkar, L. P. (1990) Chromophore function and interaction in Escherichia coli DNA photolyase: Reconstitution of the apoenzyme with pterin and/or flavin derivatives, Biochemistry 29, 552-61.
-
(1990)
Biochemistry
, vol.29
, pp. 552-561
-
-
Jorns, M.S.1
Wang, B.Y.2
Jordan, S.P.3
Chanderkar, L.P.4
-
28
-
-
0038573011
-
Frequency and Spectrum of Mutations Produced by a Single Cis-Syn Thymine-Thymine Cyclobutane Dimer in a Single-Stranded Vector
-
Banerjee, S. K., Christensen, R. B., Lawrence, C. W., and Leclerc, J. E. (1988) Frequency and Spectrum of Mutations Produced by a Single Cis-Syn Thymine-Thymine Cyclobutane Dimer in a Single-Stranded Vector, Proc. Natl. Acad. Sci. U.S.A. 85, 8141-5.
-
(1988)
Proc. Natl. Acad. Sci. U.S.A.
, vol.85
, pp. 8141-8145
-
-
Banerjee, S.K.1
Christensen, R.B.2
Lawrence, C.W.3
Leclerc, J.E.4
-
29
-
-
0029100232
-
Extracting thermodynamic data from equilibrium melting curves for oligonucleotide order-disorder transitions
-
Breslauer, K. J. (1995) Extracting thermodynamic data from equilibrium melting curves for oligonucleotide order-disorder transitions, Methods Enzymol. 259, 221-42.
-
(1995)
Methods Enzymol.
, vol.259
, pp. 221-242
-
-
Breslauer, K.J.1
-
30
-
-
18744401872
-
Crystal structure of a DNA decamer containing a cis-syn thymine dimer
-
Park, H., Zhang, K. J., Ren, Y. J., Nadji, S., Sinha, N., Taylor, J. S., and Kang, C. H. (2002) Crystal structure of a DNA decamer containing a cis-syn thymine dimer, Proc. Natl. Acad. Sci. U.S.A. 99, 15965-70.
-
(2002)
Proc. Natl. Acad. Sci. U.S.A.
, vol.99
, pp. 15965-15970
-
-
Park, H.1
Zhang, K.J.2
Ren, Y.J.3
Nadji, S.4
Sinha, N.5
Taylor, J.S.6
Kang, C.H.7
-
31
-
-
0032529296
-
Thermodynamic and base-pairing studies of matched and mismatched DNA dodecamer duplexes containing cis-syn, (6-4) and Dewar photoproducts of TT
-
Jing, Y., Kao, J. F. L., and Taylor, J.-S. (1998) Thermodynamic and base-pairing studies of matched and mismatched DNA dodecamer duplexes containing cis-syn, (6-4) and Dewar photoproducts of TT, Nucleic Acids Res. 26, 3845-53.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 3845-3853
-
-
Jing, Y.1
Kao, J.F.L.2
Taylor, J.-S.3
-
32
-
-
0025196845
-
1H NMR assignment and melting temperature study of cis-syn and trans-syn thymine dimer containing duplexes of d(CGTATTATGC) ·d(GCATAATACG)
-
1H NMR assignment and melting temperature study of cis-syn and trans-syn thymine dimer containing duplexes of d(CGTATTATGC) ·d(GCATAATACG), Biochemistry 29, 8858-66.
-
(1990)
Biochemistry
, vol.29
, pp. 8858-8866
-
-
Taylor, J.S.1
Garrett, D.S.2
Brockie, I.R.3
Svoboda, D.L.4
Telser, J.5
-
33
-
-
0029758746
-
Spectroscopic and calorimetric characterizations of DNA duplexes containing 2-aminopurine
-
Law, S. M., Eritja, R., Goodman, M. F., and Breslauer, K. J. (1996) Spectroscopic and calorimetric characterizations of DNA duplexes containing 2-aminopurine, Biochemistry 35, 12329-37.
-
(1996)
Biochemistry
, vol.35
, pp. 12329-12337
-
-
Law, S.M.1
Eritja, R.2
Goodman, M.F.3
Breslauer, K.J.4
-
34
-
-
0032500623
-
Solution-state structure of a DNA dodecamer duplex containing a cis-syn thymine cyclobutane dimer, the major UV photoproduct of DNA
-
McAteer, K., Jing, Y., Kao, J., Taylor, J. S., and Kennedy, M. A. (1998) Solution-state structure of a DNA dodecamer duplex containing a cis-syn thymine cyclobutane dimer, the major UV photoproduct of DNA, J. Mol. Biol. 282, 1013-32.
-
(1998)
J. Mol. Biol.
, vol.282
, pp. 1013-1032
-
-
McAteer, K.1
Jing, Y.2
Kao, J.3
Taylor, J.S.4
Kennedy, M.A.5
-
35
-
-
3042599013
-
The thermodynamics of DNA structural motifs
-
SantaLucia, J., Jr., and Hicks, D. (2004) The thermodynamics of DNA structural motifs, Annu. Rev. Biophys. Biomol. Struct. 33, 415-40.
-
(2004)
Annu. Rev. Biophys. Biomol. Struct.
, vol.33
, pp. 415-440
-
-
SantaLucia Jr., J.1
Hicks, D.2
-
36
-
-
0020674698
-
Base-stacking and base-pairing contributions to helix stability: Thermodynamics of double-helix formation with CCGG, CCGGp, CCGGAp, ACCGGp, CCGGUp, and ACCGGUp
-
Petersheim, M., and Turner, D. H. (1983) Base-stacking and base-pairing contributions to helix stability: Thermodynamics of double-helix formation with CCGG, CCGGp, CCGGAp, ACCGGp, CCGGUp, and ACCGGUp, Biochemistry 22, 256-63.
-
(1983)
Biochemistry
, vol.22
, pp. 256-263
-
-
Petersheim, M.1
Turner, D.H.2
-
37
-
-
3543088541
-
Stacking-unstacking dynamics of oligodeoxynucleotide trimers
-
Jean, J. M., and Hall, K. B. (2004) Stacking-unstacking dynamics of oligodeoxynucleotide trimers, Biochemistry 43, 10277-84.
-
(2004)
Biochemistry
, vol.43
, pp. 10277-10284
-
-
Jean, J.M.1
Hall, K.B.2
-
38
-
-
0034687675
-
Femtosecond direct observation of charge transfer between bases in DNA
-
Wan, C. Z., Fiebig, T., Schiemann, O., Barton, J. K., and Zewail, A. H. (2000) Femtosecond direct observation of charge transfer between bases in DNA, Proc. Natl. Acad. Sci. U.S.A. 97, 14052-5.
-
(2000)
Proc. Natl. Acad. Sci. U.S.A.
, vol.97
, pp. 14052-14055
-
-
Wan, C.Z.1
Fiebig, T.2
Schiemann, O.3
Barton, J.K.4
Zewail, A.H.5
-
39
-
-
0033555454
-
Electron transfer between bases in double helical DNA
-
Kelley, S. O., and Barton, J. K. (1999) Electron transfer between bases in double helical DNA, Science 283, 375-81.
-
(1999)
Science
, vol.283
, pp. 375-381
-
-
Kelley, S.O.1
Barton, J.K.2
-
40
-
-
0031027125
-
How easily oxidizable is DNA? One-electron reduction potentials of adenosine and guanosine radicals in aqueous solution
-
Steenken, S., and Jovanovic, S. V. (1997) How easily oxidizable is DNA? One-electron reduction potentials of adenosine and guanosine radicals in aqueous solution, J. Am. Chem. Soc. 119, 617-8.
-
(1997)
J. Am. Chem. Soc.
, vol.119
, pp. 617-618
-
-
Steenken, S.1
Jovanovic, S.V.2
-
41
-
-
1642533609
-
Ultrafast transient-absorption and steady-state fluorescence measurements on 2-aminopurine substituted dinucleotides and 2-aminopurine substituted DNA duplexes
-
Larsen, O. F. A., van Stokkum, I. H. M., de Weerd, F. L., Vengris, M., Aravindakumar, C. T., van Grondelle, R., Geacintov, N. E., and van Amerongen, H. (2004) Ultrafast transient-absorption and steady-state fluorescence measurements on 2-aminopurine substituted dinucleotides and 2-aminopurine substituted DNA duplexes, Phys. Chem. Chem. Phys. 6, 154-60.
-
(2004)
Phys. Chem. Chem. Phys.
, vol.6
, pp. 154-160
-
-
Larsen, O.F.A.1
Van Stokkum, I.H.M.2
De Weerd, F.L.3
Vengris, M.4
Aravindakumar, C.T.5
Van Grondelle, R.6
Geacintov, N.E.7
Van Amerongen, H.8
-
42
-
-
0037120095
-
Femtosecond charge transfer dynamics of a modified DNA base: 2-Aminopurine in complexes with nucleotides
-
Fiebig, T., Wan, C. Z., and Zewail, A. H. (2002) Femtosecond charge transfer dynamics of a modified DNA base: 2-Aminopurine in complexes with nucleotides, ChemPhysChem 3, 781-8.
-
(2002)
ChemPhysChem
, vol.3
, pp. 781-788
-
-
Fiebig, T.1
Wan, C.Z.2
Zewail, A.H.3
-
43
-
-
11444261395
-
Fluorescence quenching of 2-aminopurine in dinucleotides
-
Somsen, O. J. G., Hoek, V. A., and Amerongen, V. H. (2005) Fluorescence quenching of 2-aminopurine in dinucleotides, Chem. Phys. Lett. 402, 61-5.
-
(2005)
Chem. Phys. Lett.
, vol.402
, pp. 61-65
-
-
Somsen, O.J.G.1
Hoek, V.A.2
Amerongen, V.H.3
-
44
-
-
0037027319
-
2-Aminopurine electronic structure and fluorescence properties in DNA
-
Jean, J. M., and Hall, K. B. (2002) 2-Aminopurine electronic structure and fluorescence properties in DNA, Biochemistry 41, 13152-61.
-
(2002)
Biochemistry
, vol.41
, pp. 13152-13161
-
-
Jean, J.M.1
Hall, K.B.2
-
45
-
-
0023650526
-
Binding of Escherichia coli DNA photolyase to a defined substrate containing a single T< >T dimer
-
Husain, I., and Sancar, A. (1987) Binding of Escherichia coli DNA photolyase to a defined substrate containing a single T< >T dimer, Nucleic Acids Res. 15, 1109-20.
-
(1987)
Nucleic Acids Res.
, vol.15
, pp. 1109-1120
-
-
Husain, I.1
Sancar, A.2
|