Cis-Syn thymidine dimer repair by DNA photolyase in real time

Biochemistry

Volumn 42, Issue 28, 2003, Pages 8558-8568

  MacFarlane IV, Alexander W ^a   Stanley, Robert J ^a  

^a Temple University   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

PHOTOLYASE (PL);

DIMERS; ELECTRON TRANSITIONS; SUBSTRATES; ULTRAVIOLET SPECTROSCOPY;

DNA;

CYCLOBUTYLPYRIMIDINE DIMER; DEOXYRIBODIPYRIMIDINE PHOTOLYASE; DIMER; FLAVINE ADENINE NUCLEOTIDE; FLAVOPROTEIN; OLIGOTHYMIDINE; SEMIQUINONE; THYMIDINE; THYMIDINE DERIVATIVE; UNCLASSIFIED DRUG;

ANACYSTIS NIDULANS; ARTICLE; DNA REPAIR; ELECTRON TRANSPORT; ENZYME ACTIVATION; ENZYME KINETICS; PRIORITY JOURNAL; ULTRAVIOLET SPECTROSCOPY;

BACTERIA; CELL-FREE SYSTEM; DEOXYRIBODIPYRIMIDINE PHOTO-LYASE; DNA REPAIR; ESCHERICHIA COLI; KINETICS; PYRIMIDINE DIMERS; SPECTROPHOTOMETRY; THYMIDINE;

ANACYSTIS; ANACYSTIS NIDULANS;

EID: 0038116610     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi034015w     Document Type: Article

References (52)

1. Sancar, A. (1994) Biochemistry 33, 2-9.
2. Hartman, R. F., Van Camp, J. R., and Rose, S. D. (1987) J. Org. Chem. 52, 2684-2689.
3. Yeh, S. R., and Falvey, D. E. (1991) J. Am. Chem. Soc. 113, 8557-8558.
4. Heelis, P. F., Okamura, T., and Sancar, A. (1990) Biochemistry 29, 5694-5698.
5. Jordan, S. P., and Jorns, M. S. (1988) Biochemistry 27, 8915-8923.
6. Heelis, P. F., Kim, S. T., Okamura, T., and Sancar, A. (1993) J. Photochem. Photobiol., B 17, 219-228.
7. Langenbacher, T., Zhao, X., Bieser, G., Heelis, P. F., Sancar, A., and Michel-Beyerle, M. E. (1997) J. Am. Chem. Soc. 119, 10532-10536.
8. Heelis, P. F., and Sancar, A. (1986) Biochemistry 25, 8163-8166.
9. Okamura, T., Sancar, A., Heelis, P. F., Hirata, Y., and Mataga, N. (1989) J. Am. Chem. Soc. 111, 5967-5969.
10. Kim, S. T., Heelis, P. F., Okamura, T., Hirata, Y., Mataga, N., and Sancar, A. (1991) Biochemistry 30, 11262-11270.
11. Okamura, T., Sancar, A., Heelis, P. F., Begley, T. P., Hirata, Y., and Mataga, N. (1991) J. Am. Chem. Soc. 113, 3143-3145.
12. Kim, S. T., Heelis, P. F., and Sancar, A. (1992) Biochemistry 31, 11244-11248.
13. Kim, S.-T., Volk, M., Rousseau, G., Heelis, P. F., Sancar, A., and Michel-Beyerle, M.-E. (1994) J. Am. Chem. Soc. 116, 3115-3116.
14. Aubert, C., Vos, M. H., Mathis, P., Eker, A. P. M., and Brettel, K. (2000) Nature 405, 586-590.
15. MacFarlane, A. W., IV, and Stanley, R. J. (2001) Biochemistry 40, 15203-15214.
16. Aubert, C., Mathis, P., Eker, A. P., and Brettel, K. (1999) Proc. Natl. Acad. Sci. U.S.A. 96, 5423-5427.
17. Aubert, C., Brettel, K., Mathis, P., Eker, A. P. M., and Boussac, A. (1999) J. Am. Chem. Soc. 121, 8659-8660.
18. Fisher, G. J., and Johns, H. E. (1976) in Photochemistry and Photobiology of Nucleic Acids (Wang, S. Y., Ed.) pp 226-294, Academic Press, New York.
19. Takao, M., Oikawa, A., Eker, A. P. M., and Yasui, A. (1989) Photochem. Photobiol. 50, 633-637.
20. Malhotra, K., Kim, S. T., Walsh, C., and Sancar, A. (1992) J. Biol. Chem. 267, 15406-15411.
21. Jorns, M. S., Wang, B., and Jordan, S. (1987) Biochemistry 26, 6810-6816.
22. Heelis, P. F., Payne, G., and Sancar, A. (1987) Biochemistry 26, 4634-4640.
23. Kim, S. T., and Sancar, A. (1991) Biochemistry 30, 8623-8630.
24. Wang, B., and Jorns, M. S. (1989) Biochemistry 28, 1148-1152.
25. Yasui, A., Takao, M., Oikawa, A., Kiener, A., Walsh, C. T., and Eker, A. P. M. (1988) Nucleic Acids Res. 16, 4447-4463.
26. Sancar, G. B., Smith, F. W., Lorence, M. C., Rupert, C. S., and Sancar, A. (1984) J. Biol. Chem. 259, 6033-6038.
27. Jorns, M. S., Wang, B., Jordan, S. P., and Chanderkar, L. P. (1990) Biochemistry 29, 552-561.
28. Ho, P. P., and Alfano, R. R. (1979) Phys. Rev. A 20, 2170-2187.
29. Anfinrud, P., Crackel, R. L., and Struve, W. S. (1984) J. Phys. Chem. 88, 5873-5882.
30. Du, M., Rosenthal, S. J., Xie, X., DiMagno, T. J., Schmidt, M., Hanson, D. K., Schiffer, M., Norris, J. R., and Fleming, G. R. (1992) Proc. Natl. Acad. Sci. U.S.A. 89, 8517-8521.
31. Stanley, R. J., King, B., and Boxer, S. G. (1996) J. Phys. Chem. 100, 12052-12059.
32. Jordan, S. P., Alderfer, J. L., Chanderka, L. P., and Jorns, M. S. (1989) Biochemistry 28, 8149-8153.
33. Heelis, P. F., Hartman, R. F., and Rose, S. D. (1993) Photochem. Photobiol. 57, 1053-1055.
34. Enescu, M., Lindqvist, L., and Soep, B. (1998) Photochem. Photobiol. 68, 150-156.
35. Stanley, R. J., and MacFarlane, A. W., IV (2000) J. Phys. Chem. A 104, 6899-6906.
36. Bent, D. V., and Hayon, E. (1975) J. Am. Chem. Soc. 97, 2612-2619.
37. Hayon, E. (1969) J. Chem. Phys. 51, 4881-4892.
38. Stanley, R. J., and Siddiqui, M. S. (2001) J. Phys. Chem. A 105, 11001-11008.
39. Jorns, M. S., Wang, B., and Jordan, S. (1987) Biochemistry 26, 6810-6816.
40. Payne, G., Wills, M., Walsh, C., and Sancar, A. (1990) Biochemistry 29, 5706-5711.
41. Sancar, G. B., Jorns, M. S., Payne, G., Fluke, D. J., Rupert, C. S., and Sancar, A. (1987) J. Biol. Chem. 262, 492-498.
42. Payne, G., and Sancar, A. (1990) Biochemistry 29, 7715-7727.
43. Ramsey, A. J., Alderfer, J. L., and Jorns, M. S. (1992) Biochemistry 31, 7134-7142.
44. Voityuk, A. A., Michel-Beyerle, M. E., and Rösch, N. (2001) Chem. Phys. Lett. 342, 231-238.
45. Al-Jihad, I., Smets, J., and Adamowicz, L. (2000) J. Phys. Chem. A 104, 2994-2998.
46. Hendricks, J. H., Lyapustina, S. A., de Clercq, H. L., and Bowen, K. H. (1998) J. Chem. Phys. 108, 8-11.
47. Hahn, J., Michel-Beyerle, M.-E., and Rösch, N. (1999) J. Phys. Chem. B 103, 2001-2007.
48. Sanders, D. B., and Wiest, O. (1999) J. Am. Chem. Soc. 121, 5127-5134.
49. Weber, S., Moebius, K., Richter, G., and Kay, C. W. M. (2001) J. Am. Chem. Soc. 123, 3790-3798.
50. Park, H.-W., Kim, S.-T., Sancar, A., and Deisenhofer, J. (1995) Science 268, 1866-1872.
51. Berg, B. J. V., and Sancar, G. B. (1998) J. Biol. Chem. 273, 20276-20284.
52. Antony, J., Medvedev, D. M., and Stuchebrukhov, A. A. (2000) J. Am. Chem. Soc. 122, 1057-1065.