-
1
-
-
0036305955
-
Architecture of Fis-activated transcription complexes at the Escherichia coli rrnB P1 and rrnE P1 promoters
-
Aiyar, S. E., S. M. McLeod, W. Ross, C. A. Hirvonen, M. S. Thomas, R. C. Johnson, and R. L. Gourse. 2002. Architecture of Fis-activated transcription complexes at the Escherichia coli rrnB P1 and rrnE P1 promoters. J. Mol. Biol. 316:501-516.
-
(2002)
J. Mol. Biol.
, vol.316
, pp. 501-516
-
-
Aiyar, S.E.1
McLeod, S.M.2
Ross, W.3
Hirvonen, C.A.4
Thomas, M.S.5
Johnson, R.C.6
Gourse, R.L.7
-
2
-
-
0032716841
-
Growth phase-dependent variation in protein composition of the Escherichia coli nucleoid
-
Ali Azam, T., A. Iwata, A. Nishimura, S. Ueda, and A. Ishihama. 1999. Growth phase-dependent variation in protein composition of the Escherichia coli nucleoid. J. Bacteriol. 181:6361-6370.
-
(1999)
J. Bacteriol.
, vol.181
, pp. 6361-6370
-
-
Ali Azam, T.1
Iwata, A.2
Nishimura, A.3
Ueda, S.4
Ishihama, A.5
-
3
-
-
0026620949
-
Dramatic changes in Fis levels upon nutrient upshift in Escherichia coli
-
Ball, C. A., R. Osuna, K. C. Ferguson, and R. C. Johnson. 1992. Dramatic changes in Fis levels upon nutrient upshift in Escherichia coli. J. Bacteriol. 174:8043-8056.
-
(1992)
J. Bacteriol.
, vol.174
, pp. 8043-8056
-
-
Ball, C.A.1
Osuna, R.2
Ferguson, K.C.3
Johnson, R.C.4
-
4
-
-
0035951301
-
Mechanism of regulation of transcription initiation by ppGpp. II. Models for positive control based on properties of RNAP mutants and competition for RNAP
-
Barker, M. M., T. Gaal, and R. L. Gourse. 2001. Mechanism of regulation of transcription initiation by ppGpp. II. Models for positive control based on properties of RNAP mutants and competition for RNAP. J. Mol. Biol. 305:689-702.
-
(2001)
J. Mol. Biol.
, vol.305
, pp. 689-702
-
-
Barker, M.M.1
Gaal, T.2
Gourse, R.L.3
-
5
-
-
0035951305
-
Mechanism of regulation of transcription initiation by ppGpp. I. Effects of ppGpp on transcription initiation in vivo and in vitro
-
Barker, M. M., T. Gaal, C. A. Josaitis, and R. L. Gourse. 2001. Mechanism of regulation of transcription initiation by ppGpp. I. Effects of ppGpp on transcription initiation in vivo and in vitro. J. Mol. Biol. 305:673-688.
-
(2001)
J. Mol. Biol.
, vol.305
, pp. 673-688
-
-
Barker, M.M.1
Gaal, T.2
Josaitis, C.A.3
Gourse, R.L.4
-
6
-
-
0034118883
-
Regulation of rRNA transcription is remarkably robust: FIS compensates for altered nucleoside triphosphate sensing by mutant RNA polymerases at Escherichia coli rrn P1 promoters
-
Bartlett, M. S., T. Gaal, W. Ross, and R. L. Gourse. 2000. Regulation of rRNA transcription is remarkably robust: FIS compensates for altered nucleoside triphosphate sensing by mutant RNA polymerases at Escherichia coli rrn P1 promoters. J. Bacteriol. 182:1969-1977.
-
(2000)
J. Bacteriol.
, vol.182
, pp. 1969-1977
-
-
Bartlett, M.S.1
Gaal, T.2
Ross, W.3
Gourse, R.L.4
-
7
-
-
0028068735
-
Growth rate-dependent control of the rrnB P1 core promoter in Escherichia coli
-
Bartlett, M. S., and R. L. Gourse. 1994. Growth rate-dependent control of the rrnB P1 core promoter in Escherichia coli. J. Bacteriol. 176:5560-5564.
-
(1994)
J. Bacteriol.
, vol.176
, pp. 5560-5564
-
-
Bartlett, M.S.1
Gourse, R.L.2
-
8
-
-
0031733414
-
Identification and characterization of the fis operon in enteric bacteria
-
Beach, M. B., and R. Osuna. 1998. Identification and characterization of the fis operon in enteric bacteria. J. Bacteriol. 180:5932-5946.
-
(1998)
J. Bacteriol.
, vol.180
, pp. 5932-5946
-
-
Beach, M.B.1
Osuna, R.2
-
9
-
-
0031015563
-
Molecular anatomy of a transcription activation patch: FIS-RNA polymerase interactions at the Escherichia coli rrnB P1 promoter
-
Bokal, A. J., W. Ross, T. Gaal, R. C. Johnson, and R. L. Gourse. 1997. Molecular anatomy of a transcription activation patch: FIS-RNA polymerase interactions at the Escherichia coli rrnB P1 promoter. EMBO J. 16:154-162.
-
(1997)
EMBO J.
, vol.16
, pp. 154-162
-
-
Bokal, A.J.1
Ross, W.2
Gaal, T.3
Johnson, R.C.4
Gourse, R.L.5
-
10
-
-
0016748261
-
A procedure for the rapid, large-scale purification of Escherichia coli DNA-dependent RNA polymerase involving Polymin P precipitation and DNA-cellulose chromatography
-
Burgess, R. R., and J. J. Jendrisak. 1975. A procedure for the rapid, large-scale purification of Escherichia coli DNA-dependent RNA polymerase involving Polymin P precipitation and DNA-cellulose chromatography. Biochemistry 14:4634-4638.
-
(1975)
Biochemistry
, vol.14
, pp. 4634-4638
-
-
Burgess, R.R.1
Jendrisak, J.J.2
-
11
-
-
0024213092
-
Analysis of the promoters and transcripts involved in IS10 anti-sense RNA control
-
Case, C. C., S. M. Roels, J. E. Gonzalez, E. L. Simons, and R. W. Simons. 1988. Analysis of the promoters and transcripts involved in IS10 anti-sense RNA control. Gene 72:219-236.
-
(1988)
Gene
, vol.72
, pp. 219-236
-
-
Case, C.C.1
Roels, S.M.2
Gonzalez, J.E.3
Simons, E.L.4
Simons, R.W.5
-
12
-
-
0003174053
-
The stringent response
-
F. C. Neidhardt, R. Curtiss III, J. L. Ingraham, E. C. C. Lin, K. B. Low, B. Magasanik, W. S. Reznikoff, M. Riley, M. Schaechter, and H. E. Umbarger (ed.). ASM Press, Washington, D.C.
-
Cashel, M., D. R. Gentry, V. J. Hernandez, and D. Vinella. 1996. The stringent response, p. 1458-1496. In F. C. Neidhardt, R. Curtiss III, J. L. Ingraham, E. C. C. Lin, K. B. Low, B. Magasanik, W. S. Reznikoff, M. Riley, M. Schaechter, and H. E. Umbarger (ed.), Escherichia coli and Salmonella typhimurium: cellular and molecular biology, 2nd ed., vol. 1. ASM Press, Washington, D.C.
-
(1996)
Escherichia Coli and Salmonella Typhimurium: Cellular and Molecular Biology, 2nd Ed.
, vol.1
, pp. 1458-1496
-
-
Cashel, M.1
Gentry, D.R.2
Hernandez, V.J.3
Vinella, D.4
-
13
-
-
0030601787
-
Regulation of HU alpha and HU beta by CRP and FIS in Escherichia coli
-
Claret, L., and J. Rouviere-Yaniv. 1996. Regulation of HU alpha and HU beta by CRP and FIS in Escherichia coli. J. Mol. Biol. 263:126-139.
-
(1996)
J. Mol. Biol.
, vol.263
, pp. 126-139
-
-
Claret, L.1
Rouviere-Yaniv, J.2
-
14
-
-
0028804889
-
Control of rRNA transcription in Escherichia coli
-
Condon, C., C. Squires, and C. L. Squires. 1995. Control of rRNA transcription in Escherichia coli. Microbiol. Rev. 59:623-645.
-
(1995)
Microbiol. Rev.
, vol.59
, pp. 623-645
-
-
Condon, C.1
Squires, C.2
Squires, C.L.3
-
15
-
-
0029880342
-
Antagonistic involvement of FIS and H-NS proteins in the transcriptional control of hns expression
-
Falconi, M., A. Brandi, A. La Teana, C. O. Gualerzi, and C. L. Pon. 1996. Antagonistic involvement of FIS and H-NS proteins in the transcriptional control of hns expression. Mol. Microbiol. 19:965-975.
-
(1996)
Mol. Microbiol.
, vol.19
, pp. 965-975
-
-
Falconi, M.1
Brandi, A.2
La Teana, A.3
Gualerzi, C.O.4
Pon, C.L.5
-
16
-
-
0034767928
-
Involvement of FIS in the H-NS-mediated regulation of virF gene of Shigella and enteroinvasive Escherichia coli
-
Falconi, M., G. Prosseda, M. Giangrossi, E. Beghetto, and B. Colonna. 2001. Involvement of FIS in the H-NS-mediated regulation of virF gene of Shigella and enteroinvasive Escherichia coli. Mol. Microbiol. 42:439-452.
-
(2001)
Mol. Microbiol.
, vol.42
, pp. 439-452
-
-
Falconi, M.1
Prosseda, G.2
Giangrossi, M.3
Beghetto, E.4
Colonna, B.5
-
17
-
-
0026470852
-
The Fis protein: It's not just for DNA inversion anymore
-
Finkel, S. E., and R. C. Johnson. 1992. The Fis protein: it's not just for DNA inversion anymore. Mol. Microbiol. 6:3257-3265.
-
(1992)
Mol. Microbiol.
, vol.6
, pp. 3257-3265
-
-
Finkel, S.E.1
Johnson, R.C.2
-
18
-
-
0031443321
-
Transcription regulation by initiating NTP concentration: RRNA synthesis in bacteria
-
Gaal, T., M. S. Bartlett, W. Ross, C. L. Turnbough, Jr., and R. L. Gourse. 1997. Transcription regulation by initiating NTP concentration: rRNA synthesis in bacteria. Science 278:2092-2097.
-
(1997)
Science
, vol.278
, pp. 2092-2097
-
-
Gaal, T.1
Bartlett, M.S.2
Ross, W.3
Turnbough Jr., C.L.4
Gourse, R.L.5
-
19
-
-
0025102288
-
Guanosine 3′-diphosphate 5′-diphosphate is not required for growth rate-dependent control of rRNA synthesis in Escherichia coli
-
Gaal, T., and R. L. Gourse. 1990. Guanosine 3′-diphosphate 5′-diphosphate is not required for growth rate-dependent control of rRNA synthesis in Escherichia coli. Proc. Natl. Acad. Sci. USA 87:5533-5537.
-
(1990)
Proc. Natl. Acad. Sci. USA
, vol.87
, pp. 5533-5537
-
-
Gaal, T.1
Gourse, R.L.2
-
20
-
-
0034893772
-
Role of the nucleoid-associated protein Fis in the regulation of virulence properties of enteropathogenic Escherichia coli
-
Goldberg, M. D., M. Johnson, J. C. Hinton, and P. H. Williams. 2001. Role of the nucleoid-associated protein Fis in the regulation of virulence properties of enteropathogenic Escherichia coli. Mol. Microbiol. 41:549-559.
-
(2001)
Mol. Microbiol.
, vol.41
, pp. 549-559
-
-
Goldberg, M.D.1
Johnson, M.2
Hinton, J.C.3
Williams, P.H.4
-
22
-
-
0029938543
-
The ndh-binding protein (Nbp) regulates the ndh gene of Escherichia coli in response to growth phase and is identical to Fis
-
Green, J., M. F. Anjum, and J. R. Guest. 1996. The ndh-binding protein (Nbp) regulates the ndh gene of Escherichia coli in response to growth phase and is identical to Fis. Mol. Microbiol. 20:1043-1055.
-
(1996)
Mol. Microbiol.
, vol.20
, pp. 1043-1055
-
-
Green, J.1
Anjum, M.F.2
Guest, J.R.3
-
23
-
-
0035171017
-
PromEC: An updated database of Escherichia coli mRNA promoters with experimentally identified transcriptional start sites
-
Hershberg, R., G. Bejerano, A. Santos-Zavaleta, and H. Margalit. 2001. PromEC: an updated database of Escherichia coli mRNA promoters with experimentally identified transcriptional start sites. Nucleic Acids Res. 29:277.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 277
-
-
Hershberg, R.1
Bejerano, G.2
Santos-Zavaleta, A.3
Margalit, H.4
-
24
-
-
0031799629
-
Multiple cis-acting sites positively regulate Escherichia coli nrd expression
-
Jacobson, B. A., and J. A. Fuchs. 1998. Multiple cis-acting sites positively regulate Escherichia coli nrd expression. Mol. Microbiol. 28:1315-1322.
-
(1998)
Mol. Microbiol.
, vol.28
, pp. 1315-1322
-
-
Jacobson, B.A.1
Fuchs, J.A.2
-
25
-
-
0000847987
-
Regulation of ribosome biosynthesis
-
F. C. Neidhardt, R. Curtiss III, J. L. Ingraham, E. C. C. Lin, K. B. Low, B. Magasanik, W. S. Reznikoff, M. Riley, M. Schaechter, and H. E. Umbarger (ed.). ASM Press, Washington, D.C.
-
Keener, J., and M. Nomura. 1996. Regulation of ribosome biosynthesis, p. 1417-1431. In F. C. Neidhardt, R. Curtiss III, J. L. Ingraham, E. C. C. Lin, K. B. Low, B. Magasanik, W. S. Reznikoff, M. Riley, M. Schaechter, and H. E. Umbarger (ed.), Escherichia coli and Salmonella typhimurium: cellular and molecular biology, 2nd ed., vol. 1. ASM Press, Washington, D.C.
-
(1996)
Escherichia Coli and Salmonella Typhimurium: Cellular and Molecular Biology, 2nd Ed.
, vol.1
, pp. 1417-1431
-
-
Keener, J.1
Nomura, M.2
-
26
-
-
0346243938
-
Transcript cleavage factors GreA and GreB act as transient catalytic components of RNA polymerase
-
Laptenko, O., J. Lee, I. Lomakin, and S. Borukhov. 2003. Transcript cleavage factors GreA and GreB act as transient catalytic components of RNA polymerase. EMBO J. 22:6322-6334.
-
(2003)
EMBO J.
, vol.22
, pp. 6322-6334
-
-
Laptenko, O.1
Lee, J.2
Lomakin, I.3
Borukhov, S.4
-
27
-
-
0027230594
-
Compilation of E. coli mRNA promoter sequences
-
Lisser, S., and H. Margalit. 1993. Compilation of E. coli mRNA promoter sequences. Nucleic Acids Res. 21:1507-1516.
-
(1993)
Nucleic Acids Res.
, vol.21
, pp. 1507-1516
-
-
Lisser, S.1
Margalit, H.2
-
28
-
-
0345730808
-
Growth phase-dependent regulation and stringent control of fis are conserved processes in enteric bacteria and involve a single promoter (fis P) in Escherichia coli
-
Mallik, P., T. S. Pratt, M. B. Beach, M. D. Bradley, J. Undamatla, and R. Osuna. 2004. Growth phase-dependent regulation and stringent control of fis are conserved processes in enteric bacteria and involve a single promoter (fis P) in Escherichia coli. J. Bacteriol. 186:122-135.
-
(2004)
J. Bacteriol.
, vol.186
, pp. 122-135
-
-
Mallik, P.1
Pratt, T.S.2
Beach, M.B.3
Bradley, M.D.4
Undamatla, J.5
Osuna, R.6
-
29
-
-
0030664684
-
Fis, an accessorial factor for transcriptional activation of the mar (multiple antibiotic resistance) promoter of Escherichia coli in the presence of the activator MarA, SoxS, or Rob
-
Martin, R. G., and J. L. Rosner. 1997. Fis, an accessorial factor for transcriptional activation of the mar (multiple antibiotic resistance) promoter of Escherichia coli in the presence of the activator MarA, SoxS, or Rob. J. Bacteriol. 179:7410-7419.
-
(1997)
J. Bacteriol.
, vol.179
, pp. 7410-7419
-
-
Martin, R.G.1
Rosner, J.L.2
-
30
-
-
0036304274
-
The C-terminal domains of the RNA polymerase alpha subunits: Contact site with Fis and localization during co-activation with CRP at the Escherichia coli proP P2 promoter
-
McLeod, S. M., S. E. Aiyar, R. L. Gourse, and R. C. Johnson. 2002. The C-terminal domains of the RNA polymerase alpha subunits: contact site with Fis and localization during co-activation with CRP at the Escherichia coli proP P2 promoter. J. Mol. Biol. 316:517-529.
-
(2002)
J. Mol. Biol.
, vol.316
, pp. 517-529
-
-
McLeod, S.M.1
Aiyar, S.E.2
Gourse, R.L.3
Johnson, R.C.4
-
31
-
-
0003842951
-
-
Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N. Y.
-
Miller, J. H. 1992. A short course in bacterial genetics. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N. Y.
-
(1992)
A Short Course in Bacterial Genetics
-
-
Miller, J.H.1
-
32
-
-
0037215597
-
Regulation of the Escherichia coli rrnB P2 promoter
-
Murray, H. D., J. A. Appleman, and R. L. Gourse. 2003. Regulation of the Escherichia coli rrnB P2 promoter. J. Bacteriol. 185:28-34.
-
(2003)
J. Bacteriol.
, vol.185
, pp. 28-34
-
-
Murray, H.D.1
Appleman, J.A.2
Gourse, R.L.3
-
33
-
-
2942538872
-
Unique roles of the rrn P2 rRNA promoters in Escherichia coli
-
Murray, H. D., and R. L. Gourse. 2004. Unique roles of the rrn P2 rRNA promoters in Escherichia coli. Mol. Microbiol. 52:1375-1387.
-
(2004)
Mol. Microbiol.
, vol.52
, pp. 1375-1387
-
-
Murray, H.D.1
Gourse, R.L.2
-
34
-
-
0041669435
-
Control of rRNA expression by small molecules is dynamic and nonredundant
-
Murray, H. D., D. A. Schneider, and R. L. Gourse. 2003. Control of rRNA expression by small molecules is dynamic and nonredundant. Mol. Cell 12:125-134.
-
(2003)
Mol. Cell
, vol.12
, pp. 125-134
-
-
Murray, H.D.1
Schneider, D.A.2
Gourse, R.L.3
-
35
-
-
0028228490
-
Factor for inversion stimulation-dependent growth rate regulation of individual tRNA species in Escherichia coli
-
Nilsson, L., and V. Emilsson. 1994. Factor for inversion stimulation-dependent growth rate regulation of individual tRNA species in Escherichia coli. J. Biol. Chem. 269:9460-9465.
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 9460-9465
-
-
Nilsson, L.1
Emilsson, V.2
-
36
-
-
0026508913
-
FIS-dependent trans activation of stable RNA operons of Escherichia coli under various growth conditions
-
Nilsson, L., H. Verbeek, E. Vijgenboom, C. van Drunen, A. Vanet, and L. Bosch. 1992. FIS-dependent trans activation of stable RNA operons of Escherichia coli under various growth conditions. J. Bacteriol. 174:921-929.
-
(1992)
J. Bacteriol.
, vol.174
, pp. 921-929
-
-
Nilsson, L.1
Verbeek, H.2
Vijgenboom, E.3
Van Drunen, C.4
Vanet, A.5
Bosch, L.6
-
37
-
-
0026569267
-
The E. coli fis promoter is subject to stringent control and autoregulation
-
Ninnemann, O., C. Koch, and R. Kahmann. 1992. The E. coli fis promoter is subject to stringent control and autoregulation. EMBO J. 11:1075-1083.
-
(1992)
EMBO J.
, vol.11
, pp. 1075-1083
-
-
Ninnemann, O.1
Koch, C.2
Kahmann, R.3
-
38
-
-
0043244877
-
Structure and function of the transcription elongation factor GreB bound to bacterial RNA polymerase
-
Opalka, N., M. Chlenov, P. Chacon, W. J. Rice, W. Wriggers, and S. A. Darst. 2003. Structure and function of the transcription elongation factor GreB bound to bacterial RNA polymerase. Cell 114:335-345.
-
(2003)
Cell
, vol.114
, pp. 335-345
-
-
Opalka, N.1
Chlenov, M.2
Chacon, P.3
Rice, W.J.4
Wriggers, W.5
Darst, S.A.6
-
39
-
-
0028953095
-
Sequence, regulation, and functions of fis in Salmonella typhimurium
-
Osuna, R., D. Lienau, K. T. Hughes, and R. C. Johnson. 1995. Sequence, regulation, and functions of fis in Salmonella typhimurium. J. Bacteriol. 177:2021-2032.
-
(1995)
J. Bacteriol.
, vol.177
, pp. 2021-2032
-
-
Osuna, R.1
Lienau, D.2
Hughes, K.T.3
Johnson, R.C.4
-
40
-
-
4444325711
-
A dedicated translation factor controls the synthesis of the global regulator Fis
-
Owens, R. M., G. Pritchard, P. Skipp, M. Hodey, S. R. Connell, K. H. Nierhaus, and C. D. O'Connor. 2004. A dedicated translation factor controls the synthesis of the global regulator Fis. EMBO J. 23:3375-3385.
-
(2004)
EMBO J.
, vol.23
, pp. 3375-3385
-
-
Owens, R.M.1
Pritchard, G.2
Skipp, P.3
Hodey, M.4
Connell, S.R.5
Nierhaus, K.H.6
O'Connor, C.D.7
-
41
-
-
4043069926
-
DksA: A critical component of the transcription initiation machinery that potentiates the regulation of rRNA promoters by ppGpp and the initiating NTP
-
Paul, B. J., M. M. Barker, W. Ross, D. A. Schneider, C. Webb, J. W. Foster, and R. L. Gourse. 2004. DksA: a critical component of the transcription initiation machinery that potentiates the regulation of rRNA promoters by ppGpp and the initiating NTP. Cell 118:311-322.
-
(2004)
Cell
, vol.118
, pp. 311-322
-
-
Paul, B.J.1
Barker, M.M.2
Ross, W.3
Schneider, D.A.4
Webb, C.5
Foster, J.W.6
Gourse, R.L.7
-
42
-
-
20344363655
-
DksA potentiates direct activation of amino acid promoters by ppGpp
-
Paul, B. J., M. B. Berkmen, and R. L. Gourse. 2005. DksA potentiates direct activation of amino acid promoters by ppGpp. Proc. Natl. Acad. Sci. USA 102:7823-7828.
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 7823-7828
-
-
Paul, B.J.1
Berkmen, M.B.2
Gourse, R.L.3
-
43
-
-
10044234372
-
RNA transcription in Escherichia coli
-
Paul, B. J., W. Ross, T. Gaal, and R. L. Gourse. 2004. rRNA transcription in Escherichia coli. Annu. Rev. Genet. 38:749-770.
-
(2004)
Annu. Rev. Genet.
, vol.38
, pp. 749-770
-
-
Paul, B.J.1
Ross, W.2
Gaal, T.3
Gourse, R.L.4
-
44
-
-
4043108470
-
Regulation through the secondary channel-structural framework for ppGpp-DksA synergism during transcription
-
Perederina, A., V. Svetlov, M. N. Vassylyeva, T. H. Tahirov, S. Yokoyama, I. Artsimovitch, and D. G. Vassylyev. 2004. Regulation through the secondary channel-structural framework for ppGpp-DksA synergism during transcription. Cell 118:297-309.
-
(2004)
Cell
, vol.118
, pp. 297-309
-
-
Perederina, A.1
Svetlov, V.2
Vassylyeva, M.N.3
Tahirov, T.H.4
Yokoyama, S.5
Artsimovitch, I.6
Vassylyev, D.G.7
-
45
-
-
0034635448
-
Invariance of the nucleoside triphosphate pools of Escherichia coli with growth rate
-
Petersen, C., and L. B. Moller. 2000. Invariance of the nucleoside triphosphate pools of Escherichia coli with growth rate. J. Biol. Chem. 275:3931-3935.
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 3931-3935
-
-
Petersen, C.1
Moller, L.B.2
-
46
-
-
0032862322
-
Multiple mechanisms are used for growth rate and stringent control of leuV transcriptional initiation in Escherichia coli
-
Pokholok, D. K., M. Redlak, C. L. Turnbough, Jr., S. Dylla, and W. M. Holmes. 1999. Multiple mechanisms are used for growth rate and stringent control of leuV transcriptional initiation in Escherichia coli. J. Bacteriol. 181:5771-5782.
-
(1999)
J. Bacteriol.
, vol.181
, pp. 5771-5782
-
-
Pokholok, D.K.1
Redlak, M.2
Turnbough Jr., C.L.3
Dylla, S.4
Holmes, W.M.5
-
47
-
-
0030795165
-
Deletion analysis of the fis promoter region in Escherichia coli: Antagonistic effects of integration host factor and Fis
-
Pratt, T. S., T. Steiner, L. S. Feldman, K. A. Walker, and R. Osuna. 1997. Deletion analysis of the fis promoter region in Escherichia coli: antagonistic effects of integration host factor and Fis. J. Bacteriol. 179:6367-6377.
-
(1997)
J. Bacteriol.
, vol.179
, pp. 6367-6377
-
-
Pratt, T.S.1
Steiner, T.2
Feldman, L.S.3
Walker, K.A.4
Osuna, R.5
-
48
-
-
0025163439
-
E. coli Fis protein activates ribosomal RNA transcription in vitro and in vivo
-
Ross, W., J. F. Thompson, J. T. Newlands, and R. L. Gourse. 1990. E. coli Fis protein activates ribosomal RNA transcription in vitro and in vivo. EMBO J. 9:3733-3742.
-
(1990)
EMBO J.
, vol.9
, pp. 3733-3742
-
-
Ross, W.1
Thompson, J.F.2
Newlands, J.T.3
Gourse, R.L.4
-
49
-
-
0020415822
-
Control of rRNA and tRNA syntheses in Escherichia coli by guanosine tetraphosphate
-
Ryals, J., R. Little, and H. Bremer. 1982. Control of rRNA and tRNA syntheses in Escherichia coli by guanosine tetraphosphate. J. Bacteriol. 151:1261-1268.
-
(1982)
J. Bacteriol.
, vol.151
, pp. 1261-1268
-
-
Ryals, J.1
Little, R.2
Bremer, H.3
-
50
-
-
0004136246
-
-
Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
-
Sambrook, J. E., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
-
(1989)
Molecular Cloning: A Laboratory Manual, 2nd Ed.
-
-
Sambrook, J.E.1
Fritsch, E.F.2
Maniatis, T.3
-
51
-
-
1542319732
-
Relationship between growth rate and ATP concentration in Escherichia coli: A bioassay for available cellular ATP
-
Schneider, D. A., and R. L. Gourse. 2004. Relationship between growth rate and ATP concentration in Escherichia coli: a bioassay for available cellular ATP. J. Biol. Chem. 279:8262-8268.
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 8262-8268
-
-
Schneider, D.A.1
Gourse, R.L.2
-
52
-
-
0035788453
-
Roles for Fis and YafK in biofilm formation by enteroaggregative Escherichia coli
-
Sheikh, J., S. Hicks, M. Dall'Agnol, A. D. Phillips, and J. P. Nataro. 2001. Roles for Fis and YafK in biofilm formation by enteroaggregative Escherichia coli. Mol. Microbiol. 41:983-997.
-
(2001)
Mol. Microbiol.
, vol.41
, pp. 983-997
-
-
Sheikh, J.1
Hicks, S.2
Dall'Agnol, M.3
Phillips, A.D.4
Nataro, J.P.5
-
53
-
-
0347994909
-
Donation of catalytic residues to RNA polymerase active center by transcription factor Gre
-
Sosunova, E., V. Sosunov, M. Kozlov, V. Nikiforov, A. Goldfarb, and A. Mustaev. 2003. Donation of catalytic residues to RNA polymerase active center by transcription factor Gre. Proc. Natl. Acad. Sci. USA 100:15469-15474.
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 15469-15474
-
-
Sosunova, E.1
Sosunov, V.2
Kozlov, M.3
Nikiforov, V.4
Goldfarb, A.5
Mustaev, A.6
-
54
-
-
0028840106
-
Crystal structure of the GreA transcript cleavage factor from Escherichia coli
-
Stebbins, C. E., S. Borukhov, M. Orlova, A. Polyakov, A. Goldfarb, and S. A. Darst. 1995. Crystal structure of the GreA transcript cleavage factor from Escherichia coli. Nature 373:636-640.
-
(1995)
Nature
, vol.373
, pp. 636-640
-
-
Stebbins, C.E.1
Borukhov, S.2
Orlova, M.3
Polyakov, A.4
Goldfarb, A.5
Darst, S.A.6
-
55
-
-
0023651267
-
Cellular factors couple recombination with growth phase: Characterization of a new component in the lambda site-specific recombination pathway
-
Thompson, J. F., L. Moitoso de Vargas, C. Koch, R. Kahmann, and A. Landy. 1987. Cellular factors couple recombination with growth phase: characterization of a new component in the lambda site-specific recombination pathway. Cell 50:901-908.
-
(1987)
Cell
, vol.50
, pp. 901-908
-
-
Thompson, J.F.1
Moitoso De Vargas, L.2
Koch, C.3
Kahmann, R.4
Landy, A.5
-
56
-
-
4043175811
-
Cloning, expression, purification, crystallization and initial crystallographic analysis of transcription factor DksA from Escherichia coli
-
Vassylyeva, M. N., A. A. Perederina, V. Svetlov, S. Yokoyama, I. Artsimovitch, and D. G. Vassylyev. 2004. Cloning, expression, purification, crystallization and initial crystallographic analysis of transcription factor DksA from Escherichia coli. Acta Crystallogr. D 60:1611-1613.
-
(2004)
Acta Crystallogr. D
, vol.60
, pp. 1611-1613
-
-
Vassylyeva, M.N.1
Perederina, A.A.2
Svetlov, V.3
Yokoyama, S.4
Artsimovitch, I.5
Vassylyev, D.G.6
-
57
-
-
0033063805
-
Functional determinants of the Escherichia coli fis promoter: Roles of -35, -10, and transcription initiation regions in the response to stringent control and growth phase-dependent regulation
-
Walker, K. A., C. L. Atkins, and R. Osuna. 1999. Functional determinants of the Escherichia coli fis promoter: roles of -35, -10, and transcription initiation regions in the response to stringent control and growth phase-dependent regulation. J. Bacteriol. 181:1269-1280.
-
(1999)
J. Bacteriol.
, vol.181
, pp. 1269-1280
-
-
Walker, K.A.1
Atkins, C.L.2
Osuna, R.3
-
58
-
-
10944232640
-
The Escherichia coli fis promoter is regulated by changes in the levels of its transcription initiation nucleotide CTP
-
Walker, K. A., P. Mallik, T. S. Pratt, and R. Osuna. 2004. The Escherichia coli fis promoter is regulated by changes in the levels of its transcription initiation nucleotide CTP. J. Biol. Chem. 279:50818-50828.
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 50818-50828
-
-
Walker, K.A.1
Mallik, P.2
Pratt, T.S.3
Osuna, R.4
-
59
-
-
0036719293
-
Factors affecting start site selection at the Escherichia coli fis promoter
-
Walker, K. A., and R. Osuna. 2002. Factors affecting start site selection at the Escherichia coli fis promoter. J. Bacteriol. 184:4783-4791.
-
(2002)
J. Bacteriol.
, vol.184
, pp. 4783-4791
-
-
Walker, K.A.1
Osuna, R.2
-
60
-
-
0035181320
-
Fis, a DNA nucleoid-associated protein, is involved in Salmonella typhimurium SPI-1 invasion gene expression
-
Wilson, R. L., S. J. Libby, A. M. Freet, J. D. Boddicker, T. F. Fahlen, and B. D. Jones. 2001. Fis, a DNA nucleoid-associated protein, is involved in Salmonella typhimurium SPI-1 invasion gene expression. Mol. Microbiol. 39:79-88.
-
(2001)
Mol. Microbiol.
, vol.39
, pp. 79-88
-
-
Wilson, R.L.1
Libby, S.J.2
Freet, A.M.3
Boddicker, J.D.4
Fahlen, T.F.5
Jones, B.D.6
-
61
-
-
0031974456
-
Regulation of transcription initiation at the Escherichia coli nir operon promoter: A new mechanism to account for co-dependence on two transcription factors
-
Wu, H., K. L. Tyson, J. A. Cole, and S. J. Busby. 1998. Regulation of transcription initiation at the Escherichia coli nir operon promoter: a new mechanism to account for co-dependence on two transcription factors. Mol. Microbiol. 27:493-505.
-
(1998)
Mol. Microbiol.
, vol.27
, pp. 493-505
-
-
Wu, H.1
Tyson, K.L.2
Cole, J.A.3
Busby, S.J.4
-
62
-
-
0025992789
-
Residual guanosine 3′,5′-bispyrophosphate synthetic activity of relA null mutants can be eliminated by spoT null mutations
-
Xiao, H., M. Kaiman, K. Ikehara, S. Zemel, G. Glaser, and M. Cashel. 1991. Residual guanosine 3′,5′-bispyrophosphate synthetic activity of relA null mutants can be eliminated by spoT null mutations. J. Biol. Chem. 266:5980-5990.
-
(1991)
J. Biol. Chem.
, vol.266
, pp. 5980-5990
-
-
Xiao, H.1
Kaiman, M.2
Ikehara, K.3
Zemel, S.4
Glaser, G.5
Cashel, M.6
-
63
-
-
0028816422
-
Identification of genes negatively regulated by Fis: Fis and RpoS comodulate growth-phase-dependent gene expression in Escherichia coli
-
Xu, J., and R. C. Johnson. 1995. Identification of genes negatively regulated by Fis: Fis and RpoS comodulate growth-phase-dependent gene expression in Escherichia coli. J. Bacteriol. 177:938-947.
-
(1995)
J. Bacteriol.
, vol.177
, pp. 938-947
-
-
Xu, J.1
Johnson, R.C.2
-
64
-
-
0036818941
-
Kinetic properties of rrn promoters in Escherichia coli
-
Zhang, X., P. Dennis, M. Ehrenberg, and H. Bremer. 2002. Kinetic properties of rrn promoters in Escherichia coli. Biochimie 84:981-996.
-
(2002)
Biochimie
, vol.84
, pp. 981-996
-
-
Zhang, X.1
Dennis, P.2
Ehrenberg, M.3
Bremer, H.4
-
65
-
-
0032539903
-
The rpoB mutants destabilizing initiation complexes at stringently controlled promoters behave like "stringent" RNA polymerases in Escherichia coli
-
Zhou, Y. N., and D. J. Jin. 1998. The rpoB mutants destabilizing initiation complexes at stringently controlled promoters behave like "stringent" RNA polymerases in Escherichia coli. Proc. Natl. Acad. Sci. USA 95:2908-2913.
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 2908-2913
-
-
Zhou, Y.N.1
Jin, D.J.2
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