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Volumn 185, Issue 1, 2003, Pages 28-34

Regulation of the Escherichia coli rrnB P2 promoter

Author keywords

[No Author keywords available]

Indexed keywords

RIBOSOME RNA;

EID: 0037215597     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/JB.185.1.28-34.2003     Document Type: Article
Times cited : (37)

References (41)
  • 1
    • 0031970775 scopus 로고    scopus 로고
    • Effects of the Escherichia coli DNA-binding protein H-NS on rRNA synthesis in vivo
    • Afflerbach, H., O. Schroder, and R. Wagner. 1998. Effects of the Escherichia coli DNA-binding protein H-NS on rRNA synthesis in vivo. Mol. Microbiol. 28:641-653.
    • (1998) Mol. Microbiol. , vol.28 , pp. 641-653
    • Afflerbach, H.1    Schroder, O.2    Wagner, R.3
  • 2
    • 0035951301 scopus 로고    scopus 로고
    • Mechanism of regulation of transcription initiation by ppGpp. II. Models for positive control based on properties of RNAP mutants and competition for RNAP
    • Barker, M. M., T. Gaal, and R. L. Gourse. 2001. Mechanism of regulation of transcription initiation by ppGpp. II. Models for positive control based on properties of RNAP mutants and competition for RNAP. J. Mol. Biol. 305:689-702.
    • (2001) J. Mol. Biol. , vol.305 , pp. 689-702
    • Barker, M.M.1    Gaal, T.2    Gourse, R.L.3
  • 3
    • 0035951305 scopus 로고    scopus 로고
    • Mechanism of regulation of transcription initiation by ppGpp. I. Effects of ppGpp on transcription initiation in vivo and in vitro
    • Barker, M. M., T. Gaal, C. A. Josaitis, and R. L. Gourse. 2001. Mechanism of regulation of transcription initiation by ppGpp. I. Effects of ppGpp on transcription initiation in vivo and in vitro. J. Mol. Biol. 305:673-688.
    • (2001) J. Mol. Biol. , vol.305 , pp. 673-688
    • Barker, M.M.1    Gaal, T.2    Josaitis, C.A.3    Gourse, R.L.4
  • 4
    • 0035685975 scopus 로고    scopus 로고
    • Regulation of rRNA transcription correlates with nucleoside triphosphate sensing
    • Barker, M. M., and R. L. Gourse. 2001. Regulation of rRNA transcription correlates with nucleoside triphosphate sensing. J. Bacteriol. 183:6315-6323.
    • (2001) J. Bacteriol. , vol.183 , pp. 6315-6323
    • Barker, M.M.1    Gourse, R.L.2
  • 5
    • 0032486142 scopus 로고    scopus 로고
    • RNA polymerase mutants that destabilize RNA polymerase-promoter complexes alter NTP-sensing by rrn P1 promoters
    • Bartlett, M. S., T. Gaal, W. Ross, and R. L. Gourse. 1998. RNA polymerase mutants that destabilize RNA polymerase-promoter complexes alter NTP-sensing by rrn P1 promoters. J. Mol. Biol. 279:331-345.
    • (1998) J. Mol. Biol. , vol.279 , pp. 331-345
    • Bartlett, M.S.1    Gaal, T.2    Ross, W.3    Gourse, R.L.4
  • 6
    • 0003174053 scopus 로고    scopus 로고
    • The stringent response
    • F. C. Neidhardt, R. Curtiss III, J. L. Ingraham, E. C. C. Lin, K. B. Low, B. Magasanik, W. S. Reznikoff, M. Riley, M. Schaechter, and J. E. Umbarger (ed.). ASM Press, Washington, D.C.
    • Cashel, M., D. R. Gentry, V. H. Hernandez, and D. Vinella. 1996. The stringent response, p. 1458-1496. In F. C. Neidhardt, R. Curtiss III, J. L. Ingraham, E. C. C. Lin, K. B. Low, B. Magasanik, W. S. Reznikoff, M. Riley, M. Schaechter, and J. E. Umbarger (ed.), Escherichia Coli and Salmonella: Cellular and Molecular Biology, vol. 1. ASM Press, Washington, D.C.
    • (1996) Escherichia Coli and Salmonella: Cellular and Molecular Biology , vol.1 , pp. 1458-1496
    • Cashel, M.1    Gentry, D.R.2    Hernandez, V.H.3    Vinella, D.4
  • 7
    • 0018308481 scopus 로고
    • In vivo transcription of rRNA operons in Escherichia coli initiates with purine nucleoside triphosphates at the first promoter and with CTP at the second promoter
    • de Boer, H., and M. Nomura. 1979. In vivo transcription of rRNA operons in Escherichia coli initiates with purine nucleoside triphosphates at the first promoter and with CTP at the second promoter. J. Biol. Chem. 254:5609-5612.
    • (1979) J. Biol. Chem. , vol.254 , pp. 5609-5612
    • De Boer, H.1    Nomura, M.2
  • 8
    • 0024726281 scopus 로고
    • Identification of promoter mutants defective in growth-rate-dependent regulation of rRNA transcription in Escherichia coli
    • Dickson, R. R., T. Gaal, H. A. deBoer, P. L. deHaseth, and R. L. Gourse. 1989. Identification of promoter mutants defective in growth-rate-dependent regulation of rRNA transcription in Escherichia coli. J. Bacteriol. 171:4862-4870.
    • (1989) J. Bacteriol. , vol.171 , pp. 4862-4870
    • Dickson, R.R.1    Gaal, T.2    DeBoer, H.A.3    DeHaseth, P.L.4    Gourse, R.L.5
  • 9
    • 0031443321 scopus 로고    scopus 로고
    • Transcription regulation by initiating NTP concentration: rRNA synthesis in bacteria
    • Gaal, T., M. S. Bartlett, W. Ross, C. L. Turnbough, Jr., and R. L. Gourse. 1997. Transcription regulation by initiating NTP concentration: rRNA synthesis in bacteria. Science 278:2092-2097.
    • (1997) Science , vol.278 , pp. 2092-2097
    • Gaal, T.1    Bartlett, M.S.2    Ross, W.3    Turnbough C.L., Jr.4    Gourse, R.L.5
  • 10
    • 0025102288 scopus 로고
    • Guanosine 3′-diphosphate 5′-diphosphate is not required for growth rate-dependent control of rRNA synthesis in Escherichia coli
    • Gaal, T., and R. L. Gourse. 1990. Guanosine 3′-diphosphate 5′-diphosphate is not required for growth rate-dependent control of rRNA synthesis in Escherichia coli. Proc. Natl. Acad. Sci. USA 87:5533-5537.
    • (1990) Proc. Natl. Acad. Sci. USA , vol.87 , pp. 5533-5537
    • Gaal, T.1    Gourse, R.L.2
  • 11
    • 0028019112 scopus 로고
    • Isolated P2 rRNA promoters of E. coli are strong promoters that are subject to stringent control
    • Gafny, R. S., S. Cohen, N. Nachaliel, and G. Glaser. 1994. Isolated P2 rRNA promoters of E. coli are strong promoters that are subject to stringent control. J. Mol. Biol. 243:152-156.
    • (1994) J. Mol. Biol. , vol.243 , pp. 152-156
    • Gafny, R.S.1    Cohen, S.2    Nachaliel, N.3    Glaser, G.4
  • 12
    • 0022475085 scopus 로고
    • DNA determinants of rRNA synthesis in E. coli: Growth rate dependent regulation, feedback inhibition, upstream activation, antitermination
    • Gourse, R. L., H. A. de Boer, and M. Nomura. 1986. DNA determinants of rRNA synthesis in E. coli: Growth rate dependent regulation, feedback inhibition, upstream activation, antitermination. Cell 44:197-205.
    • (1986) Cell , vol.44 , pp. 197-205
    • Gourse, R.L.1    De Boer, H.A.2    Nomura, M.3
  • 13
    • 0029820872 scopus 로고    scopus 로고
    • rRNA transcription and growth rate-dependent regulation of ribosome synthesis in Escherichia coli
    • Gourse, R. L., T. Gaal, M. S. Bartlett, J. A. Appleman, and W. Ross. 1996. rRNA transcription and growth rate-dependent regulation of ribosome synthesis in Escherichia coli. Annu. Rev. Microbiol. 50:645-677.
    • (1996) Annu. Rev. Microbiol. , vol.50 , pp. 645-677
    • Gourse, R.L.1    Gaal, T.2    Bartlett, M.S.3    Appleman, J.A.4    Ross, W.5
  • 14
    • 0020789028 scopus 로고
    • Expression of rRNA and tRNA genes in Escherichia coli: Evidence for feedback regulation by products of rRNA operons
    • Jinks-Robertson, S., R. L. Gourse, and M. Nomura. 1983. Expression of rRNA and tRNA genes in Escherichia coli: Evidence for feedback regulation by products of rRNA operons. Cell 33:865-876.
    • (1983) Cell , vol.33 , pp. 865-876
    • Jinks-Robertson, S.1    Gourse, R.L.2    Nomura, M.3
  • 15
    • 0028840061 scopus 로고
    • Stringent control and growth-rate-dependent control have nonidentical promoter sequence requirements
    • Josaitis, C. A., T. Gaal, and R. L. Gourse. 1995. Stringent control and growth-rate-dependent control have nonidentical promoter sequence requirements. Proc. Natl. Acad. Sci. USA 92:1117-1121.
    • (1995) Proc. Natl. Acad. Sci. USA , vol.92 , pp. 1117-1121
    • Josaitis, C.A.1    Gaal, T.2    Gourse, R.L.3
  • 16
    • 0000847987 scopus 로고    scopus 로고
    • Regulation of ribosome synthesis
    • F. C. Neidhardt, R. Curtiss III, J. L. Ingraham, E. C. C. Lin, K. B. Low, B. Magasanik, W. S. Reznikoff, M. Riley, M. Schaechter, and J. E. Umbarger (ed.). ASM Press, Washington, D.C.
    • Keener, J., and M. Nomura. 1996. Regulation of ribosome synthesis, p. 1417-1428. In F. C. Neidhardt, R. Curtiss III, J. L. Ingraham, E. C. C. Lin, K. B. Low, B. Magasanik, W. S. Reznikoff, M. Riley, M. Schaechter, and J. E. Umbarger (ed.), Escherichia Coli and Salmonella: Cellular and Molecular Biology, vol. 1. ASM Press, Washington, D.C.
    • (1996) Escherichia Coli and Salmonella: Cellular and Molecular Biology , vol.1 , pp. 1417-1428
    • Keener, J.1    Nomura, M.2
  • 19
    • 0028895026 scopus 로고
    • Effects of different growth conditions on the in vivo activity of the tandem Escherichia coli ribosomal RNA promoters P1 and P2
    • Liebig, B., and R. Wagner. 1995. Effects of different growth conditions on the in vivo activity of the tandem Escherichia coli ribosomal RNA promoters P1 and P2. Mol. Gen. Genet. 249:328-335.
    • (1995) Mol. Gen. Genet. , vol.249 , pp. 328-335
    • Liebig, B.1    Wagner, R.2
  • 20
    • 2642634445 scopus 로고
    • Initiation of Escherichia coli ribosomal RNA synthesis in vivo
    • Lund, E., and J. E. Dahlberg. 1979. Initiation of Escherichia coli ribosomal RNA synthesis in vivo. Proc. Natl. Acad. Sci. USA 76:5480-5484.
    • (1979) Proc. Natl. Acad. Sci. USA , vol.76 , pp. 5480-5484
    • Lund, E.1    Dahlberg, J.E.2
  • 21
  • 22
    • 0019501853 scopus 로고
    • Growth rate-dependent regulation of ribosome synthesis in E. coli: Expression of the lacZ and galK genes fused to ribosomal promoters
    • Miura, A., J. H. Krueger, S. Itoh, H. A. deBoer, and M. Nomura. 1981. Growth rate-dependent regulation of ribosome synthesis in E. coli: Expression of the lacZ and galK genes fused to ribosomal promoters. Cell 25:773-782.
    • (1981) Cell , vol.25 , pp. 773-782
    • Miura, A.1    Krueger, J.H.2    Itoh, S.3    DeBoer, H.A.4    Nomura, M.5
  • 24
    • 0028785899 scopus 로고
    • Structure of open promoter complexes with Escherichia coli RNA polymerase as revealed by the DNase I footprinting technique: Compilation analysis
    • Ozoline, O. N., and M. A. Tsyganov. 1995. Structure of open promoter complexes with Escherichia coli RNA polymerase as revealed by the DNase I footprinting technique: Compilation analysis, Nucleic Acids Res. 23:4533-4541.
    • (1995) Nucleic Acids Res. , vol.23 , pp. 4533-4541
    • Ozoline, O.N.1    Tsyganov, M.A.2
  • 25
    • 0032862322 scopus 로고    scopus 로고
    • Multiple mechanisms are used for growth rate and stringent control of leuV transcriptional initiation in Escherichia coli
    • Pokholok, D. K., M. Redlak, C. L. Turnbough, Jr., S. Dylla, and W. M. Holmes. 1999. Multiple mechanisms are used for growth rate and stringent control of leuV transcriptional initiation in Escherichia coli. J. Bacteriol. 181:5771-5782.
    • (1999) J. Bacteriol. , vol.181 , pp. 5771-5782
    • Pokholok, D.K.1    Redlak, M.2    Turnbough C.L., Jr.3    Dylla, S.4    Holmes, W.M.5
  • 26
    • 0028230951 scopus 로고
    • Factor independent activation of rrnB P1. An "extended" promoter with an upstream element that dramatically increases promoter strength
    • , Rao, L., W. Ross, J. A. Appleman, T. Gaal, S. Leirmo, P. J. Schlax, M. T. Record, Jr., and R. L. Gourse. 1994. Factor independent activation of rrnB P1. An "extended" promoter with an upstream element that dramatically increases promoter strength. J. Mol. Biol. 235:1421-1435.
    • (1994) J. Mol. Biol. , vol.235 , pp. 1421-1435
    • Rao, L.1    Ross, W.2    Appleman, J.A.3    Gaal, T.4    Leirmo, S.5    Schlax, P.J.6    Record M.T., Jr.7    Gourse, R.L.8
  • 27
    • 0031691355 scopus 로고    scopus 로고
    • Escherichia coli promoters with UP elements of different strengths: Modular structure of bacterial promoters
    • Ross, W., S. E. Aiyar, J. Salomon, and R. L. Gourse. 1998. Escherichia coli promoters with UP elements of different strengths: Modular structure of bacterial promoters. J. Bacteriol. 180:5375-5383.
    • (1998) J. Bacteriol. , vol.180 , pp. 5375-5383
    • Ross, W.1    Aiyar, S.E.2    Salomon, J.3    Gourse, R.L.4
  • 28
    • 0027761839 scopus 로고
    • A third recognition element in bacterial promoters: DNA binding by the alpha subunit of RNA polymerase
    • Ross, W., K. K. Gosink, J. Salomon, K. Igarashi, C. Zou, A. Ishihama, K. Severinov, and R. L. Gourse. 1993. A third recognition element in bacterial promoters: DNA binding by the alpha subunit of RNA polymerase. Science 262:1407-1413.
    • (1993) Science , vol.262 , pp. 1407-1413
    • Ross, W.1    Gosink, K.K.2    Salomon, J.3    Igarashi, K.4    Zou, C.5    Ishihama, A.6    Severinov, K.7    Gourse, R.L.8
  • 29
    • 0025163439 scopus 로고
    • E. coli Fis protein activates ribosomal RNA transcription in vitro and in vivo
    • Ross, W., J. F. Thompson, J. T. Newlands, and R. L. Gourse. 1990. E. coli Fis protein activates ribosomal RNA transcription in vitro and in vivo. EMBO J. 9:3733-3742.
    • (1990) EMBO J. , vol.9 , pp. 3733-3742
    • Ross, W.1    Thompson, J.F.2    Newlands, J.T.3    Gourse, R.L.4
  • 30
    • 0020415822 scopus 로고
    • Control of rRNA and tRNA syntheses in Escherichia coli by guanosine tetraphosphate
    • Ryals, J., R. Little, and H. Bremer. 1982. Control of rRNA and tRNA syntheses in Escherichia coli by guanosine tetraphosphate. J. Bacteriol. 151:1261-1268.
    • (1982) J. Bacteriol. , vol.151 , pp. 1261-1268
    • Ryals, J.1    Little, R.2    Bremer, H.3
  • 31
    • 0021060769 scopus 로고
    • Carbon starvation and growth rate-dependent regulation of the Escherichia coli ribosomal RNA promoters: Differential control of dual promoters
    • Sarmientos, P., and M. Cashel. 1983. Carbon starvation and growth rate-dependent regulation of the Escherichia coli ribosomal RNA promoters: Differential control of dual promoters. Proc. Natl. Acad. Sci. USA 80:7010-7013.
    • (1983) Proc. Natl. Acad. Sci. USA , vol.80 , pp. 7010-7013
    • Sarmientos, P.1    Cashel, M.2
  • 32
    • 0012193842 scopus 로고
    • Ribosomal RNA operon promoters P1 and P2 show differential regulatory responses
    • D. H. Hamer and M. Rosenburg (ed.). Alan R. Liss, Inc., New York, N.Y.
    • Sarmientos, P., S. Contente, G. Chinali, and M. Cashel. 1983. Ribosomal RNA operon promoters P1 and P2 show differential regulatory responses, p. 65-74. In D. H. Hamer and M. Rosenburg (ed.), Gene Expression. Alan R. Liss, Inc., New York, N.Y.
    • (1983) Gene Expression , pp. 65-74
    • Sarmientos, P.1    Contente, S.2    Chinali, G.3    Cashel, M.4
  • 33
    • 0020741846 scopus 로고
    • Differential stringent control of the tandem E. coli ribosomal RNA promoters from the rrnA operon expressed in vivo in multicopy plasmids
    • Sarmientos, P., J. E. Sylvester, S. Contente, and M. Cashel. 1983. Differential stringent control of the tandem E. coli ribosomal RNA promoters from the rrnA operon expressed in vivo in multicopy plasmids. Cell 32:1337-1346.
    • (1983) Cell , vol.32 , pp. 1337-1346
    • Sarmientos, P.1    Sylvester, J.E.2    Contente, S.3    Cashel, M.4
  • 34
    • 0025153881 scopus 로고
    • More than just "histone-like" proteins
    • Schmid, M. B. 1990. More than just "histone-like" proteins. Cell 63:451-453.
    • (1990) Cell , vol.63 , pp. 451-453
    • Schmid, M.B.1
  • 35
    • 0037172994 scopus 로고    scopus 로고
    • NTP-sensing by rRNA promoters in Escherichia coli is direct
    • Schneider, D. A., T. Gaal, and R. L. Gourse. 2002. NTP-sensing by rRNA promoters in Escherichia coli is direct. Proc. Natl. Acad. Sci. USA 99:8602-8607.
    • (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 8602-8607
    • Schneider, D.A.1    Gaal, T.2    Gourse, R.L.3
  • 36
    • 0028306747 scopus 로고
    • Evidence for a regulatory function of the histone-like Escherichia coli protein H-NS in ribosomal RNA synthesis
    • Tippner, D., H. Afflerbach, C. Bradaczek, and R. Wagner. 1994. Evidence for a regulatory function of the histone-like Escherichia coli protein H-NS in ribosomal RNA synthesis. Mol. Microbiol. 11:589-604.
    • (1994) Mol. Microbiol. , vol.11 , pp. 589-604
    • Tippner, D.1    Afflerbach, H.2    Bradaczek, C.3    Wagner, R.4
  • 37
    • 0015079354 scopus 로고
    • Biochemical bases for the antimetabolite action of L-serine hydroxamate
    • Tosa, T., and L. I. Pizer. 1971. Biochemical bases for the antimetabolite action of L-serine hydroxamate. J. Bacteriol. 106:972-982.
    • (1971) J. Bacteriol. , vol.106 , pp. 972-982
    • Tosa, T.1    Pizer, L.I.2
  • 38
    • 0021771148 scopus 로고
    • Conserved features of coordinately regulated E. coli promoters
    • Travers, A. A. 1984. Conserved features of coordinately regulated E. coli promoters. Nucleic Acids Res. 12:2605-2618.
    • (1984) Nucleic Acids Res. , vol.12 , pp. 2605-2618
    • Travers, A.A.1
  • 39
    • 0025992789 scopus 로고
    • Residual guanosine 3′,5′-bispyrophosphate synthetic activity of relA null mutants can be eliminated by spoT null mutations
    • Xiao, H., M. Kalman, K. Ikehara, S. Zemel, G. Glaser, and M. Cashel. 1991. Residual guanosine 3′,5′-bispyrophosphate synthetic activity of relA null mutants can be eliminated by spoT null mutations. J. Biol. Chem. 266:5980-5990.
    • (1991) J. Biol. Chem. , vol.266 , pp. 5980-5990
    • Xiao, H.1    Kalman, M.2    Ikehara, K.3    Zemel, S.4    Glaser, G.5    Cashel, M.6
  • 40
    • 0024446071 scopus 로고
    • Influence of the GCGC discriminator motif introduced into the ribosomal RNA P2- and tac promoter on growth-rate control and stringent sensitivity
    • Zacharias, M., H. U. Goringer, and R. Wagner. 1989. Influence of the GCGC discriminator motif introduced into the ribosomal RNA P2- and tac promoter on growth-rate control and stringent sensitivity. EMBO J. 8:3357-3363.
    • (1989) EMBO J. , vol.8 , pp. 3357-3363
    • Zacharias, M.1    Goringer, H.U.2    Wagner, R.3
  • 41
    • 0029019484 scopus 로고
    • Control of the Escherichia coli rrnB P1 promoter strength by ppGpp
    • Zhang, X., and H. Bremer. 1995. Control of the Escherichia coli rrnB P1 promoter strength by ppGpp. J. Biol. Chem. 270:11181-11189.
    • (1995) J. Biol. Chem. , vol.270 , pp. 11181-11189
    • Zhang, X.1    Bremer, H.2


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