APOBEC3 cytidine deaminases: Distinct antiviral actions along the retroviral life cycle

Journal of Biological Chemistry

Volumn 281, Issue 13, 2006, Pages 8309-8312

  Chiu, Ya Lin ^a   Greene, Warner C ^a,b  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b GLADSTONE INSTITUTE OF VIROLOGY AND IMMUNOLOGY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CELLS; DRUG THERAPY; GENES; IMMUNOLOGY; MOLECULAR BIOLOGY; VIRUSES;

CYTIDINE; GENE THERAPY; RETROVIRAL LIFE CYCLE;

ENZYME KINETICS;

APOLIPOPROTEIN B MESSENGER RNA EDITING ENZYME CATALYTIC POLYPEPTIDE 3; APOLIPOPROTEIN B MESSENGER RNA EDITING ENZYME CATALYTIC POLYPEPTIDE 3F; APOLIPOPROTEIN B MESSENGER RNA EDITING ENZYME CATALYTIC POLYPEPTIDE 3G; CYTIDINE DEAMINASE; UNCLASSIFIED DRUG; ANTIVIRUS AGENT; APOBEC3 PROTEIN, HUMAN; CYTOSINE DEAMINASE;

ANTIVIRAL ACTIVITY; HUMAN IMMUNODEFICIENCY VIRUS; HUMAN IMMUNODEFICIENCY VIRUS 1; LIFE CYCLE; NONHUMAN; PRIORITY JOURNAL; RETROVIRUS; SHORT SURVEY; T LYMPHOCYTE; VIRUS REPLICATION; BIOLOGICAL MODEL; DRUG EFFECT; GENETICS; HUMAN; METABOLISM; REVIEW;

HUMAN IMMUNODEFICIENCY VIRUS;

ANTIVIRAL AGENTS; CYTIDINE DEAMINASE; CYTOSINE DEAMINASE; HUMANS; MODELS, BIOLOGICAL; RETROVIRIDAE;

EID: 33646825049     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.R500021200     Document Type: Short Survey

References (83)

1. Gabuzda, D. H., Lawrence, K., Langhoff, E., Terwilliger, E., Dorfman, T., Haseltine, W. A., and Sodroski, J. (1992) J. Virol. 66, 6489-6495
2. Sova, P., and Volsky, D. J. (1993) J. Virol. 67, 6322-6326
3. Madani, N., and Kabat, D. (1998) J. Virol. 72, 10251-10255
4. Simon, J. H., Gaddis, N. C., Fouchier, R. A., and Malim, M. H. (1998) Nat. Med. 4, 1397-1400
5. Sheehy, A. M., Gaddis, N. C., Choi, J. D., and Malim, M. H. (2002) Nature 418, 646-650
6. Mariani, R., Chen, D., Schrofelbauer, B., Navarro, F., Konig, R., Bollman, B., Munk, C., Nymark-McMahon, H., and Landau, N. R. (2003) Cell 114, 21-31
7. Stopak, K., de Noronha, C., Yonemoto, W., and Greene, W. C. (2003) Mol. Cell 12, 591-601
8. Jarmuz, A., Chester, A., Bayliss, J., Gisbourne, J., Dunham, I., Scott, J., and Navaratnam, N. (2002) Genomics 79, 285-296
9. Teng, B. B., Ochsner, S., Zhang, Q., Soman, K. V., Lau, P. P., and Chan, L. (1999) J. Lipid Res. 40, 623-635
10. Harris, R. S., Petersen-Mahrt, S. K., and Neuberger, M. S. (2002) Mol. Cell 10, 1247-1253
11. Muramatsu, M., Kinoshita, K., Fagarasan, S., Yamada, S., Shinkai, Y., and Honjo, T. (2000) Cell 102, 553-563
12. Chester, A., Weinreb, V., Carter, C. W., Jr., and Navaratnam, N. (2004) RNA (N. Y.) 10, 1399-1411
13. Beale, R. C., Petersen-Mahrt, S. K., Watt, I. N., Harris, R. S., Rada, C., and Neuberger, M. S. (2004) J. Mol. Biol. 337, 585-596
14. Navaratnam, N., Fujino, T., Bayliss, J., Jarmuz, A., How, A., Richardson, N., Somasekaram, A., Bhattacharya, S., Carter, C., and Scott, J. (1998) J. Mol. Biol. 275, 695-714
15. Bransteitter, R., Pham, P., Scharff, M. D., and Goodman, M. F. (2003) Proc. Natl. Acad. Sci. U. S. A. 100, 4102-4107
16. Yamanaka, S., Balestra, M. E., Ferrell, L. D., Fan, J., Arnold, K. S., Taylor, S., Taylor, J. M., and Innerarity, T. L. (1995) Proc. Natl. Acad. Sci. U. S. A. 92, 8483-8487
17. Okazaki, I. M., Hiai, H., Kakazu, N., Yamada, S., Muramatsu, M., Kinoshita, K., and Honjo, T. (2003) J. Exp. Med. 197, 1173-1181
18. Bishop, K. N., Holmes, R. K., Sheehy, A. M., Davidson, N. O., Cho, S. J., and Malim, M. H. (2004) Curr. Biol. 14, 1392-1396
19. Cen, S., Guo, F., Niu, M., Saadatmand, J., Deflassieux, J., and Kleiman, L. (2004) J. Biol. Chem. 279, 33177-33184
20. Svarovskaia, E. S., Xu, H., Mbisa, J. L., Barr, R., Gorelick, R. J., Ono, A., Freed, E. O., Hu, W. S., and Pathak, V. K. (2004) J. Biol. Chem. 279, 35822-35828
21. Luo, K., Liu, B., Xiao, Z., Yu, Y., Yu, X., Gorelick, R., and Yu, X. F. (2004) J. Virol. 78, 11841-11852
22. Khan, M. A., Kao, S., Miyagi, E., Takeuchi, H., Goila-Gaur, R., Opi, S., Gipson, C. L., Parslow, T. G., Ly, H., and Strebel, K. (2005) J. Virol. 79, 5870-5874
23. Schafer, A., Bogerd, H. P., and Cullen, B. R. (2004) Virology 328, 163-168
24. Alce, T. M., and Popik, W. (2004) J. Biol. Chem. 279, 34083-34086
25. Douaisi, M., Dussart, S., Courcoul, M., Bessou, G., Vigne, R., and Decroly, E. (2004) Biochem. Biophys. Res. Commun. 321, 566-573
26. Zennou, V., Perez-Caballero, D., Gottlinger, H., and Bieniasz, P. D. (2004) J. Virol. 78, 12058-12061
27. Yu, Q., Konig, R., Pillai, S., Chiles, K., Kearney, M., Palmer, S., Richman, D., Coffin, J. M., and Landau, N. R. (2004) Nat. Struct. Mol. Biol. 11, 435-442
28. Suspene, R., Sommer, P., Henry, M., Ferris, S., Guetard, D., Pochet, S., Chester, A., Navaratnam, N., Wain-Hobson, S., and Vartanian, J. P. (2004) Nucleic Acids Res. 32, 2421-2429
29. Mangeat, B., Turelli, P., Caron, G., Friedli, M., Perrin, L., and Trono, D. (2003) Nature 424, 99-103
30. Lecossier, D., Bouchonnet, F., Clavel, F., and Hance, A. J. (2003) Science 300, 1112
31. Harris, R. S., Bishop, K. N., Sheehy, A. M., Craig, H. M., Petersen-Mahrt, S. K., Watt, I. N., Neuberger, M. S., and Malim, M. H. (2003) Cell 113, 803-809
32. Zhang, H., Yang, B., Pomerantz, R. J., Zhang, C., Arunachalam, S. C., and Gao, L. (2003) Nature 424, 94-98
33. Schrofelbauer, B., Yu, Q., Zeitlin, S. G., and Landau, N. R. (2005) J. Virol. 79, 10978-10987
34. Lochelt, M., Romen, F., Bastone, P., Muckenfuss, H., Kirchner, N., Kim, Y. B., Truyen, U., Rosler, U., Battenberg, M., Saib, A., Flory, E., Cichutek, K., and Munk, C. (2005) Proc. Natl. Acad. Sci. U. S. A. 102, 7982-7987
35. Russell, R. A., Wiegand, H. L., Moore, M. D., Schafer, A., McClure, M. O., and Cullen, B. R. (2005) J. Virol. 79, 8724-8731
36. Liddament, M. T., Brown, W. L., Schumacher, A. J., and Harris, R. S. (2004) Curr. Biol. 14, 1385-1391
37. Wiegand, H. L., Doehle, B. P., Bogerd, H. P., and Cullen, B. R. (2004) EMBO J. 23, 2451-2458
38. Zheng, Y. H., Irwin, D., Kurosu, T., Tokunaga, K., Sata, T., and Peterlin, B. M. (2004) J. Virol. 78, 6073-6076
39. Hache, G., Liddament, M. T., and Harris, R. S. (2005) J. Biol. Chem. 280, 10920-10924
40. Doehle, B. P., Schafer, A., and Cullen, B. R. (2005) Virology 339, 281-288
41. Doehle, B. P., Schafer, A., Wiegand, H. L., Bogerd, H. P., and Cullen, B. R. (2005) J. Virol. 79, 8201-8207
42. Kao, S., Khan, M. A., Miyagi, E., Plishka, R., Buckler-White, A., and Strebel, K. (2003) J. Virol. 77, 11398-11407
43. Conticello, S. G., Harris, R. S., and Neuberger, M. S. (2003) Curr. Biol. 13, 2009-2013
44. Mehle, A., Strack, B., Ancuta, P., Zhang, C., McPike, M., and Gabuzda, D. (2004) J. Biol. Chem. 279, 7792-7798
45. Marin, M., Rose, K. M., Kozak, S. L., and Kabat, D. (2003) Nat. Med. 9, 1398-1403
46. Sheehy, A. M., Gaddis, N. C., and Malim, M. H. (2003) Nat. Med. 9, 1404-1407
47. Yu, X., Yu, Y., Liu, B., Luo, K., Kong, W., Mao, P., and Yu, X. F. (2003) Science 302, 1056-1060
48. Yu, Y., Xiao, Z., Ehrlich, E. S., Yu, X., and Yu, X. F. (2004) Genes Dev. 18, 2867-2872
49. Mehle, A., Goncalves, J., Santa-Marta, M., McPike, M., and Gabuzda, D. (2004) Genes Dev. 18, 2861-2866
50. Liu, B., Sarkis, P. T., Luo, K., Yu, Y., and Yu, X. F. (2005) J. Virol. 79, 9579-9587
51. Bogerd, H. P., Doehle, B. P., Wiegand, H. L., and Cullen, B. R. (2004) Proc. Natl. Acad. Sci. U. S. A. 101, 3770-3774
52. Mangeat, B., Turelli, P., Liao, S., and Trono, D. (2004) J. Biol. Chem. 279, 14481-14483
53. Schrofelbauer, B., Chen, D., and Landau, N. R. (2004) Proc. Natl. Acad. Sci. U. S. A. 101, 3927-3932
54. Xu, H., Svarovskaia, E. S., Barr, R., Zhang, Y., Khan, M. A., Strebel, K., and Pathak, V. K. (2004) Proc. Natl. Acad. Sci. U. S. A. 101, 5652-5657
55. Kao, S., Miyagi, E., Khan, M. A., Takeuchi, H., Opi, S., Goila-Gaur, R., and Strebel, K. (2004) Retrovirology 1, 27
56. Kobayashi, M., Takaori-Kondo, A., Shindo, K., Abudu, A., Fukunaga, K., and Uchiyama, T. (2004) J. Virol. 78, 8238-8244
57. Chiu, Y. L., Soros, V. B., Kreisberg, J. F., Stopak, K., Yonemoto, W., and Greene, W. C. (2005) Nature 435, 108-114
58. Korin, Y. D., and Zack, J. A. (1998) J. Virol. 72, 3161-3168
59. Zack, J. A., Arrigo, S. J., Weitsman, S. R., Go, A. S., Haislip, A., and Chen, I. S. (1990) Cell 61, 213-222
60. Stevenson, M., Stanwick, T. L., Dempsey, M. P., and Lamonica, C. A. (1990) EMBO J. 9, 1551-1560
61. Neil, S., Martin, F., Ikeda, Y., and Collins, M. (2001) J. Virol. 75, 5448-5456
62. Triques, K., and Stevenson, M. (2004) J. Virol. 78, 5523-5527
63. Newman, E. N., Holmes, R. K., Craig, H. M., Klein, K. C., Lingappa, J. R., Malim, M. H., and Sheehy, A. M. (2005) Curr. Biol. 15, 166-170
64. Turelli, P., Mangeat, B., Jost, S., Vianin, S., and Trono, D. (2004) Science 303, 1829
65. Turelli, P., Jost, S., Mangeat, B., and Trono, D. (2004) Science 305, 1403b
66. Rosler, C., Kock, J., Malim, M. H., Blum, H. E., and von Weizsacker, F. (2004) Science 305, 1403a
67. Rosler, C., Kock, J., Kann, M., Malim, M. H., Blum, H. E., Baumert, T. F., and von Weizsacker, F. (2005) Hepatology 42, 301-309
68. Suspene, R., Henry, M., Guillot, S., Wain-Hobson, S., and Vartanian, J. P. (2005) J. Gen. Virol. 86, 125-129
69. Suspene, R., Guetard, D., Henry, M., Sommer, P., Wain-Hobson, S., and Vartanian, J. P. (2005) Proc. Natl. Acad. Sci. U. S. A. 102, 8321-8326
70. Sasada, A., Takaori-Kondo, A., Shirakawa, K., Kobayashi, M., Abudu, A., Hishizawa, M., Imada, K., Tanaka, Y., and Uchiyama, T. (2005) Retrovirology 2, 32
71. Navarro, F., Bollman, B., Chen, H., Konig, R., Yu, Q., Chiles, K., and Landau, N. R. (2005) Virology 333, 374-386
72. Kazazian, H. H. J. (2004) Science 303, 1626-1632
73. Esnault, C., Heidmann, O., Delebecque, F., Dewannieux, M., Ribet, D., Hance, A. J., Heidmann, T., and Schwartz, O. (2005) Nature 433, 430-433
74. Schumacher, A. J., Nissley, D. V., and Harris, R. S. (2005) Proc. Natl. Acad. Sci. U. S. A. 102, 9854-9859
75. Dutko, J. A., Schafer, A., Kenny, A. E., Cullen, B. R., and Curcio, M. J. (2005) Curr. Biol. 15, 661-666
76. Zhang, J., and Webb, D. M. (2004) Hum. Mol. Genet. 13, 1785-1791
77. Sawyer, S. L., Emerman, M., and Malik, H. S. (2004) PLoS Biol. 2, E275
78. Turelli, P., Vianin, S., and Trono, D. (2004) J. Biol. Chem. 279, 43371-43373
79. Rose, K. M., Marin, M., Kozak, S. L., and Kabat, D. (2004) J. Biol. Chem. 279, 41744-41749
80. Unutmaz, D., KewalRamani, V. N., Marmon, S., and Littman, D. R. (1999) J. Exp. Med. 189, 1735-1746
81. Ducrey-Rundquist, O., Guyader, M., and Trono, D. (2002) J. Virol. 76, 9103-9111
82. Wichroski, M. J., Ichiyama, K., and Rana, T. M. (2005) J. Biol. Chem. 280, 8387-8396
83. Guidotti L. G., Rochford, R., Chung, J., Shapiro, M., Purcell, R., and Chisari, F. V. (1999) Science 284, 825-829