메뉴 건너뛰기




Volumn 34, Issue 6, 2006, Pages 1900-1911

Molecular basis of the targeting of topoisomerase II-mediated DNA cleavage by VP16 derivatives conjugated to triplex-forming oligonucleotides

Author keywords

[No Author keywords available]

Indexed keywords

DNA; DNA TOPOISOMERASE (ATP HYDROLYSING); DOUBLE STRANDED DNA; ETOPOSIDE DERIVATIVE; OLIGONUCLEOTIDE; ANTINEOPLASTIC AGENT; DRUG DERIVATIVE; ENZYME INHIBITOR; ETOPOSIDE; OLIGODEOXYRIBONUCLEOTIDE; TRIPLEX DNA;

EID: 33645819360     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkl126     Document Type: Article
Times cited : (31)

References (46)
  • 1
    • 0034923502 scopus 로고    scopus 로고
    • DNA topoisomerases: Structure, function, and mechanism
    • Champoux,J.J. (2001) DNA topoisomerases: Structure, function, and mechanism. Annu. Rev. Biochem, 70, 369-413.
    • (2001) Annu. Rev. Biochem , vol.70 , pp. 369-413
    • Champoux, J.J.1
  • 2
    • 0036085460 scopus 로고    scopus 로고
    • Cellular roles of DNA topoisomerases: A molecular perspective
    • Wang,J.C. (2002) Cellular roles of DNA topoisomerases: A molecular perspective. Nature Rev. Mol. Cell. Biol, 3, 430-440.
    • (2002) Nature Rev. Mol. Cell. Biol , vol.3 , pp. 430-440
    • Wang, J.C.1
  • 3
    • 0030014783 scopus 로고    scopus 로고
    • DNA topoisomerases
    • Wang,J.C. (1996) DNA topoisomerases. Annu. Rev. Biochem, 65, 635-692.
    • (1996) Annu. Rev. Biochem , vol.65 , pp. 635-692
    • Wang, J.C.1
  • 4
    • 0032190561 scopus 로고    scopus 로고
    • Mechanism of action of eukaryotic topoisomerase II and drugs targeted to the enzyme
    • Burden,D.A. and Osheroff,N. (1998) Mechanism of action of eukaryotic topoisomerase II and drugs targeted to the enzyme. Biochim. Biophys. Acta, 1400, 139-154.
    • (1998) Biochim. Biophys. Acta , vol.1400 , pp. 139-154
    • Burden, D.A.1    Osheroff, N.2
  • 5
    • 0032189945 scopus 로고    scopus 로고
    • DNA sequence selectivity of topoisomerases and topoisomerase poisons
    • Capranico,G. and Binaschi,M. (1998) DNA sequence selectivity of topoisomerases and topoisomerase poisons. Biochim. Biophys. Acta, 1400, 185-194.
    • (1998) Biochim. Biophys. Acta , vol.1400 , pp. 185-194
    • Capranico, G.1    Binaschi, M.2
  • 6
    • 3142662140 scopus 로고    scopus 로고
    • Development of DNA topoisomerase-related therapeutics: A short perspective of new challenges
    • Capranico,G., Zagotto,G. and Palumbo,M. (2004) Development of DNA topoisomerase-related therapeutics: A short perspective of new challenges. Curr. Med. Chem. Anti-Canc. Agents, 4, 335-345.
    • (2004) Curr. Med. Chem. Anti-Canc. Agents , vol.4 , pp. 335-345
    • Capranico, G.1    Zagotto, G.2    Palumbo, M.3
  • 7
    • 0032168167 scopus 로고    scopus 로고
    • Etoposide: Four decades of development of a topoisomerase II inhibitor
    • Hande,K.R. (1998) Etoposide: Four decades of development of a topoisomerase II inhibitor. Eur. J. Cancer, 34, 1514-1521.
    • (1998) Eur. J. Cancer , vol.34 , pp. 1514-1521
    • Hande, K.R.1
  • 10
    • 0032189262 scopus 로고    scopus 로고
    • Cell death induced by topoisomerase-targeted drugs: More questions than answers
    • Kaufmann,S.H. (1998) Cell death induced by topoisomerase-targeted drugs: more questions than answers. Biochim. Biophys. Acta, 1400, 195-211.
    • (1998) Biochim. Biophys. Acta , vol.1400 , pp. 195-211
    • Kaufmann, S.H.1
  • 12
    • 0032189081 scopus 로고    scopus 로고
    • Secondary leukemias induced by topoisomerase-targeted drugs
    • Felix,C.A. (1998) Secondary leukemias induced by topoisomerase-targeted drugs. Biochim. Biophys. Acta, 1400, 233-255.
    • (1998) Biochim. Biophys. Acta , vol.1400 , pp. 233-255
    • Felix, C.A.1
  • 13
    • 0035859820 scopus 로고    scopus 로고
    • Near-precise interchromosomal recombination and functional DNA topoisomerase II cleavage sites at MLL and AF-4 genomic breakpoints in treatment-related acute lymphoblastic leukemia with t(4;11) translocation
    • Lovett,B.D., Lo Nigro,L., Rappaport,E.F., Blair,I.A., Osheroff,N., Zheng,N., Megonigal,M.D., Williams,W.R., Nowell,P.C. and Felix,C.A. (2001) Near-precise interchromosomal recombination and functional DNA topoisomerase II cleavage sites at MLL and AF-4 genomic breakpoints in treatment-related acute lymphoblastic leukemia with t(4;11) translocation. Proc. Natl Acad. Sci. USA, 98, 9802-9807.
    • (2001) Proc. Natl Acad. Sci. USA , vol.98 , pp. 9802-9807
    • Lovett, B.D.1    Lo Nigro, L.2    Rappaport, E.F.3    Blair, I.A.4    Osheroff, N.5    Zheng, N.6    Megonigal, M.D.7    Williams, W.R.8    Nowell, P.C.9    Felix, C.A.10
  • 15
    • 0346753588 scopus 로고    scopus 로고
    • Reciprocal DNA topoisomerase II cleavage events at 50′-TATTA-3′ sequences in MLL and AF-9 create homologous single-stranded overhangs that anneal to form der(11) and der(9) genomic breakpoint junctions in treatment-related AML without further processing
    • Whitmarsh,R.J., Saginario,C., Zhuo,Y., Hilgenfeld,E., Rappaport,E.F., Megonigal,M.D., Carroll,M., Liu,M., Osheroff,N., Cheung,N.K. et al. (2003) Reciprocal DNA topoisomerase II cleavage events at 50′-TATTA-3′ sequences in MLL and AF-9 create homologous single-stranded overhangs that anneal to form der(11) and der(9) genomic breakpoint junctions in treatment-related AML without further processing. Oncogene, 22, 8448-8459.
    • (2003) Oncogene , vol.22 , pp. 8448-8459
    • Whitmarsh, R.J.1    Saginario, C.2    Zhuo, Y.3    Hilgenfeld, E.4    Rappaport, E.F.5    Megonigal, M.D.6    Carroll, M.7    Liu, M.8    Osheroff, N.9    Cheung, N.K.10
  • 16
    • 0030878687 scopus 로고    scopus 로고
    • Sequence-specific targeting of duplex DNA using a camptothecin-triple helix forming oligonucleotide conjugate and topoisomerase I
    • Matteucci,M., Lin,K.-Y., Huang,T., Wagner,R., Sternbach,D.D., Mehrotra,M. and Besterman,J.M. (1997) Sequence-specific targeting of duplex DNA using a camptothecin-triple helix forming oligonucleotide conjugate and topoisomerase I. J. Am. Chem. Soc, 119, 6939-6940.
    • (1997) J. Am. Chem. Soc , vol.119 , pp. 6939-6940
    • Matteucci, M.1    Lin, K.-Y.2    Huang, T.3    Wagner, R.4    Sternbach, D.D.5    Mehrotra, M.6    Besterman, J.M.7
  • 17
    • 0033303826 scopus 로고    scopus 로고
    • Targeting topoisomerase I cleavage to specific sequences of DNA by triple helix-forming oligonucleotide conjugates. A comparison between a rebeccamycin derivative and camptothecin
    • Arimondo,P.B., Bailly,C., Boutorine,A., Sun,J.S., Garestier,T. and Hélène,C. (1999) Targeting topoisomerase I cleavage to specific sequences of DNA by triple helix-forming oligonucleotide conjugates. A comparison between a rebeccamycin derivative and camptothecin. C R Acad. Sci. III, 322, 785-790.
    • (1999) C R Acad. Sci. III , vol.322 , pp. 785-790
    • Arimondo, P.B.1    Bailly, C.2    Boutorine, A.3    Sun, J.S.4    Garestier, T.5    Hélène, C.6
  • 18
    • 0036479132 scopus 로고    scopus 로고
    • Design and optimization of camptothecin conjugates of triple helix-forming oligonucleotides for sequence-specific DNA cleavage by topoisomerase I
    • Arimondo,P.B., Boutorine,A., Baldeyrou,B., Bailly,C., Kuwahara,M., Hecht,S.M., Sun,J.S., Garestier,T. and Hélène,C. (2002) Design and optimization of camptothecin conjugates of triple helix-forming oligonucleotides for sequence-specific DNA cleavage by topoisomerase I. J. Biol. Chem, 277, 3132-3140.
    • (2002) J. Biol. Chem , vol.277 , pp. 3132-3140
    • Arimondo, P.B.1    Boutorine, A.2    Baldeyrou, B.3    Bailly, C.4    Kuwahara, M.5    Hecht, S.M.6    Sun, J.S.7    Garestier, T.8    Hélène, C.9
  • 19
    • 4444358344 scopus 로고    scopus 로고
    • Camptothecins and topoisomerase I: A foot in the door. Targeting the genome beyond topoisomerase I with camptothecins and novel anticancer drugs: Importance of DNA replication, repair and cell cycle checkpoints
    • Pommier,Y. (2004) Camptothecins and topoisomerase I: A foot in the door. Targeting the genome beyond topoisomerase I with camptothecins and novel anticancer drugs: Importance of DNA replication, repair and cell cycle checkpoints. Curr. Med. Chem. Anti-Canc. Agents, 4, 429-434.
    • (2004) Curr. Med. Chem. Anti-Canc. Agents , vol.4 , pp. 429-434
    • Pommier, Y.1
  • 20
    • 0033736149 scopus 로고    scopus 로고
    • Linkage of a triple helix-forming oligonucleotide to amsacrine-4-carboxamide derivatives modulates the sequence-selectivity of topoisomerase II-mediated DNA cleavage
    • Arimondo,P., Bailly,C., Boutorine,A., Asseline,U., Sun,J.S., Garestier,T. and Hélène,C. (2000) Linkage of a triple helix-forming oligonucleotide to amsacrine-4-carboxamide derivatives modulates the sequence-selectivity of topoisomerase II-mediated DNA cleavage. Nucleosides Nucleotides Nucleic Acids, 19, 1205-1218.
    • (2000) Nucleosides Nucleotides Nucleic Acids , vol.19 , pp. 1205-1218
    • Arimondo, P.1    Bailly, C.2    Boutorine, A.3    Asseline, U.4    Sun, J.S.5    Garestier, T.6    Hélène, C.7
  • 24
    • 0037470042 scopus 로고    scopus 로고
    • A two-drug model for etoposide action against human topoisomerase IIalpha
    • Bromberg,K.D., Burgin,A.B. and Osheroff,N. (2003) A two-drug model for etoposide action against human topoisomerase IIalpha. J. Biol. Chem, 278, 7406-7412.
    • (2003) J. Biol. Chem , vol.278 , pp. 7406-7412
    • Bromberg, K.D.1    Burgin, A.B.2    Osheroff, N.3
  • 25
    • 33751499160 scopus 로고
    • Synthesis of a tetrafluoro-substituted aryl azide and its protio analogue as photoaffinity labeling reagents for the estrogen receptor
    • Pinney,K.G. and Katzenellenbogen,J.A. (1991) Synthesis of a tetrafluoro-substituted aryl azide and its protio analogue as photoaffinity labeling reagents for the estrogen receptor. J. Org. Chem., 56, 3125-3133.
    • (1991) J. Org. Chem. , vol.56 , pp. 3125-3133
    • Pinney, K.G.1    Katzenellenbogen, J.A.2
  • 26
    • 0014725117 scopus 로고
    • Oligonucleotides interactions III. Circular dichroism studies of the conformation of deoxyoligonucleotides
    • Cantor,C.R., Warshaw,M.M. and Shapiro,H. (1970) Oligonucleotides interactions III. Circular dichroism studies of the conformation of deoxyoligonucleotides. Biopolymers, 9, 1059-1077.
    • (1970) Biopolymers , vol.9 , pp. 1059-1077
    • Cantor, C.R.1    Warshaw, M.M.2    Shapiro, H.3
  • 27
    • 0034502384 scopus 로고    scopus 로고
    • Rapid routes of synthesis of oligonucleotide conjugates from non-protected oligonucleotides and ligands possessing different nucleophilic or electrophilic functional groups
    • Grimm,G.N., Boutorine,A.S. and Hélène,C. (2000) Rapid routes of synthesis of oligonucleotide conjugates from non-protected oligonucleotides and ligands possessing different nucleophilic or electrophilic functional groups. Nucleosides Nucleotides Nucleic Acids, 19, 1943-1965.
    • (2000) Nucleosides Nucleotides Nucleic Acids , vol.19 , pp. 1943-1965
    • Grimm, G.N.1    Boutorine, A.S.2    Hélène, C.3
  • 28
    • 0034434229 scopus 로고    scopus 로고
    • Design of two etoposide-amsacrine conjugates: Topoisomerase II and tubuline polymerization inhibition and relation to cytotoxicity
    • Arimondo,P., Boukarim,C., Bailly,C., Dauzonne,D. and Monneret,C. (2000) Design of two etoposide-amsacrine conjugates: Topoisomerase II and tubuline polymerization inhibition and relation to cytotoxicity. Anticancer Drug Des, 15, 413-421.
    • (2000) Anticancer Drug Des , vol.15 , pp. 413-421
    • Arimondo, P.1    Boukarim, C.2    Bailly, C.3    Dauzonne, D.4    Monneret, C.5
  • 29
    • 0027418105 scopus 로고
    • Oligonucleotides derived from 5-(1-propynyl)-2′-O- allyl-uridine and 5-(1-propynyl)-2′-O-allyl-cytidine: Synthesis and RNA duplex formation
    • Froehler,B.C., Jones,R.J., Cao,X.D. and Terhorst,T.J. (1993) Oligonucleotides derived from 5-(1-propynyl)-2′-O- allyl-uridine and 5-(1-propynyl)-2′-O-allyl-cytidine: Synthesis and RNA duplex formation. Tetrahedron Lett., 34, 1003-1006.
    • (1993) Tetrahedron Lett. , vol.34 , pp. 1003-1006
    • Froehler, B.C.1    Jones, R.J.2    Cao, X.D.3    Terhorst, T.J.4
  • 30
    • 0032971841 scopus 로고    scopus 로고
    • Triplex formation by oligonucleotides containing 5-(1-propynyl) -2′- deoxyuridine: Decreased magnesium dependence and improved intracellular gene targeting
    • Lacroix,L., Lacoste,J., Reddoch,J.F., Mergny,J.L., Levy,D.D., Seidman,M.M., Matteucci,M.D. and Glazer,P.M. (1999) Triplex formation by oligonucleotides containing 5-(1-propynyl)-2′-deoxyuridine: Decreased magnesium dependence and improved intracellular gene targeting. Biochemistry, 38, 1893-1901.
    • (1999) Biochemistry , vol.38 , pp. 1893-1901
    • Lacroix, L.1    Lacoste, J.2    Reddoch, J.F.3    Mergny, J.L.4    Levy, D.D.5    Seidman, M.M.6    Matteucci, M.D.7    Glazer, P.M.8
  • 31
    • 0034066219 scopus 로고    scopus 로고
    • Recognition and cleavage of DNA by rebeccamycin- or benzopyridoquinoxaline conjugated of triple helix-forming oligonucleotides
    • Arimondo,P.B., Moreau,P., Boutorine,A., Bailly,C., Prudhomme,M., Sun,J.S., Garestier,T. and Hélène,C. (2000) Recognition and cleavage of DNA by rebeccamycin- or benzopyridoquinoxaline conjugated of triple helix-forming oligonucleotides. Bioorg. Med. Chem, 8, 777-784.
    • (2000) Bioorg. Med. Chem , vol.8 , pp. 777-784
    • Arimondo, P.B.1    Moreau, P.2    Boutorine, A.3    Bailly, C.4    Prudhomme, M.5    Sun, J.S.6    Garestier, T.7    Hélène, C.8
  • 32
    • 0024849694 scopus 로고
    • Nuclease protection by Drosophila DNA topoisomerase II. Enzyme/DNA contacts at the strong topoisomerase II cleavage sites
    • Lee,M.P., Sander,M. and Hsieh,T. (1989) Nuclease protection by Drosophila DNA topoisomerase II. Enzyme/DNA contacts at the strong topoisomerase II cleavage sites. J. Biol. Chem, 264, 21779-21787.
    • (1989) J. Biol. Chem , vol.264 , pp. 21779-21787
    • Lee, M.P.1    Sander, M.2    Hsieh, T.3
  • 33
    • 0025056628 scopus 로고
    • Eukaryotic topoisomerase II preferentially cleaves alternating purine-pyrimidine repeats
    • Spitzner,J.R., Chung,I.K. and Muller,M.T. (1990) Eukaryotic topoisomerase II preferentially cleaves alternating purine-pyrimidine repeats. Nucleic Acids Res, 18, 1-11.
    • (1990) Nucleic Acids Res , vol.18 , pp. 1-11
    • Spitzner, J.R.1    Chung, I.K.2    Muller, M.T.3
  • 34
    • 0025119181 scopus 로고
    • Characterization of the interaction between topoisomerase II and DNA by transcriptional footprinting
    • Thomsen,B., Bendixen,C., Lund,K., Andersen,A.H., Sorensen,B.S. and Westergaard,O. (1990) Characterization of the interaction between topoisomerase II and DNA by transcriptional footprinting. J. Mol. Biol, 215, 237-244.
    • (1990) J. Mol. Biol , vol.215 , pp. 237-244
    • Thomsen, B.1    Bendixen, C.2    Lund, K.3    Andersen, A.H.4    Sorensen, B.S.5    Westergaard, O.6
  • 35
  • 36
    • 0028007482 scopus 로고
    • Localization of an aminoacridine antitumor agent in a type II topoisomerase-DNA complex
    • Freudenreich,C.H. and Kreuzer,K.N. (1994) Localization of an aminoacridine antitumor agent in a type II topoisomerase-DNA complex. Proc. Natl Acad. Sci. USA, 91, 11007-11011.
    • (1994) Proc. Natl Acad. Sci. USA , vol.91 , pp. 11007-11011
    • Freudenreich, C.H.1    Kreuzer, K.N.2
  • 37
    • 0000385944 scopus 로고    scopus 로고
    • Design of new anti-cancer agents based on topoisomerase poisons targeted to specific DNA sequences
    • Arimondo,P.B. and Hélène,C. (2001) Design of new anti-cancer agents based on topoisomerase poisons targeted to specific DNA sequences. Curr. Med. Chem. Anti-Canc. Agents, 1, 219-235.
    • (2001) Curr. Med. Chem. Anti-Canc. Agents , vol.1 , pp. 219-235
    • Arimondo, P.B.1    Hélène, C.2
  • 39
    • 0034637574 scopus 로고    scopus 로고
    • Assignment of functional amino acids around the active site of human DNA topoisomerase IIalpha
    • Okada,Y., Ito,Y., Kikuchi,A., Nimura,Y., Yoshida,S. and Suzuki,M. (2000) Assignment of functional amino acids around the active site of human DNA topoisomerase IIalpha. J. Biol. Chem, 275, 24630-24638.
    • (2000) J. Biol. Chem , vol.275 , pp. 24630-24638
    • Okada, Y.1    Ito, Y.2    Kikuchi, A.3    Nimura, Y.4    Yoshida, S.5    Suzuki, M.6
  • 40
    • 0033214044 scopus 로고    scopus 로고
    • Molecular analysis of yeast and human type II topoisomerases. Enzyme-DNA and drug interactions
    • Strumberg,D., Nitiss,J.L., Dong,J., Kohn,K.W. and Pommier,Y. (1999) Molecular analysis of yeast and human type II topoisomerases. Enzyme-DNA and drug interactions. J. Biol. Chem, 274, 28246-28255.
    • (1999) J. Biol. Chem , vol.274 , pp. 28246-28255
    • Strumberg, D.1    Nitiss, J.L.2    Dong, J.3    Kohn, K.W.4    Pommier, Y.5
  • 41
    • 0035852792 scopus 로고    scopus 로고
    • Analysis of etoposide binding to subdomains of human DNA topoisomerase II alpha in the absence of DNA
    • Leroy,D., Kajava,A.V., Frei,C. and Gasser,S.M. (2001) Analysis of etoposide binding to subdomains of human DNA topoisomerase II alpha in the absence of DNA. Biochemistry, 40, 1624-1634.
    • (2001) Biochemistry , vol.40 , pp. 1624-1634
    • Leroy, D.1    Kajava, A.V.2    Frei, C.3    Gasser, S.M.4
  • 42
    • 9644295787 scopus 로고    scopus 로고
    • A mutation in Escherichia coli DNA gyrase conferring quinolone resistance results in sensitivity to drugs targeting eukaryotic topoisomerase II
    • Gruger,T., Nitiss,J.L., Maxwell,A., Zechiedrich,E.L., Heisig,P., Seeber,S., Pommier,Y. and Strumberg,D. (2004) A mutation in Escherichia coli DNA gyrase conferring quinolone resistance results in sensitivity to drugs targeting eukaryotic topoisomerase II. Antimicrob. Agents Chemother., 48, 4495-4504.
    • (2004) Antimicrob. Agents Chemother. , vol.48 , pp. 4495-4504
    • Gruger, T.1    Nitiss, J.L.2    Maxwell, A.3    Zechiedrich, E.L.4    Heisig, P.5    Seeber, S.6    Pommier, Y.7    Strumberg, D.8
  • 43
    • 11144257689 scopus 로고    scopus 로고
    • Random mutagenesis of the B′A′ core domain of yeast DNA topoisomerase II and large-scale screens of mutants resistant to the anticancer drug etoposide
    • Jiang,X. (2005) Random mutagenesis of the B′A′ core domain of yeast DNA topoisomerase II and large-scale screens of mutants resistant to the anticancer drug etoposide. Biochem. Biophys. Res. Commun, 327, 597-603.
    • (2005) Biochem. Biophys. Res. Commun , vol.327 , pp. 597-603
    • Jiang, X.1
  • 44
    • 0141940254 scopus 로고    scopus 로고
    • Modulation of drug sensitivity in yeast cells by the ATP-binding domain of human DNA topoisomerase IIalpha
    • Vilain,N., Tsai-Pflugfelder,M., Benoit,A., Gasser,S.M. and Leroy,D. (2003) Modulation of drug sensitivity in yeast cells by the ATP-binding domain of human DNA topoisomerase IIalpha. Nucleic Acids Res, 31, 5714-5722.
    • (2003) Nucleic Acids Res , vol.31 , pp. 5714-5722
    • Vilain, N.1    Tsai-Pflugfelder, M.2    Benoit, A.3    Gasser, S.M.4    Leroy, D.5
  • 45
    • 0141591551 scopus 로고    scopus 로고
    • Structure of the topoisomerase II ATPase region and its mechanism of inhibition by the chemotherapeutic agent ICRF-187
    • Classen,S., Olland,S. and Berger,J.M. (2003) Structure of the topoisomerase II ATPase region and its mechanism of inhibition by the chemotherapeutic agent ICRF-187. Proc. Natl Acad. Sci. USA, 100, 10629-10634.
    • (2003) Proc. Natl Acad. Sci. USA , vol.100 , pp. 10629-10634
    • Classen, S.1    Olland, S.2    Berger, J.M.3
  • 46
    • 0029909081 scopus 로고    scopus 로고
    • The combination of different types of antitumor topoisomerase II inhibitors, ICRF-193 and VP-16, has synergistic and antagonistic effects on cell survival, depending on treatment schedule
    • Ishida,R., Iwai,M., Hara,A. and Andoh,T. (1996) The combination of different types of antitumor topoisomerase II inhibitors, ICRF-193 and VP-16, has synergistic and antagonistic effects on cell survival, depending on treatment schedule. Anticancer Res., 16, 2735-2740.
    • (1996) Anticancer Res. , vol.16 , pp. 2735-2740
    • Ishida, R.1    Iwai, M.2    Hara, A.3    Andoh, T.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.