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Volumn 239, Issue 3, 2006, Pages 298-312

Modelling the compartmentalization of splicing factors

Author keywords

Aggregation; Nuclear speckles; Pattern formation; Splicing factors

Indexed keywords

NUCLEAR PROTEIN; SPLICING FACTOR; UNCLASSIFIED DRUG;

EID: 33644892252     PISSN: 00225193     EISSN: 10958541     Source Type: Journal    
DOI: 10.1016/j.jtbi.2005.07.019     Document Type: Article
Times cited : (14)

References (50)
  • 1
    • 0038401969 scopus 로고    scopus 로고
    • Role of modular domains of SR proteins in subnuclear localization and alternative splicing specificity
    • J. Cáceres, T. Misteli, G. Screaton, D. Spector, and A.R. Krainer Role of modular domains of SR proteins in subnuclear localization and alternative splicing specificity J. Cell Biol. 138 2 1997 225 238
    • (1997) J. Cell Biol. , vol.138 , Issue.2 , pp. 225-238
    • Cáceres, J.1    Misteli, T.2    Screaton, G.3    Spector, D.4    Krainer, A.R.5
  • 2
    • 0020162216 scopus 로고
    • The nuclear matrix: Three-dimensional architecture and protein composition
    • D. Capco, K. Wan, and S. Penman The nuclear matrix: three-dimensional architecture and protein composition Cell 29 3 1982 847 858
    • (1982) Cell , vol.29 , Issue.3 , pp. 847-858
    • Capco, D.1    Wan, K.2    Penman, S.3
  • 3
    • 7444240826 scopus 로고    scopus 로고
    • Characterizing fluorescence recovery curves for nuclear proteins undergoing binding events
    • G. Carrero, E. Crawford, M. Hendzel, and G. de Vries Characterizing fluorescence recovery curves for nuclear proteins undergoing binding events Bull. Math. Biol. 66 6 2004 1515 1545
    • (2004) Bull. Math. Biol. , vol.66 , Issue.6 , pp. 1515-1545
    • Carrero, G.1    Crawford, E.2    Hendzel, M.3    De Vries, G.4
  • 6
    • 0032526770 scopus 로고    scopus 로고
    • The Clk2 and Clk3 dual-specificity protein kinases regulate the intracellular distribution of SR proteins and influence pre-mRNA splicing
    • P. Duncan, D. Stojdl, R. Marius, and J. Bell The Clk2 and Clk3 dual-specificity protein kinases regulate the intracellular distribution of SR proteins and influence pre-mRNA splicing Exp. Cell Res. 241 1998 300 308
    • (1998) Exp. Cell Res. , vol.241 , pp. 300-308
    • Duncan, P.1    Stojdl, D.2    Marius, R.3    Bell, J.4
  • 7
    • 0035365808 scopus 로고    scopus 로고
    • Functional architecture in the cell nucleus
    • M. Dundr, and T. Misteli Functional architecture in the cell nucleus Biochem. J. 356 2001 297 310
    • (2001) Biochem. J. , vol.356 , pp. 297-310
    • Dundr, M.1    Misteli, T.2
  • 8
    • 0029372979 scopus 로고
    • The superfamily of arginine/serine-rich splicing factors
    • X.D. Fu The superfamily of arginine/serine-rich splicing factors RNA 1 1995 663 680
    • (1995) RNA , vol.1 , pp. 663-680
    • Fu, X.D.1
  • 9
    • 0028286596 scopus 로고
    • A serine kinase regulates intracellular localization of splicing factors in the cell cycle
    • J. Gui, W. Lane, and X.-D. Fu A serine kinase regulates intracellular localization of splicing factors in the cell cycle Nature 369 1994 678 682
    • (1994) Nature , vol.369 , pp. 678-682
    • Gui, J.1    Lane, W.2    Fu, X.-D.3
  • 11
    • 0025270026 scopus 로고
    • Core filaments of the nuclear matrix
    • D. He, J. Nickerson, and S. Penman Core filaments of the nuclear matrix J. Cell Biol. 110 1990 569 580
    • (1990) J. Cell Biol. , vol.110 , pp. 569-580
    • He, D.1    Nickerson, J.2    Penman, S.3
  • 12
    • 0031713881 scopus 로고    scopus 로고
    • Organization of highly acetylated chromatin around sites of heterogeneous nuclear RNA accumulation
    • M. Hendzel, M. Kruhlak, and D. Bazett-Jones Organization of highly acetylated chromatin around sites of heterogeneous nuclear RNA accumulation Mol. Biol. Cell 9 1998 2491 2507
    • (1998) Mol. Biol. Cell , vol.9 , pp. 2491-2507
    • Hendzel, M.1    Kruhlak, M.2    Bazett-Jones, D.3
  • 13
    • 0032979579 scopus 로고    scopus 로고
    • Direct visualization of a protein nuclear architecture
    • M. Hendzel, F.-M. Boisvert, and D. Bazett-Jones Direct visualization of a protein nuclear architecture Mol. Biol. Cell 10 1999 2051 2062
    • (1999) Mol. Biol. Cell , vol.10 , pp. 2051-2062
    • Hendzel, M.1    Boisvert, F.-M.2    Bazett-Jones, D.3
  • 15
    • 0029952583 scopus 로고    scopus 로고
    • Intron-dependent recruitment of pre-mRNA splicing factors to sites of transcription
    • S. Huang, and D. Spector Intron-dependent recruitment of pre-mRNA splicing factors to sites of transcription J. Cell Biol. 131 1996 719 732
    • (1996) J. Cell Biol. , vol.131 , pp. 719-732
    • Huang, S.1    Spector, D.2
  • 16
    • 0034631851 scopus 로고    scopus 로고
    • Reduced mobility of the Alternate Splicing Factor (ASF) through the nucleoplasm and steady-state speckle compartments
    • M. Kruhlak, M. Lever, W. Fischle, E. Verdin, D. Bazzett-Jones, and M. Hendzel Reduced mobility of the Alternate Splicing Factor (ASF) through the nucleoplasm and steady-state speckle compartments J. Cell Biol. 150 2000 41 52
    • (2000) J. Cell Biol. , vol.150 , pp. 41-52
    • Kruhlak, M.1    Lever, M.2    Fischle, W.3    Verdin, E.4    Bazzett-Jones, D.5    Hendzel, M.6
  • 17
    • 0037049554 scopus 로고    scopus 로고
    • Lamin A/C speckles mediate spatial organization of splicing factor compartments and RNA polymerase II transcription
    • R. Kumaran, B. Muralikrishna, and V. Paranaik Lamin A/C speckles mediate spatial organization of splicing factor compartments and RNA polymerase II transcription J. Cell Biol. 159 2002 783 793
    • (2002) J. Cell Biol. , vol.159 , pp. 783-793
    • Kumaran, R.1    Muralikrishna, B.2    Paranaik, V.3
  • 18
    • 0032562608 scopus 로고    scopus 로고
    • Structure and function in the nucleus
    • A. Lamond, and W. Earnschaw Structure and function in the nucleus Science 280 1998 547 553
    • (1998) Science , vol.280 , pp. 547-553
    • Lamond, A.1    Earnschaw, W.2
  • 19
    • 0041669439 scopus 로고    scopus 로고
    • Nuclear speckles: A model for nuclear organelles
    • A. Lamond, and D. Spector Nuclear speckles: a model for nuclear organelles Nat. Rev. Mol. Cell Biol. 4 2003 605 612
    • (2003) Nat. Rev. Mol. Cell Biol. , vol.4 , pp. 605-612
    • Lamond, A.1    Spector, D.2
  • 20
    • 0033782017 scopus 로고    scopus 로고
    • The nucleoskeleton: Go EAST, young man
    • L. Lasky The nucleoskeleton: go EAST, young man Nat. Cell Biol. 2 2000 E74 E76
    • (2000) Nat. Cell Biol. , vol.2
    • Lasky, L.1
  • 21
    • 0028003350 scopus 로고
    • Spatial coupling of plant and hervivore dynamics: The contribution of hervivore dispersal to transient and persistent "waves" of damage
    • M. Lewis Spatial coupling of plant and hervivore dynamics: the contribution of hervivore dispersal to transient and persistent "Waves" of damage Theor. Popul. Biol. 45 1994 277 312
    • (1994) Theor. Popul. Biol. , vol.45 , pp. 277-312
    • Lewis, M.1
  • 22
    • 0034717122 scopus 로고    scopus 로고
    • Like attracts like: Getting RNA processing together in the nucleus
    • J. Lewis, and D. Tollervey Like attracts like: getting RNA processing together in the nucleus Science 288 2000 1385 1389
    • (2000) Science , vol.288 , pp. 1385-1389
    • Lewis, J.1    Tollervey, D.2
  • 23
    • 0029767662 scopus 로고    scopus 로고
    • SR proteins and splicing control
    • J. Manley, and R. Tacke SR proteins and splicing control Genes Dev. 10 1996 1569 1579
    • (1996) Genes Dev. , vol.10 , pp. 1569-1579
    • Manley, J.1    Tacke, R.2
  • 24
    • 0033179146 scopus 로고    scopus 로고
    • Nuclear bodies: Multifaceted subdomains of the interchromatin space
    • A. Matera Nuclear bodies: multifaceted subdomains of the interchromatin space Trends Cell Biol. 9 1999 302 309
    • (1999) Trends Cell Biol. , vol.9 , pp. 302-309
    • Matera, A.1
  • 25
    • 0034083175 scopus 로고    scopus 로고
    • Cell biology of transcription and pre-mRNA splicing: Nuclear architecture meets nuclear function
    • T. Misteli Cell biology of transcription and pre-mRNA splicing: nuclear architecture meets nuclear function J. Cell Sci. 113 2000 1841 1849
    • (2000) J. Cell Sci. , vol.113 , pp. 1841-1849
    • Misteli, T.1
  • 26
    • 0035889085 scopus 로고    scopus 로고
    • The concept of self-organization in cellular architecture
    • T. Misteli The concept of self-organization in cellular architecture J. Cell Biol. 155 2 2001 181 185
    • (2001) J. Cell Biol. , vol.155 , Issue.2 , pp. 181-185
    • Misteli, T.1
  • 27
    • 0035793376 scopus 로고    scopus 로고
    • Protein dynamics: Implications for nuclear architecture and gene expression
    • T. Misteli Protein dynamics: implications for nuclear architecture and gene expression Science 291 2001 843 847
    • (2001) Science , vol.291 , pp. 843-847
    • Misteli, T.1
  • 28
    • 0029798802 scopus 로고    scopus 로고
    • Serine/threonine phosphatase 1 modulates the subnuclear distribution of pre-mRNA splicing factors
    • T. Misteli, and D. Spector Serine/threonine phosphatase 1 modulates the subnuclear distribution of pre-mRNA splicing factors Mol. Biol. Cell 7 1996 1559 1572
    • (1996) Mol. Biol. Cell , vol.7 , pp. 1559-1572
    • Misteli, T.1    Spector, D.2
  • 29
    • 0031128181 scopus 로고    scopus 로고
    • Protein phosphorylation and the nuclear organization of pre-mRNA splicing
    • T. Misteli, and D. Spector Protein phosphorylation and the nuclear organization of pre-mRNA splicing Trends Cell Biol. 7 1997 135 138
    • (1997) Trends Cell Biol. , vol.7 , pp. 135-138
    • Misteli, T.1    Spector, D.2
  • 30
    • 0031834613 scopus 로고    scopus 로고
    • The cellular organization of gene expression
    • T. Misteli, and D. Spector The cellular organization of gene expression Curr. Opin. Cell Biol. 10 1998 322 331
    • (1998) Curr. Opin. Cell Biol. , vol.10 , pp. 322-331
    • Misteli, T.1    Spector, D.2
  • 31
    • 1842376906 scopus 로고    scopus 로고
    • The dynamics of a pre-mRNA splicing factor in living cells
    • T. Misteli, J. Cáceres, and D. Spector The dynamics of a pre-mRNA splicing factor in living cells Nature 387 1997 523 527
    • (1997) Nature , vol.387 , pp. 523-527
    • Misteli, T.1    Cáceres, J.2    Spector, D.3
  • 32
    • 0001262652 scopus 로고
    • Selecting a common direction, I: How orientational order can arise from simple contact responses between interacting cells
    • A. Mogilner, and L. Edelstein-Keshet Selecting a common direction, I: how orientational order can arise from simple contact responses between interacting cells J. Math. Biol. 33 1995 619 660
    • (1995) J. Math. Biol. , vol.33 , pp. 619-660
    • Mogilner, A.1    Edelstein-Keshet, L.2
  • 33
    • 0001499542 scopus 로고    scopus 로고
    • Spatio-angular order in populations of self-aligning objects: Formation of oriented patches
    • A. Mogilner, and L. Edelstein-Keshet Spatio-angular order in populations of self-aligning objects: formation of oriented patches Physica D 89 1996 346 367
    • (1996) Physica D , vol.89 , pp. 346-367
    • Mogilner, A.1    Edelstein-Keshet, L.2
  • 35
    • 0029681920 scopus 로고    scopus 로고
    • Selecting a common direction, II: Peak-like solutions representing total alignment of cell clusters
    • A. Mogilner, L. Edelstein-Keshet, and G. Ermentrout Selecting a common direction, II: peak-like solutions representing total alignment of cell clusters J. Math. Biol. 34 1996 811 842
    • (1996) J. Math. Biol. , vol.34 , pp. 811-842
    • Mogilner, A.1    Edelstein-Keshet, L.2    Ermentrout, G.3
  • 37
    • 4744370566 scopus 로고    scopus 로고
    • Visualization of a highly organized intranuclear network of filaments in living cells
    • G. Nalepa, and J. Harper Visualization of a highly organized intranuclear network of filaments in living cells Cell Motil. Cytoskeleton 59 2004 94 108
    • (2004) Cell Motil. Cytoskeleton , vol.59 , pp. 94-108
    • Nalepa, G.1    Harper, J.2
  • 38
    • 0035110880 scopus 로고    scopus 로고
    • Experimental observations of a nuclear matrix
    • J. Nickerson Experimental observations of a nuclear matrix J. Cell Sci. 114 2001 463 474
    • (2001) J. Cell Sci. , vol.114 , pp. 463-474
    • Nickerson, J.1
  • 39
    • 0033779678 scopus 로고    scopus 로고
    • Diffusional protein transport within the nucleus: A message in the medium
    • T. Pederson Diffusional protein transport within the nucleus: a message in the medium Nature 2 2000 E73 E74
    • (2000) Nature , vol.2
    • Pederson, T.1
  • 40
    • 0034100040 scopus 로고    scopus 로고
    • Half a century of "the Nuclear Matrix"
    • T. Pederson Half a century of "The Nuclear Matrix" Mol. Biol. Cell 11 2000 799 805
    • (2000) Mol. Biol. Cell , vol.11 , pp. 799-805
    • Pederson, T.1
  • 41
    • 0034611785 scopus 로고    scopus 로고
    • High mobility of proteins in the cell nucleus
    • R. Phair, and T. Misteli High mobility of proteins in the cell nucleus Nature 404 2000 604 609
    • (2000) Nature , vol.404 , pp. 604-609
    • Phair, R.1    Misteli, T.2
  • 42
    • 0027135889 scopus 로고
    • Macromolecular domains within the cell nucleus
    • D. Spector Macromolecular domains within the cell nucleus Annu. Rev. Cell Biol. 9 1993 265 315
    • (1993) Annu. Rev. Cell Biol. , vol.9 , pp. 265-315
    • Spector, D.1
  • 43
    • 0034851781 scopus 로고    scopus 로고
    • Nuclear domains
    • D. Spector Nuclear domains J. Cell Sci. 114 2001 2891 2893
    • (2001) J. Cell Sci. , vol.114 , pp. 2891-2893
    • Spector, D.1
  • 44
    • 0024567969 scopus 로고
    • Population consequences of aggregative movement
    • P. Turchin Population consequences of aggregative movement J. Anim. Ecol. 58 1989 75 100
    • (1989) J. Anim. Ecol. , vol.58 , pp. 75-100
    • Turchin, P.1
  • 46
    • 0032559642 scopus 로고    scopus 로고
    • SRPK2: A differentially expressed SR protein-specific kinase involved in mediating the interaction and localization of pre-mRNA splicing in mammalian cells
    • H.-Y. Wang, W. Lin, J. Dyck, J. Yeakley, Z. Songyang, L.C. Cantley, and X.D. Fu SRPK2: a differentially expressed SR protein-specific kinase involved in mediating the interaction and localization of pre-mRNA splicing in mammalian cells J. Cell Biol. 140 1998 737 750
    • (1998) J. Cell Biol. , vol.140 , pp. 737-750
    • Wang, H.-Y.1    Lin, W.2    Dyck, J.3    Yeakley, J.4    Songyang, Z.5    Cantley, L.C.6    Fu, X.D.7
  • 47
    • 0033625535 scopus 로고    scopus 로고
    • The EAST protein of Drosophila controls an expandable nuclear endoskeleton
    • M. Wasser, and W. Chia The EAST protein of Drosophila controls an expandable nuclear endoskeleton Nat. Cell Biol. 2 2000 268 275
    • (2000) Nat. Cell Biol. , vol.2 , pp. 268-275
    • Wasser, M.1    Chia, W.2
  • 48
    • 0031042396 scopus 로고    scopus 로고
    • Phosphorylation of the ASF/SF2 RS domain affects both protein-protein and protein-RNA interactions and is necessary for splicing
    • S. Xiao, and J. Manley Phosphorylation of the ASF/SF2 RS domain affects both protein-protein and protein-RNA interactions and is necessary for splicing Genes Dev. 11 1997 334 344
    • (1997) Genes Dev. , vol.11 , pp. 334-344
    • Xiao, S.1    Manley, J.2
  • 49
    • 0032476604 scopus 로고    scopus 로고
    • Phosphorylation-dephosphorylation differentially affects activities of splicing factor ASF/SF2
    • S. Xiao, and J. Manley Phosphorylation-dephosphorylation differentially affects activities of splicing factor ASF/SF2 EMBO (Eur. Mol. Biol. Organ.) J. 17 21 1998 6359 6367
    • (1998) EMBO (Eur. Mol. Biol. Organ.) J. , vol.17 , Issue.21 , pp. 6359-6367
    • Xiao, S.1    Manley, J.2


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