-
1
-
-
1542495429
-
Complex structures of Thermoactinomyces vulgaris R-47 α-amylase 1 with malto-oligosaccharides demonstrate the role of domain N acting as a starch-binding domain
-
ABE, A., TONOZUKA, T., SAKANO, Y. & KAMITORI, S. 2004. Complex structures of Thermoactinomyces vulgaris R-47 α-amylase 1 with malto-oligosaccharides demonstrate the role of domain N acting as a starch-binding domain. J. Mol. Biol. 335: 811-822.
-
(2004)
J. Mol. Biol.
, vol.335
, pp. 811-822
-
-
Abe, A.1
Tonozuka, T.2
Sakano, Y.3
Kamitori, S.4
-
2
-
-
0025183708
-
Basic local alignment search tool
-
ALTSCHUL, S.F., GISH, W., MILLER, W., MYERS, E.W. & LIPMAN, D.J. 1990. Basic local alignment search tool. J. Mol. Biol. 215: 403-410.
-
(1990)
J. Mol. Biol.
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
3
-
-
0035816504
-
A kinetic study of almond-β-glucosidase catalysed synthesis of hexyl-glycosides in low aqueous media. Influence of glycosyl donor and water activity
-
ANDERSSON, M. & ADLERCREUTZ, P. 2001. A kinetic study of almond-β-glucosidase catalysed synthesis of hexyl-glycosides in low aqueous media. Influence of glycosyl donor and water activity. J. Mol. Catal. B: Enzym. 14: 69-76.
-
(2001)
J. Mol. Catal. B: Enzym.
, vol.14
, pp. 69-76
-
-
Andersson, M.1
Adlercreutz, P.2
-
4
-
-
0026581629
-
Effect of water activity on enzymatic synthesis of alkylglycosides
-
CHAHID, Z., MONTET, D., PINA, M. & GRAILLE, J. 1992. Effect of water activity on enzymatic synthesis of alkylglycosides. Biotechnol. Lett. 14: 281-284.
-
(1992)
Biotechnol. Lett.
, vol.14
, pp. 281-284
-
-
Chahid, Z.1
Montet, D.2
Pina, M.3
Graille, J.4
-
5
-
-
0001973467
-
Carbohydrate-active enzymes: An integrated database approach
-
Gilbert, H.J., Davies, G.J., Henrissat, B. & Svensson, B. (eds), The Royal Society of Chemistry, Cambridge
-
COUTINHO, P.M. & HENRISSAT, B. 1999. Carbohydrate-active enzymes: an integrated database approach, pp. 3-12. In: GILBERT, H.J., DAVIES, G.J., HENRISSAT, B. & SVENSSON, B. (eds) Recent Advances in Carbohydrate Bioengineering, The Royal Society of Chemistry, Cambridge.
-
(1999)
Recent Advances in Carbohydrate Bioengineering
, pp. 3-12
-
-
Coutinho, P.M.1
Henrissat, B.2
-
6
-
-
0033614827
-
X-ray structure of Novamyl, the five-domain "maltogenic" α-amylase from Bacillus stearothermophilus: Maltose and acarbose complexes at 1.7 Å resolution
-
DAUTER, Z., DAUTER, M., BRZOZOWSKI, A.M., CHRISTENSEN, S., BORCHERT, T.V., BEIER, L., WILSON, K.S. & DAVIES, G.J. 1999. X-ray structure of Novamyl, the five-domain "maltogenic" α-amylase from Bacillus stearothermophilus: maltose and acarbose complexes at 1.7 Å resolution. Biochemistry 38: 8385-8392.
-
(1999)
Biochemistry
, vol.38
, pp. 8385-8392
-
-
Dauter, Z.1
Dauter, M.2
Brzozowski, A.M.3
Christensen, S.4
Borchert, T.V.5
Beier, L.6
Wilson, K.S.7
Davies, G.J.8
-
7
-
-
33751315156
-
Temperature limited fed-batch cultivations with a probing feeding strategy for Escherichia coli, ref no. 01
-
Nancy
-
th International Symposium on Computer Applications in Biotechnology, Nancy.
-
(2004)
th International Symposium on Computer Applications in Biotechnology
-
-
De Maré, L.1
Velut, S.2
Briechle, S.3
Wennerberg, C.4
Cimander, C.5
Ramchuran, S.6
Turnert, P.7
Silfversparre, O.8
Holst, O.9
Hagander, P.10
-
8
-
-
0029919677
-
Genetics of a novel starch utilisation pathway present in Klebsiella oxytoca
-
FIEDLER, G., PAJATSCH, M. & BÖCK, A. 1996. Genetics of a novel starch utilisation pathway present in Klebsiella oxytoca. J. Mol. Biol. 256: 279-291.
-
(1996)
J. Mol. Biol.
, vol.256
, pp. 279-291
-
-
Fiedler, G.1
Pajatsch, M.2
Böck, A.3
-
9
-
-
0032571552
-
A scheme for designating enzymes that hydrolyse the polysaccharides in the cell walls of plants
-
HENRISSAT, B., TEERI, T.T. & WARREN, R.A.J. 1998. A scheme for designating enzymes that hydrolyse the polysaccharides in the cell walls of plants. FEBS Lett. 425: 352-354.
-
(1998)
FEBS Lett.
, vol.425
, pp. 352-354
-
-
Henrissat, B.1
Teeri, T.T.2
Warren, R.A.J.3
-
10
-
-
0037712682
-
Three-dimensional structure of Bacillus stearothermophilus neopullulanase
-
HONDOH, H., KURIKI, T. & MATSUURA, Y. 2002. Three-dimensional structure of Bacillus stearothermophilus neopullulanase. Biologia, Bratislava 57 (Suppl. 11): 77-82.
-
(2002)
Biologia, Bratislava
, vol.57
, Issue.SUPPL. 11
, pp. 77-82
-
-
Hondoh, H.1
Kuriki, T.2
Matsuura, Y.3
-
11
-
-
0037423706
-
Three-dimensional structure and substrate binding of Bacillus stearothermophilus neopullulanase
-
HONDOH, H., KURIKI, T. & MATSUURA, Y. 2003. Three-dimensional structure and substrate binding of Bacillus stearothermophilus neopullulanase. J. Mol. Biol. 326: 177-188.
-
(2003)
J. Mol. Biol.
, vol.326
, pp. 177-188
-
-
Hondoh, H.1
Kuriki, T.2
Matsuura, Y.3
-
12
-
-
0036304348
-
Crystal structure and structural comparison of Thermoactinomyces vulgaris R-47 α-amylase 1 (TVAI) at 1.6 Å resolution and α-amylase 2 (TVAII) at 2.3 Å resolution
-
KAMITORI, S., ABE, A., OHTAKI, A., KAJI, A., TONOZUKA, T. & SAKANO, Y. 2002. Crystal structure and structural comparison of Thermoactinomyces vulgaris R-47 α-amylase 1 (TVAI) at 1.6 Å resolution and α-amylase 2 (TVAII) at 2.3 Å resolution. J. Mol. Biol. 318: 443-453.
-
(2002)
J. Mol. Biol.
, vol.318
, pp. 443-453
-
-
Kamitori, S.1
Abe, A.2
Ohtaki, A.3
Kaji, A.4
Tonozuka, T.5
Sakano, Y.6
-
13
-
-
0033574502
-
Crystal structure of Thermoactinomyces vulgaris R-47 α-amylase II (TVAII) hydrolyzing cyclodextrins and pullulan at 2.6 Å resolution
-
KAMITORI, S., KONDO, S., OKUYAMA, K., YOKOTA, T., SHIMURA, Y., TONOZUKA, T. & SAKANO, Y. 1999. Crystal structure of Thermoactinomyces vulgaris R-47 α-amylase II (TVAII) hydrolyzing cyclodextrins and pullulan at 2.6 Å resolution. J. Mol. Biol. 287: 907-921.
-
(1999)
J. Mol. Biol.
, vol.287
, pp. 907-921
-
-
Kamitori, S.1
Kondo, S.2
Okuyama, K.3
Yokota, T.4
Shimura, Y.5
Tonozuka, T.6
Sakano, Y.7
-
14
-
-
0033543556
-
Crystal structure of a maltogenic amylase provides insights into a catalytic versatility
-
KIM, J.S., CHA, S.S., KIM, H.J., KIM, T.J., HA, N.C., OH, S.T., CHO, U.S., CHO, M.J., KIM, M.J., LEE, H.S., KIM, J.H., CHOI, K.Y., PARK, K.H. & OH, B-H. 1999. Crystal structure of a maltogenic amylase provides insights into a catalytic versatility. J. Biol. Chem. 274: 26279-26286.
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 26279-26286
-
-
Kim, J.S.1
Cha, S.S.2
Kim, H.J.3
Kim, T.J.4
Ha, N.C.5
Oh, S.T.6
Cho, U.S.7
Cho, M.J.8
Kim, M.J.9
Lee, H.S.10
Kim, J.H.11
Choi, K.Y.12
Park, K.H.13
Oh, B.-H.14
-
15
-
-
0035960637
-
Modulation of the multisubstrate specificity of Thermus maltogenic amylase by truncation of the monomer/dimer equilibrium
-
KIM, T.J., NGUYEN, V.D., LEE, H.S., KIM, M.J., CHO, H.Y., KIM, Y.W., MOON, T.W., PARK, C.S., KIM, J.W., OH, B.H., LEE, S.B., SVENSSON, B. & PARK, K.H. 2001. Modulation of the multisubstrate specificity of Thermus maltogenic amylase by truncation of the monomer/dimer equilibrium. Biochemistry 40: 14182-14190.
-
(2001)
Biochemistry
, vol.40
, pp. 14182-14190
-
-
Kim, T.J.1
Nguyen, V.D.2
Lee, H.S.3
Kim, M.J.4
Cho, H.Y.5
Kim, Y.W.6
Moon, T.W.7
Park, C.S.8
Kim, J.W.9
Oh, B.H.10
Lee, S.B.11
Svensson, B.12
Park, K.H.13
-
16
-
-
0032976301
-
The concept of the α-amylase family: Structural similarity and common catalytic mechanism
-
KURIKI, T. & IMANAKA, T. 1999. The concept of the α-amylase family: structural similarity and common catalytic mechanism. J. Biosci. Bioeng. 87: 557-565.
-
(1999)
J. Biosci. Bioeng.
, vol.87
, pp. 557-565
-
-
Kuriki, T.1
Imanaka, T.2
-
17
-
-
0014949207
-
Cleavage of structural proteins during assembly of the head of bacteriophage T4
-
LAEMMLI, U. 1970. Cleavage of structural proteins during assembly of the head of bacteriophage T4. Nature 227: 680-685.
-
(1970)
Nature
, vol.227
, pp. 680-685
-
-
Laemmli, U.1
-
18
-
-
0029544938
-
A microdialysis probe offering arbitrary membrane length and an in situ tunable relative recovery
-
LAURELL, T. & BUTTLER, T. 1995. A microdialysis probe offering arbitrary membrane length and an in situ tunable relative recovery. Anal. Method Instrum. 2: 197-201.
-
(1995)
Anal. Method Instrum.
, vol.2
, pp. 197-201
-
-
Laurell, T.1
Buttler, T.2
-
19
-
-
33751330163
-
Quaternary structure and enzymatic properties of cyclomaltodextrinase from alkalophilic Bacillus sp. 1-5
-
LEE, H.S., KIM, J.S., SHIM, K.H., KIM, J.W., PARK, C.S. & PARK, K.H. 2005. Quaternary structure and enzymatic properties of cyclomaltodextrinase from alkalophilic Bacillus sp. 1-5. Biologia, Bratislava 60 (Suppl.16): 73-77.
-
(2005)
Biologia, Bratislava
, vol.60
, Issue.SUPPL. 61
, pp. 73-77
-
-
Lee, H.S.1
Kim, J.S.2
Shim, K.H.3
Kim, J.W.4
Park, C.S.5
Park, K.H.6
-
20
-
-
0035831255
-
Relationships of sequence and structure to specificity in the α-amylase family of enzymes
-
MACGREGOR, E.A., JANECEK, S. & SVENSSON, B. 2001. Relationships of sequence and structure to specificity in the α-amylase family of enzymes. Biochim. Biophys. Acta 1546: 1-20.
-
(2001)
Biochim. Biophys. Acta
, vol.1546
, pp. 1-20
-
-
MacGregor, E.A.1
Janecek, S.2
Svensson, B.3
-
21
-
-
33747333106
-
Use of dinitrosalicylic acid reagent for determination of reducing sugar
-
MILLER, G.L. 1959. Use of dinitrosalicylic acid reagent for determination of reducing sugar. Anal. Chem. 31: 426-428.
-
(1959)
Anal. Chem.
, vol.31
, pp. 426-428
-
-
Miller, G.L.1
-
22
-
-
3843112354
-
Complex structures of Thermoactinomyces vulgaris R-47 α-amylase 2 with acarbose and cyclodextrins demonstrate the multiple substrate recognition mechanism
-
OHTAKI, A., MIZUNO, M., TONOZUKA, T., SAKANO, Y. & KAMITORI, S. 2004. Complex structures of Thermoactinomyces vulgaris R-47 α-amylase 2 with acarbose and cyclodextrins demonstrate the multiple substrate recognition mechanism. J. Biol. Chem. 279: 31033-31040.
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 31033-31040
-
-
Ohtaki, A.1
Mizuno, M.2
Tonozuka, T.3
Sakano, Y.4
Kamitori, S.5
-
23
-
-
0005778409
-
The multisubstrate specificity and the quaternary structure of cyclodextrin-/pullulan-degrading enzymes
-
PARK, K.H. 2001. The multisubstrate specificity and the quaternary structure of cyclodextrin-/pullulan-degrading enzymes. J. Appl. Glycosci. 48: 293-299.
-
(2001)
J. Appl. Glycosci.
, vol.48
, pp. 293-299
-
-
Park, K.H.1
-
24
-
-
0034705064
-
Structure, specificity and function of cyclomaltodextrinase, a multispecific enzyme of the Q-amylase family
-
PARK, K.H., KIM, T.J., CHEONG, T.K., KIM, J.W., OH, B.H. & SVENSSON, B. 2000. Structure, specificity and function of cyclomaltodextrinase, a multispecific enzyme of the Q-amylase family. Biochim. Biophys. Acta 1478: 165-185.
-
(2000)
Biochim. Biophys. Acta
, vol.1478
, pp. 165-185
-
-
Park, K.H.1
Kim, T.J.2
Cheong, T.K.3
Kim, J.W.4
Oh, B.H.5
Svensson, B.6
-
25
-
-
0346367480
-
N- and C-terminal region mediated oligomerization of the cyclodextrin-/pullulan degrading enzymes
-
PARK, K.H., LEE, H.S., KIM, T.J., CHEONG, K.A., NGUYEN, V.D., MIN, M.J., CHO, H.Y., KIM, Y.W., PARK, C.S., OH, B.H. & KIM, J.W. 2002. N- and C-terminal region mediated oligomerization of the cyclodextrin-/pullulan degrading enzymes. Biologia, Bratislava 57 (Suppl. 11): 87-92.
-
(2002)
Biologia, Bratislava
, vol.57
, Issue.SUPPL. 11
, pp. 87-92
-
-
Park, K.H.1
Lee, H.S.2
Kim, T.J.3
Cheong, K.A.4
Nguyen, V.D.5
Min, M.J.6
Cho, H.Y.7
Kim, Y.W.8
Park, C.S.9
Oh, B.H.10
Kim, J.W.11
-
26
-
-
0037213598
-
Production of heterologous thermostable glycoside hydrolases and the presence of host-cell proteases in substrate limited fedbatch cultures of Escherichia coli BL21(DE3)
-
RAMCHURAN, S.O., NORDBERG KARLSSON, E., VELUT, S., MARÉ DE, L., HAGANDER, P. & HOLST, O. 2002. Production of heterologous thermostable glycoside hydrolases and the presence of host-cell proteases in substrate limited fedbatch cultures of Escherichia coli BL21(DE3). Appl. Microbiol. Biotechnol. 60: 408-416.
-
(2002)
Appl. Microbiol. Biotechnol.
, vol.60
, pp. 408-416
-
-
Ramchuran, S.O.1
Nordberg Karlsson, E.2
Velut, S.3
De Maré, L.4
Hagander, P.5
Holst, O.6
-
27
-
-
0041663295
-
The structure of barley α-amylase isozyme 1 reveals a novel role of domain C in substrate recognition and binding: A pair of sugar tongs
-
ROBERT, X., HASER, R., GOTTSCHALK, T.E., RATAJCZAK, F., DRIGUEZ, H., SVENSSON, B. & AGHAJARI, N. 2003. The structure of barley α-amylase isozyme 1 reveals a novel role of domain C in substrate recognition and binding: a pair of sugar tongs. Structure 11: 973-984.
-
(2003)
Structure
, vol.11
, pp. 973-984
-
-
Robert, X.1
Haser, R.2
Gottschalk, T.E.3
Ratajczak, F.4
Driguez, H.5
Svensson, B.6
Aghajari, N.7
-
28
-
-
0032052770
-
Consensus-degenerate hybrid oligonucleotide primers for amplification of distantly related sequences
-
ROSE, T.M., SCHULTZ, E.R., HENIKOFF, J.G., PIETROKOVSKI, S., MCCALLUM, C.M. & HENIKOFF, S. 1998. Consensus-degenerate hybrid oligonucleotide primers for amplification of distantly related sequences. Nucleic Acids Res. 26: 1628-1635.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 1628-1635
-
-
Rose, T.M.1
Schultz, E.R.2
Henikoff, J.G.3
Pietrokovski, S.4
McCallum, C.M.5
Henikoff, S.6
-
29
-
-
0042622380
-
SWISS-MODEL: An automated protein homology-modeling server
-
SCHWEDE, T., KOPP, J., GUEX, N. & PEITSCH, M.C. 2003. SWISS-MODEL: an automated protein homology-modeling server. Nucleic Acids Res. 31: 3381-3385.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 3381-3385
-
-
Schwede, T.1
Kopp, J.2
Guex, N.3
Peitsch, M.C.4
-
30
-
-
0346367485
-
Crystal structures and substrate specificities of two α-amylases hydrolyzing cyclodextrins and pullulan from Thermoactinomyces vulgaris R-47
-
TONOZUKA, T., YOKOTA, T., ICHIKAWA, K., MIZUNO, M., KONDO, S., NISHIKAWA, A., KAMITORI, S. & SAKANO, Y. 2002. Crystal structures and substrate specificities of two α-amylases hydrolyzing cyclodextrins and pullulan from Thermoactinomyces vulgaris R-47. Biologia, Bratislava 57 (Suppl. 11): 71-76.
-
(2002)
Biologia, Bratislava
, vol.57
, Issue.SUPPL. 11
, pp. 71-76
-
-
Tonozuka, T.1
Yokota, T.2
Ichikawa, K.3
Mizuno, M.4
Kondo, S.5
Nishikawa, A.6
Kamitori, S.7
Sakano, Y.8
-
31
-
-
0032524409
-
Optimal membrane choice for microdialysis sampling of oligosaccharides
-
TORTO, N., BÅNG, J., RICHARDSON, S., NILSSON, G.S., GORTON, L., LAURELL, T. & MARKO-VARGA, G. 1998. Optimal membrane choice for microdialysis sampling of oligosaccharides. J. Chromatogr. A806: 265-278.
-
(1998)
J. Chromatogr.
, vol.A806
, pp. 265-278
-
-
Torto, N.1
Bång, J.2
Richardson, S.3
Nilsson, G.S.4
Gorton, L.5
Laurell, T.6
Marko-Varga, G.7
-
32
-
-
0345580642
-
Technical issues of in vitro microdialysis sampling in bioprocess monitoring
-
TORTO, N. & GORTON, L. 1999. Technical issues of in vitro microdialysis sampling in bioprocess monitoring. Trends Anal. Chem. 18: 252-260.
-
(1999)
Trends Anal. Chem.
, vol.18
, pp. 252-260
-
-
Torto, N.1
Gorton, L.2
-
33
-
-
10644275363
-
Optimized expression of soluble cyclomaltodextrinase of thermophilic origin in Escherichia coli by using a soluble fusion-tag and by tuning of inducer concentration
-
TURNER, P., HOLST, O. & NORDBERG KARLSSON, E. 2005a. Optimized expression of soluble cyclomaltodextrinase of thermophilic origin in Escherichia coli by using a soluble fusion-tag and by tuning of inducer concentration. Protein Expr. Purif. 39: 54-60.
-
(2005)
Protein Expr. Purif.
, vol.39
, pp. 54-60
-
-
Turner, P.1
Holst, O.2
Nordberg Karlsson, E.3
-
34
-
-
31844451922
-
Two novel cyclodextrin degrading enzymes isolated from thermophilic bacteria have similar domain structures but differ in oligomeric state and activity profile
-
in press
-
TURNER, P., LABES, A., FRIDJONSSON, O.H., HREGGVIDSON, G.O., SCHÖNHEIT, P., KRISTJANSSON, J.K., HOLST, O. & NORDBERG KARLSSON, E. 2005b. Two novel cyclodextrin degrading enzymes isolated from thermophilic bacteria have similar domain structures but differ in oligomeric state and activity profile. J. Biosci. Bioeng. (in press).
-
(2005)
J. Biosci. Bioeng.
-
-
Turner, P.1
Labes, A.2
Fridjonsson, O.H.3
Hreggvidson, G.O.4
Schönheit, P.5
Kristjansson, J.K.6
Holst, O.7
Nordberg Karlsson, E.8
-
35
-
-
0003978810
-
Enzyme chemistry and molecular biology of amylases
-
Yamamoto, T., Kitahata, S., Ciba, S., Hiromi, K., Matsuura, Y., Minamiura, N., Nitta, Y., Shinke, R. & Yamane, K. (eds), CRC Press, Boca Raton
-
YAMAMOTO, T. 1995. Enzyme chemistry and molecular biology of amylases, pp. 81-100. In: YAMAMOTO, T., KITAHATA, S., CIBA, S., HIROMI, K., MATSUURA, Y., MINAMIURA, N., NITTA, Y., SHINKE, R. & YAMANE, K. (eds) Enzyme Chemistry and Molecular Biology of Amylases and Related Enzymes, CRC Press, Boca Raton.
-
(1995)
Enzyme Chemistry and Molecular Biology of Amylases and Related Enzymes
, pp. 81-100
-
-
Yamamoto, T.1
|