X-ray structure of Novamyl, the five-domain 'maltogenic' α-amylase from Bacillus stearothermophilus: Maltose and acarbose complexes at 1.7 Å resolution

Biochemistry

Volumn 38, Issue 26, 1999, Pages 8385-8392

  Dauter, Zbigniew ^a   Dauter, Miroslawa ^a   Brzozowski, A Marek ^a   Christensen, Søren ^a   Borchert, Torben V ^a   Beier, Lars ^a   Wilson, Keith S ^a   Davies, Gideon J ^a  

^a NONE

Author keywords

[No Author keywords available]

Indexed keywords

ACARBOSE; AMYLASE; BACTERIAL ENZYME; CARBOHYDRATE; CYCLOMALTODEXTRIN GLUCANOTRANSFERASE; GLYCOSIDASE; MALTOSE; NOVAMYL; UNCLASSIFIED DRUG;

ARTICLE; CARBOXY TERMINAL SEQUENCE; CHEMICAL STRUCTURE; COMPLEX FORMATION; ENZYME BINDING; ENZYME PURIFICATION; ENZYME STRUCTURE; GEOBACILLUS STEAROTHERMOPHILUS; NONHUMAN; PRIORITY JOURNAL; PROTEIN DEGRADATION; PROTEIN DOMAIN; STRUCTURE ANALYSIS;

BACILLUS CIRCULANS; BACILLUS STEAROTHERMOPHILUS; BACTERIA (MICROORGANISMS); GEOBACILLUS STEAROTHERMOPHILUS;

EID: 0033614827     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi990256l     Document Type: Article

References (36)

1. Henrissat, B. (1991) Biochem. J. 280, 309-316.
2. Henrissat, B., and Bairoch, A. (1993) Biochem. J. 293, 781-788.
3. Henrissat, B., and Bairoch, A. (1996) Biochem. J. 316, 695-696.
4. Henrissat, B., and Davies, G. J. (1997) Curr. Opin. Struct. Biol. 7, 637-644.
5. Robyt, J. F., and French, D. (1967) Arch. Biochem. Biophys. 122, 8-16.
6. Outtrup, H., and Norman, B. E. (1984) Starch/Staerke 36, 405-411.
7. Christophersen, C., Otzen, D. E., Norman, B. E., Christensen, S., and Schäfer, T. (1997) Starch/Staerke 50, 39-45.
8. Diderichsen, B., and Christensen, L. (1988) FEMS Microbiol. Lett. 56, 53-60.
9. Svensson, B. (1994) Plant Mol. Biol. 25, 141-157.
10. Koshland, D. E. (1953) Biol. Rev. 28, 416-436.
11. Davies, G., Sinnott, M. L., and Withers, S. G. (1997) in Comprehensive Biological Catalysis (Sinnott, M. L., Ed.) pp 119-209, Academic Press, London.
12. Jespersen, H. M., MacGregor, E. A., Sierks, M. R., and Svensson, B. (1991) Biochem. J. 280, 51-55.
13. Strokopytov, B., Penninga, D., Roseboom, H. J., Kalk, K. H., Dijkhuizen, L., and Dijkstra, B. W. (1995) Biochemistry 34, 2234-2240.
14. Brzozowski, A. M., and Davies, G. J. (1997) Biochemistry 36, 10837-10845.
15. Otwinowski, Z., and Minor, W. (1997) in Methods in Enzymology: Macromolecular Crystallography, Part A (Carter, C. W., Jr., and Sweet, R. M., Eds.) pp 307-326, Academic Press, London and New York.
16. Navaza, J. (1994) Acta Crystallogr. A50, 157-163.
17. Navaza, J., and Saludijan, P. (1997) Methods Enzymol. 276, 581-594.
18. Lawson, C. L., Montfort, v. R., Strokopytov, B., Rozeboom, H. J., Kalk, K. H., de Vries, G. E., Penninga, D., Dijkhuizen, L., and Dijkstra, B. W. (1994) J. Mol. Biol. 236, 590-600.
19. Collaborative Computational Project Number 4 (1994) Acta Crystallogr. D50, 760-763.
20. Lamzin, V. S., and Wilson, K. S. (1993) Acta Crystallogr. D49, 129-147.
21. Murshudov, G. N., Vagin, A. A., and Dodson, E. J. (1997) Acta Crystallogr. D53, 240-255.
22. Brünger, A. T. (1992) Nature 355, 472-475.
23. Engh, R. A., and Huber, R. (1991) Acta Crystallogr. A47, 392-400.
24. Ramachandran, G. N., Ramakrishnan, C., and Sasisekharan, V. (1963) J. Mol. Biol. 7, 95-99.
25. Laskowski, R. A., McArthur, M. W., Moss, D. S., and Thornton, J. M. (1993) J. Appl. Crystallogr. 26, 282-291.
26. Qian, M., Haser, R., Buisson, G., Duée, E., and Payan, F. (1994) Biochemistry 33, 6284-6294.
27. Strokopytov, B., Knegtel, R. M. A., Penninga, D., Rozeboom, H. J., Kalk, K. H., Dijkhuizen, L., and Dijkstra, B. W. (1996) Biochemistry 35, 4241-4249.
28. Boel, E., Brady, L., Brzozowski, A. M., Derewenda, Z., Dodson, G. G., Jensen, V. J., Petersen, S. B., Swift, H., Thim, L., and Woldike, H. F. (1990) Biochemistry 29, 6244-6249.
29. Davies, G. J., Wilson, K. S., and Henrissat, B. (1997) Biochem. J. 321, 557-559.
30. Aleshin, A. E., Firsov, L. M., and Honzatko, R. B. (1994) J. Biol. Chem 269, 15631-15639.
31. Gilles, C., Astier, J.-P., Marchis-Mouren, G., Cambillau, C., and Payan, F. (1996) Eur. J. Biochem. 238, 561-569.
32. Sheldrick, G. M., and Schneider, T. R. (1997) Methods Enzymol. 277, 319-343.
33. Machius, M., Wiegand, G., and Huber, R. (1995) J. Mol. Biol. 246, 545-559.
34. Davies, G., and Henrissat, B. (1995) Structure 3, 853-859.
35. Payre, N., Cottaz, S., and Driguez, H. (1995) Angew. Chem., Int. Ed. 34, 1239-1241.
36. Kraulis, P. J. (1991) J. Appl. Crystallogr. 24, 946-950.